Citrus Sinensis ID: 022335

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHccHHccccHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccEcHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccEcHHHHHHHHcHHHHHHHHccccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHHHcccccccHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mslespfkadiLKGKVALItgggsgigfeistqfgkhgasVAIMGRRKQVLDAAVSALRSLGIkavgfegdvrRQEHAKKVVESTFEHFGKLDILVNAAAGNFLvsaedlspngfrtvmdidsvGTFTMCHEALKYLkkggpgrssagggsiLNISATLHYTASWYQIHVAAAKAAVDAITRNLALewgadydirvngiapgpigdtpgmnklapdeinskardymplyklgEKWDIAMAALYLTsdtgkyvngttlivdgglwlsrprhlpkDAVKQLSRTVEkrsrdkpigvpkskl
Flexible Loop (DISEMBL)
MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIkavgfegdvrrQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSaedlspngfRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIApgpigdtpgmnKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGglwlsrprhlpKDAVKqlsrtvekrsrdkpigvpkskl
Low Complexity Region (SEG)
MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKggpgrssagggsILNISATLHYTASWYQIHvaaakaavdaITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL
Disordered region (IsUnstruct)
********ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKG*******GGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG****************ARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR********************************
Disordered Region (DISOPRED)
****SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGP*RSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPK**************************
Disordered Region (DISEMBL)
MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKD*************************
Disordered Region (DISPRO)
*******KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSR***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	299	2.2.26 [Sep-21-2011]
Q9LTV6	298	Peroxisomal 2,4-dienoyl-C	yes	no	0.993	0.996	0.791	1e-134
Q9NUI1	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.846	0.866	0.441	2e-50
Q5RBV3	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.846	0.866	0.441	4e-50
Q9WV68	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.869	0.890	0.432	3e-48
Q6NV34	300	Peroxisomal 2,4-dienoyl-C	yes	no	0.839	0.836	0.425	3e-48
Q9Z2M4	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.846	0.866	0.433	4e-46
P32573	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.839	0.859	0.402	3e-45
O34717	254	Probable 2,4-dienoyl-CoA	yes	no	0.832	0.980	0.371	2e-40
Q22230	309	Uncharacterized oxidoredu	yes	no	0.846	0.818	0.345	6e-30
Q9CQ62	335	2,4-dienoyl-CoA reductase	no	no	0.822	0.734	0.337	3e-29

>sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1

 Score =  476 bits (1225), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/298 (79%), Positives = 271/298 (90%), Gaps = 1/298 (0%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           ++SPFK D+++G+VALITGGGSGIGFEIS+QFGKHGAS+AIMGRRKQVLD AVSALRSLG
Sbjct: 1   MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I+A+G EGDVR+QE A++VVE+TF+HFGKLDILVNAAAGNFL +AEDLSPNGFRTV+DID
Sbjct: 61  IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS-ATLHYTASWYQIHVAAAKAAVDAIT 181
           +VGTF MCH ALKYLKKG PGR S+ GG  +    ATLHYTASWYQIHV+AAKAAVDA T
Sbjct: 121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           RNLALEWG DYDIRVNGIAPGPIG TPGM+KL P+EI +K R+YMPLYK+GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDIAMAA 240

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           LYL+ D+GKYV+G T++VDGGLWLS+PRHLPK+AVKQLSR VEKRSR KP+G+P SKL
Sbjct: 241 LYLSCDSGKYVSGLTMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 4

>sp|Q9NUI1|DECR2_HUMAN Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapiens GN=DECR2 PE=1 SV=1

 Score =  199 bits (507), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/265 (44%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKA 65
           F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R   +VL AA     + G + 
Sbjct: 21  FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMDID+ G
Sbjct: 81  LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query: 126 TFTMCHEAL-KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
           TF +      K+ +          GG I+NI+ATL       Q+H  +AKAAVDA+TR+L
Sbjct: 141 TFNVSRVLYEKFFRD--------HGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALY 243
           A+EWG   +IRVN +APGPI  T G+ +L  P    S      PL +LG K +IA + LY
Sbjct: 193 AVEWGPQ-NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251

Query: 244 LTSDTGKYVNGTTLIVDGGLWLSRP 268
           L S    YV G  L+ DGG WL+ P
Sbjct: 252 LASPLASYVTGAVLVADGGAWLTFP 276

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q5RBV3|DECR2_PONAB Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abelii GN=DECR2 PE=2 SV=1

 Score =  198 bits (504), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/265 (44%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKA 65
           F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R   +VL AA     + G + 
Sbjct: 21  FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMDID+ G
Sbjct: 81  LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query: 126 TFTMCHEAL-KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
           TF +      K+ +          GG I+NI+ATL       Q+H  +AKAAVDA+TR+L
Sbjct: 141 TFNVSRVLYEKFFRD--------HGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALY 243
           A+EWG   +IRVN +APGPI  T G+ +L  P    S      PL +LG K +IA + LY
Sbjct: 193 AVEWGPQ-NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251

Query: 244 LTSDTGKYVNGTTLIVDGGLWLSRP 268
           L S    YV G  L+ DGG WL+ P
Sbjct: 252 LASPLASYVTGAVLVADGGAWLTFP 276

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9WV68|DECR2_MOUSE Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus musculus GN=Decr2 PE=1 SV=1

 Score =  192 bits (487), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/275 (43%), Positives = 162/275 (58%), Gaps = 15/275 (5%)

Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKA 65
           F  D+L+ KVA ITGGGSGIGF I+  F +HG    I+GR  Q V  AA   + + G + 
Sbjct: 21  FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80

Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +    DVR        V+   + FGK++IL+N AAGNFL  A  LS N F+TV+DID++G
Sbjct: 81  LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
           TF +     K   +         GG I+NI+ATL       Q+H  AAKAAVDA+TR+LA
Sbjct: 141 TFNVSSVLYKKFFRD-------HGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLA 193

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-PLYKLGEKWDIAMAALYL 244
           +EWG   +IRVN +APG I  T G+ +L     +SK + +  P+ +LG K +IA + LYL
Sbjct: 194 VEWGPQ-NIRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVLYL 252

Query: 245 TSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQL 279
            S    YV+G  L+VDGG W++ P     + +KQL
Sbjct: 253 ASPLASYVSGIVLVVDGGSWMTFP-----NGIKQL 282

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q6NV34|DECR2_DANRE Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1

 Score =  192 bits (487), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/263 (42%), Positives = 150/263 (57%), Gaps = 12/263 (4%)

Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKA 65
           +  D+L  +VA ITGGGSGIGF I+    +HG    I  R  + +  A   L S  G + 
Sbjct: 28  YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87

Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +    DVR+ E     V+ T + FG++DIL+N AAGNFL  A  LS N F+TVM+ID++G
Sbjct: 88  LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147

Query: 126 TFTMCHEAL-KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
           TF        K+ K          GGSI+NISATL Y     Q+H  +AKAA DA+TR+L
Sbjct: 148 TFNTSKVIYDKWFKD--------HGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHL 199

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK-ARDYMPLYKLGEKWDIAMAALY 243
           A+EWG    +RVN +APGPI  T G  +L      +  A   +PL + G K ++A A L+
Sbjct: 200 AVEWGPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLF 258

Query: 244 LTSDTGKYVNGTTLIVDGGLWLS 266
           L S    YV G+ L+ DGG WL+
Sbjct: 259 LASRASSYVTGSVLVADGGAWLT 281

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9Z2M4|DECR2_RAT Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1

 Score =  185 bits (469), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/265 (43%), Positives = 159/265 (60%), Gaps = 12/265 (4%)

Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKA 65
           F  D+L+ KVA ITGGGSGIGF I+  F +HG    I+ R   +V +AA   + + G + 
Sbjct: 21  FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80

Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +    DVR        V+   + FGK+DIL+N AAGNFL  A  LS N F+TV+DID++G
Sbjct: 81  LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
           TF +     +   +         GG I+NI+ATL       Q+H  AAKAAVDA+TR+LA
Sbjct: 141 TFNVSRVLYEKFFRD-------HGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLA 193

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM--PLYKLGEKWDIAMAALY 243
           +EWG   +IRVN +APG I  T G+ +L   + +SK + Y+  P+ +LG K +IA + LY
Sbjct: 194 VEWGPQ-NIRVNSLAPGAISGTEGLRRLGGPKASSKFK-YLSSPIPRLGTKTEIAHSVLY 251

Query: 244 LTSDTGKYVNGTTLIVDGGLWLSRP 268
           L S    YV+G  L+VDGG W++ P
Sbjct: 252 LASPLASYVSGIVLVVDGGSWMTLP 276

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|P32573|SPS19_YEAST Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPS19 PE=1 SV=4

 Score =  182 bits (461), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/266 (40%), Positives = 148/266 (55%), Gaps = 15/266 (5%)

Query: 4   ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG- 62
           E  ++ D+ KGKVA +TGG   I    +      G   AI+GR ++  + A   +  L  
Sbjct: 14  EGSWRPDLFKGKVAFVTGGAGTICRVQTEALVLLGCKAAIVGRDQERTEQAAKGISQLAK 73

Query: 63  ----IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
               + A+    DVR  E  +  V+ T E FGK+D ++  AAGNF+    +LSPN F++V
Sbjct: 74  DKDAVLAIA-NVDVRNFEQVENAVKKTVEKFGKIDFVIAGAAGNFVCDFANLSPNAFKSV 132

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
           +DID +G+F      LK LKK          GSIL +SAT HY    +Q HV AAKA +D
Sbjct: 133 VDIDLLGSFNTAKACLKELKK--------SKGSILFVSATFHYYGVPFQGHVGAAKAGID 184

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
           A+ +NLA+E G    IR N IAPG I +T G+ +LA  +   KA   +PL +LG   DIA
Sbjct: 185 ALAKNLAVELGP-LGIRSNCIAPGAIDNTEGLKRLAGKKYKEKALAKIPLQRLGSTRDIA 243

Query: 239 MAALYLTSDTGKYVNGTTLIVDGGLW 264
            + +Y+ S    YV GT L+VDGG+W
Sbjct: 244 ESTVYIFSPAASYVTGTVLVVDGGMW 269

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Dispensable for growth and sporulation on solid acetate and oleate media, but is essential for these processes to occur on petroselineate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|O34717|FADH_BACSU Probable 2,4-dienoyl-CoA reductase OS=Bacillus subtilis (strain 168) GN=fadH PE=2 SV=1

 Score =  166 bits (421), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 144/256 (56%), Gaps = 7/256 (2%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           ++ K  +ITGG SG+G  ++ +  + G  V + GR  + L+     +++   +   F+ D
Sbjct: 1   MEKKAVIITGGSSGMGKAMAKKQAELGWHVMVTGRNHEALEETKKEIQTFEGQVACFQMD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR    A  +++   + FG+LD L+N AAGNF+  AE L+PNG++ V++I   GTF    
Sbjct: 61  VRSDSAASDMIKEAVKAFGRLDALINNAAGNFICPAEKLTPNGWKAVIEIVLNGTFFCSQ 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A ++             G ILN++AT  + A    +H AAAKA V ++TR LA+EWG+ 
Sbjct: 121 AAARHWI------DQKQQGVILNMAATYAWGAGAGVVHSAAAKAGVLSLTRTLAVEWGSK 174

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           Y IR N IAPGPI  T G  KL   E   ++  + +PL +LG   +IA  A +L SD   
Sbjct: 175 YGIRTNAIAPGPIERTGGAEKLFESEKAMARTMNSVPLGRLGTPEEIAALAAFLLSDEAS 234

Query: 251 YVNGTTLIVDGGLWLS 266
           Y+NG  + +DGG WL+
Sbjct: 235 YINGDCITMDGGQWLN 250

Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q22230|YVX3_CAEEL Uncharacterized oxidoreductase T05C12.3 OS=Caenorhabditis elegans GN=T05C12.3 PE=3 SV=1

 Score =  131 bits (330), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 13/266 (4%)

Query: 3   LESPFKAD-ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD-AAVSALRS 60
             SP   D  LKGKVAL+TGGG+GIG  I+T F   GASVAI  RR + L+  A   +++
Sbjct: 13  CNSPILRDGALKGKVALVTGGGTGIGKAIATTFAHLGASVAIAARRMEKLEQTAEEIMKT 72

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL-DILVNAAAGNFLVSAEDLSPNGFRTVM 119
            G     F  D++         +   + FGK  DILVN AAGNF+++ E LSPN   T++
Sbjct: 73  TGGICEPFRMDIKDPGMVSDTFDKIDKKFGKHPDILVNNAAGNFIMATERLSPNAHGTII 132

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDA 179
           DI   GT  +  E  K   +      S  G S+ +I+A    + + + +  A +KA V+ 
Sbjct: 133 DIVLKGTMNVTTELGKRCIQ------SKTGASVTSITAAYARSGAPFIVPSAVSKAGVEI 186

Query: 180 ITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE---INSKARDYMPLYKLGEKWD 236
           +T++LA EW + Y +R N ++PGPI       +L   E   +  K ++  P  + G   +
Sbjct: 187 MTKSLATEW-SKYGLRFNAVSPGPIPTKGAWGRLFSGEMGDVAEKMKELNPEGRSGTPEE 245

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGG 262
           +A    +++SD   ++NG  + +DGG
Sbjct: 246 VANLVAFISSDHMSFMNGVIIDLDGG 271

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9CQ62|DECR_MOUSE 2,4-dienoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Decr1 PE=1 SV=1

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 9/255 (3%)

Query: 10  DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGF 68
           D  +GKVA ITGGG+G+G  ++T     GA   I  R   VL A    + S  G K    
Sbjct: 55  DAFQGKVAFITGGGTGLGKAMTTFLSTLGAQCVIASRNIDVLKATAEEISSKTGNKVHAI 114

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             DVR  +     V    +  G  D+++N AAGNF+  +E L+PNG++T+ DI   GT  
Sbjct: 115 RCDVRDPDMVHNTVLELIKVAGHPDVVINNAAGNFISPSERLTPNGWKTITDIVLNGTAY 174

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +  E  K L K      +  G + L I+     + S + +  ++AK+ V+A+ ++LA EW
Sbjct: 175 VTLEIGKQLIK------AQKGAAFLAITTIYAESGSGFVMPSSSAKSGVEAMNKSLAAEW 228

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           G  Y +R N I PGPI      ++L P      +  D +P  +LG   ++A  A +L SD
Sbjct: 229 G-RYGMRFNIIQPGPIKTKGAFSRLDPTGRFEKEMIDRIPCGRLGTMEELANLATFLCSD 287

Query: 248 TGKYVNGTTLIVDGG 262
              ++NG  +  DGG
Sbjct: 288 YASWINGAVIRFDGG 302

Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	299
225462240	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.993	1.0	0.861	1e-149
388502636	297	unknown [Lotus japonicus]	0.993	1.0	0.841	1e-146
449444144	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.993	1.0	0.824	1e-144
255544592	297	2,4-dienoyl-CoA reductase, putative [Ric	0.993	1.0	0.875	1e-140
297834090	298	short-chain dehydrogenase/reductase fami	0.993	0.996	0.818	1e-140
358248016	298	uncharacterized protein LOC100793630 [Gl	0.993	0.996	0.825	1e-139
358249176	298	uncharacterized protein LOC100800885 [Gl	0.993	0.996	0.812	1e-138
388519645	275	unknown [Lotus japonicus]	0.919	1.0	0.847	1e-135
225423652	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.993	1.0	0.774	1e-135
224120278	299	predicted protein [Populus trichocarpa]	0.993	0.993	0.785	1e-135

>gi|225462240|ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|297736138|emb|CBI24176.3| unnamed protein product [Vitis vinifera]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 256/297 (86%), Positives = 278/297 (93%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPFKAD+LKGKVAL+TGGGSGIGFEISTQFG HGAS+AIMGRRKQVLD+AVS L S G
Sbjct: 1   MESPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQG 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I AVGF GDVR+QE AK+VVEST +HFG+LDILVNAAAGNFLVS+EDLSPNGFRTVMDID
Sbjct: 61  IPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
           SVGTFTMCHEALKYLKKGGPGRS + GGSILNISATLHYTA+WYQIHV+AAKAAVDA TR
Sbjct: 121 SVGTFTMCHEALKYLKKGGPGRSFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATTR 180

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           NLALEWG DYDIRVNGIAPGPIGDT GM+KLAP+EI++KAR+ MPLYKLGEKWDIAMAAL
Sbjct: 181 NLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAAL 240

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           YL SD GKY+NGTTL+VDGGLWLSRPRHLPK+AVKQLSR VEKRSR  P+GVPKSKL
Sbjct: 241 YLASDAGKYINGTTLVVDGGLWLSRPRHLPKEAVKQLSRAVEKRSRGVPVGVPKSKL 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502636|gb|AFK39384.1| unknown [Lotus japonicus]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/297 (84%), Positives = 275/297 (92%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPFK +ILKGKVALITGG SGIGFEISTQFGKHGASVA+MGRRKQVLD+AVS L+SL 
Sbjct: 1   MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I A+GF GDVR+QE A +VVESTF+HFGK+DILVNAAAGNFLVSAEDLSPNGFRTV+DID
Sbjct: 61  IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
           SVGTFTMC EALKYLKKGG GR S+G G+I+NISATLHYTASWYQIHV+AAKAAVDA TR
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGAIINISATLHYTASWYQIHVSAAKAAVDATTR 180

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           NLALEWG DYDIRVNGIAPGPI  TPGM+KLAPDEIN+K++DYMPLYK GEKWDIAMAAL
Sbjct: 181 NLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKEGEKWDIAMAAL 240

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           +L SD GKY+NG TLIVDGGLWLSRPRHLPK+AVKQ SR +EKRSR++PIGVPKSKL
Sbjct: 241 FLVSDAGKYINGDTLIVDGGLWLSRPRHLPKEAVKQASRAIEKRSRNQPIGVPKSKL 297

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444144|ref|XP_004139835.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Cucumis sativus]

 Score =  516 bits (1329), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/297 (82%), Positives = 273/297 (91%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           + SPF++DIL+GKVALITGGGSGIGFEI+TQFG+HGAS+AIMGRRKQVLD+AV+ALRSLG
Sbjct: 1   MASPFRSDILRGKVALITGGGSGIGFEIATQFGQHGASIAIMGRRKQVLDSAVAALRSLG 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I A GFEGDVR+QE A  VV+STF   G LDILVNAAAGNFLVSAEDLSPNGFRTVMDID
Sbjct: 61  ISAFGFEGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
           SVGTFTMCH+ALKYLKKGGPGR+S  GG+I+NISATLHYTA+WYQIHV+AAKAAVDAITR
Sbjct: 121 SVGTFTMCHQALKYLKKGGPGRNSLTGGTIINISATLHYTAAWYQIHVSAAKAAVDAITR 180

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           NLALEWGAD+DIRVNGIAPGPI  TPG++KLAP+EINSK R+ MPLY++GEKWDIAMAAL
Sbjct: 181 NLALEWGADHDIRVNGIAPGPIQGTPGLSKLAPEEINSKIREDMPLYRIGEKWDIAMAAL 240

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           YL SD GKYVNGTT+I DGG+WLS PR LPKDAVKQLSR VEKRSR+ P+G PKSKL
Sbjct: 241 YLASDAGKYVNGTTIIADGGMWLSSPRRLPKDAVKQLSRVVEKRSRNLPVGAPKSKL 297

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544592|ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223547265|gb|EEF48760.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/297 (87%), Positives = 281/297 (94%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPFK DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD+AVS L SL 
Sbjct: 1   MESPFKRDILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDSAVSHLNSLQ 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I +VGF GDVR+QE AK+V+ESTF+HFG++DILVNAAAGNFLVS EDLSPNGFRTVMDID
Sbjct: 61  IPSVGFVGDVRKQEDAKRVLESTFKHFGRIDILVNAAAGNFLVSPEDLSPNGFRTVMDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
           +VGTFTMCHE+LKYLK GG GRSS+GGG+ILNISATLHYTA+WYQIHV+AAKAAVDAI R
Sbjct: 121 AVGTFTMCHESLKYLKIGGLGRSSSGGGTILNISATLHYTAAWYQIHVSAAKAAVDAIAR 180

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           NLALEWG DYDIRVNGIAPGPIGDTPGM+KLAPD+INSKARDYMPLYKLGEKWDIAMAAL
Sbjct: 181 NLALEWGTDYDIRVNGIAPGPIGDTPGMSKLAPDDINSKARDYMPLYKLGEKWDIAMAAL 240

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           YL SD GK+VNGTT++VDGGLWLSRPRHLPKDAVKQLSRTVEKRSRD P+GVP SKL
Sbjct: 241 YLASDAGKFVNGTTIVVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDAPVGVPSSKL 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834090|ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 244/298 (81%), Positives = 278/298 (93%), Gaps = 1/298 (0%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPFK D+++G+VALITGGGSGIGFEIS+QFGKHGAS+AIMGRRKQVLD AVSALRSLG
Sbjct: 1   MESPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I+A+G EGDVR+QE A++VVE+T++HFG++DILVNAAAGNFL +AEDLSPNGFRTV+DID
Sbjct: 61  IQAIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGR-SSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAIT 181
           +VGTF MCH ALKYLKKGGPGR SS GGGSI+NISATLHYTASWYQIHV+AAKAAVDA T
Sbjct: 121 AVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           RNLALEWG DYDIRVNGIAPGPIG TPGM+KL P+EI +K R+YMPLYKLGEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAA 240

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           LYL+ D+GKYVNG T++VDGGLWLS+PRHLPK+AVKQLSR VEKRSR KP+G+P SKL
Sbjct: 241 LYLSCDSGKYVNGLTVVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248016|ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max] gi|255647355|gb|ACU24144.1| unknown [Glycine max]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 246/298 (82%), Positives = 271/298 (90%), Gaps = 1/298 (0%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPFK +ILKGKVALITGG SGIGFEISTQFGKHGASVA+MGRRKQVL +AVS L+SL 
Sbjct: 1   MESPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLV 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I AVGFEGDVR+QE A +VVESTF+HFG++DILVNAAAGNFLVSAEDLS NGFRTV+DID
Sbjct: 61  IPAVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRTVLDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS-ATLHYTASWYQIHVAAAKAAVDAIT 181
           SVGTFTMCHEALKYLKKGG GRS++  G  +    ATLHYTASWYQIHV+AAKAAVDA T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           RNLALEWG DYDIRVNGIAPGPI  TPGM+KLAPDEI+SKARDYMPLYKLGEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           L+L SD GK+VNG T+IVDGGLWLSRPRHL K+AVKQ+SR+VEKRSR+ P+GVPKSKL
Sbjct: 241 LFLASDAGKFVNGDTMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPKSKL 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249176|ref|NP_001240261.1| uncharacterized protein LOC100800885 [Glycine max] gi|255644975|gb|ACU22987.1| unknown [Glycine max]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/298 (81%), Positives = 269/298 (90%), Gaps = 1/298 (0%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPF+ +ILKGKVALITGG SGIGFEISTQFGKHGASVA+MGRRKQVL +AVS L+SL 
Sbjct: 1   MESPFRPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLA 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I AVGFEGDVR+QE A +VVESTF+HFG++DILVNAAAGNFLVSAEDLSPNGFRTV+DID
Sbjct: 61  IPAVGFEGDVRKQEDAVRVVESTFKHFGRIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS-ATLHYTASWYQIHVAAAKAAVDAIT 181
           SVGTFTMCHEALKYLKKGG GRS++  G  +    ATLHYTASWYQIHV+AAKAAVDA T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           RNLALEWG DYDIRVNGIAPGPI DTPGM+KLAPDEI+SKARDYMPLYKLGEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           L+L SD GK++NG  +IVDGGLWLSRPRHL K+AVKQ+SR+VE RSR+  + VPKSKL
Sbjct: 241 LFLVSDAGKFINGDIMIVDGGLWLSRPRHLAKEAVKQVSRSVENRSRNASVSVPKSKL 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519645|gb|AFK47884.1| unknown [Lotus japonicus]

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 233/275 (84%), Positives = 255/275 (92%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPFK +ILKGKVALITGG SGIGFEISTQFGKHGASVA+MGRRKQVLD+AVS L+SL 
Sbjct: 1   MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I A+GF GDVR+QE A +VVESTF+HFGK+DILVNAAAGNFLVSAEDLSPNGFRTV+DID
Sbjct: 61  IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
           SVGTFTMC EALKYLKKGG GR S+G G+I+NISATLHYTASWYQIHV+AAKAAVDA TR
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGAIINISATLHYTASWYQIHVSAAKAAVDATTR 180

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           NLALEWG DYDIRVNGIAPGPI  TPGM+KLAPDEIN+K++DYMPLYK GEKWDIAMAAL
Sbjct: 181 NLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKGGEKWDIAMAAL 240

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVK 277
           +L SD GKY+NG TLIVDGGLWLSRPRHLPK+AVK
Sbjct: 241 FLVSDAGKYINGDTLIVDGGLWLSRPRHLPKEAVK 275

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423652|ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|147772171|emb|CAN73418.1| hypothetical protein VITISV_019955 [Vitis vinifera] gi|297737992|emb|CBI27193.3| unnamed protein product [Vitis vinifera]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/297 (77%), Positives = 269/297 (90%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPF+ DILKGKVAL+TGGGSGIG+EIS Q GKHGAS+AIMGRR+QVLDAAVS+L SLG
Sbjct: 1   MESPFRGDILKGKVALLTGGGSGIGYEISRQLGKHGASIAIMGRRRQVLDAAVSSLHSLG 60

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I A+G EGDVR+QE A +V+EST +HFG+LDILVNAAAGNFLV AEDLSP GF+TV+DID
Sbjct: 61  IPAIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNFLVPAEDLSPKGFQTVIDID 120

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
           SVGTFTMCHEAL+YLKKGGPG+S + GG I+NISATLHYTA+WYQIHV+AAKAAVD+ITR
Sbjct: 121 SVGTFTMCHEALQYLKKGGPGKSPSTGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 180

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           +LALEWG DYDIRVNGIAPGPI DT G++KLAP+++  KA+++ PL+KLGEKWDIAMAA+
Sbjct: 181 SLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLGEKWDIAMAAV 240

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           YL S+ GKY+NGTTL VDGGLWLS+PRHL K+AVKQLSR VE+RSR   +GVPKSKL
Sbjct: 241 YLASNAGKYINGTTLTVDGGLWLSKPRHLSKEAVKQLSRAVERRSRKILVGVPKSKL 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120278|ref|XP_002318290.1| predicted protein [Populus trichocarpa] gi|222858963|gb|EEE96510.1| predicted protein [Populus trichocarpa]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/298 (78%), Positives = 267/298 (89%), Gaps = 1/298 (0%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +ESPFK +IL+GKVAL+TGGGSGIG+EIS Q GKHGAS+AIMGRRK V+D+AVS+L SLG
Sbjct: 2   VESPFKPEILRGKVALLTGGGSGIGYEISLQLGKHGASIAIMGRRKHVVDSAVSSLNSLG 61

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
           I A+GFEGDVR++E A +VVESTF+HFG+LDILVNAAAGNFLV +EDLS NGFRTVMDID
Sbjct: 62  IPAIGFEGDVRKREDAIRVVESTFKHFGRLDILVNAAAGNFLVPSEDLSSNGFRTVMDID 121

Query: 123 SVGTFTMCHEALKYLKKGGPGRS-SAGGGSILNISATLHYTASWYQIHVAAAKAAVDAIT 181
           SVGTFTMCHEALKYLKKGG G+  S  GG+I+NISATLHYTA+WYQIHV+AAKAAVD+IT
Sbjct: 122 SVGTFTMCHEALKYLKKGGLGKDPSTAGGTIINISATLHYTATWYQIHVSAAKAAVDSIT 181

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           RNLALEWG DYDIRVNGIAPGPIGDT GM+KL  + I SKA + MPL+K+GEKWDIAMAA
Sbjct: 182 RNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLGLEGILSKAMEKMPLFKVGEKWDIAMAA 241

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
           +YL SD GKYVNGTTL+VDGG WLS+PRH PKDAVKQLSR VEKRS+  P G+P+SKL
Sbjct: 242 VYLASDAGKYVNGTTLVVDGGEWLSKPRHFPKDAVKQLSRVVEKRSKHAPAGIPRSKL 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	299
TAIR|locus:2087770	298	SDRB "short-chain dehydrogenas	0.993	0.996	0.751	8.3e-122
TAIR|locus:3437247	156	AT2G07640 [Arabidopsis thalian	0.488	0.935	0.666	1.5e-49
UNIPROTKB|F1NG68	308	LOC100858408 "Uncharacterized	0.839	0.814	0.441	4.7e-48
MGI|MGI:1347059	292	Decr2 "2-4-dienoyl-Coenzyme A	0.869	0.890	0.4	7.1e-45
UNIPROTKB|F1PEZ3	266	DECR2 "Uncharacterized protein	0.839	0.943	0.418	1e-43
RGD|71002	292	Decr2 "2,4-dienoyl CoA reducta	0.856	0.876	0.399	1.3e-43
UNIPROTKB|Q9NUI1	292	DECR2 "Peroxisomal 2,4-dienoyl	0.849	0.869	0.412	3.5e-43
UNIPROTKB|Q5RBV3	292	DECR2 "Peroxisomal 2,4-dienoyl	0.849	0.869	0.412	5.7e-43
ZFIN|ZDB-GENE-040426-2612	300	decr2 "2,4-dienoyl CoA reducta	0.839	0.836	0.387	6.6e-42
TIGR_CMR|BA_4204	254	BA_4204 "oxidoreductase, short	0.812	0.956	0.405	7.5e-41

TAIR|locus:2087770 SDRB "short-chain dehydrogenase-reductase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
 Identities = 224/298 (75%), Positives = 257/298 (86%)

Query:     3 LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
             ++SPFK D+++G+VALITGGGSGIGFEIS+QFGKHGAS+AIMGRRKQVLD AVSALRSLG
Sbjct:     1 MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60

Query:    63 IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
             I+A+G EGDVR+QE A++VVE+TF+HFGKLDILVNAAAGNFL +AEDLSPNGFRTV+DID
Sbjct:    61 IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120

Query:   123 SVGTFTMCHEALKYLKKXX-XXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXIT 181
             +VGTF MCH ALKYLKK             I+NISATLHYTASWYQIH           T
Sbjct:   121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180

Query:   182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
             RNLALEWG DYDIRVNGIAPGPIG TPGM+KL P+EI +K R+YMPLYK+GEKWDIAMAA
Sbjct:   181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDIAMAA 240

Query:   242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDKPIGVPKSKL 299
             LYL+ D+GKYV+G T++VDGGLWLS+PRHLPK+AVKQLSR VEKRSR KP+G+P SKL
Sbjct:   241 LYLSCDSGKYVSGLTMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

TAIR|locus:3437247 AT2G07640 [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 98/147 (66%), Positives = 111/147 (75%)

Query:   129 MCHEALKYLKKXX-XXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
             MCH ALKYLKK             I+NISATLHYTAS YQIH           TRNLALE
Sbjct:     1 MCHAALKYLKKVAPGRDSSSGGGSIINISATLHYTASRYQIHVSAAKVAVDATTRNLALE 60

Query:   188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             WG DYDIRVNGIA GPIG TPGM+KL P+EI +K R+YMPLYKLGEKWDIAMAALYL+ D
Sbjct:    61 WGTDYDIRVNGIATGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAALYLSCD 120

Query:   248 TGKYVNGTTLIVDGGLWLSRPRHLPKD 274
             +GKY++G T++VDGGL LS+PRHL K+
Sbjct:   121 SGKYMSGLTMVVDGGLCLSKPRHLAKE 147

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NG68 LOC100858408 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 116/263 (44%), Positives = 153/263 (58%)

Query:     7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKA 65
             F  DIL G+VA ITGGGSGIGF I+  F +HG   AI GR +Q V+ A+   + + G + 
Sbjct:    35 FSPDILAGRVAFITGGGSGIGFRIAEIFMRHGCRTAIAGRNQQRVVQASKKLVVATGQQC 94

Query:    66 VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
             +    DVR+ +     V+ T + F ++DILVN AAGNFL  A  LS N F+TVMDID++G
Sbjct:    95 LPLSIDVRQPQTIVAAVDETLKQFKQIDILVNGAAGNFLCPASALSFNAFKTVMDIDTLG 154

Query:   126 TFTMCHEAL-KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
             TF        KY +             I+NI+ATL Y     Q+H          +TR+L
Sbjct:   155 TFNTSKVLFEKYFRDHGGV--------IINITATLSYRGQALQVHAGSAKAAIDAMTRHL 206

Query:   185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI-NSKARDYMPLYKLGEKWDIAMAALY 243
             A+EWG + +IRVN +APGPI  T G  +L      +SK  D +PL + G K +IA +ALY
Sbjct:   207 AVEWGPN-NIRVNSLAPGPITGTEGFRRLGGKFAKDSKQFDTIPLQRAGNKTEIAHSALY 265

Query:   244 LTSDTGKYVNGTTLIVDGGLWLS 266
             L S    YV GTTL+VDGG WL+
Sbjct:   266 LASPLSSYVTGTTLVVDGGSWLT 288

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

MGI|MGI:1347059 Decr2 "2-4-dienoyl-Coenzyme A reductase 2, peroxisomal" [Mus musculus (taxid:10090)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 110/275 (40%), Positives = 154/275 (56%)

Query:     7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKA 65
             F  D+L+ KVA ITGGGSGIGF I+  F +HG    I+GR  Q V  AA   + + G + 
Sbjct:    21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80

Query:    66 VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
             +    DVR        V+   + FGK++IL+N AAGNFL  A  LS N F+TV+DID++G
Sbjct:    81 LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140

Query:   126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
             TF +   ++ Y K             I+NI+ATL       Q+H          +TR+LA
Sbjct:   141 TFNV--SSVLYKK-----FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLA 193

Query:   186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-PLYKLGEKWDIAMAALYL 244
             +EWG   +IRVN +APG I  T G+ +L     +SK + +  P+ +LG K +IA + LYL
Sbjct:   194 VEWGPQ-NIRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVLYL 252

Query:   245 TSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQL 279
              S    YV+G  L+VDGG W++ P     + +KQL
Sbjct:   253 ASPLASYVSGIVLVVDGGSWMTFP-----NGIKQL 282

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=ISO

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=ISO;ISS

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO

UNIPROTKB|F1PEZ3 DECR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 110/263 (41%), Positives = 144/263 (54%)

Query:    12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
             L+ KVA ITGGGSGIGF I+  F +HG    I  R   +V  AA     + G + +    
Sbjct:     1 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSFPRVSKAARKLAAATGQRCLPLSL 60

Query:    71 DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
             DVR        V+   + FGK+DILVN AAGNFL  A  LS N F+TVMDIDS+GTF M 
Sbjct:    61 DVRAFPAITAAVDQALKEFGKIDILVNCAAGNFLCPASALSFNAFKTVMDIDSLGTFNMS 120

Query:   131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
                + Y K             I+NI+ATL       Q+H          +TR+LA+EWG 
Sbjct:   121 R--VLYEK-----FFRDHGGVIVNITATLGTRGQVLQVHAGSAKAAVDAMTRHLAVEWGP 173

Query:   191 DYDIRVNGIAPGPIGDTPGMNKLAPDE--INSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
               +IR+N +APGPI  T G  +L   +  +++K  D +PL +LG K ++A  ALYL S  
Sbjct:   174 Q-NIRINSLAPGPISGTEGFRRLGGHQASVSTKVLD-IPLQRLGNKTEVAHGALYLASPL 231

Query:   249 GKYVNGTTLIVDGGLWLSRPRHL 271
               Y+ G  L+VDGG WL+ P  L
Sbjct:   232 TSYMTGAVLVVDGGAWLTFPNDL 254

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|71002 Decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Rattus norvegicus (taxid:10116)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 107/268 (39%), Positives = 151/268 (56%)

Query:     7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKA 65
             F  D+L+ KVA ITGGGSGIGF I+  F +HG    I+ R   +V +AA   + + G + 
Sbjct:    21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80

Query:    66 VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
             +    DVR        V+   + FGK+DIL+N AAGNFL  A  LS N F+TV+DID++G
Sbjct:    81 LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140

Query:   126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
             TF +    + Y K             I+NI+ATL       Q+H          +TR+LA
Sbjct:   141 TFNVSR--VLYEK-----FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHLA 193

Query:   186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM--PLYKLGEKWDIAMAALY 243
             +EWG   +IRVN +APG I  T G+ +L   + +SK + Y+  P+ +LG K +IA + LY
Sbjct:   194 VEWGPQ-NIRVNSLAPGAISGTEGLRRLGGPKASSKFK-YLSSPIPRLGTKTEIAHSVLY 251

Query:   244 LTSDTGKYVNGTTLIVDGGLWLSRPRHL 271
             L S    YV+G  L+VDGG W++ P  +
Sbjct:   252 LASPLASYVSGIVLVVDGGSWMTLPNDI 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0006183 "GTP biosynthetic process" evidence=IEA

GO:0006228 "UTP biosynthetic process" evidence=IEA

GO:0006241 "CTP biosynthetic process" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA;ISO

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA;ISO

UNIPROTKB|Q9NUI1 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Homo sapiens (taxid:9606)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 109/264 (41%), Positives = 141/264 (53%)

Query:     7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKA 65
             F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R   +VL AA     + G + 
Sbjct:    21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query:    66 VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
             +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMDID+ G
Sbjct:    81 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query:   126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
             TF +    + Y K             I+NI+ATL       Q+H          +TR+LA
Sbjct:   141 TFNVSR--VLYEK-----FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLA 193

Query:   186 LEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYL 244
             +EWG   +IRVN +APGPI  T G+ +L  P    S      PL +LG K +IA + LYL
Sbjct:   194 VEWGPQ-NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYL 252

Query:   245 TSDTGKYVNGTTLIVDGGLWLSRP 268
              S    YV G  L+ DGG WL+ P
Sbjct:   253 ASPLASYVTGAVLVADGGAWLTFP 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IDA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IDA

UNIPROTKB|Q5RBV3 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Pongo abelii (taxid:9601)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 109/264 (41%), Positives = 141/264 (53%)

Query:     7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKA 65
             F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R   +VL AA     + G + 
Sbjct:    21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80

Query:    66 VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
             +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMDID+ G
Sbjct:    81 LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140

Query:   126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
             TF +    + Y K             I+NI+ATL       Q+H          +TR+LA
Sbjct:   141 TFNVSR--VLYEK-----FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLA 193

Query:   186 LEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYL 244
             +EWG   +IRVN +APGPI  T G+ +L  P    S      PL +LG K +IA + LYL
Sbjct:   194 VEWGPQ-NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYL 252

Query:   245 TSDTGKYVNGTTLIVDGGLWLSRP 268
              S    YV G  L+ DGG WL+ P
Sbjct:   253 ASPLASYVTGAVLVADGGAWLTFP 276

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISS

ZFIN|ZDB-GENE-040426-2612 decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Danio rerio (taxid:7955)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 102/263 (38%), Positives = 140/263 (53%)

Query:     7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKA 65
             +  D+L  +VA ITGGGSGIGF I+    +HG    I  R  + +  A   L S  G + 
Sbjct:    28 YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87

Query:    66 VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
             +    DVR+ E     V+ T + FG++DIL+N AAGNFL  A  LS N F+TVM+ID++G
Sbjct:    88 LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147

Query:   126 TFTMCHEAL-KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
             TF        K+ K             I+NISATL Y     Q+H          +TR+L
Sbjct:   148 TFNTSKVIYDKWFKDHGGS--------IVNISATLGYRGQALQVHAGSAKAANDAMTRHL 199

Query:   185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-MPLYKLGEKWDIAMAALY 243
             A+EWG    +RVN +APGPI  T G  +L      +    + +PL + G K ++A A L+
Sbjct:   200 AVEWGPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLF 258

Query:   244 LTSDTGKYVNGTTLIVDGGLWLS 266
             L S    YV G+ L+ DGG WL+
Sbjct:   259 LASRASSYVTGSVLVADGGAWLT 281

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

TIGR_CMR|BA_4204 BA_4204 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 103/254 (40%), Positives = 147/254 (57%)

Query:    12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             +K KV +ITGG SG+G  ++T+F K GA V I GR K+ L+ A   +     + +  + D
Sbjct:     1 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 60

Query:    72 VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
             VR  +  +K++E   E FG++DIL+N AAGNF+  AEDLS NG+ +V++I   GTF  C 
Sbjct:    61 VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTF-YCS 119

Query:   132 EAL-KY-LKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
             +A+ KY ++K            I+N+ AT  + A    IH          +T+ LA+EWG
Sbjct:   120 QAIGKYWIEKGIKGN-------IINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWG 172

Query:   190 ADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
               Y IRVN IAPGPI  T G +KL   +E+  +    +PL +LG   +IA  A YL SD 
Sbjct:   173 RKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDE 232

Query:   249 GKYVNGTTLIVDGG 262
               Y+NGT + +DGG
Sbjct:   233 AAYINGTCMTMDGG 246

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P32573	SPS19_YEAST	1, ., 3, ., 1, ., 3, 4	0.4022	0.8394	0.8595	yes	no
Q9NUI1	DECR2_HUMAN	1, ., 3, ., 1, ., 3, 4	0.4415	0.8461	0.8664	yes	no
Q22230	YVX3_CAEEL	1, ., -, ., -, ., -	0.3458	0.8461	0.8187	yes	no
Q5RBV3	DECR2_PONAB	1, ., 3, ., 1, ., 3, 4	0.4415	0.8461	0.8664	yes	no
Q9LTV6	DECR2_ARATH	1, ., 3, ., 1, ., 3, 4	0.7919	0.9933	0.9966	yes	no
O34717	FADH_BACSU	1, ., 3, ., 1, ., 3, 4	0.3710	0.8327	0.9803	yes	no
Q9WV68	DECR2_MOUSE	1, ., 3, ., 1, ., 3, 4	0.4327	0.8695	0.8904	yes	no
Q6NV34	DECR2_DANRE	1, ., 3, ., 1, ., 3, 4	0.4258	0.8394	0.8366	yes	no
Q9Z2M4	DECR2_RAT	1, ., 3, ., 1, ., 3, 4	0.4339	0.8461	0.8664	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3267	0.8127	0.9798	yes	no
P38004	FABG_CHLTR	1, ., 1, ., 1, ., 1, 0, 0	0.3188	0.8127	0.9798	yes	no
O05919	Y927C_MYCTU	1, ., -, ., -, ., -	0.3552	0.8060	0.9163	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.998
3rd Layer	1.3.1.34	0.994

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002063001 SubName- Full=Chromosome chr19 scaffold_126, whole genome shotgun sequence; (297 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	299
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-119
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-84
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	8e-73
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-62
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-59
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-58
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-56
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-55
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-53
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-52
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-52
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	6e-52
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	8e-51
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-50
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-46
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-46
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-46
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-45
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-44
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-44
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-44
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-44
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-44
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	3e-43
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-42
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-42
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-42
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-41
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	5e-41
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-40
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	8e-40
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	9e-40
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-39
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-39
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-39
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-39
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-38
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-38
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-38
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-38
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-38
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-38
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	6e-38
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	6e-38
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	1e-36
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-36
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-36
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	4e-36
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-36
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	8e-36
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-35
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-35
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-35
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-35
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-35
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	8e-35
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-34
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-34
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-34
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-34
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	8e-34
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	9e-34
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-33
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	6e-33
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-32
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-32
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	3e-32
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-32
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-31
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	5e-31
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	9e-31
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	9e-31
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-30
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-30
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-30
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	7e-30
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	9e-30
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-29
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-29
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	3e-29
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	5e-29
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	5e-29
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	9e-29
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-28
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-28
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-28
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-28
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-28
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-28
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	3e-28
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-28
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	5e-28
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	5e-28
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	6e-28
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-28
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	8e-28
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	9e-28
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-27
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-27
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-27
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-27
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-27
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-27
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-27
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	8e-27
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-26
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-26
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-26
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	6e-26
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-26
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	9e-26
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-25
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-25
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-25
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	8e-25
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-24
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-24
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-24
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-24
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-24
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-24
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-24
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-24
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-24
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	7e-24
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	8e-24
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-23
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-23
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-23
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-23
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	3e-23
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	7e-23
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	9e-23
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-22
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-22
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-22
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-22
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	3e-22
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-22
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-21
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-21
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-20
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-20
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	2e-20
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-20
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-20
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-20
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	4e-20
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	5e-20
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	5e-20
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-20
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	7e-20
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-20
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-19
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	1e-19
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	1e-19
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-19
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-19
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	6e-19
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-18
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-17
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	1e-17
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-17
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-17
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-17
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-17
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	6e-17
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-16
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-16
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-16
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-16
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-16
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	7e-16
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-16
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	9e-16
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-15
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-15
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-15
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-15
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	4e-15
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	7e-15
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	7e-15
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-14
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-14
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-14
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	1e-14
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-14
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	4e-14
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-14
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	4e-14
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	5e-14
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	8e-14
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	9e-14
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-13
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-13
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-13
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-13
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	4e-13
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	4e-13
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	8e-13
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	2e-12
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-12
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	7e-12
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	8e-12
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-11
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	3e-11
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-11
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	4e-11
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	5e-11
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	7e-11
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-11
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-10
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-10
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-10
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-10
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-10
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	3e-10
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	6e-10
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-09
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	1e-09
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-09
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	4e-09
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	7e-09
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-08
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-08
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-08
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	3e-08
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	7e-08
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	7e-08
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-07
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	2e-07
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	2e-07
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-07
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-07
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	3e-07
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	3e-07
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	5e-07
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	5e-07
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	5e-07
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	7e-07
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	1e-06
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-06
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-06
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	6e-06
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	8e-06
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	9e-06
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-05
pfam08659	181	pfam08659, KR, KR domain	2e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-05
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-05
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	7e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	2e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-04
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	3e-04
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-04
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	4e-04
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	6e-04
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	0.001
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	0.001
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	0.002
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	0.003
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	0.003

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  341 bits (878), Expect = e-119
 Identities = 139/256 (54%), Positives = 169/256 (66%), Gaps = 9/256 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEG 70
           LKGKVA ITGGG+GIG  I+  F + GASVAI GR+ +VL+AA   + S  G +A   + 
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DVR  E  +  V+ T + FGK+DIL+N AAGNFL  AE LSPNGF+TV+DID  GTF   
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTT 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
               K L +         GGSILNISAT  YT S +Q+H AAAKA VDA+TR+LA+EWG 
Sbjct: 121 KAVGKRLIEAKH------GGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWG- 173

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
            Y IRVN IAPGPI  T GM +LAP      K  + +PL +LG   +IA  AL+L SD  
Sbjct: 174 PYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDAA 233

Query: 250 KYVNGTTLIVDGGLWL 265
            Y+NGTTL+VDGG WL
Sbjct: 234 SYINGTTLVVDGGQWL 249

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  253 bits (648), Expect = 4e-84
 Identities = 109/252 (43%), Positives = 145/252 (57%), Gaps = 10/252 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GK  ++ GG SGI   I+  F + GA+VA+  R ++ +DAAV+ L+  G + +G   D
Sbjct: 7   FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR     +       + FG +D+LV+ AAGNF   A  +S NGF+TV+DID +GTF +  
Sbjct: 67  VRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLK 126

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A   L++  P      G SI+ ISA   +     Q HV AAKA VD +TR LALEWG +
Sbjct: 127 AAYPLLRR--P------GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPE 178

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             IRVN I PGPI  T GM +LAP  E+ +     +PL + G K DIA AAL+L SD   
Sbjct: 179 -GIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMAS 237

Query: 251 YVNGTTLIVDGG 262
           Y+ G  L VDGG
Sbjct: 238 YITGVVLPVDGG 249

Length = 264

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  224 bits (572), Expect = 8e-73
 Identities = 110/255 (43%), Positives = 150/255 (58%), Gaps = 7/255 (2%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
            KV +ITGG SG+G  ++ +F + GA+V I GR K+ L+ A   +     + +  + DVR
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             E  +K+VE   E FG++D L+N AAGNF+  AEDLS NG+ +V+DI   GTF      
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAV 120

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
            KY  + G        G+I+N+ AT  + A    IH AAAKA V A+TR LA+EWG  Y 
Sbjct: 121 GKYWIEKGI------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYG 174

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV 252
           IRVN IAPGPI  T G +KL   E    +    +PL +LG   +IA  A +L SD   Y+
Sbjct: 175 IRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYI 234

Query: 253 NGTTLIVDGGLWLSR 267
           NGT + +DGG WL++
Sbjct: 235 NGTCITMDGGQWLNQ 249

Length = 252

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  196 bits (501), Expect = 3e-62
 Identities = 92/244 (37%), Positives = 135/244 (55%), Gaps = 10/244 (4%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
           AL+TG  SGIG  I+ +  + GA V +  R ++ L     A+ +LG  AV  + DV  +E
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELA-AIEALGGNAVAVQADVSDEE 59

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             + +VE   E FG+LDILVN A        E+L+   +  V+D++  G F +   AL +
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
           +KK        GGG I+NIS+         Q   AA+KAA++ +TR+LALE  A Y IRV
Sbjct: 120 MKKQ-------GGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALEL-APYGIRV 171

Query: 197 NGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTT 256
           N +APG + DTP + KL P+E   +    +PL +LG   ++A A ++L SD   Y+ G  
Sbjct: 172 NAVAPGLV-DTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQV 230

Query: 257 LIVD 260
           + VD
Sbjct: 231 IPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  190 bits (485), Expect = 1e-59
 Identities = 90/257 (35%), Positives = 123/257 (47%), Gaps = 10/257 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+G+VAL+TG   GIG  I+ +    GA V ++        A    + + G KA   + D
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVD 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR +   K  V +  E FG+LDILV  A    L    ++    +  V+D++  GTF +  
Sbjct: 64  VRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQ 123

Query: 132 EALKYLKKGGPGRSSAGGGSILNI-SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            AL  L +       AGGG I+   S            H AA+KA +   TR LALE  A
Sbjct: 124 AALPALIR-------AGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAA 176

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             +I VN + PG + DTP    L   +        +PL +LGE  DIA A L+L SD  +
Sbjct: 177 -RNITVNSVHPGGV-DTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEAR 234

Query: 251 YVNGTTLIVDGGLWLSR 267
           Y+ G TL VDGG  L  
Sbjct: 235 YITGQTLPVDGGATLPE 251

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  187 bits (478), Expect = 1e-58
 Identities = 87/253 (34%), Positives = 131/253 (51%), Gaps = 10/253 (3%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG 70
            L+GK AL+TG   GIG  I+ +    GA V I    ++  +A  + LR+ G +A     
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +   + ++E+  E FG LDILVN A          +S   +  V+D++  GTF + 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             AL  + K       A  G I+NIS+    T +  Q + +AAKA V   T+ LALE  A
Sbjct: 122 RAALPPMIK-------ARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALEL-A 173

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
              I VN +APG I DT  M +  P+E+ ++    +PL +LG+  ++A A  +L SD   
Sbjct: 174 SRGITVNAVAPGFI-DTD-MTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAAS 231

Query: 251 YVNGTTLIVDGGL 263
           Y+ G  + V+GG+
Sbjct: 232 YITGQVIPVNGGM 244

Length = 246

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  181 bits (463), Expect = 2e-56
 Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 22/260 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVA++TG  SGIG  I+ +F   GA V +  R ++  +   + + + G +A+    D
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFTMC 130
           V  +   +  V +  E FG +DILVN A          D+    F  +  ++    +   
Sbjct: 62  VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT 121

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISAT--LHYTA--SWYQIHVAAAKAAVDAITRNLAL 186
             A+  ++         GGG+I+N+++T  L       WY     A+K AV  +T+ LA 
Sbjct: 122 QAAVPAMRG-------EGGGAIVNVASTAGLRPRPGLGWY----NASKGAVITLTKALAA 170

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAP---DEINSKARDYMPLYKLGEKWDIAMAALY 243
           E G D  IRVN +AP  + +T  +         E  +K    +PL +LG   DIA AAL+
Sbjct: 171 ELGPD-KIRVNAVAPV-VVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALF 228

Query: 244 LTSDTGKYVNGTTLIVDGGL 263
           L SD   ++ G TL+VDGG 
Sbjct: 229 LASDEASWITGVTLVVDGGR 248

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  178 bits (454), Expect = 5e-55
 Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 11/253 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL-DAAVSALRSLGIKAVGFEG 70
           L+GKVAL+TG   GIG  I+ +    GA+V I     +   +A V+ + +LG KA+  +G
Sbjct: 3   LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQG 62

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   E  ++ V+     FG +DILVN A          +    +  V+D +  G F + 
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLT 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
               + + K   GR       I+NIS+ +    +  Q + AA+KA V   T++LA E  +
Sbjct: 123 KAVARPMMKQRSGR-------IINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELAS 175

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
              I VN +APG I +T  M    P+++       +PL +LG+  +IA A  +L SD   
Sbjct: 176 -RGITVNAVAPGFI-ETD-MTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAA 232

Query: 251 YVNGTTLIVDGGL 263
           Y+ G TL V+GG+
Sbjct: 233 YITGQTLHVNGGM 245

Length = 248

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  174 bits (442), Expect = 2e-53
 Identities = 93/260 (35%), Positives = 134/260 (51%), Gaps = 20/260 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR--KQVLDAAVSALRSLG-IKAVGF 68
           L GKVAL+TG  SGIG  I+    + GA V +  RR  ++  +A  +A++  G  +A   
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 69  EGDVRRQEHA-KKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGT 126
             DV   E + + +V +  E FG++DILV NA         E+L+   +  V+D++ +G 
Sbjct: 63  AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           F +   AL  +KK            I+NIS+         Q   AA+KAA+  +T+ LAL
Sbjct: 123 FLLTRAALPLMKK----------QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALAL 172

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR--DYMPLYKLGEKWDIAMAALYL 244
           E  A   IRVN +APG I DTP    L   E+ +  R    +PL +LG   ++A A  +L
Sbjct: 173 EL-APRGIRVNAVAPGYI-DTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFL 230

Query: 245 TSDTG-KYVNGTTLIVDGGL 263
            SD    Y+ G TL VDGGL
Sbjct: 231 ASDEAASYITGQTLPVDGGL 250

Length = 251

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  172 bits (438), Expect = 1e-52
 Identities = 94/261 (36%), Positives = 133/261 (50%), Gaps = 23/261 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK AL+TGG  G+G +I+   G+ GA V +  R+ + L+ A + L +LGI A+    D
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +   +++ E T E FG +DILVN A   +   AED     +  VM+++  G F +  
Sbjct: 70  VADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQ 129

Query: 132 EALK-YLKKGGPGR-----SSAG-GGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
              K  +   G GR     S AG GG+   +  T+ Y  S         K AV   TR L
Sbjct: 130 AVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTS---------KGAVINFTRAL 180

Query: 185 ALEWGADYDIRVNGIAPG--PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           A EWG  + IRVN IAPG  P   T G  +   +++ +      PL +LG+  D+  AAL
Sbjct: 181 AAEWG-PHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHT----PLGRLGDDEDLKGAAL 235

Query: 243 YLTSDTGKYVNGTTLIVDGGL 263
            L SD  K++ G  L VDGG+
Sbjct: 236 LLASDASKHITGQILAVDGGV 256

Length = 259

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  171 bits (437), Expect = 1e-52
 Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 29/261 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVA++TG   GIG  I+    K GA V I     ++     +  ++  G  A+  + 
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +E  + +VE   E FGK+DILVN A  +      D++   +  V+D++  G   + 
Sbjct: 63  DVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLT 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNIS---------ATLHYTASWYQIHVAAAKAAVDAIT 181
             AL Y+ K          G I+NIS           + Y+AS         K AV+A T
Sbjct: 123 RYALPYMIK-------RKSGVIVNISSIWGLIGASCEVLYSAS---------KGAVNAFT 166

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           + LA E  A   IRVN +APG I DT   +  + ++    A + +PL +LG+  +IA   
Sbjct: 167 KALAKEL-APSGIRVNAVAPGAI-DTEMWSSFSEEDKEGLAEE-IPLGRLGKPEEIAKVV 223

Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
           L+L SD   Y+ G  + VDGG
Sbjct: 224 LFLASDDASYITGQIITVDGG 244

Length = 247

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  170 bits (433), Expect = 6e-52
 Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 11/256 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVAL+TG   GIGF I++   + GA++ I  R ++  + A   +   G++A  F  D
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +E  K  VE+  E FGK+DILVN A       AE+     +R V+D++  G F +  
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              +++ K        G G I+NI + L           AA+K  V  +T+ LA EW   
Sbjct: 123 AVARHMIK-------QGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWAR- 174

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           + I+VN IAPG    T     +  D E N      +P  + G+  D+  AA++L SD   
Sbjct: 175 HGIQVNAIAPGYFA-TEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDASD 233

Query: 251 YVNGTTLIVDGGLWLS 266
           YVNG  + VDGG WL+
Sbjct: 234 YVNGQIIFVDGG-WLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  167 bits (425), Expect = 8e-51
 Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 16/252 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVAL+TG   GIG  I+ +    GA VA+  R ++     V  +++LG  A   E DV  
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 75  QEHAKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +E  + +VE     FG +DILVN A     N L+    +S   +  V++++  G F +  
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDNLLMR---MSEEDWDAVINVNLTGVFNVTQ 117

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             ++ + K          G I+NIS+ +    +  Q + AA+KA V   T++LA E  A 
Sbjct: 118 AVIRAMIK-------RRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKE-LAS 169

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             I VN +APG I DT  M    P+++  K    +PL +LG   ++A A  +L SD   Y
Sbjct: 170 RGITVNAVAPGFI-DTD-MTDALPEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASY 227

Query: 252 VNGTTLIVDGGL 263
           + G  L V+GG+
Sbjct: 228 ITGQVLHVNGGM 239

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  167 bits (425), Expect = 1e-50
 Identities = 100/260 (38%), Positives = 147/260 (56%), Gaps = 18/260 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA---VSALRSLGIKAVGF 68
           LKGKVAL+TG  SGIG  I+ +    GA+V +  R K   DAA   V  ++++G KA+  
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSK--EDAAEEVVEEIKAVGGKAIAV 58

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           + DV ++E    + +S  + FG LDILVN A      S+ +++   +  V+D++  G F 
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFL 118

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALE 187
              EA+K  +K      S   G I+N+S ++H    W   ++ AA+K  V  +T+ LA E
Sbjct: 119 CAREAIKRFRK------SKIKGKIINMS-SVHEKIPWPGHVNYAASKGGVKMMTKTLAQE 171

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR--DYMPLYKLGEKWDIAMAALYLT 245
           + A   IRVN IAPG I +TP +N  A D+   +A     +P+ ++GE  +IA AA +L 
Sbjct: 172 Y-APKGIRVNAIAPGAI-NTP-INAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLA 228

Query: 246 SDTGKYVNGTTLIVDGGLWL 265
           SD   YV GTTL VDGG+ L
Sbjct: 229 SDEASYVTGTTLFVDGGMTL 248

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  157 bits (398), Expect = 1e-46
 Identities = 87/254 (34%), Positives = 128/254 (50%), Gaps = 13/254 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEG 70
           LKGKVA++TGG  GIG  I+    + GA VAI+     +  + A    +  G+K   ++ 
Sbjct: 6   LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  QE  +K  +   + FGK+DIL+  A       A D +   +  V+D++  G F   
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCA 125

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA--AAKAAVDAITRNLALEW 188
             A K  KK G        GS++  ++      +  Q   A  A+KAAV  + ++LA+EW
Sbjct: 126 QAAAKIFKKQGK-------GSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEW 178

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A Y IRVN I+PG I DT  +      E+  K   Y+PL ++    ++  A LYL SD 
Sbjct: 179 -AKYFIRVNSISPGYI-DTD-LTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASDA 235

Query: 249 GKYVNGTTLIVDGG 262
             Y  G+ LI+DGG
Sbjct: 236 SSYTTGSDLIIDGG 249

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  156 bits (396), Expect = 2e-46
 Identities = 87/253 (34%), Positives = 127/253 (50%), Gaps = 21/253 (8%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQ 75
           AL+TG   GIG  I+ +  K GA V I  R   +  +  V  L++ G+KA+G   DV  +
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 76  EHAKKVVESTFEHFGKLDILVNAA---AGNFLV--SAEDLSPNGFRTVMDIDSVGTFTMC 130
           E  K VVE   E  G +DILVN A     N L+    ED     +  V+D +  G F + 
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEED-----WDAVIDTNLTGVFNLT 115

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
              L+ + K          G I+NIS+ +    +  Q + AA+KA V   T++LA E  A
Sbjct: 116 QAVLRIMIK-------QRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKE-LA 167

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             +I VN +APG I DT   +KL  +++  K    +PL + G   ++A A  +L SD   
Sbjct: 168 SRNITVNAVAPGFI-DTDMTDKL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEAS 225

Query: 251 YVNGTTLIVDGGL 263
           Y+ G  + VDGG+
Sbjct: 226 YITGQVIHVDGGM 238

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  155 bits (393), Expect = 6e-46
 Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 13/254 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEG 70
           L G+VAL+TG   G+G  I+ +  + GA V +  R  ++  +  V A+ +LG +A   + 
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +   +  V +  E FG++DILVN A         D+S + +  V+D++  G F + 
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLL 123

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALEWG 189
              +       P      GG I+NIS ++     W  + + AAAKA +  +T+ LA E  
Sbjct: 124 RAVV-------PPMRKQRGGRIVNIS-SVAGLPGWPGRSNYAAAKAGLVGLTKALARE-L 174

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A+Y I VN +APG I DT        +   +K     PL + G   DIA A  +L SD  
Sbjct: 175 AEYGITVNMVAPGDI-DTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFLCSDAS 232

Query: 250 KYVNGTTLIVDGGL 263
            Y+ G  + V GG+
Sbjct: 233 DYITGQVIEVTGGV 246

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  153 bits (389), Expect = 2e-45
 Identities = 84/252 (33%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL+TG   GIG  I+ +  + GASV +     K   +  V+ + + G KA+  + 
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV       ++ ++  + FG +DILVN A         + S   F  +  +++ G F + 
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVL 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA K L+          GG I+NIS++L    +      A +KAAV+A TR LA E G 
Sbjct: 121 QEAAKRLR---------DGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGG 171

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
              I VN +APGP+ DT        +E         PL +LGE  DIA    +L S  G+
Sbjct: 172 R-GITVNAVAPGPV-DTDMFYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDGR 229

Query: 251 YVNGTTLIVDGG 262
           +VNG  +  +GG
Sbjct: 230 WVNGQVIRANGG 241

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  151 bits (384), Expect = 1e-44
 Identities = 91/255 (35%), Positives = 129/255 (50%), Gaps = 20/255 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TGG SGIG  I+  F   GA VA++ R + V + A   L      A G   D
Sbjct: 13  LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGG---NAKGLVCD 69

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  +  V +    FG++DILVN+A    L  AED+S   +   +DI+  G+F M  
Sbjct: 70  VSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQ 129

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI--HVA--AAKAAVDAITRNLALE 187
                    G    +AGGG I+N+++     A    +  HVA  A+KA V  +T+ LALE
Sbjct: 130 AV-------GRHMIAAGGGKIVNLAS----QAGVVALERHVAYCASKAGVVGMTKVLALE 178

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           WG  Y I VN I+P  +  T    K    E   +A+  +P  +     +IA AAL+L SD
Sbjct: 179 WGP-YGITVNAISP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASD 236

Query: 248 TGKYVNGTTLIVDGG 262
               + G  L++DGG
Sbjct: 237 AAAMITGENLVIDGG 251

Length = 255

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  151 bits (383), Expect = 2e-44
 Identities = 84/266 (31%), Positives = 124/266 (46%), Gaps = 21/266 (7%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           M      + D   GK A+ITG G+GIG EI+  F   GASV +        +  V  ++ 
Sbjct: 1   MFNSDNLRLD---GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ 57

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGN----FLVSAEDLSPNGFR 116
           LG +A     D+  ++    + +      GK+DILVN A G     F     D+    FR
Sbjct: 58  LGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPF-----DMPMADFR 112

Query: 117 TVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAA 176
              +++    F +       ++K        GGG IL I++      +      A++KAA
Sbjct: 113 RAYELNVFSFFHLSQLVAPEMEK-------NGGGVILTITSMAAENKNINMTSYASSKAA 165

Query: 177 VDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD 236
              + RN+A + G   +IRVNGIAPG I      + + P EI  K   + P+ +LG+  D
Sbjct: 166 ASHLVRNMAFDLGEK-NIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTPIRRLGQPQD 223

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGG 262
           IA AAL+L S    +V+G  L V GG
Sbjct: 224 IANAALFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  151 bits (382), Expect = 2e-44
 Identities = 81/257 (31%), Positives = 130/257 (50%), Gaps = 15/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+VA++TG GSGIG   +  F + GA V +  R  +  +   +A+ + G +A   +GD
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   E  + +V+     +G+LD+LVN A      +        +  VM ++  G F    
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAK 121

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A+  +++        GGGSI+N ++ L       +    A+K A+ ++TR +AL+   D
Sbjct: 122 YAIPIMQR-------QGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATD 174

Query: 192 YDIRVNGIAPGPIGDTPGMNKL-----APDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
             IRVN +APG I DTP   ++      P+ +    R   P+ + G   ++A AAL+L S
Sbjct: 175 -GIRVNAVAPGTI-DTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS 232

Query: 247 DTGKYVNGTTLIVDGGL 263
           D   +  GTTL+VDGG 
Sbjct: 233 DESSFATGTTLVVDGGW 249

Length = 252

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  150 bits (381), Expect = 4e-44
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 12/257 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEG 70
           L+GKV +ITGG +G+G  ++ +FGK  A V I  R  ++  +     ++  G +A+  +G
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     ++++  + FG LD+++N A     V + ++S   +  V++ +  G F   
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS 124

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALEWG 189
            EA+KY  +          G+I+N+S ++H    W   +H AA+K  V  +T  LA+E+ 
Sbjct: 125 REAIKYFVEHDI------KGNIINMS-SVHEQIPWPLFVHYAASKGGVKLMTETLAMEY- 176

Query: 190 ADYDIRVNGIAPGPIGDTP-GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           A   IRVN I PG I +TP    K A  +  +     +P+  +G+  +IA  A +L S  
Sbjct: 177 APKGIRVNNIGPGAI-NTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE 235

Query: 249 GKYVNGTTLIVDGGLWL 265
             YV G TL  DGG+ L
Sbjct: 236 ASYVTGITLFADGGMTL 252

Length = 261

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  150 bits (380), Expect = 4e-44
 Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 21/254 (8%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA---VSALRSLGIKAVGFEGDVR 73
           AL+TGG  GIG  I+ +  + GA V I  R+    DAA    + +  LG KAV    DV 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKS--KDAAAEVAAEIEELGGKAVVVRADVS 58

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
           + +  +++  +  E FG+LD+LV+ AA        +L+P  +   M+ +         +A
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQA 118

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH----VAAAKAAVDAITRNLALEWG 189
            K +++        GGG I+ IS       S   +     V  AKAA++A+ R LA+E G
Sbjct: 119 AKLMRE-------RGGGRIVAIS----SLGSIRALPNYLAVGTAKAALEALVRYLAVELG 167

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
               IRVN ++PG I      +    +++   A    P  ++G   D+A A  +L SD  
Sbjct: 168 -PRGIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAA 226

Query: 250 KYVNGTTLIVDGGL 263
           + + G TL+VDGGL
Sbjct: 227 RMITGQTLVVDGGL 240

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  148 bits (375), Expect = 3e-43
 Identities = 79/254 (31%), Positives = 117/254 (46%), Gaps = 15/254 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK AL+TG   G+G   +    + GA+VA             +AL + G +A     D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      ++  ++     G LD LVN A      SA +L  + +  VM+++  GTF M  
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLR 124

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV---AAAKAAVDAITRNLALEW 188
            AL +L+         G G I+N+++    TA W    +    A+K AV  +TR+LA E 
Sbjct: 125 AALPHLRDS-------GRGRIVNLASD---TALWGAPKLGAYVASKGAVIGMTRSLAREL 174

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           G    I VN IAPG    T     +  DE ++       L +L    D+A A L+L SD 
Sbjct: 175 GGR-GITVNAIAPGLT-ATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDA 232

Query: 249 GKYVNGTTLIVDGG 262
            ++V G  L V+GG
Sbjct: 233 ARFVTGQLLPVNGG 246

Length = 250

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  147 bits (372), Expect = 1e-42
 Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 23/264 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G   L+TGG SGIG  I+  F + GA V +    +  L A  + L   G K      D
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAKVTATVAD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA--EDLSPNGFRTVMDIDSVGTFTM 129
           V      ++V ++  E FG LD+LVN  AG    +   ++++P  +   + ++  G F  
Sbjct: 67  VADPAQVERVFDTAVERFGGLDVLVN-NAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYF 125

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
              A+  LK  G       GG I+ +S+         +   AA+K AV  + ++LA+E G
Sbjct: 126 ARAAVPLLKASGH------GGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG 179

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR----------DYMPLYKLGEKWDIAM 239
               IRVN I PG +   P M ++                    + + L ++ E  DIA 
Sbjct: 180 -PLGIRVNAILPGIV-RGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAA 237

Query: 240 AALYLTSDTGKYVNGTTLIVDGGL 263
            AL+L S   +Y+ G  + VDG +
Sbjct: 238 TALFLASPAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  145 bits (368), Expect = 3e-42
 Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 16/258 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE-- 69
           L GKVA+ITG  SGIG   +  F + GA +A+ GR  + L+    +    G+        
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 70  -GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+  +E   +++ +T   FG+LDILVN A        ED     +  VM+++      
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIY 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +   A+ +L K          G I+N+S+     +    ++   +KAA+D  TR  ALE 
Sbjct: 121 LTKLAVPHLIK--------TKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALEL 172

Query: 189 GADYDIRVNGIAPG----PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            A   +RVN ++PG          GM +    +  S+A++  PL + G   ++A A  +L
Sbjct: 173 -APKGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFL 231

Query: 245 TSDTGKYVNGTTLIVDGG 262
            SD   ++ G  L VDGG
Sbjct: 232 ASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  145 bits (367), Expect = 4e-42
 Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 20/256 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVA++TGG  G+G   +      GA V +     +   AA      LG  A  F  D
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAA---AELGDAARFFHLD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++    VV++  E FG+LD+LVN A      + E  +   +R ++DI+  G F    
Sbjct: 60  VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTR 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA----AAKAAVDAITRNLALE 187
             +  +K+       AGGGSI+N+S+                  A+K AV  +T++ ALE
Sbjct: 120 AVIPPMKE-------AGGGSIINMSS----IEGLVGDPALAAYNASKGAVRGLTKSAALE 168

Query: 188 WG-ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
                Y IRVN + PG I  TP  ++L   +         P+ + GE  +IA A +YL S
Sbjct: 169 CATQGYGIRVNSVHPGYIY-TPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLAS 227

Query: 247 DTGKYVNGTTLIVDGG 262
           D   +V G+ L+VDGG
Sbjct: 228 DESSFVTGSELVVDGG 243

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  143 bits (363), Expect = 2e-41
 Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 30/266 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGK+ALITG   GIGF I+  + K GA++      ++++D  ++A R LGI+A G+  D
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++  + +V    +  G +DILVN A     +   ++S   FR V+DID    F +  
Sbjct: 68  VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVS- 126

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATL----HYTASWYQIHVAAAKAAVDAITRNLALE 187
                 K   P     G G I+NI + +      T S Y    AAAK  +  +T+N+A E
Sbjct: 127 ------KAVIPSMIKKGHGKIINICSMMSELGRETVSAY----AAAKGGLKMLTKNIASE 176

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKL----------GEKWDI 237
           +G + +I+ NGI PG I  TP   + AP           P  +           G+  D+
Sbjct: 177 YG-EANIQCNGIGPGYIA-TP---QTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDL 231

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGL 263
           A  A++L SD   +VNG  L VDGG+
Sbjct: 232 AGPAVFLASDASNFVNGHILYVDGGI 257

Length = 265

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  142 bits (360), Expect = 5e-41
 Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 17/257 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK AL+TGG  GIG+ I  +    GA V    R ++ LD  ++  R  G K  G   D
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63

Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V  +   ++++++   HF GKL+ILVN A  N    A+D +   +  +M  +    + + 
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLS 123

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A   LK       ++G G+I+ IS+     A        A K A++ +TR+LA EW A
Sbjct: 124 RLAHPLLK-------ASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEW-A 175

Query: 191 DYDIRVNGIAPG----PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
             +IRVN +AP     P+ +     K   D++  +     PL + GE  ++A    +L  
Sbjct: 176 KDNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERT----PLKRFGEPEEVAALVAFLCM 231

Query: 247 DTGKYVNGTTLIVDGGL 263
               Y+ G  + VDGGL
Sbjct: 232 PAASYITGQIIAVDGGL 248

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  140 bits (355), Expect = 3e-40
 Identities = 73/266 (27%), Positives = 121/266 (45%), Gaps = 31/266 (11%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           GKVAL+T   SGIG  I+    + GA VAI  R ++ L+ A S LR+ G   +    D+ 
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             E   ++VE   + FG++DILVN A G       +L+   +    D+  +    +    
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAV 120

Query: 134 LKYLKKGGPGRSSAGGGSILNISATL------HYTASWYQIHVAAAKAAVDAITRNLALE 187
           L  +K+        G G I+NIS+        +   S        A+A +  + + L+ E
Sbjct: 121 LPGMKE-------RGWGRIVNISSLTVKEPEPNLVLS------NVARAGLIGLVKTLSRE 167

Query: 188 WGADYDIRVNGIAPGPIGDTPGM----------NKLAPDEINSKARDYMPLYKLGEKWDI 237
             A   + VN + PG I DT  +            ++ +E   +    +PL ++G+  ++
Sbjct: 168 -LAPDGVTVNSVLPGYI-DTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEEL 225

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGL 263
           A    +L S+   Y+ G  ++VDGGL
Sbjct: 226 AALIAFLASEKASYITGQAILVDGGL 251

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  139 bits (351), Expect = 8e-40
 Identities = 83/260 (31%), Positives = 128/260 (49%), Gaps = 19/260 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
             GKVAL+TG   GIG  I+ +  + G  +A+   R ++  +     + +LG KA+  + 
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKA 61

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +V   E  K++     E FG+LD+ VN AA   L  A +L  + +   M+I++       
Sbjct: 62  NVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCA 121

Query: 131 HEALKYLKKGGPGR----SSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
            EA K ++K G G+    SS G    L      +YT       V  +KAA++A+TR LA+
Sbjct: 122 QEAAKLMEKVGGGKIISLSSLGSIRYLE-----NYTT------VGVSKAALEALTRYLAV 170

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAALYLT 245
           E  A   I VN ++ G + DT  +      +E+   AR   P  ++ E  D+A A L+L 
Sbjct: 171 EL-APKGIAVNAVSGGAV-DTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLC 228

Query: 246 SDTGKYVNGTTLIVDGGLWL 265
           S     + G T+IVDGG  L
Sbjct: 229 SPEADMIRGQTIIVDGGRSL 248

Length = 250

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  140 bits (354), Expect = 9e-40
 Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 35/275 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVA+ITGGG  +G  ++ +  + GA VAI+ R ++  +A V+ +++ G +A+  + D
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGN----------FLVSAE-----DLSPNGFR 116
           V  +E  ++  +   E FG  DIL+N A GN            +        DL   GF 
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 117 TVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAA 176
            V D++ +GT        K +           GG+I+NIS+   +T        +AAKAA
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDM-------VGRKGGNIINISSMNAFTPLTKVPAYSAAKAA 180

Query: 177 VDAITRNLALEWGADYDIRVNGIAPG-PIGDTPGMNK---LAPD----EINSKARDYMPL 228
           +   T+ LA+ + A   IRVN IAPG  + +    N+      D    E  +K   + P+
Sbjct: 181 ISNFTQWLAVHF-AKVGIRVNAIAPGFFLTE---QNRALLFNEDGSLTERANKILAHTPM 236

Query: 229 YKLGEKWDIAMAALYLTSDTG-KYVNGTTLIVDGG 262
            + G+  ++    L+L  +    +V G  L VDGG
Sbjct: 237 GRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  139 bits (351), Expect = 1e-39
 Identities = 83/263 (31%), Positives = 115/263 (43%), Gaps = 11/263 (4%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           MS+   F    L G+VAL+TG   G+GFEI+      GA V + GR    L+AAV+ALR+
Sbjct: 1   MSILQRFS---LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA 57

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
            G  A     D+  +E             G+LDILVN           +L     R +++
Sbjct: 58  AGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLE 117

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAI 180
            D V    +   A + +K+ G GR       I+ I++     A        AAK  +  +
Sbjct: 118 TDLVAPILLSRLAAQRMKRQGYGR-------IIAITSIAGQVARAGDAVYPAAKQGLTGL 170

Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
            R LA E+G  + I  N IAPG           A   +        PL + G   +IA A
Sbjct: 171 MRALAAEFGP-HGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGA 229

Query: 241 ALYLTSDTGKYVNGTTLIVDGGL 263
           A++L S    YVNG  L VDGG 
Sbjct: 230 AVFLASPAASYVNGHVLAVDGGY 252

Length = 256

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  138 bits (351), Expect = 1e-39
 Identities = 91/259 (35%), Positives = 135/259 (52%), Gaps = 12/259 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA+ITG  SGIG   +  F + GA V +  RR+  LD  V+ +R+ G +AV   GD
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           VR + +AK +V    E FG LDI  N A     +    ++S  G+R  +  +    F   
Sbjct: 64  VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFL-- 121

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNLALEWG 189
               K+     P   + GGGS++  S  + +TA +  +   AA+KA +  +T+ LA E+G
Sbjct: 122 --GAKHQI---PAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYG 176

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           A   IRVN + PG   DTP    +    E  +       L ++ +  +IA AAL+L SD 
Sbjct: 177 AQ-GIRVNALLPGGT-DTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDA 234

Query: 249 GKYVNGTTLIVDGGLWLSR 267
             +V GT L+VDGG+ ++R
Sbjct: 235 ASFVTGTALLVDGGVSITR 253

Length = 254

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  138 bits (351), Expect = 1e-39
 Identities = 90/257 (35%), Positives = 132/257 (51%), Gaps = 14/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA--LRSLGIKAVGFE 69
           LKGK ALITGG SGIG  ++  F + GA VAI    ++  DA  +   +   G K +   
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIP 83

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFT 128
           GD+  +   + +V+   + FGKLDILVN AA      S ED++          +    F 
Sbjct: 84  GDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFY 143

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +   AL +LKK         G SI+N ++   Y  S + +  AA K A+ A TR L+L+ 
Sbjct: 144 LTKAALPHLKK---------GSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQL 194

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A+  IRVN +APGPI  TP +    P+E  S+    +P+ + G+  ++A A ++L S  
Sbjct: 195 -AEKGIRVNAVAPGPIW-TPLIPSSFPEEKVSEFGSQVPMGRAGQPAEVAPAYVFLASQD 252

Query: 249 GKYVNGTTLIVDGGLWL 265
             YV G  L V+GG  +
Sbjct: 253 SSYVTGQVLHVNGGEII 269

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  137 bits (346), Expect = 4e-39
 Identities = 84/248 (33%), Positives = 128/248 (51%), Gaps = 10/248 (4%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ 75
           VA++TGG +GIG  I+    K GASV I   + +  +A  +A++  G +A+G E +V  +
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 76  EHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           +  + VV++T   FG + ILV NA  G        ++   F     ++    F +     
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
            +++K       AGGG+ILNIS+      +       ++KAAV+ +TRNLA + G    I
Sbjct: 121 PHMQK-------AGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPK-GI 172

Query: 195 RVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNG 254
           RVN +APG +  T  +  +   EI      + PL +LGE  DIA AAL+L S    +V+G
Sbjct: 173 RVNAVAPGAV-KTDALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSG 231

Query: 255 TTLIVDGG 262
             L V GG
Sbjct: 232 QVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  136 bits (344), Expect = 1e-38
 Identities = 81/265 (30%), Positives = 118/265 (44%), Gaps = 32/265 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
           L G+ ALITG   GIG  I+ +F   GA V I+ R    L  A   L       +  G  
Sbjct: 7   LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV   E  + +++   +H+  L ILVN A GN   +A D + + +R + + +    F +
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFEL 126

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNI---SATLHY-TASWYQIHVAAAKAAVDAITRNLA 185
              A   LK+           +I+NI   S   H  + + Y       KAA+  +TRNLA
Sbjct: 127 SRYAHPLLKQ-------HASSAIVNIGSVSGLTHVRSGAPY----GMTKAALLQMTRNLA 175

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-------PLYKLGEKWDIA 238
           +EW  D  IRVN +AP  I  TP  +    D       DY        P+ ++GE  ++A
Sbjct: 176 VEWAED-GIRVNAVAPWYI-RTPLTSGPLSDP------DYYEQVIERTPMRRVGEPEEVA 227

Query: 239 MAALYLTSDTGKYVNGTTLIVDGGL 263
            A  +L      Y+ G  + VDGG 
Sbjct: 228 AAVAFLCMPAASYITGQCIAVDGGF 252

Length = 257

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  136 bits (344), Expect = 1e-38
 Identities = 88/260 (33%), Positives = 125/260 (48%), Gaps = 27/260 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK ALITGG SGIG E + QF   GA VAI GR    L+A   A   LG  A+    D
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEA---ARAELGESALVIRAD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDIL-VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
                  K + ++  E FG+LD + +NA    F    ED     F    + +  G + + 
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFA-PLEDWDEAMFDRSFNTNVKGPYFLI 119

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHY---TASWYQIHVAAAKAAVDAITRNLALE 187
              L  L       +S     +LN S   H     +S Y    AA+KAA+ ++ + L+ E
Sbjct: 120 QALLPLLANP----ASI----VLNGSINAHIGMPNSSVY----AASKAALLSLAKTLSGE 167

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKL-----APDEINSKARDYMPLYKLGEKWDIAMAAL 242
                 IRVN ++PGP+  TP   KL       D + ++ +  +PL + G   +IA A L
Sbjct: 168 L-LPRGIRVNAVSPGPV-QTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVL 225

Query: 243 YLTSDTGKYVNGTTLIVDGG 262
           YL SD   ++ G+ +IVDGG
Sbjct: 226 YLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  135 bits (342), Expect = 2e-38
 Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 30/262 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVA++TG GSG G  I+ +F + GA V I        D A      +G  A+  + D
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINA---DGAERVAADIGEAAIAIQAD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V ++   + +VE+    FG+LDILVN A          ++    F  V  ++    +   
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-------WYQIHVAAAKAAVDAITRN 183
              + ++++ G       GG I+NI++T             WY     A+K  V   T+ 
Sbjct: 120 QALVPHMEEQG-------GGVIINIAST---AGLRPRPGLTWYN----ASKGWVVTATKA 165

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNK-LAPD--EINSKARDYMPLYKLGEKWDIAMA 240
           +A+E     +IRVN + P   G+TP ++  +  D  E  +K R  +PL +L    DIA A
Sbjct: 166 MAVELAPR-NIRVNCLCP-VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANA 223

Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
           ALYL SD   ++ G  L VDGG
Sbjct: 224 ALYLASDEASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 2e-38
 Identities = 84/252 (33%), Positives = 117/252 (46%), Gaps = 8/252 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  +VA++TG G G+G  I+  F + GA V I  R +  LD     +R+ G +A     D
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   E    +     E FG+LDI+VN   G         S          +      +  
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A+  + +       +GGGS++NIS+T+   A         AKAA+   TR  AL+    
Sbjct: 128 AAVPLMLE------HSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP- 180

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             IRVN IAPG I  +      A DE+ +      PL +LG+  DIA AA+YL S  G Y
Sbjct: 181 -RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSY 239

Query: 252 VNGTTLIVDGGL 263
           + G TL VDGGL
Sbjct: 240 LTGKTLEVDGGL 251

Length = 263

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 3e-38
 Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 22/259 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
           L G+VA +TG GSGIG  I+    + GA VA+   R    L      + + G +A+    
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAA 65

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +   +  V  T    G L + VNAA       AE++    ++TVMDI+  G F  C
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSC 125

Query: 131 H-EALKYLKKGGPGRSSAGGGSILNISATLHYTAS---WYQIHVAAAKAAVDAITRNLAL 186
             EA   L+         GGGSI+NI A++          Q H  A+KA V  ++++LA+
Sbjct: 126 QAEARAMLEN--------GGGSIVNI-ASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAM 176

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY---MPLYKLGEKWDIAMAALY 243
           EW     IRVN I+PG    TP MN     E+  + + +    P+ ++ +  ++   A++
Sbjct: 177 EW-VGRGIRVNSISPGYTA-TP-MNTRP--EMVHQTKLFEEQTPMQRMAKVDEMVGPAVF 231

Query: 244 LTSDTGKYVNGTTLIVDGG 262
           L SD   +  G  L+VDGG
Sbjct: 232 LLSDAASFCTGVDLLVDGG 250

Length = 254

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  134 bits (339), Expect = 4e-38
 Identities = 80/258 (31%), Positives = 114/258 (44%), Gaps = 19/258 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVA++TG G+GIG   + +  + GA V +         AA + +  +   A+    D
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADID---GGAAQAVVAQIAGGALALRVD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMC 130
           V  ++    + E   E FG LD+LVN A    L  A  D     +   M I+  GTF  C
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A        P   + GGGSI+N+S+    +         A+KAA+  +TR LA E   
Sbjct: 118 RHAA-------PRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRH 170

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEIN---SKARDYMPLYK---LGEKWDIAMAALYL 244
              IR N +APG I DTP +                  +       LG   D+A A ++L
Sbjct: 171 A-GIRCNALAPGLI-DTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFL 228

Query: 245 TSDTGKYVNGTTLIVDGG 262
            SD   ++ G  L VDGG
Sbjct: 229 LSDDASFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  134 bits (339), Expect = 6e-38
 Identities = 89/257 (34%), Positives = 127/257 (49%), Gaps = 12/257 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TG  +G+G  I+    + GA +   GR +         + +LG + +    D
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTAD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   E  K +V+S  E FG +DILVN A       AE+ S   +  VM+++    F +  
Sbjct: 61  LSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A K+  K G       GG I+NI++ L +          A+K AV  +T+ LA EW A 
Sbjct: 121 AAAKHFLKQG------RGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEW-AA 173

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             I VN IAPG +  T     L  DE  + A  + +P  + G   DI   A++L S    
Sbjct: 174 KGINVNAIAPGYM-ATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASD 232

Query: 251 YVNGTTLIVDGGLWLSR 267
           YVNG TL VDGG WL+R
Sbjct: 233 YVNGYTLAVDGG-WLAR 248

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 6e-38
 Identities = 80/260 (30%), Positives = 122/260 (46%), Gaps = 18/260 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
           L GKVAL+TG   GIG  I+  F + GA+VA+      + + A +A+     G + +   
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV         V +  E FG LD+LVN A  N       ++   +R    +D  G +  
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNG 124

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
           C   L       PG    G GSI+NI++T  +           AK  +  +TR L +E+ 
Sbjct: 125 CRAVL-------PGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEY- 176

Query: 190 ADYDIRVNGIAPGPIGDTP----GMNKLAPDEINSKAR--DYMPLYKLGEKWDIAMAALY 243
           A  ++RVN IAPG I +T       N   PD   ++A      P+ ++G   ++AM A++
Sbjct: 177 AARNVRVNAIAPGYI-ETQLTEDWWNA-QPDPAAARAETLALQPMKRIGRPEEVAMTAVF 234

Query: 244 LTSDTGKYVNGTTLIVDGGL 263
           L SD   ++N T + +DGG 
Sbjct: 235 LASDEAPFINATCITIDGGR 254

Length = 260

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  131 bits (331), Expect = 1e-36
 Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 24/262 (9%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           GK AL+TG  SGIG  I+      GA+V +    ++  +AA       G   +    DV 
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
           +++    ++ +    FG LDILVN A    +   E+  P  +  ++ +     F     A
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAA 120

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           L ++KK G GR       I+NI++     AS ++    AAK  +  +T+ LALE  A++ 
Sbjct: 121 LPHMKKQGWGR-------IINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALE-VAEHG 172

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKAR-------------DYMPLYKLGEKWDIAMA 240
           I VN I PG +  TP + K   D+  +K R                P  +     ++A  
Sbjct: 173 ITVNAICPGYV-RTPLVEKQIADQ--AKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAET 229

Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
           ALYL SD    + G  +++DGG
Sbjct: 230 ALYLASDAAAQITGQAIVLDGG 251

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 1e-36
 Identities = 87/257 (33%), Positives = 126/257 (49%), Gaps = 15/257 (5%)

Query: 9   ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVS--ALRSLGIKAV 66
           +  LKGKVALITGG SGIG  ++  F K GA +AI+   +   DA  +   +   G+K +
Sbjct: 41  SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHE-DANETKQRVEKEGVKCL 99

Query: 67  GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVG 125
              GDV  +   K  VE T    G+LDILVN AA  +   + ED++          +   
Sbjct: 100 LIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYS 159

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
            F M   AL +LK+         G +I+N  +   Y  +   I  +A K A+ A TR+LA
Sbjct: 160 YFHMTKAALPHLKQ---------GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLA 210

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
                   IRVN +APGPI  TP +     +E  S+     P+ + G+  ++A A ++L 
Sbjct: 211 QSL-VQKGIRVNAVAPGPIW-TPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLA 268

Query: 246 SDTGKYVNGTTLIVDGG 262
           S    Y+ G  L V+GG
Sbjct: 269 SPDSSYITGQMLHVNGG 285

Length = 290

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 1e-36
 Identities = 88/262 (33%), Positives = 123/262 (46%), Gaps = 20/262 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVAL+TG  SGIG EI+    K GA V I     +   AA  AL+  G KA+G   D
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +E     ++   E FG +DILVN A    +   ED     ++ ++ I   G F    
Sbjct: 62  VTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTK 121

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            AL  +K         GGG I+N+++      S  +    +AK  +  +T+ +ALE GA 
Sbjct: 122 AALPIMKA-------QGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALE-GAT 173

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-------RDYM----PLYKLGEKWDIAMA 240
           + + VN I PG + DTP + K  PD    +         D +    P  +     +IA  
Sbjct: 174 HGVTVNAICPGYV-DTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADY 232

Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
           AL+L S   K V G   +VDGG
Sbjct: 233 ALFLASFAAKGVTGQAWVVDGG 254

Length = 258

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  129 bits (327), Expect = 4e-36
 Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 30/272 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK KVA+ITGG   +G  ++    + GA VA +GR ++  D     + +LG +A+    D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGN--------------FLVSAEDLSPNGFRT 117
           V  +   ++  E     FG +DIL+N A GN                 +  DL   G+  
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 118 VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAV 177
           V D++  G+F       K + +         GGSI+NIS+   ++        +AAKAAV
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLE-------QKGGSIINISSMNAFSPLTKVPAYSAAKAAV 175

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL------APDEINSKARDYMPLYKL 231
              T+ LA+E+ A   +RVN IAPG    TP   KL      +  + ++K     P+ + 
Sbjct: 176 SNFTQWLAVEF-ATTGVRVNAIAPG-FFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRF 233

Query: 232 GEKWDIAMAALYLTSDT-GKYVNGTTLIVDGG 262
           G+  ++  A L+L S+    +V G  + VDGG
Sbjct: 234 GKPEELLGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  129 bits (325), Expect = 6e-36
 Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 15/256 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMG----RRKQVLDAAVSALRSLGIKAVG 67
           L  +  LITGG  G+G  I+ +    GA V ++     R +   DA  + + + G KA+G
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              DVR     +  +++  E FG+LDILVN A      +  +LS   +  V+D++  G F
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFF 123

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +   AL  + +         GG I+NI++      +  Q++ AA+KA +  +T+ LA E
Sbjct: 124 NVTQAALPPMIRAR------RGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANE 177

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   I VN +APG I +TP  +  AP E      + +P+ +LGE  ++A    +L SD
Sbjct: 178 L-APRGITVNAVAPGAI-NTPMADNAAPTE---HLLNPVPVQRLGEPDEVAALVAFLVSD 232

Query: 248 TGKYVNGTTLIVDGGL 263
              YV G  + VDGG 
Sbjct: 233 AASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  128 bits (324), Expect = 8e-36
 Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 28/264 (10%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGD 71
           + K+ LITG    IG          GA + +       L+     L +L   + +  E D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA---EDLSPNGFRTVMDIDSVGTFT 128
           +  +E  K+++ES  E FG++DIL+N A  +  V     E+     +  V++++  G F 
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATL--------HYTASWYQ--IHVAAAKAAVD 178
                +K  KK        G GSI+NI++           Y  +     +  +  KA + 
Sbjct: 121 CSQAFIKLFKK-------QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGII 173

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
            +T+ LA  + AD  IRVN I+PG I +    N+  P E   K     PL ++    D+ 
Sbjct: 174 HLTKYLAKYY-ADTGIRVNAISPGGILN----NQ--PSEFLEKYTKKCPLKRMLNPEDLR 226

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
            A ++L SD   YV G  L++DGG
Sbjct: 227 GAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  128 bits (324), Expect = 1e-35
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 20/253 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
           L G+V L+TGG  GIG  I+  F   GA+V + GRR  + +D   +   +          
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAA--------- 54

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DVR  +    +V++  E  G+LD+LVN A G+    A + SP     +++++ +    + 
Sbjct: 55  DVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVA 114

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A   +++        GGGSI+NI +      S       AAKA +  +TR+LA+EW  
Sbjct: 115 QAANAVMQQ------QPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP 168

Query: 191 DYDIRVNGIAPGPI-GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
              +RVN +  G +  +   ++    + I + A   +PL +L    DIA A L+L SD  
Sbjct: 169 --KVRVNAVVVGLVRTEQSELHYGDAEGIAAVAAT-VPLGRLATPADIAWACLFLASDLA 225

Query: 250 KYVNGTTLIVDGG 262
            YV+G  L V GG
Sbjct: 226 SYVSGANLEVHGG 238

Length = 252

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  128 bits (324), Expect = 1e-35
 Identities = 85/254 (33%), Positives = 122/254 (48%), Gaps = 11/254 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK+AL+TG   GIG  I+    + GA V +  R+     A   A+ + G KA      
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +   E    +     E  G+LDILVN AA N +     D     F+  +D++  G F M 
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS 125

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA K +K+        GGGSI+N+++    +   +Q   +  KAAV ++T+  A E   
Sbjct: 126 VEAGKLMKEQ-------GGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAP 178

Query: 191 DYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
              IRVN + PG + DT   + L   D I  +A  ++PL +  E  ++A A LYL SD  
Sbjct: 179 F-GIRVNALLPG-LTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDAS 236

Query: 250 KYVNGTTLIVDGGL 263
            Y  G  L VDGG 
Sbjct: 237 SYTTGECLNVDGGY 250

Length = 252

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  128 bits (323), Expect = 1e-35
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 17/255 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            KGKVALITGG  GIG  I+  F + GA VA++       +     LR  G+     + D
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGV--FTIKCD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++  KK  E   + FG++D+LVN A   +L+  E+     +  ++ I+  G     +
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQIHVAAAKAAVDAITRNLALEWGA 190
           E L  LK        +  G+I+NI++     TA+      A  KA +  +TR LA E G 
Sbjct: 120 EFLPLLKL-------SKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELG- 171

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEIN---SKARDYMPLYKLGEKWDIAMAALYLTSD 247
            Y IRVN +APG +     ++  + +E        R+   L   G+  DIA   L+L SD
Sbjct: 172 KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASD 231

Query: 248 TGKYVNGTTLIVDGG 262
             +Y+ G  ++ DGG
Sbjct: 232 DARYITGQVIVADGG 246

Length = 255

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  127 bits (321), Expect = 2e-35
 Identities = 70/255 (27%), Positives = 112/255 (43%), Gaps = 17/255 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +V L+TG   G+G  I+  F + GA V +   R    ++A +     G +A+  + DVR 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRST--ESAEAVAAEAGERAIAIQADVRD 58

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLV------SAEDLSPNGFRTVMDIDSVGTFT 128
           ++  + ++E    HFG +D +VN A  +F        + + +    ++  ++    G   
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALN 118

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +    L   K+ G GR       ++NI   L             AKAA+   TRN+A E 
Sbjct: 119 LLQAVLPDFKERGSGR-------VINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKEL 171

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           G  Y I VN ++ G +      +   P E+        PL K+    DIA A L+  S  
Sbjct: 172 GP-YGITVNMVSGGLL-KVTDASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASPW 229

Query: 249 GKYVNGTTLIVDGGL 263
            + V G  L+VDGGL
Sbjct: 230 ARAVTGQNLVVDGGL 244

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  127 bits (322), Expect = 2e-35
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 23/262 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK KV +ITGG  G+G  ++    + GA +A++   ++ L+ AV+   +LG +  G+  +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAED------LSPNGFRTVMDID 122
           V  +E  +       E FG+L+ L+N A       LV A+D      +S   F++V+D++
Sbjct: 63  VTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
             G F    EA   + + G        G I+NIS+      +  Q + +A+KA V A+T 
Sbjct: 123 LTGVFLCGREAAAKMIESG------SKGVIINISSIARA-GNMGQTNYSASKAGVAAMTV 175

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
             A E  A Y IRV  IAPG I +T  M      E   +    +P+ +LGE  +IA    
Sbjct: 176 TWAKEL-ARYGIRVAAIAPGVI-ETE-MTAAMKPEALERLEKMIPVGRLGEPEEIAHTVR 232

Query: 243 Y-LTSDTGKYVNGTTLIVDGGL 263
           + + +D   YV G  L +DGGL
Sbjct: 233 FIIEND---YVTGRVLEIDGGL 251

Length = 253

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 8e-35
 Identities = 80/265 (30%), Positives = 125/265 (47%), Gaps = 21/265 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TG  SGIG  ++ ++   GA V I   +      A  A   +G  A+    D
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK---PARARLAALEIGPAAIAVSLD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V RQ+   ++V +  E FG +DIL N AA   +    D+S + +  +  ++  G F +  
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQ 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              +++ + G       GG I+N+++           H  A KAAV + T++ AL     
Sbjct: 121 AVARHMVEQGR------GGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALAL-IR 173

Query: 192 YDIRVNGIAPGPIGDTPGMNK----------LAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           + I VN IAPG + DTP  ++            P E      + +PL ++G   D+   A
Sbjct: 174 HGINVNAIAPGVV-DTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMA 232

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLS 266
           L+L S    Y+   T  VDGG W+S
Sbjct: 233 LFLASADADYIVAQTYNVDGGNWMS 257

Length = 257

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  125 bits (316), Expect = 1e-34
 Identities = 85/261 (32%), Positives = 119/261 (45%), Gaps = 23/261 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGF-E 69
           L GKVA+ITGG SGIG   +  F KHGA V I      + D A  A+   LG   + F  
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIA----DIDDDAGQAVAAELGDPDISFVH 57

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAA--GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
            DV  +   +  V++    FG+LDI+ N A   G    S  + S   F  V+D++  G F
Sbjct: 58  CDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAF 117

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
                A + +         A  GSI+++++              A+K AV  +TR+ A E
Sbjct: 118 LGTKHAARVMIP-------AKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATE 170

Query: 188 WGADYDIRVNGIAPGPI-----GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
            G  + IRVN ++P  +         G+   A +E    A             DIA A L
Sbjct: 171 LGE-HGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGA--ANLKGTALRPEDIAAAVL 227

Query: 243 YLTSDTGKYVNGTTLIVDGGL 263
           YL SD  +YV+G  L+VDGGL
Sbjct: 228 YLASDDSRYVSGQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  125 bits (316), Expect = 1e-34
 Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 12/255 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVA++TGG  GIG  I+    + GA V I     K+  +  V+ L   G      + 
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQA 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV + E A ++VE    HFGK+DILVN A      + + L+   +  V+D++    F   
Sbjct: 64  DVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTT 123

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
              L Y+       + A  G I++IS+ +     + Q + +AAKA +   T++LALE  A
Sbjct: 124 SAVLPYI-------TEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALEL-A 175

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             ++ VN I PG I DT  M    P+E+  K    +P  + G+  +IA   +YL  D G 
Sbjct: 176 KTNVTVNAICPGFI-DTE-MVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GA 232

Query: 251 YVNGTTLIVDGGLWL 265
           Y+ G  L ++GGL++
Sbjct: 233 YITGQQLNINGGLYM 247

Length = 247

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  129 bits (327), Expect = 3e-34
 Identities = 77/257 (29%), Positives = 116/257 (45%), Gaps = 17/257 (6%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
            +V  ITGG  GIG  ++ +F   G  + I+ R  +       AL   G + +  + D+ 
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADIT 325

Query: 74  RQEHAKKVVESTFEHFGKLDILVN-AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
            +   +         +G+LD+LVN A        + + S   F  V D++  G F     
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY 192
           A          R  + GG I+N+ +     A   +    A+KAAV  ++R+LA EW    
Sbjct: 386 AA---------RLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAP-A 435

Query: 193 DIRVNGIAPGPIGDTPGMNKL-APDEINS-KARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            IRVN +APG I +TP +  L A    +    R  +PL +LG+  ++A A  +L S    
Sbjct: 436 GIRVNTVAPGYI-ETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAAS 494

Query: 251 YVNGTTLIVDGGLWLSR 267
           YVNG TL VDGG     
Sbjct: 495 YVNGATLTVDGGWTAFG 511

Length = 520

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  124 bits (312), Expect = 7e-34
 Identities = 85/271 (31%), Positives = 123/271 (45%), Gaps = 28/271 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-------------LDAAVSAL 58
           L+GKVA ITG   G G   + +    GA +  +     +             LD     +
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 59  RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
            +LG K +  + DVR     + VVE   E FG+LD++V  A       + +LS   + TV
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTV 120

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
           +DI+  G +  C   + ++ + G       GGSI+  S+     A     H AAAK  + 
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERG------NGGSIIITSSVAGLKALPGLAHYAAAKHGLV 174

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK----ARDYMPLYKLG-- 232
            +T+ LA E  A+Y IRVN I P  + DTP +   A  E   K    AR +MP   +   
Sbjct: 175 GLTKTLANEL-AEYGIRVNSIHPYSV-DTPMIAPEAMREAFLKYPEAARAFMPALPVSGF 232

Query: 233 -EKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
               D+A A L+L SD  +Y+ G  L VD G
Sbjct: 233 VPPEDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 8e-34
 Identities = 75/252 (29%), Positives = 110/252 (43%), Gaps = 20/252 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKV  ITGG  G+G   +      GA VA++GR    L   +  + +  ++  G   D
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI--D 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   + A++ V+     FG+LD LVN A      +  D   + +  +  ++   T     
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            AL  L       +++GGG I+NI A     A       AAAKA V  +T  LA E   D
Sbjct: 123 AALPAL-------TASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL-D 174

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             I VN + P  I DTP      PD     +R   P         IA    +L SD  + 
Sbjct: 175 RGITVNAVLPSII-DTPPNRADMPDAD--FSRWVTPE-------QIAAVIAFLLSDEAQA 224

Query: 252 VNGTTLIVDGGL 263
           + G ++ VDGG+
Sbjct: 225 ITGASIPVDGGV 236

Length = 239

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  123 bits (311), Expect = 9e-34
 Identities = 90/277 (32%), Positives = 128/277 (46%), Gaps = 29/277 (10%)

Query: 1   MSLESPFKADI--LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL 58
           M L+  F  D   L GKVA++TGG +G+G   +    K GA + I+       D     +
Sbjct: 1   MELDK-FSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADI-IITTHGTNWDETRRLI 58

Query: 59  RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
              G K    + D+ + E A+KVV+   E FGK+DILVN A         +     +  V
Sbjct: 59  EKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAV 118

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
           MDI+    + +     K + K G G+       I+NI++ L +    +     A+K  V 
Sbjct: 119 MDINLNSVYHLSQAVAKVMAKQGSGK-------IINIASMLSFQGGKFVPAYTASKHGVA 171

Query: 179 AITRNLALEWGADYDIRVNGIAPG--------PIGDTPGMNKLAPDEINSKARDYMPLYK 230
            +T+  A E  A Y+I+VN IAPG        PI      N    DEI  +    +P  +
Sbjct: 172 GLTKAFANEL-AAYNIQVNAIAPGYIKTANTAPIRADKNRN----DEILKR----IPAGR 222

Query: 231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
            GE  D+  AA++L S    YVNG  L VDGG WL R
Sbjct: 223 WGEPDDLMGAAVFLASRASDYVNGHILAVDGG-WLVR 258

Length = 258

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  122 bits (307), Expect = 3e-33
 Identities = 84/257 (32%), Positives = 117/257 (45%), Gaps = 28/257 (10%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDV 72
           KVA+ITGG SGIG   +    K GA VAI+ R +    AA   L+++   +KA   + DV
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAA--ELQAINPKVKATFVQCDV 58

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGN---FLVSAEDLSPNGFRTVMDIDSVGTFTM 129
              E      +   E FG++DIL+N A        + A  L P  +   +D++  G    
Sbjct: 59  TSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPP-WEKTIDVNLTGVINT 117

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA----AAKAAVDAITRNLA 185
            + AL Y+ K   G+    GG I+NI +     A  Y         A+K  V   TR+LA
Sbjct: 118 TYLALHYMDKNKGGK----GGVIVNIGS----VAGLYPAPQFPVYSASKHGVVGFTRSLA 169

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
                   +RVN I PG   +TP    L PD + +K  + +P         +A A +YL 
Sbjct: 170 DLLEYKTGVRVNAICPGFT-NTP----LLPD-LVAKEAEMLPSAPTQSPEVVAKAIVYLI 223

Query: 246 SDTGKYVNGTTLIVDGG 262
            D  K  NG   IVDGG
Sbjct: 224 EDDEK--NGAIWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  121 bits (305), Expect = 6e-33
 Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 19/261 (7%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDV 72
            KVA+ITG   GIG  I+ +    G ++ +     +    + +  +   G  AV    DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
             ++  + +++   E FG  D++VN A    +     ++    + V  ++  G       
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQA 121

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY 192
           A +  KK G       GG I+N S+             +A+K AV  +T+  A E  A  
Sbjct: 122 AARQFKKLG------HGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQEL-APK 174

Query: 193 DIRVNGIAPGPIGDTPGMNKLA---------PDEINSKARDY-MPLYKLGEKWDIAMAAL 242
            I VN  APG I  T   + +          P+          +PL +L E  D+A    
Sbjct: 175 GITVNAYAPG-IVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVS 233

Query: 243 YLTSDTGKYVNGTTLIVDGGL 263
           +L S+   Y+ G T++VDGG+
Sbjct: 234 FLASEDSDYITGQTILVDGGM 254

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  120 bits (304), Expect = 1e-32
 Identities = 83/265 (31%), Positives = 129/265 (48%), Gaps = 25/265 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL+TGG  G+G  I+  F + GA  + I GR  +  +A  + L +LG KAV  + 
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGT 126
           D+   E  ++VV +  E FG+LD LVNAA     G  L    D SP  F     ++    
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL----DTSPELFDRHFAVNVRAP 119

Query: 127 FTMCHEALKYL-KKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
           F +  EA+K + ++          G+I+NI +   +    +     A+K A+  +TRN A
Sbjct: 120 FFLMQEAIKLMRRRKAE-------GTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAA 172

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKL------APDEINSKARDYMPLYKLGEKWDIAM 239
                +  IRVNG+  G +  T G +++      APD+   KA    P  +L +  ++A 
Sbjct: 173 YALLRN-RIRVNGLNIGWM-ATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVAR 230

Query: 240 AALYLTSDTGKYVNGTTLIVDGGLW 264
           A  +L SD    + G+ +  D  +W
Sbjct: 231 AVAFLLSDESGLMTGSVIDFDQSVW 255

Length = 260

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 2e-32
 Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 17/255 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              KVA++TG   GIG   +    + GASV +     +  +     + + G  A+  + D
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           V   + AK + ++T   FG +D LVN AA   G  L     +  + ++  M ++  G   
Sbjct: 64  VSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALV 123

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALE 187
                 K++ K        GGG+I+N S+    TA+W Y      AK  ++ +T+ LA E
Sbjct: 124 CTRAVYKHMAK-------RGGGAIVNQSS----TAAWLYSNFYGLAKVGLNGLTQQLARE 172

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
            G   +IRVN IAPGPI DT     + P E  +     +PL ++G   D+    L+L SD
Sbjct: 173 LGG-MNIRVNAIAPGPI-DTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSD 230

Query: 248 TGKYVNGTTLIVDGG 262
              ++ G    VDGG
Sbjct: 231 EASWITGQIFNVDGG 245

Length = 250

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  119 bits (299), Expect = 3e-32
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 20/225 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA------------AVSALR 59
           L GKVA +TG   GIG  I+ +  K GA+V +  +     D                 + 
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
           + G +A+    DVR ++  + +VE+T + FG+LDILVN A   +L   ED     F  + 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQ 120

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDA 179
            ++  GT+ +   AL ++ K G G        ILNIS  L    +   +  AA KA +  
Sbjct: 121 RVNLRGTYLLSQAALPHMVKAGQGH-------ILNISPPLSLRPARGDVAYAAGKAGMSR 173

Query: 180 ITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD 224
           +T  LA E    + I VN + P    +TP   +L+     ++AR 
Sbjct: 174 LTLGLAAELR-RHGIAVNSLWPSTAIETPAATELSGGSDPARARS 217

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  118 bits (298), Expect = 5e-32
 Identities = 77/253 (30%), Positives = 117/253 (46%), Gaps = 8/253 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           + GK+ L+TGG  GIG  I+  F + GA V I  R+ +    A   L + G + +    D
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPAD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +  +E  + +V    E   +LD+LVN A   +    E    +G+  VMDI+    F +  
Sbjct: 63  LSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNLALEWGA 190
             L  L+      + A    ++NI +      S  + +   A+KAAV  +TR LA E   
Sbjct: 123 ALLPLLRAAATAENPA---RVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAG 179

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYMPLYKLGEKWDIAMAALYLTSDTG 249
           ++ I VN IAPG    +     L  D    +A    +PL + G   D+A  A+ L S  G
Sbjct: 180 EH-ITVNAIAPGRF-PSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLASRAG 237

Query: 250 KYVNGTTLIVDGG 262
            Y+ G  + VDGG
Sbjct: 238 AYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 1e-31
 Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 28/220 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVALITGG  GIGF I+      G  VAI  R ++ L+ A + L + G   +G   D
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAAD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           VR +   ++ V++    FG LD+L+ NA  G+F    E+L+P  +R V+D +  G F   
Sbjct: 63  VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHF-APVEELTPEEWRLVIDTNLTGAFYTI 121

Query: 131 HEALKYLKKGGPGRSSAGGGSILNIS--ATLHYTA--SWYQIHVAAAKAAVDAITRNLAL 186
             A+  LK+GG        G I+NIS  A  ++ A  + Y     A+K  +   +    L
Sbjct: 122 KAAVPALKRGG--------GYIINISSLAGTNFFAGGAAYN----ASKFGLVGFSEAAML 169

Query: 187 EWGADYDIRVNGIAPGPI-----GDTPGMN---KLAPDEI 218
           +    Y I+V+ I PG +     G TP      K+ P++I
Sbjct: 170 DL-RQYGIKVSTIMPGSVATHFNGHTPSEKDAWKIQPEDI 208

Length = 237

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  116 bits (292), Expect = 5e-31
 Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 12/261 (4%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA--LRSLGIKAVGFEGDV 72
           +VA++T   SGIG   +    + G  + I     +   A  +A  +RS G++A   + D+
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEE-GAKETAEEVRSHGVRAEIRQLDL 61

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
                  + ++   +  G++D+LVN A         D+  + +R +  +D  G F     
Sbjct: 62  SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQI 121

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY 192
           A +++ K G       GG I+NI++   +T         AAK A+  +T+ +ALE   ++
Sbjct: 122 AARHMVKQGQ------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALEL-VEH 174

Query: 193 DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV 252
            I VN +APG I  TP MN +   ++   +R  +PL + G+  +IA    +L S+   Y 
Sbjct: 175 GILVNAVAPGAIA-TP-MNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYT 232

Query: 253 NGTTLIVDGGLWLSRPRHLPK 273
            G +LIVDGG  L+ P+   +
Sbjct: 233 TGQSLIVDGGFMLANPQFNSE 253

Length = 256

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  120 bits (302), Expect = 9e-31
 Identities = 78/254 (30%), Positives = 124/254 (48%), Gaps = 15/254 (5%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
           + +V L+TG   GIG     +F + G  V +  R    ++ A     SLG        DV
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN---VERARERADSLGPDHHALAMDV 60

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAA--GNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
             +   ++  E     FG++D+LVN A      + +  D +   F  +  I+  G + + 
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EAL+ + + G G       +I+N+++     A   +   +A+KAAV ++TR+LA EW A
Sbjct: 121 REALRLMIEQGHG------AAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAA 174

Query: 191 DYDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
              IRVN + PG +  T  + +L  A     S  R  +PL +LG   +IA A  +L SD 
Sbjct: 175 K-GIRVNAVLPGYV-RTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQ 232

Query: 249 GKYVNGTTLIVDGG 262
             Y+ G+TL+VDGG
Sbjct: 233 ASYITGSTLVVDGG 246

Length = 520

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 9e-31
 Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 20/257 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL-DAAVSALRSLGIKAVGFEG 70
           L  KVA++TG   GIG  I+ +    G +VA+         D  V+ + + G +A+  + 
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV       ++ ++    FG++D+LVN A    L +  D     F   +  +  G F + 
Sbjct: 63  DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVL 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNIS----ATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
            EA ++L +         GG I+N+S    A        Y    AA+KAAV+ +   LA 
Sbjct: 123 REAARHLGQ---------GGRIINLSTSVIALPLPGYGPY----AASKAAVEGLVHVLAN 169

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E      I VN +APGP+      N  + ++I+  A    PL +LG   +IA A  +L  
Sbjct: 170 ELRGR-GITVNAVAPGPVATELFFNGKSAEQIDQLAG-LAPLERLGTPEEIAAAVAFLAG 227

Query: 247 DTGKYVNGTTLIVDGGL 263
             G +VNG  L V+GG 
Sbjct: 228 PDGAWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  115 bits (289), Expect = 1e-30
 Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 18/256 (7%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAI----MGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
           A ITG   G+G  I+ +  + GA V +             A ++A    G+ A     DV
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGV-AFAAVQDV 60

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
             +   + ++    +  G L +LVN A      + E +  + +R VM I+    F  C  
Sbjct: 61  TDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKH 120

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA-D 191
           AL YL+   P        SI+NIS+   + A        A+KAAV ++T+++AL+     
Sbjct: 121 ALPYLRASQPA-------SIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRG 173

Query: 192 YDIRVNGIAPGPIGDTPGMN----KLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
            D+R N I P  I  T  ++    +L  +E   K    +PL +LGE  D+A A LYL SD
Sbjct: 174 LDVRCNSIHPTFI-RTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASD 232

Query: 248 TGKYVNGTTLIVDGGL 263
             ++V G  L++DGG+
Sbjct: 233 ESRFVTGAELVIDGGI 248

Length = 251

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  114 bits (287), Expect = 2e-30
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 17/258 (6%)

Query: 10  DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           D L  KVAL+T    GIG  I+ +  + GA V +  R++Q +D AV+ L+  G+   G  
Sbjct: 6   DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV 65

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             V + E  +++V +     G +DILV NAA   F  +  D +   +  ++D++   T  
Sbjct: 66  CHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATAL 125

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           M    +  ++K        GGGS++ +S+   +           +K A+  +T+NLA E 
Sbjct: 126 MTKAVVPEMEK-------RGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPEL 178

Query: 189 GADYDIRVNGIAPGPIGDTPG----MNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            A  +IRVN +APG I  +      M+K   + +    R    + +LG+  D A    +L
Sbjct: 179 -APRNIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLR----IRRLGQPEDCAGIVSFL 233

Query: 245 TSDTGKYVNGTTLIVDGG 262
            S+   Y+ G T++V GG
Sbjct: 234 CSEDASYITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 3e-30
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 11/253 (4%)

Query: 10  DILKGKVALITGG-GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAV- 66
            +L GKV L+T   G+GIG   + +  + GA V I    ++ L      L + LG+  V 
Sbjct: 13  GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVE 72

Query: 67  GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGT 126
               DV  +     ++++  E  G+LD+LVN A         D++ + +  V+D+   GT
Sbjct: 73  AVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           F     AL+Y+      R+   GG I+N ++ L + A   Q H AAAKA V A+TR  AL
Sbjct: 133 FRATRAALRYM------RARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSAL 186

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E  A+Y +R+N +AP  I   P + K+   E+  +        +  E W++A    +L S
Sbjct: 187 E-AAEYGVRINAVAPS-IAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLAS 244

Query: 247 DTGKYVNGTTLIV 259
           D   Y+ G  + V
Sbjct: 245 DYSSYLTGEVVSV 257

Length = 262

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 7e-30
 Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 18/259 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK ALITG   GIG  I+  F +HGA++ ++    ++   A   L   G +      D
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLA-DELCGRGHRCTAVVAD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR        ++   E  G++DILVN A    L S  D+S       +DI+  G + +  
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISA-TLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             L  +            G I+ +S+ T    A   +   A  KAA+  +T++LA+E+ A
Sbjct: 123 AVLPEMIA-------RKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEY-A 174

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA----PDEINSKARDY---MPLYKLGEKWDIAMAALY 243
              IRVN I PG +  TP    +A    P++  S   +    +PL +L +  ++   A +
Sbjct: 175 QSGIRVNAICPGYV-RTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAF 233

Query: 244 LTSDTGKYVNGTTLIVDGG 262
           L SD   Y+ GT  ++DGG
Sbjct: 234 LASDESSYLTGTQNVIDGG 252

Length = 263

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  112 bits (283), Expect = 9e-30
 Identities = 83/267 (31%), Positives = 116/267 (43%), Gaps = 29/267 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEG 70
           LKG+VALITGGGSG+G  +  +F   GA VA++ R  +     V+ LR+  G   VG EG
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAE----KVAELRADFGDAVVGVEG 57

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPN----GFRTVMDIDSVG 125
           DVR     ++ V    E FGKLD  + NA   ++  S  D+        F  +  I+  G
Sbjct: 58  DVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKG 117

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
                  AL  L           G  I  +S    Y      ++  A+K AV  + + LA
Sbjct: 118 YILGAKAALPALYAT-------EGSVIFTVSNAGFYPGGGGPLYT-ASKHAVVGLVKQLA 169

Query: 186 LEWGADYDIRVNGIAPGPI-GDTPGMNKLAPDEINS-------KARDYMPLYKLGEKWDI 237
            E      IRVNG+APG +  D  G   L   E +          +  +PL    E  D 
Sbjct: 170 YELAP--HIRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDY 227

Query: 238 AMAALYLTS-DTGKYVNGTTLIVDGGL 263
             A ++L S    +   GT +  DGG+
Sbjct: 228 TGAYVFLASRGDNRPATGTVINYDGGM 254

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  112 bits (282), Expect = 1e-29
 Identities = 66/249 (26%), Positives = 101/249 (40%), Gaps = 16/249 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVR 73
            VAL+TG    IG  I+      G  V +   R +         L +L   AV  + D+ 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
                  +V + F  FG+ D+LVN A+  +       S + +  +  I+    + +    
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAF 120

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
            + L     G       SI+NI   +             +KAA++ +TR+ ALE   +  
Sbjct: 121 ARRLAGSRNG-------SIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-- 171

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN 253
           IRVNGIAPG I     M      E    A   +PL +     +IA A ++L      Y+ 
Sbjct: 172 IRVNGIAPGLILLPEDM----DAEYRENALRKVPLKRRPSAEEIADAVIFLLDS--NYIT 225

Query: 254 GTTLIVDGG 262
           G  + VDGG
Sbjct: 226 GQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 1e-29
 Identities = 78/254 (30%), Positives = 110/254 (43%), Gaps = 26/254 (10%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA-VGFEGDV 72
           GK  L+TG  SGIG   +    + GA V    R    LD          ++  VG +  +
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAI 68

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
           R                G  D LVN A    L SA D++  GF  VM +++ G   +   
Sbjct: 69  RA----------ALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARH 118

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY 192
             + +   G       GGSI+N+S+          +   A+KAA+DAITR L +E G  +
Sbjct: 119 VARAMIAAG------RGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGP-H 171

Query: 193 DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTSDT 248
            IRVN + P  +  TP M   A  +   +    M    PL +  E  D+A   L+L SD 
Sbjct: 172 GIRVNSVNPT-VTLTP-MAAEAWSD--PQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA 227

Query: 249 GKYVNGTTLIVDGG 262
              V+G +L VDGG
Sbjct: 228 ASMVSGVSLPVDGG 241

Length = 245

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  111 bits (279), Expect = 3e-29
 Identities = 78/257 (30%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVA++TG  +G+G  ++    + G    I+G         +  + +LG + +    D
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCD--IVGINIVEPTETIEQVTALGRRFLSLTAD 65

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +R+ +    ++E     FG +DILVN A       A + S   +  VM+++    F M  
Sbjct: 66  LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ 125

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A K+    G       GG I+NI++ L +          A+K+ V  +TR +A EW A 
Sbjct: 126 AAAKHFIAQG------NGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEW-AK 178

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           ++I VN IAPG +  T    +L  DE  S    D +P  + G   D+    ++L S    
Sbjct: 179 HNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASD 237

Query: 251 YVNGTTLIVDGGLWLSR 267
           Y+NG T+ VDGG WL+R
Sbjct: 238 YINGYTIAVDGG-WLAR 253

Length = 253

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  110 bits (278), Expect = 5e-29
 Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 38/264 (14%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALRSLGIKAVGF 68
             KVALITGG   IG  I+      G  VAI   R       L A ++ALR     A+  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQ- 63

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+   +   ++V +    FG+LD LVN A+  +      ++   +  +   +    F 
Sbjct: 64  -ADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFF 122

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV----------AAAKAAVD 178
           +   A   L+K          G+I+NI+           IH            AAKAA++
Sbjct: 123 LSQAAAPQLRK--------QRGAIVNIT----------DIHAERPLKGYPVYCAAKAALE 164

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
            +TR+LALE     ++RVN +APG I   P       +E         PL ++G   DIA
Sbjct: 165 MLTRSLALELAP--EVRVNAVAPGAI-LWPEDGNSFDEEARQAILARTPLKRIGTPEDIA 221

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
            A  +L +D   ++ G  L VDGG
Sbjct: 222 EAVRFLLADAS-FITGQILAVDGG 244

Length = 249

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  111 bits (278), Expect = 5e-29
 Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 23/263 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFE 69
            K KV LITGGGSG+G   + +  K GA ++++   ++ L+AA +AL  +    + +  +
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
            DV  +   +  V++T E FG++D    NA         ED   + F  V+ I+  G F 
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 129 MCHEALKYLKKGGPGR--SSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
              + LK +++ G G   ++A  G I  +     Y         AAAK  V  +TRN A+
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGY---------AAAKHGVVGLTRNSAV 171

Query: 187 EWGADYDIRVNGIAPGPIGDTP----GMNKLAPDEINSKARDYM---PLYKLGEKWDIAM 239
           E+G  Y IR+N IAPG I  TP     + +L P+       +++   P+ + GE  ++A 
Sbjct: 172 EYG-QYGIRINAIAPGAIL-TPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAA 229

Query: 240 AALYLTSDTGKYVNGTTLIVDGG 262
              +L SD   YVN   + +DGG
Sbjct: 230 VVAFLLSDDAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  110 bits (277), Expect = 9e-29
 Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 37/269 (13%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
            GKV ++TG   GIG  ++ +    GA V ++ R + V + A + LR+ G +A+    D+
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVA-AELRAAGGEALALTADL 65

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV------SAEDLSPNGFRTVMDIDSVGT 126
                A+  + +  E FG++D+L+N   G            E +     R++       T
Sbjct: 66  ETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFP-----T 120

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
              C   L ++          GGG+I+N+S+    T    ++  +AAK  V+A+T +LA 
Sbjct: 121 LWCCRAVLPHMLA-------QGGGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAF 171

Query: 187 EWGADYDIRVNGIAPG----PIGDTPGMNKLAPD---------EINSKARDYMPLYKLGE 233
           E+ A++ IRVN +APG    P    P     AP          +I  +  D   + + G 
Sbjct: 172 EY-AEHGIRVNAVAPGGTEAPPRRVP--RNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGT 228

Query: 234 KWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             +   A L+L SD   Y+ GT L V GG
Sbjct: 229 IDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  110 bits (276), Expect = 1e-28
 Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 18/257 (7%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-EGD 71
             KV ++TGG  GIG  I   F ++GA V    R +    A  S L   G  +  F   D
Sbjct: 8   ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V ++E  K ++  T E FG++D LVN A  +    + ++ S   FR +++++ +  F   
Sbjct: 68  VTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLAS 127

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             AL +L+K          G+I+N+S+ +            A K A+ A+T+ LA++  +
Sbjct: 128 KYALPHLRK--------SQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVD-ES 178

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-----RDYMPLYKLGEKWDIAMAALYLT 245
            Y +RVN I+PG I  TP   +LA    ++ A          L ++G + +  +AAL+L 
Sbjct: 179 RYGVRVNCISPGNIW-TPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA 237

Query: 246 SDTGKYVNGTTLIVDGG 262
           ++   +  G  L++ GG
Sbjct: 238 AE-ATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  109 bits (274), Expect = 2e-28
 Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 13/217 (5%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KV LITG  SGIG  ++      G  V    R    L++    L +  ++ +  E DV  
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLG-ELLNDNLEVL--ELDVTD 57

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           +E  K  V+   E FG++D+LVN A        E+ S    R + +++  G   +    L
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
             ++K        G G I+N+S+      + +     A+KAA++A++ +L LE  A + I
Sbjct: 118 PLMRK-------QGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLE-LAPFGI 169

Query: 195 RVNGIAPGPIGDTPGMNK-LAPDEINSKARDYMPLYK 230
           +V  I PGP+  T   +        + +   Y P  K
Sbjct: 170 KVTIIEPGPV-RTGFADNAAGSALEDPEISPYAPERK 205

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  109 bits (275), Expect = 2e-28
 Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 27/264 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KVA+ITG  +GIG   +    + GA V  +   + V +  V  ++S G KA  +  D
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSET-VDKIKSNGGKAKAYHVD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA-----AGNFLVSAEDLSPNGFRTVMDIDSVGT 126
           +  ++  K       E FG++D+L N A     AG       D+    F  +M +D  GT
Sbjct: 63  ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDV----FDKIMAVDMRGT 118

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           F M    L  + + G        GSI+N S+     A  Y+    AAK AV   T+++A+
Sbjct: 119 FLMTKMLLPLMMEQG--------GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAI 170

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLA---PDEINSKARD----YMPLYKLGEKWDIAM 239
           E+G D  IR N IAPG I +TP ++KL     DE     R+      PL +LG+  ++A 
Sbjct: 171 EYGRD-GIRANAIAPGTI-ETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAK 228

Query: 240 AALYLTSDTGKYVNGTTLIVDGGL 263
             ++L SD   ++ G T+ +DGG+
Sbjct: 229 LVVFLASDDSSFITGETIRIDGGV 252

Length = 272

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (273), Expect = 2e-28
 Identities = 80/262 (30%), Positives = 119/262 (45%), Gaps = 30/262 (11%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +  L+TGG  G+G  I+  F + GA V +   + +  DAA +    LG +A+  + DV  
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADELGDRAIALQADVTD 63

Query: 75  QEHAKKVVESTFEHFGK-LDILVNAAAGNFLV------SAEDLSPNGFRTVMDIDSVGTF 127
           +E  + +  +  EHFGK +  +VN A  +F         A+D++   F+  ++    G  
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV------AAAKAAVDAIT 181
                AL       PG    G G I+NI   L      +Q  V        AKAA+  +T
Sbjct: 124 NTIQAAL-------PGMREQGFGRIINIGTNL------FQNPVVPYHDYTTAKAALLGLT 170

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           RNLA E G  Y I VN ++ G +  T   +   PDE+        PL K+    + A A 
Sbjct: 171 RNLAAELGP-YGITVNMVSGGLL-RTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAV 228

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
           L+  S   + V G  L+VDGGL
Sbjct: 229 LFFASPWARAVTGQNLVVDGGL 250

Length = 253

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  109 bits (274), Expect = 3e-28
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 9/203 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEG 70
           L+GKV +ITG  SGIG E++    + GA + +  RR++ L+   S    LG         
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+   E A++VVE   + FG LDIL+N A  +      D S +  R +M+++  G   + 
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALT 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             AL +L +    RS    GSI+ +S+        ++   AA+K A+     +L  E  +
Sbjct: 121 KAALPHLIE----RSQ---GSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAEL-S 172

Query: 191 DYDIRVNGIAPGPIGDTPGMNKL 213
           + +I V  + PG I     MN L
Sbjct: 173 EPNISVTVVCPGLIDTNIAMNAL 195

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  109 bits (273), Expect = 3e-28
 Identities = 74/268 (27%), Positives = 112/268 (41%), Gaps = 23/268 (8%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA--LRSLGIKAVGFEG 70
           KGKVAL+TG  SGIG  I+      GA++ + G        AV A      G+K +    
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+ +    + +V      FG +DILVN A    +   ED     +  ++ ++    F   
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             AL ++KK G GR       I+NI++     AS  +    AAK  V  +T+ +ALE  A
Sbjct: 121 RLALPHMKKQGWGR-------IINIASVHGLVASANKSAYVAAKHGVVGLTKVVALE-TA 172

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-----------MPLYKLGEKWDIAM 239
              +  N I PG +  TP + K                         P  +      +  
Sbjct: 173 GTGVTCNAICPGWV-LTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGD 231

Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWLSR 267
            A++L SD    + GT + VDGG W ++
Sbjct: 232 TAVFLASDAASQITGTAVSVDGG-WTAQ 258

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 3e-28
 Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 21/262 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKV +++G G G+G  ++ +  + GA V +  R  + LD   + +  LG +A+    D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVN-AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  ++    +V    E FG++D LVN A     +    D     +R V++++ +GT  + 
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNI-SATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
                 L +         GGSI+ I S  L ++   Y  +   AK A+ A +++LA E G
Sbjct: 123 QAFTPALAE--------SGGSIVMINSMVLRHSQPKYGAY-KMAKGALLAASQSLATELG 173

Query: 190 ADYDIRVNGIAPGPI-GDT--------PGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
               IRVN +APG I GD          G   +  ++I ++      L +L    ++A A
Sbjct: 174 -PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASA 232

Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
            L+L SD  + + G TL V+ G
Sbjct: 233 VLFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  108 bits (271), Expect = 5e-28
 Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 18/200 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVALITG  SGIG   +    + GA V +  RR++ L+A    + +    A+    D
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALAL--D 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +   +  +E+  E FG++DILVN A        ++   + +  ++D +  G      
Sbjct: 62  VTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTR 121

Query: 132 EALKYLKKGGPGRSSAGGGSILNIS---ATLHY-TASWYQIHVAAAKAAVDAITRNLALE 187
             L       PG      G I+N+        Y   + Y     A KAAV A +  L  E
Sbjct: 122 AVL-------PGMVERKSGHIINLGSIAGRYPYPGGAVY----GATKAAVRAFSLGLRQE 170

Query: 188 WGADYDIRVNGIAPGPIGDT 207
             A   IRV  I+PG +  T
Sbjct: 171 L-AGTGIRVTVISPGLVETT 189

Length = 246

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  113 bits (285), Expect = 5e-28
 Identities = 80/276 (28%), Positives = 123/276 (44%), Gaps = 26/276 (9%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           L+   K   L GKVAL+TG   GIG   + +    GA V +    ++  +AA + L    
Sbjct: 411 LQRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD 470

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDI 121
            +A+G   DV  +   +   E     FG +DI+V+  AG  +    E+ S   +R   D+
Sbjct: 471 -RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVS-NAGIAISGPIEETSDEDWRRSFDV 528

Query: 122 DSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAIT 181
           ++ G F +  EA++ +K  G       GGSI+ I++              AAKAA   + 
Sbjct: 529 NATGHFLVAREAVRIMKAQG------LGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLV 582

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-MPLYKLGEKW----- 235
           R LALE G D  IRVNG+ P  +    G+     + I ++A  Y +   +L E +     
Sbjct: 583 RQLALELGPD-GIRVNGVNPDAVVRGSGI--WTGEWIEARAAAYGLSEEELEEFYRARNL 639

Query: 236 --------DIAMAALYLTSDTGKYVNGTTLIVDGGL 263
                   D+A A ++L S       G  + VDGG 
Sbjct: 640 LKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGN 675

Length = 681

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 5e-28
 Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 10/256 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ AL+TG   GIG+ ++    + GA V + GR    L AA  +L+  G+ A     D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  +  +++     G +DILVN A   F    ED   + F  ++  +    F +  
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ 127

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              +++          G G I+NI++     A        A K AV  +T+ +A +W A 
Sbjct: 128 AVARHMIA-------RGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDW-AK 179

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           + ++ N IAPG   DTP    L  D E ++      P  + G+  ++  A ++L SD   
Sbjct: 180 HGLQCNAIAPGYF-DTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASS 238

Query: 251 YVNGTTLIVDGGLWLS 266
           +VNG  L VDGG+  S
Sbjct: 239 FVNGHVLYVDGGITAS 254

Length = 255

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  107 bits (270), Expect = 6e-28
 Identities = 71/256 (27%), Positives = 108/256 (42%), Gaps = 19/256 (7%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASV-AIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           K+AL+TG   GIG  I+ +    G  V A                     +    E DV 
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
             E   + +    E  G +DILVN A       F      +S   +  V++ +    F +
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGITRDSVFK----RMSHQEWNDVINTNLNSVFNV 118

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
                             G G I+NIS+       + Q + +AAKA +   T+ LA E G
Sbjct: 119 TQPLF-------AAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASE-G 170

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A Y I VN IAPG I  TP M +    E+     + +P+ +LG   +IA A  +L S+  
Sbjct: 171 ARYGITVNCIAPGYIA-TP-MVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAA 228

Query: 250 KYVNGTTLIVDGGLWL 265
            ++ G T+ ++GGL++
Sbjct: 229 GFITGETISINGGLYM 244

Length = 245

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 6e-28
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 39/267 (14%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+VA+ITGGGSGIG   + +    GA+V +     +   AA   +  L +       D
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPT-----D 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLS-----PNGFRTVMDIDSVGT 126
           V  ++    + ++  E +G +DI  N A    +   ED S      + ++ V D++    
Sbjct: 60  VTDEDAVNALFDTAAETYGSVDIAFNNAG---ISPPEDDSILNTGLDAWQRVQDVNLTSV 116

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY--------QIHVAAAKAAVD 178
           +  C  AL ++ +        G GSI+N       TAS+         QI   A+K  V 
Sbjct: 117 YLCCKAALPHMVR-------QGKGSIIN-------TASFVAVMGSATSQISYTASKGGVL 162

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD--YMPLYKLGEKWD 236
           A++R L +++ A   IRVN + PGP+ +TP + +L   +    AR   ++P+ +  E  +
Sbjct: 163 AMSRELGVQF-ARQGIRVNALCPGPV-NTPLLQELFAKDPERAARRLVHVPMGRFAEPEE 220

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGL 263
           IA A  +L SD   ++  +T +VDGG+
Sbjct: 221 IAAAVAFLASDDASFITASTFLVDGGI 247

Length = 255

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 8e-28
 Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 14/256 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GKVAL+TGG +GIG   +  F + GA V +  R     +  V+ +R  G +A+    D
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTF-TM 129
           V R    K +VE T   +G+LD   N A          + S   F  +M ++  G +  M
Sbjct: 65  VTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCM 124

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
            ++    L +        GGG+I+N ++     A+      AA+K AV  +T++ A+E+ 
Sbjct: 125 KYQIPLMLAQ--------GGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEY- 175

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           A   IRVN + P  I DT    +   A       A    P+ ++G+  ++A A LYL SD
Sbjct: 176 AKKGIRVNAVCPAVI-DTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSD 234

Query: 248 TGKYVNGTTLIVDGGL 263
              +  G  L+VDGG 
Sbjct: 235 GASFTTGHALMVDGGA 250

Length = 253

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 9e-28
 Identities = 86/270 (31%), Positives = 118/270 (43%), Gaps = 44/270 (16%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK KV ++TGG SGIG  IS +  + GA   I GR     D     LR+L  +A   + D
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEFVQVD 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      +  VE T   FG++D LVN A  N  V  E      F   ++ + +  + M H
Sbjct: 64  LTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEA-GREAFVASLERNLIHYYVMAH 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTA----SWYQIHVAAAKAAVDAITRNLALE 187
             L +LK        A  G+I+NIS+    T     S Y    AAAK A  A+TR    E
Sbjct: 123 YCLPHLK--------ASRGAIVNISSKTALTGQGGTSGY----AAAKGAQLALTR----E 166

Query: 188 WGAD---YDIRVNGIAPGPIGDTP-----------GMNKLAPDEINSKARDYMPLYK-LG 232
           W        +RVN + P  +  TP              KLA   I +K    +PL   + 
Sbjct: 167 WAVALAKDGVRVNAVIPAEVM-TPLYENWIATFDDPEAKLA--AITAK----IPLGHRMT 219

Query: 233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
              +IA  A++L S+   +  G  L VDGG
Sbjct: 220 TAEEIADTAVFLLSERSSHTTGQWLFVDGG 249

Length = 258

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 1e-27
 Identities = 80/259 (30%), Positives = 121/259 (46%), Gaps = 16/259 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA+ITG  +G+G  ++    K GA   I+G          + + +LG K      D
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGAD--IVGVGVAEAPETQAQVEALGRKFHFITAD 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL---SPNGFRTVMDIDSVGTFT 128
           + +Q+    +V    E  G +DIL+N A    ++  +DL       +  V++I+    F 
Sbjct: 64  LIQQKDIDSIVSQAVEVMGHIDILINNAG---IIRRQDLLEFGNKDWDDVININQKTVFF 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +     K   K G       GG I+NI++ L +          A+K+AV  +TR LA E 
Sbjct: 121 LSQAVAKQFVKQG------NGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATEL 174

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            + Y+I VN IAPG +         A    N    + +P  + G   D+A  A++L+S  
Sbjct: 175 -SQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSA 233

Query: 249 GKYVNGTTLIVDGGLWLSR 267
             YV G TL VDGG WL+R
Sbjct: 234 SDYVTGYTLAVDGG-WLAR 251

Length = 251

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  107 bits (268), Expect = 1e-27
 Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 31/272 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK KVA++TGG  GIG  +  +  + G++V I    K+     V            F+ D
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNV-INFDIKEPSYNDVDY----------FKVD 52

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +E   K ++     +G++DILVN A      +   +  + +  +++++  G F M  
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSK 112

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             + Y+ K          G I+NI++   +  +        +K AV  +TR++A+++   
Sbjct: 113 YTIPYMLK-------QDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP- 164

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA-------PDEINSKARDY---MPLYKLGEKWDIAMAA 241
             IR   + PG I  TP +   A       P+ +  K R++    P+ ++G+  ++A   
Sbjct: 165 -TIRCVAVCPGSI-RTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVV 222

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPK 273
            +L SD   ++ G  + VDGGL    P   PK
Sbjct: 223 AFLASDLASFITGECVTVDGGLRALIPLSTPK 254

Length = 258

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  106 bits (267), Expect = 2e-27
 Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASV-AIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           ++AL+TGG  GIG  I  +  K G  V A  G  ++  +A +    +LG      EGDV 
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             E  K  V       G +D+LVN A      + + ++   +  V+D +    F +    
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPV 120

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           +  +++ G GR       I+NIS+       + Q + +AAKA +   T+ LA E GA   
Sbjct: 121 IDGMRERGWGR-------IINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQE-GATKG 172

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN 253
           + VN I+PG I  T  M     +++ +     +P+ +LG   +IA A  +L S+   Y+ 
Sbjct: 173 VTVNTISPGYIA-TD-MVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYIT 230

Query: 254 GTTLIVDGGLWL 265
           G TL ++GGL++
Sbjct: 231 GATLSINGGLYM 242

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  106 bits (267), Expect = 2e-27
 Identities = 80/262 (30%), Positives = 119/262 (45%), Gaps = 20/262 (7%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
             KVAL+TG G GIGF I+ +  + G  VAI+   ++   AA   L   G KA+  + DV
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
             ++     V    + FG L+++VN A        E ++   F  V +I+  G       
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQA 120

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY 192
           A +  KK G       GG I+N ++      +      ++ K AV  +T+  A +  A  
Sbjct: 121 AQEAFKKLG------HGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDL-ASE 173

Query: 193 DIRVNGIAPGPIGDTPGMNKLA---------PDEINSK--ARDYMPLYKLGEKWDIAMAA 241
            I VN  APG I  TP M  +A         PDE   +  A+D + L +L E  D+A   
Sbjct: 174 GITVNAYAPG-IVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD-ITLGRLSEPEDVANCV 231

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L      Y+ G T+IVDGG+
Sbjct: 232 SFLAGPDSDYITGQTIIVDGGM 253

Length = 256

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  106 bits (266), Expect = 4e-27
 Identities = 88/285 (30%), Positives = 126/285 (44%), Gaps = 46/285 (16%)

Query: 2   SLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL 61
           S  S   +  L GKVAL+TGG +GIG  I   F KHGA V I+  +    D   +   SL
Sbjct: 6   SSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQD---DLGQNVCDSL 62

Query: 62  GIK--AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAA--AGNFLVSAEDLSPNGFRT 117
           G +     F  DV  ++   + V+ T + FG LDI+VN A   G       ++  + F  
Sbjct: 63  GGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEK 122

Query: 118 VMDIDSVGTF-TMCHEA--LKYLKKGGPGRSSAGGGSILNISATLH-YTASWYQIHVAAA 173
           V D++  G F  M H A  +  LKKG      +   +I  +    H YT S         
Sbjct: 123 VFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--HAYTGS--------- 171

Query: 174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE---------------- 217
           K AV  +TR++A E G  + IRVN ++P  +     +  L  DE                
Sbjct: 172 KHAVLGLTRSVAAELGK-HGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKN 230

Query: 218 INSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            N K  +           D+A A L+L SD  +Y++G  L++DGG
Sbjct: 231 ANLKGVELTVD-------DVANAVLFLASDEARYISGLNLMIDGG 268

Length = 280

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 4e-27
 Identities = 78/273 (28%), Positives = 115/273 (42%), Gaps = 28/273 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+VALITGGGSGIG  +  +F   GA VA++ R  + L +        G   +  EGD
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQR---FGDHVLVVEGD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPN----GFRTVMDIDSVGT 126
           V      ++ V+ T + FGKLD  V NA   ++  S  D+        F  + +++  G 
Sbjct: 61  VTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGY 120

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
                 AL  LK        +GG  I  +S +  Y      ++  A+K AV  + R LA 
Sbjct: 121 LLGAKAALPALKA-------SGGSMIFTLSNSSFYPGGGGPLYT-ASKHAVVGLVRQLAY 172

Query: 187 EWGADYDIRVNGIAPGPIG------DTPGMNKLAPDEINSKARDY---MPLYKLGEKWDI 237
           E      IRVNG+APG          + G  + +  +    A       PL    +  D 
Sbjct: 173 ELAP--KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDH 230

Query: 238 AMAALYLTSD-TGKYVNGTTLIVDGGLWLSRPR 269
               + L S    + + G  +  DGGL +   R
Sbjct: 231 TGPYVLLASRRNSRALTGVVINADGGLGIRGIR 263

Length = 263

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  105 bits (263), Expect = 5e-27
 Identities = 67/191 (35%), Positives = 88/191 (46%), Gaps = 16/191 (8%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL-DAAVSALRSLGIKAVGFEGDVR 73
           KVAL+TG   GIGFEI  Q  K G    I+  R      AAV  LR+ G+     + DV 
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNG--FRTVMDIDSVGTFTMCH 131
                +   +   E +G LDILVN  AG      +D +P     R  M  +  GT  +  
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVN-NAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             L  LKK   GR       I+N+S+ L    S Y      +KAA++A+TR LA E   +
Sbjct: 120 ALLPLLKKSPAGR-------IVNVSSGLGSLTSAY----GVSKAALNALTRILAKEL-KE 167

Query: 192 YDIRVNGIAPG 202
             I+VN   PG
Sbjct: 168 TGIKVNACCPG 178

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 8e-27
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 9/251 (3%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           KV +ITG   GIG   +    + G +V +   R +   +A V A+R  G +A+    DV 
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 74  RQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
            +    ++ E+     G+LD LV NA      +  E +       +   + VG+F    E
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCARE 122

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-IHVAAAKAAVDAITRNLALEWGAD 191
           A+K +     GR    GG+I+N+S+      S  + I  AA+K A+D +T  LA E  A+
Sbjct: 123 AVKRMSTRHGGR----GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE 178

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             IRVN + PG I      +   P  ++ + +  +P+ + G   ++A A L+L SD   Y
Sbjct: 179 -GIRVNAVRPGVIYTEIHASGGEPGRVD-RVKAGIPMGRGGTAEEVARAILWLLSDEASY 236

Query: 252 VNGTTLIVDGG 262
             GT + V GG
Sbjct: 237 TTGTFIDVSGG 247

Length = 248

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  104 bits (260), Expect = 1e-26
 Identities = 71/250 (28%), Positives = 110/250 (44%), Gaps = 14/250 (5%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           GKVA++TGGG GIG +I   F + G  V      ++          + G       GDV 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE---RGADFAEAEGPNLFFVHGDVA 57

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
            +   K VV +  E  G++D+LVN AA         L    +  ++ ++  G + +    
Sbjct: 58  DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYC 117

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
              L K          G I+NI++T  + +       AA+K  + A+T  LA+  G   D
Sbjct: 118 RDELIK--------NKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGP--D 167

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN 253
           IRVN I+PG I +T    +     +  +     P  ++G   DIA   L+L      ++ 
Sbjct: 168 IRVNCISPGWI-NTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAGFIT 226

Query: 254 GTTLIVDGGL 263
           G T IVDGG+
Sbjct: 227 GETFIVDGGM 236

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  104 bits (261), Expect = 1e-26
 Identities = 77/265 (29%), Positives = 116/265 (43%), Gaps = 21/265 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK ALITG   GIG   +  + + GA VAI       L+AA +    +G  A     D
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADIN---LEAARATAAEIGPAACAISLD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  Q    + V +  + +G +DILVN AA   L    D++   +  +  I+  GT  M  
Sbjct: 58  VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQ 117

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              + +   G       GG I+N+++              A KAAV ++T++  L     
Sbjct: 118 AVARAMIAQGR------GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL-IR 170

Query: 192 YDIRVNGIAPGPIGDTP---GMNKLAPDEIN----SKAR---DYMPLYKLGEKWDIAMAA 241
           + I VN IAPG + D     G++       N     K R   + +P  ++G   D+   A
Sbjct: 171 HGINVNAIAPGVV-DGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMA 229

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLS 266
           ++L S    Y+   T  VDGG W+S
Sbjct: 230 IFLASTDADYIVAQTYNVDGGNWMS 254

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  103 bits (258), Expect = 4e-26
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 18/259 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVAL+TGG  GIG  I+ +  K G +VA+    ++        +   G KAV ++ DV  
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           ++     ++   E FG  D++VN A    +    +++    + V +++  G       A 
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
           +  KK G       GG I+N ++   +  +      ++ K AV  +T+  A E      I
Sbjct: 121 RQFKKQG------HGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKG-I 173

Query: 195 RVNGIAPGPIGDTP-------GMNKLAPDEINSKARDYMPLYKLG---EKWDIAMAALYL 244
            VN   PG I  TP         +++A   I     ++     LG   E  D+A    +L
Sbjct: 174 TVNAYCPG-IVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232

Query: 245 TSDTGKYVNGTTLIVDGGL 263
            S+   Y+ G +++VDGG+
Sbjct: 233 ASEDSDYITGQSILVDGGM 251

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 6e-26
 Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 18/257 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK  LITG   GIGF ++T   ++GA + I     +  + AV+ LR  GIKA     +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++  +  +E   +  G +D+L+N A         +     +  V+ ++    F +  
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQ 126

Query: 132 EALKYLKKGGPGRSSAGGGSILNI----SATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
              +Y+ K   G+       I+NI    S     T + Y    AA+K AV  +TR + +E
Sbjct: 127 AVARYMVKRQAGK-------IINICSMQSELGRDTITPY----AASKGAVKMLTRGMCVE 175

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTS 246
             A ++I+VNGIAPG    T     L  D    +      P  + G+  ++  AA++L+S
Sbjct: 176 L-ARHNIQVNGIAPGYF-KTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSS 233

Query: 247 DTGKYVNGTTLIVDGGL 263
               +VNG  L VDGG+
Sbjct: 234 KASDFVNGHLLFVDGGM 250

Length = 254

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  102 bits (256), Expect = 6e-26
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 32/260 (12%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
            GKVALIT    GIG  I+  F + GA+V      ++ L       R  GI       DV
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKL---KELERGPGITTRVL--DV 55

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
                 K+ V +  +  G++D+L N A     G+ L    D   + +   M+++    + 
Sbjct: 56  TD----KEQVAALAKEEGRIDVLFNCAGFVHHGSIL----DCEDDDWDFAMNLNVRSMYL 107

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNI-SATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
           M    L       P   +   GSI+N+ S          +   +  KAAV  +T+++A +
Sbjct: 108 MIKAVL-------PKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAAD 160

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--RDYM---PLYKLGEKWDIAMAAL 242
           + A   IR N I PG + DTP + +    + + +   + +    PL +L    ++A  A+
Sbjct: 161 F-AQQGIRCNAICPGTV-DTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAV 218

Query: 243 YLTSDTGKYVNGTTLIVDGG 262
           YL SD   YV GT +++DGG
Sbjct: 219 YLASDESAYVTGTAVVIDGG 238

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  101 bits (255), Expect = 9e-26
 Identities = 68/254 (26%), Positives = 104/254 (40%), Gaps = 35/254 (13%)

Query: 24  SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEGDVRRQEHAKKVV 82
           + I + I+    + GA V +      +   AV  L + L    +    DV   E   ++ 
Sbjct: 6   NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVIPL--DVTSDEDIDELF 63

Query: 83  ESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLK 138
           E   E  GK+D LV++ A            D S  GF   +DI +    ++   A   + 
Sbjct: 64  EKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKPLMN 123

Query: 139 KGGPGRSSAGGGSILNISATLHYTAS----WYQIHVAAAKAAVDAITRNLALEWGADYDI 194
           +GG         SI+     L Y A+         +  AKAA++++ R LA E G    I
Sbjct: 124 EGG---------SIV----ALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKG-I 169

Query: 195 RVNGIAPGPIGDT-----PGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           RVN I+ GP   T      G +K+  +     A    PL +     ++A AA +L SD  
Sbjct: 170 RVNTISAGPTKTTAGSGIGGFDKMV-EYAEEMA----PLGRNASAEEVANAAAFLLSDLA 224

Query: 250 KYVNGTTLIVDGGL 263
           + + G  L VDGG 
Sbjct: 225 RGITGQILYVDGGF 238

Length = 239

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 1e-25
 Identities = 80/267 (29%), Positives = 125/267 (46%), Gaps = 43/267 (16%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TGG + IG  ++      GA VAI+        AAV+A  SLG +A     D
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIVD-IDADNGAAVAA--SLGERARFIATD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRT-------VMDIDSV 124
           +      ++ V +    FG++DILVN A      +  D   +G  +        +D++ V
Sbjct: 61  ITDDAAIERAVATVVARFGRVDILVNLAC-----TYLD---DGLASSRADWLAALDVNLV 112

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILN---ISATLHYTASW-YQIHVAAAKAAVDAI 180
               +   A  +L          GGG+I+N   ISA    T  W Y     A+KAA+  +
Sbjct: 113 SAAMLAQAAHPHLA--------RGGGAIVNFTSISAKFAQTGRWLY----PASKAAIRQL 160

Query: 181 TRNLALEWGADYDIRVNGIAPG----PIGDT-PGMNKLAPDEINSKARDYMPLYKLGEKW 235
           TR++A++   D  IRVN ++PG     + D   G ++   D +   A  +  L ++G+  
Sbjct: 161 TRSMAMDLAPD-GIRVNSVSPGWTWSRVMDELSGGDRAKADRV---AAPFHLLGRVGDPE 216

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGG 262
           ++A    +L SD   +V G    VDGG
Sbjct: 217 EVAQVVAFLCSDAASFVTGADYAVDGG 243

Length = 261

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 1e-25
 Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 28/267 (10%)

Query: 10  DILKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSAL-RSLGIKAVG 67
           + +KGK  +I+GG  GIG  I  +F + G ++A       +  +     L +  GIKA  
Sbjct: 4   NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKA 63

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAA-------AGNFLVSAEDLSPNGFRTVMD 120
           +  ++   E  K++ +   E F ++D  ++ A        G +      L P G   +  
Sbjct: 64  YPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGY-TKFMRLKPKGLNNIYT 122

Query: 121 IDSVGTFTM-CHEALKYLKKGGPGRSSAGGGSILNISAT--LHYTASWYQIHVAAAKAAV 177
             +V  F +   EA K ++K        GGGSI+++S+T  L Y  + Y  H   +KAAV
Sbjct: 123 A-TVNAFVVGAQEAAKRMEK-------VGGGSIISLSSTGNLVYIEN-YAGH-GTSKAAV 172

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD--EINSKARDYMPLYKLGEKW 235
           + + +  A E G + +IRVN ++ GPI DT  + K   +  E+ +K  +  PL ++G+  
Sbjct: 173 ETMVKYAATELG-EKNIRVNAVSGGPI-DTDAL-KAFTNYEEVKAKTEELSPLNRMGQPE 229

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGG 262
           D+A A L+L S+   ++ G T++VDGG
Sbjct: 230 DLAGACLFLCSEKASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score =  101 bits (254), Expect = 3e-25
 Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA--VSALRSLGIKAVGFE 69
           L+G+ ALITG  SGIG   +  F + GA +A+    ++  DAA  V  +++ G KAV   
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDIDSVGTFT 128
           GD++ +   +++VE   +  G LDILVN A     V    D++   F      +    F 
Sbjct: 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFW 172

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +C  A+ +L           G SI+N  +   Y  S   +  A+ KAA+ A T+ LA + 
Sbjct: 173 LCKAAIPHLPP---------GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQV 223

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A+  IRVN +APGP+      +   P E         P+ + G+  ++A   + L S  
Sbjct: 224 -AEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQE 282

Query: 249 GKYVNGTTLIVDGGLWLS 266
             YV G    V GGL LS
Sbjct: 283 SSYVTGEVFGVTGGLLLS 300

Length = 300

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 8e-25
 Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 29/268 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFE- 69
            + +  L+TGGGSGIG  ++      GA+V I+GR    L AA   + +L G  AV +E 
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFT 128
            DV  ++   + V++     G+L  +V+ A G+  +     +  + +R  +D++  GT  
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMY 124

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISA-TLHYTASWYQIHVAAAKAAVDAITRNLALE 187
           +   A + L +G       GGGS + IS+     T  W+  +    K+AVD + +  A E
Sbjct: 125 VLKHAARELVRG-------GGGSFVGISSIAASNTHRWFGAY-GVTKSAVDHLMKLAADE 176

Query: 188 WGADYDIRVNGIAPG--------PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAM 239
            G  + +RVN I PG        PI ++P        E+++  R   PL ++GE  D+A 
Sbjct: 177 LGPSW-VRVNSIRPGLIRTDLVAPITESP--------ELSADYRACTPLPRVGEVEDVAN 227

Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWLSR 267
            A++L SD   ++ G  + VDGG  L R
Sbjct: 228 LAMFLLSDAASWITGQVINVDGGHMLRR 255

Length = 276

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 98.8 bits (247), Expect = 1e-24
 Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 42/269 (15%)

Query: 14  GKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           GK  LITG  +   I + I+    + GA +A   + + +          LG  A+    D
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRTVMDIDS 123
           V   E  K++     + +GKLD LV++ A        G FL    D S  GF   +DI +
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFL----DTSRKGFLKALDISA 116

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH----VAAAKAAVDA 179
               ++   AL  +           GGSI+    TL Y  S   +     +  AKAA+++
Sbjct: 117 YSLVSLAKAALPIMNP---------GGSIV----TLSYLGSERVVPGYNVMGVAKAALES 163

Query: 180 ITRNLALEWGADYDIRVNGIAPGPI-----GDTPGMNKLAPDEINSKARDYMPLYKLGEK 234
             R LA E G    IRVN I+ GPI         G +K+  +    +A    PL +    
Sbjct: 164 SVRYLAYELGR-KGIRVNAISAGPIKTLAASGITGFDKML-EYSEQRA----PLGRNVTA 217

Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            ++   A +L SD    + G  + VDGG 
Sbjct: 218 EEVGNTAAFLLSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 98.5 bits (246), Expect = 2e-24
 Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 36/221 (16%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS----LGIKAVGFE 69
           GK  LITGG SGIG  ++ +  K GA+V I+ R +  L+ AV  + +     G K     
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVG 125
            D+   E  ++      E  G  D++VN A     G F    EDL+   F   MD++  G
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLF----EDLTAEEFERGMDVNYFG 116

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATL------HYTASWYQIHVAAAKAAVDA 179
           +  + H  L  +K+  PG        I+ +S+         Y+A  Y      +K A+  
Sbjct: 117 SLNVAHAVLPLMKEQRPGH-------IVFVSSQAALVGIYGYSA--Y----CPSKFALRG 163

Query: 180 ITRNLALEWGADYDIRVNGIAPGPIGDTPGM---NKLAPDE 217
           +  +L  E    Y+IRV+ + P    DTPG    NK  P+E
Sbjct: 164 LAESLRQEL-KPYNIRVSVVYPPDT-DTPGFEEENKTKPEE 202

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 98.9 bits (247), Expect = 2e-24
 Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 18/255 (7%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
            L+TG   GIG+ ++    + GA VA + R  + L   V+ LR  G     ++ DV    
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
              +VV+     +G +D+LVN A    L + + LS   ++    +++ G F +       
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPR 120

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
           +K     RS    G+I+ + +             AA+KAA+  +T+ L LE  A Y IR 
Sbjct: 121 MK---RRRS----GAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLEL-APYGIRC 172

Query: 197 NGIAPGPIGDTPGMNKLAPDE------INSKARDY---MPLYKLGEKWDIAMAALYLTSD 247
           N ++PG   DT    +L  DE      I      +   +PL K+ E  DIA A L+L SD
Sbjct: 173 NVVSPGST-DTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASD 231

Query: 248 TGKYVNGTTLIVDGG 262
              ++    L+VDGG
Sbjct: 232 LASHITMHDLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 98.4 bits (245), Expect = 2e-24
 Identities = 77/234 (32%), Positives = 103/234 (44%), Gaps = 13/234 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TG  SGIG   +      GA+VAI  RR   L+A    L + G KA+  E D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++     VE T E  G+LDILVN A    L   ED     +  ++D + +G     H
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTH 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            AL       P       G+I+NIS+     A        A K  V+A +  L  E    
Sbjct: 121 AAL-------PHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTER 173

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--RDYMPLYKLGEKWDIAMAALY 243
             +RV  I PG + DT  +       I  +A       + KL +  DIA A  Y
Sbjct: 174 -GVRVVVIEPGTV-DTE-LRDHITHTITKEAYEERISTIRKL-QAEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 80/256 (31%), Positives = 120/256 (46%), Gaps = 9/256 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TG  SG+G   +    + GA V +  RR + L    + + + G  A     D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  K  V       G +DILVN +  +      D++P  F  V D ++ G F +  
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQ 126

Query: 132 EALKYL---KKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNLALE 187
           E  K +    KG     +  GG I+NI A++       QI +   +KAAV  +TR +ALE
Sbjct: 127 EVAKRMIARAKGAGN--TKPGGRIINI-ASVAGLRVLPQIGLYCMSKAAVVHMTRAMALE 183

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           WG  + I VN I PG I DT   +     E   K    +P  ++G+  D+    L L +D
Sbjct: 184 WGR-HGINVNAICPGYI-DTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAAD 241

Query: 248 TGKYVNGTTLIVDGGL 263
             +++NG  +  D G 
Sbjct: 242 ESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 98.5 bits (245), Expect = 2e-24
 Identities = 73/257 (28%), Positives = 120/257 (46%), Gaps = 14/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K A++TGGG GIG     +F + GA VA+    ++  +   + +R+ G  A  F  D
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +  ++     V +  +  G +D+LVN A  +         P  +  ++ I+  G   M H
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHH 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             L       PG    G G I+NI++      S  +   AA K  + A ++ +A E  A 
Sbjct: 121 AVL-------PGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREH-AR 172

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           + I VN + PGP  DT  ++ +      P+++       +PL +LG+  D+  A L+ +S
Sbjct: 173 HGITVNVVCPGPT-DTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSS 231

Query: 247 DTGKYVNGTTLIVDGGL 263
           D   ++ G  L V GGL
Sbjct: 232 DDASFITGQVLSVSGGL 248

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 98.8 bits (247), Expect = 3e-24
 Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 17/199 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIK 64
           L GK   ITG   GIG  I+ +  + GA++ I  +  +        +  A   + + G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           A+   GDVR ++     V    E FG +DI VN A+   L   ED     F  +  I+  
Sbjct: 64  ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVR 123

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA--AAKAAVDAITR 182
           GTF +    L +LKK       +    IL +S  L+    W+  H A   AK  +   T 
Sbjct: 124 GTFLVSQACLPHLKK-------SENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTL 176

Query: 183 NLALEWGADYDIRVNGIAP 201
            LA E+  D  I VN + P
Sbjct: 177 GLAEEF-RDDGIAVNALWP 194

Length = 273

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 78/266 (29%), Positives = 116/266 (43%), Gaps = 34/266 (12%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           GKVAL+TGG SGIG  I+ +    GA+V +     ++ +    A +  G +A+G + DV 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQ-GGPRALGVQCDVT 59

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMCHE 132
            +   +   E     FG LDI+V+  AG    S   + S   +   MDI+  G F +  E
Sbjct: 60  SEAQVQSAFEQAVLEFGGLDIVVS-NAGIATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYT---ASWYQIHVAAAKAAVDAITRNLALEWG 189
           A + +K  G      GG  + N S         A+ Y    +AAKAA   + R LALE G
Sbjct: 119 AFRIMKSQG-----IGGNIVFNASKNAVAPGPNAAAY----SAAKAAEAHLARCLALEGG 169

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW-------------D 236
            D  IRVN + P  +     + +       +KA        L E++             D
Sbjct: 170 ED-GIRVNTVNPDAVFRGSKIWEGVWRAARAKAYG-----LLEEEYRTRNLLKREVLPED 223

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGG 262
           +A A + + S+      G  + VDGG
Sbjct: 224 VAEAVVAMASEDFGKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 97.8 bits (244), Expect = 3e-24
 Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 28/205 (13%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI---------MGRRKQVLDAAVSALRSL 61
              G+V L+TG G G+G   +  F + GA V +          G+     D  V  +++ 
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 62  GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRT 117
           G KAV     V   E  +K+V++  + FG++DILVN A      +F   +E+     +  
Sbjct: 62  GGKAVANYDSV---EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEED----WDL 114

Query: 118 VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAV 177
           VM +   G+F +   A  Y++K   GR       I+N S+      ++ Q + +AAK  +
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRKQKFGR-------IINTSSAAGLYGNFGQANYSAAKLGL 167

Query: 178 DAITRNLALEWGADYDIRVNGIAPG 202
             ++  LA+E GA Y+I  N IAP 
Sbjct: 168 LGLSNTLAIE-GAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 97.2 bits (242), Expect = 7e-24
 Identities = 73/263 (27%), Positives = 109/263 (41%), Gaps = 23/263 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +GKV ++TG   GIG  ++ +    GA V ++ R + V +   + + + G  A     D
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVL-AEILAAGDAAHVHTAD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMC 130
           +     A+ VV +  E FG++D+L+N   G       E          +      T   C
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
              L       P       G I+N+S+    T   Y+I  +AAK  V+A+T +LA E  A
Sbjct: 121 RAVL-------PHMLERQQGVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASLAFEH-A 170

Query: 191 DYDIRVNGIAPGPIGDTPGM---NKLAPDE--------INSKARDYMPLYKLGEKWDIAM 239
              IRVN +APG     P     N     E        I  +  D   + + G   +   
Sbjct: 171 RDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVR 230

Query: 240 AALYLTSDTGKYVNGTTLIVDGG 262
           A L+L SD   Y+ GT L V GG
Sbjct: 231 AILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 96.8 bits (241), Expect = 8e-24
 Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 15/255 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GK AL+TG G GIG        K GA V  + R +  LD+ V      GI+ V    D
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVR--ECPGIEPV--CVD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   +  ++ + S     G +D+LVN AA   L    +++   F    D++      +  
Sbjct: 61  LSDWDATEEALGSV----GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              + +   G        GSI+N+S+     A        + KAA+D +T+ +ALE G  
Sbjct: 117 IVARGMIARGVP------GSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGP- 169

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           + IRVN + P  +    G +  +  E   K  + +PL K  E  D+  A L+L SD    
Sbjct: 170 HKIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSM 229

Query: 252 VNGTTLIVDGGLWLS 266
             G+TL VDGG   S
Sbjct: 230 TTGSTLPVDGGFLAS 244

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 96.6 bits (241), Expect = 2e-23
 Identities = 79/274 (28%), Positives = 118/274 (43%), Gaps = 41/274 (14%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK+ ++TGG SGIG  I  +   +GA+V          +A +               D
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVV---------NADIHGGDGQHENYQFVPTD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNF---LVSAED------LSPNGFRTVMDID 122
           V   E     V    E FG++D LVN A  N    LV  +D      L+   F  + +I+
Sbjct: 58  VSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNIN 117

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
             G F M     + + K          G I+N+S+      S  Q   AA KAA+++ TR
Sbjct: 118 QKGVFLMSQAVARQMVK-------QHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTR 170

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR---------DY-----MPL 228
           + A E G  ++IRV G+APG I +  G+     +E  +  R          Y     +PL
Sbjct: 171 SWAKELG-KHNIRVVGVAPG-ILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL 228

Query: 229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            + G+  ++A    YL SD   Y+ G T  + GG
Sbjct: 229 GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262

Length = 266

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 96.3 bits (239), Expect = 2e-23
 Identities = 77/253 (30%), Positives = 119/253 (47%), Gaps = 12/253 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK ALITG  +GIG  ++  + + GA VAI  R    L+     + + G K V    D
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE-DLSPNGFRTVMDIDSVGTFTMC 130
           V + +    +++      G +DI V   AG   V+   D+    F+ + + +  G F   
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAV-CNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTA 125

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI-HVAAAKAAVDAITRNLALEWG 189
             A K + K G      GG  I   S + H      Q+ H  A+KAAV  +T+ +A+E  
Sbjct: 126 QAAAKAMVKQG-----QGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVEL- 179

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A + IRVN ++PG I  T  +      E        +PL +LG   ++A   LYL S+  
Sbjct: 180 APHKIRVNSVSPGYI-LTELVEPYT--EYQPLWEPKIPLGRLGRPEELAGLYLYLASEAS 236

Query: 250 KYVNGTTLIVDGG 262
            Y+ G+ +++DGG
Sbjct: 237 SYMTGSDIVIDGG 249

Length = 253

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 95.8 bits (239), Expect = 2e-23
 Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 23/261 (8%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
           KG VA++TGG SG+G     +    GA V I+        +    +  LG        DV
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPN----SPGETVAKLGDNCRFVPVDV 56

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNG--------FRTVMDIDSV 124
             ++  K  +      FG+LDI+VN A     V+A+  +  G        F+ V++++ +
Sbjct: 57  TSEKDVKAALALAKAKFGRLDIVVNCAG--IAVAAKTYNKKGQQPHSLELFQRVINVNLI 114

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGG--GSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
           GTF +   A   + K  P     GG  G I+N ++   +     Q   +A+K  +  +T 
Sbjct: 115 GTFNVIRLAAGAMGKNEP---DQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTL 171

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
            +A +      IRV  IAPG + DTP +  L     +  A+      +LG+  + A    
Sbjct: 172 PIARDLAPQ-GIRVVTIAPG-LFDTPLLAGLPEKVRDFLAKQVPFPSRLGDPAEYAHLVQ 229

Query: 243 YLTSDTGKYVNGTTLIVDGGL 263
           ++  +   Y+NG  + +DG +
Sbjct: 230 HIIEN--PYLNGEVIRLDGAI 248

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.1 bits (237), Expect = 3e-23
 Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK ALITG G GIG  ++    K G +V ++ R ++ L A    + + G+K V    D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           V   E     +E      G +DIL+N A     G FL    +L P  +  ++ ++ +G +
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFL----ELDPAEWEKIIQVNLMGVY 120

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATL----HYTASWYQIHVAAAKAAVDAITRN 183
                 L  +            G I+NIS+T         S Y    +A+K  V  +T +
Sbjct: 121 YATRAVLPSMI-------ERQSGDIINISSTAGQKGAAVTSAY----SASKFGVLGLTES 169

Query: 184 LALEWGADYDIRVNGIAP 201
           L  E    ++IRV  + P
Sbjct: 170 LMQEV-RKHNIRVTALTP 186

Length = 239

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 95.4 bits (238), Expect = 3e-23
 Identities = 81/282 (28%), Positives = 115/282 (40%), Gaps = 65/282 (23%)

Query: 11  ILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGR----RKQVLDAAVSALRSLGIK 64
           +L+GK  LI G  +   I + I+    + GA +A   +     K+V + A      LG  
Sbjct: 3   LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELA----EELGSD 58

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFR 116
            V    DV   E    +  +  + +GKLD LV++ A        G++L    D S  GF 
Sbjct: 59  LV-LPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYL----DTSREGFL 113

Query: 117 TVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-----YQIHV 170
             MDI S  +FT +   A   +           GGSIL    TL Y  S      Y + +
Sbjct: 114 IAMDI-SAYSFTALAKAARPLMN---------NGGSIL----TLTYLGSERVVPNYNV-M 158

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK 230
             AKAA++A  R LA + G    IRVN I+ GPI        LA     S   D+  + K
Sbjct: 159 GVAKAALEASVRYLAADLGK-EGIRVNAISAGPI------RTLA----ASGIGDFRKMLK 207

Query: 231 LGEKW----------DIAMAALYLTSDTGKYVNGTTLIVDGG 262
             E            ++   A +L SD    + G  + VD G
Sbjct: 208 ENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG 249

Length = 259

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.6 bits (236), Expect = 7e-23
 Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 16/261 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVR 73
            VAL+TGG  GIG  I+      G  +AI  R   + L A    LR+LG++ + F  DV 
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAA------GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
                + ++++    +G++D LVN A       G+ L    DL+P  F  V+ I+  G F
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL----DLTPESFDRVLAINLRGPF 118

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +     K +    P        SI+ +S+      S  +     +KA +    +  A  
Sbjct: 119 FLTQAVAKRM-LAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAAR 177

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-PLYKLGEKWDIAMAALYLTS 246
             A+  I V  + PG I  T  M      + ++     + P+ + GE  D+A A   L S
Sbjct: 178 L-AEEGIGVYEVRPGLI-KTD-MTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALAS 234

Query: 247 DTGKYVNGTTLIVDGGLWLSR 267
               Y  G  + VDGGL + R
Sbjct: 235 GDLPYSTGQAIHVDGGLSIPR 255

Length = 256

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 94.3 bits (235), Expect = 9e-23
 Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 28/274 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG- 70
           L+G+VA++TGG SGIG        + GASVAI GR ++ L +A + LR     A      
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 71  -DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV  +        +    FG +D+LVN A    + +  D + + +R  +++        
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINP 125

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               L  L+        +   SI+ +++ L      + +  +AA+A +  + ++LA E  
Sbjct: 126 TRAFLPLLRA-------SAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATEL- 177

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY------------MPLYKLGEKWDI 237
           A   +RVN I  G + ++ G  +   +      + +            +PL +LG   + 
Sbjct: 178 APKGVRVNSILLG-LVES-GQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEA 235

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHL 271
           A A  +L S    Y  G+ + V GG      RH+
Sbjct: 236 ARALFFLASPLSSYTTGSHIDVSGGF----ARHV 265

Length = 265

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 94.2 bits (234), Expect = 1e-22
 Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 19/262 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK A++TG  SGIG EI+ +  + GA+VAI    +   +A    +   G KA+G   D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++     ++   E FG +DILV+ A    +   E+ S   ++ +  I   G F    
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTK 124

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            ALK++ K         GG ++ + +   + AS  +     AK  +  + R LA E GA 
Sbjct: 125 AALKHMYK------DDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE-GAK 177

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPD---EINSKARDYMPLYKLGEK--------WDIAMA 240
           +++R + + PG +  TP ++K  P+   E+     + +    LG+          D+A  
Sbjct: 178 HNVRSHVVCPGFV-RTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQT 236

Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
            L+L+S     + G + +V  G
Sbjct: 237 VLFLSSFPSAALTGQSFVVSHG 258

Length = 262

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 93.4 bits (232), Expect = 2e-22
 Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA---VSALRSLGIKAVGFEGD 71
            +AL+TGG  GIG   +    + G +VA+    +Q L AA   V+ +   G KA   + D
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAV--NYQQNLHAAQEVVNLITQAGGKAFVLQAD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMC 130
           +  +     +  +  +H   L  LVN A   F     E+L+      V+  +  G F  C
Sbjct: 60  ISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCC 119

Query: 131 HEALKYLKKGGPGRSSAGGGSILNI-SATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
            EA+K +      +    GG+I+N+ SA     A    +  AA+K A+D +T  L+LE  
Sbjct: 120 REAVKRMAL----KHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVA 175

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A   IRVN + PG I      +   P  ++ + +  +P+ + G+  ++A A ++L SD  
Sbjct: 176 AQ-GIRVNCVRPGFIYTEMHASGGEPGRVD-RVKSNIPMQRGGQPEEVAQAIVWLLSDKA 233

Query: 250 KYVNGTTLIVDGG 262
            YV G+ + + GG
Sbjct: 234 SYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 92.4 bits (230), Expect = 3e-22
 Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 18/213 (8%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ 75
           V +ITG  SGIG   +  F + GA V +  R  + L      +R LG +A+    DV   
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 76  EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALK 135
              ++  ++  E FG++D  VN A        ED++P  FR V D++ +G       AL 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121

Query: 136 YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD-YDI 194
           +L++ G G        ++N+ + L Y ++  Q   +A+K AV   T +L  E   D   I
Sbjct: 122 HLRRRGGGA-------LINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPI 174

Query: 195 RVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP 227
            V  + P  + +TP             AR YM 
Sbjct: 175 SVTLVQPTAM-NTPF---------FGHARSYMG 197

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 93.1 bits (232), Expect = 3e-22
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 7/130 (5%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           GKV +ITG   GIG  ++ +  + GA + +  R +  L +    L   G +A+    DV 
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
             E  ++++E+    FG +DILVN A       F    E    + F  VM ++ +G    
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRF---DELTDLSVFERVMRVNYLGAVYC 117

Query: 130 CHEALKYLKK 139
            H AL +LK 
Sbjct: 118 THAALPHLKA 127

Length = 263

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 93.5 bits (232), Expect = 3e-22
 Identities = 76/254 (29%), Positives = 115/254 (45%), Gaps = 13/254 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA-VSAL-RSLGIKAVGFE 69
           LK + AL+TGG SGIG   +  + + GA VAI     +  DA  V  +    G KAV   
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFT 128
           GD+  ++ A+ +V    +  G LDI+   A     +    DL+   F+    I+    F 
Sbjct: 107 GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFW 166

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +  EA+  L K         G SI+  S+   Y  S + +  AA KAA+   +R LA + 
Sbjct: 167 LTQEAIPLLPK---------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A+  IRVN +APGPI     ++     +   +     P+ + G+  ++A   +YL S  
Sbjct: 218 -AEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE 276

Query: 249 GKYVNGTTLIVDGG 262
             YV      V GG
Sbjct: 277 SSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 91.8 bits (228), Expect = 4e-22
 Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           K AL+TG   GIG   +      G  V I  R +  L AA +         +G  GDVR 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE---GVLGLAGDVRD 57

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           +   ++ V++  E FG LD LVN A    +   E+L+P  +R V+D +  G F   H+A 
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
             L +        GGG+I+N+ +     A        A+K  +  ++    L+   + +I
Sbjct: 118 PALLR-------RGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDL-REANI 169

Query: 195 RVNGIAPGPI-----GDTPGMN-KLAPDEI 218
           RV  + PG +     G   G   KLAP+++
Sbjct: 170 RVVNVMPGSVDTGFAGSPEGQAWKLAPEDV 199

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 91.9 bits (229), Expect = 2e-21
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 22/219 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +  +V +ITG  +G+G   +  F + GA V ++ R ++ L+A  + +R+ G +A+    D
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVAD 65

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF--TM 129
           V   E  +   +   E  G +D  VN A        ED++P  FR V ++  +G    T+
Sbjct: 66  VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
              AL++++           G+I+ + + L Y +   Q    AAK A+   T +L  E  
Sbjct: 126 A--ALRHMRP-------RDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELL 176

Query: 190 AD-YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP 227
            D   + V  + P  + +TP             AR  +P
Sbjct: 177 HDGSPVSVTMVQPPAV-NTP---------QFDWARSRLP 205

Length = 334

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 90.2 bits (224), Expect = 3e-21
 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 8/256 (3%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           VA++TG   GIG  I+T+    G  +AI            V+ + + G +A+ F+ D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFTMCHE 132
               + +++  +E FG+LD LVN A        +  DL+ + F  ++ I+  G F +   
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY 192
             + + +  P R      SI+ +++   Y  S  +     +KA +   TR LA     + 
Sbjct: 123 VARRMVE-QPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADE- 180

Query: 193 DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-PLYKLGEKWDIAMAALYLTSDTGKY 251
            I V+ I PG I     M     ++ +      + P+ + G+  DIA A   L S    Y
Sbjct: 181 GIAVHEIRPGLI--HTDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLLPY 238

Query: 252 VNGTTLIVDGGLWLSR 267
             G  + +DGGL + R
Sbjct: 239 STGQPINIDGGLSMRR 254

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 88.6 bits (219), Expect = 1e-20
 Identities = 81/264 (30%), Positives = 118/264 (44%), Gaps = 23/264 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL+TG   GIG  I+ +    GA VAI  GR KQ  D  +  + S G KA   E 
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEA 63

Query: 71  DVRRQEHAKKVVESTFEHF------GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           D+   +  KK+VE             ++DILVN A      + E+ +   F  +M ++  
Sbjct: 64  DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIK 123

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT---LHYTASWYQIHVAAAKAAVDAIT 181
             F +  + L  L+           G ++NIS+    L +T S   I    +K A++ +T
Sbjct: 124 APFFLIQQTLPLLR---------AEGRVINISSAEVRLGFTGS---IAYGLSKGALNTMT 171

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
             LA   G +  I VN I PG          L   EI + A +     ++G+  DIA A 
Sbjct: 172 LPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAV 230

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWL 265
            +L S   ++V G  + V GG  L
Sbjct: 231 AFLASSDSRWVTGQIIDVSGGFCL 254

Length = 254

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 88.4 bits (220), Expect = 1e-20
 Identities = 75/286 (26%), Positives = 110/286 (38%), Gaps = 72/286 (25%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-EG 70
           L GK AL+TGG  GIG     +  + GA V    R +   D             V F   
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR--PDDLPEG--------VEFVAA 56

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVN------AAAGNFLVSAED-----LSPNGFRTVM 119
           D+   E    V  +  E  G +DILV+      A AG F    ++     L+ N    V 
Sbjct: 57  DLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVR 116

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS----------ATLHYTASWYQIH 169
            +D          AL       PG  + G G I++++          +T  Y        
Sbjct: 117 -LDR---------ALL------PGMIARGSGVIIHVTSIQRRLPLPESTTAY-------- 152

Query: 170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY---- 225
            AAAKAA+   +++L+ E      +RVN ++PG I  T     LA     +   DY    
Sbjct: 153 -AAAKAALSTYSKSLSKEVAPK-GVRVNTVSPGWIE-TEAAVALAERLAEAAGTDYEGAK 209

Query: 226 ---------MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
                    +PL +  E  ++A    +L SD    + GT  ++DGG
Sbjct: 210 QIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIK 64
           L GK   ITG   GIG  I+ +  + GA+V I  +  +        +  A   + + G K
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           A+    D+R ++  +  VE   E FG +DILVN A+   L    D     +  +M +++ 
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTR 120

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA--AAKAAVDAITR 182
           GT+      L YLKK            ILN+S  L+    W++ H A   AK  +     
Sbjct: 121 GTYLCSKACLPYLKKS-------KNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVL 173

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR 223
            +A E+     I VN + P     T  MN L   ++ +  R
Sbjct: 174 GMAEEFKPG-GIAVNALWPRTAIATAAMNMLGGVDVAACCR 213

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 87.6 bits (217), Expect = 2e-20
 Identities = 77/254 (30%), Positives = 113/254 (44%), Gaps = 15/254 (5%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVR 73
           KV LITG   GIG   +      G SV I   R     +    A+R+ G +A    GDV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE----DLSPNGFRTVMDIDSVGTFTM 129
            +     + ++    FG+LD LVN A    +V+      D+     R + D + +G +  
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAG---IVAPSMPLADMDAARLRRMFDTNVLGAYLC 119

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-IHVAAAKAAVDAITRNLALEW 188
             EA + L     GR    GG+I+N+S+      S  + +  A +K AVD +T  LA E 
Sbjct: 120 AREAARRLSTDRGGR----GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKEL 175

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           G    +RVN + PG I      +   P    ++     PL + GE  ++A   ++L SD 
Sbjct: 176 GPH-GVRVNAVRPGLIETEIHASGGQPGRA-ARLGAQTPLGRAGEADEVAETIVWLLSDA 233

Query: 249 GKYVNGTTLIVDGG 262
             YV G  L V GG
Sbjct: 234 ASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 87.2 bits (216), Expect = 3e-20
 Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 28/254 (11%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFE 69
           +L  ++ L+TG   GIG E +  + ++GA+V ++GR ++ L      +   G  +   F 
Sbjct: 1   LLNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFI 60

Query: 70  GDVRR--QEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGT 126
            D+     E+ +++ +    ++ +LD +L NA     +    + +P  ++ V  ++   T
Sbjct: 61  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           F +    L  L K       +  GS++  S+++           A +K A + + + LA 
Sbjct: 121 FMLTQALLPLLLK-------SDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLAD 173

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDE---INSKARDYMPLYKLGEKWDIAMAALY 243
           E+    ++RVN I PG    T       P E         D MPLY            L+
Sbjct: 174 EY-QQRNLRVNCINPGGT-RTAMRASAFPTEDPQKLKTPADIMPLY------------LW 219

Query: 244 LTSDTGKYVNGTTL 257
           L  D  +   G T 
Sbjct: 220 LMGDDSRRKTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 87.6 bits (217), Expect = 3e-20
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 17/259 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG  I+ + GK G  V +  R ++ L   V  LR  G++A G   DVR 
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRS 63

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +    +G +D+LVN A  +   +  +L+   +  V++ +  G F +  E  
Sbjct: 64  VPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEV- 122

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
             LK GG      G G I+NI++T       +    +A+K  V   T+ L LE  A   I
Sbjct: 123 --LKAGGMLER--GTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 177

Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +PL +     ++A    YL
Sbjct: 178 TVNAVCPGFV-ETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYL 236

Query: 245 TSDTGKYVNGTTLIVDGGL 263
             D    V    L V GGL
Sbjct: 237 IGDGAAAVTAQALNVCGGL 255

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 86.9 bits (215), Expect = 4e-20
 Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 31/261 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ AL+TG   GIG EI+      GA V + G R + L+A  +    LG +   F  +
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA---ELGERVKIFPAN 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFL-VSAEDLSPNGFRTVMDIDSVGT 126
           +  ++  K + +        +DILVN A     G F+ +S ED     + +V++++   T
Sbjct: 61  LSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDED-----WDSVLEVNLTAT 115

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           F +  E    + +   GR       I+NI++ +  T +  Q +  A+KA +   +++LA 
Sbjct: 116 FRLTRELTHPMMRRRYGR-------IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQ 168

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD----YMPLYKLGEKWDIAMAAL 242
           E  A  ++ VN +APG I            ++N K ++     +P+ ++G   ++A A  
Sbjct: 169 EI-ATRNVTVNCVAPGFI------ESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVA 221

Query: 243 YLTSDTGKYVNGTTLIVDGGL 263
           YL S    YV G T+ V+GG+
Sbjct: 222 YLASSEAAYVTGQTIHVNGGM 242

Length = 245

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 84.5 bits (210), Expect = 5e-20
 Identities = 42/180 (23%), Positives = 68/180 (37%), Gaps = 20/180 (11%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAA--VSALRSLGIKAVGFEGD 71
              LITGG  G+G  ++      GA   ++  RR     AA  V+ L +LG +      D
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++    ++ +     G LD +V+ A        E+L+P  F  V+     G + +  
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNIS---ATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
                             G+ +  S     L       Q + AAA AA+DA+  +   E 
Sbjct: 121 LTRD-----------LDLGAFVLFSSVAGVLGSPG---QANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 86.8 bits (215), Expect = 5e-20
 Identities = 62/255 (24%), Positives = 104/255 (40%), Gaps = 25/255 (9%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
            ++TG   GIG  ++    + GA+V  +     +L      LR           DV    
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL-------TPLDVADAA 53

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             ++V        G +D LVN A      + + LS   +     ++  G F +      +
Sbjct: 54  AVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPH 113

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
           +K           G+I+ +++   +          A+KAA+ ++++ L LE  A Y +R 
Sbjct: 114 MK-------DRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLEL-APYGVRC 165

Query: 197 NGIAPGPIGDTPGMNKLAPDE------INSKARDY---MPLYKLGEKWDIAMAALYLTSD 247
           N ++PG   DT     L  DE      I      +   +PL K+ +  DIA A L+L SD
Sbjct: 166 NVVSPGST-DTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASD 224

Query: 248 TGKYVNGTTLIVDGG 262
              ++    L+VDGG
Sbjct: 225 QAGHITMHDLVVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.7 bits (215), Expect = 5e-20
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 38/265 (14%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           LK KV ++TG G GIG  I+ +  K G+ V +   +R + ++  +  ++  G + +G   
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGT 126
           DV  +E  + + ++T + +G  DILVN A       FL   + L      T  D  SV  
Sbjct: 64  DVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHIST--DFKSV-- 119

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATL----HYTASWYQIHVAAAKAAVDAITR 182
              C + L         +    GG+I+NI++       Y  S Y     A KAAV  +T+
Sbjct: 120 -IYCSQEL--------AKEMREGGAIVNIASVAGIRPAYGLSIY----GAMKAAVINLTK 166

Query: 183 NLALEWGADYDIRVNGIAPG----PIGDT-PGMNKLAPDEINSKARDYMPLYKLGEKWDI 237
            LALE      IRVN IAPG     +G++   +  ++  E    A  +  + K+ +  ++
Sbjct: 167 YLALELAP--KIRVNAIAPGFVKTKLGESLFKVLGMSEKEF---AEKFTLMGKILDPEEV 221

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGG 262
           A     +       + G   ++D G
Sbjct: 222 AEFVAAILKIES--ITGQVFVLDSG 244

Length = 252

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 85.9 bits (213), Expect = 7e-20
 Identities = 77/255 (30%), Positives = 111/255 (43%), Gaps = 39/255 (15%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           L+ GG SGIG  ++  F   GA V I  R +  L AA  AL   G        D+  +  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAA 59

Query: 78  AKKVVESTFEHFGKLDILVNAAA--GNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALK 135
               V++ F   G  D +V  AA      V A  L+    +  MD    G + +   A  
Sbjct: 60  ----VDAFFAEAGPFDHVVITAADTPGGPVRALPLA--AAQAAMDSKFWGAYRVARAA-- 111

Query: 136 YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIR 195
                      A GGS+  +S       S   +   A  AA++A+ R LALE      +R
Sbjct: 112 ---------RIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP---VR 159

Query: 196 VNGIAPGPIGDTPGMNKLAPDEINSKARDYM--------PLYKLGEKWDIAMAALYLTSD 247
           VN ++PG + DTP  +KLA D     AR+ M        P  ++G+  D+A A L+L   
Sbjct: 160 VNTVSPGLV-DTPLWSKLAGD-----AREAMFAAAAERLPARRVGQPEDVANAILFLA-- 211

Query: 248 TGKYVNGTTLIVDGG 262
              +  G+T++VDGG
Sbjct: 212 ANGFTTGSTVLVDGG 226

Length = 230

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 86.1 bits (214), Expect = 7e-20
 Identities = 68/268 (25%), Positives = 110/268 (41%), Gaps = 43/268 (16%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GK   +TG   GIG+ ++  F + GA V          D A             F  D
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVI-------GFDQAFLTQEDYPFAT--FVLD 56

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V       +V +      G LD+LVNAA    + + + LS   ++    +++ G F +  
Sbjct: 57  VSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFR 116

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV--------AAAKAAVDAITRN 183
             +   +     RS    G+I+ + +     A+    HV         A+KAA+ ++ + 
Sbjct: 117 AVMPQFR---RQRS----GAIVTVGS----NAA----HVPRIGMAAYGASKAALTSLAKC 161

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE------INSKARDY---MPLYKLGEK 234
           + LE  A Y +R N ++PG   DT     L  DE      I      +   +PL K+   
Sbjct: 162 VGLEL-APYGVRCNVVSPGST-DTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARP 219

Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            +IA A L+L SD   ++    ++VDGG
Sbjct: 220 QEIANAVLFLASDLASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 86.1 bits (214), Expect = 1e-19
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 17/198 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEG 70
           +KGK ALITG  SGIG E++ Q  + G ++ ++ RR+  L+A    L    G++      
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGT 126
           D+   E  +++ +   E  G +D+LVN A     G FL    +LS +    ++ ++ +  
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL----ELSLDEEEEMIQLNILAL 119

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
             +    L  + +        G G I+NI +      + Y    +A KA V + +  L  
Sbjct: 120 TRLTKAVLPGMVE-------RGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALRE 172

Query: 187 EWGADYDIRVNGIAPGPI 204
           E      ++V  + PGP 
Sbjct: 173 EL-KGTGVKVTAVCPGPT 189

Length = 265

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 85.6 bits (212), Expect = 1e-19
 Identities = 64/200 (32%), Positives = 91/200 (45%), Gaps = 20/200 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEG 70
           LKG+V L+TGG SG+G  I  +F   GA VA++ +      A +  L +  G   VG EG
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEG 58

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVS----AEDLSPNGFRTVMDIDSVG 125
           DVR  +  K+ V      FGK+D L+ NA   ++  +     +D     F  V  I+  G
Sbjct: 59  DVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKG 118

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
                  AL  L        ++ G  I  IS    Y      ++  AAK AV  + + LA
Sbjct: 119 YLLAVKAALPAL-------VASRGSVIFTISNAGFYPNGGGPLY-TAAKHAVVGLVKELA 170

Query: 186 LEWGADYDIRVNGIAPGPIG 205
            E      +RVNG+APG + 
Sbjct: 171 FELAP--YVRVNGVAPGGMS 188

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 1e-19
 Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 25/262 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGAS-VAI---MGRRKQVLDAAVSALRSLGIKAVG 67
           LKGKV LI GG   +G  I+      GA  VAI       K   +  V+A+++ G KAV 
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           F+ D+      +K+ +     FG+ DI +N           ++S   +  +  ++S   F
Sbjct: 66  FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATL--HYTASWYQIHVAAAKAAVDAITRNLA 185
               EA         GR     G I+ +  +L   +T  +Y  + A +KA V+  TR  +
Sbjct: 126 FFIKEA---------GRHLNDNGKIVTLVTSLLGAFT-PFYSAY-AGSKAPVEHFTRAAS 174

Query: 186 LEWGADYDIRVNGIAPGPIGDTP---GMNKLAPDEINSKARDYMPLYKLG--EKWDIAMA 240
            E+GA   I V  + PGP+ DTP             +  A    P  K G  +  DI   
Sbjct: 175 KEFGAR-GISVTAVGPGPM-DTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPF 232

Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
             +L +D G ++ G T++++GG
Sbjct: 233 IRFLVTD-GWWITGQTILINGG 253

Length = 257

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 85.4 bits (212), Expect = 2e-19
 Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 45/274 (16%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVG---- 67
           LKGK  LITG G  IG  +     + G  V          D    AL  L ++++G    
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAA-------DIDKEALNEL-LESLGKEFK 53

Query: 68  ------FEGDVRRQEHAKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTV 118
                  E D+  QE  ++ +  + E +GK+D  VN A     ++     D+S + F   
Sbjct: 54  SKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNEN 113

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL--------HY--TASWYQI 168
           + +    +F    +  KY KK        GGG+++NIS+           Y  T+    +
Sbjct: 114 LSLHLGSSFLFSQQFAKYFKK-------QGGGNLVNISSIYGVVAPKFEIYEGTSMTSPV 166

Query: 169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL 228
             AA KA +  +T+ LA  +  D +IRVN ++PG I D        P+   +  +     
Sbjct: 167 EYAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDN------QPEAFLNAYKKCCNG 219

Query: 229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             + +  DI    ++L SD  KY+ G  +IVD G
Sbjct: 220 KGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253

Length = 256

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 86.8 bits (215), Expect = 4e-19
 Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 27/275 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM---GRRKQVLDAAVSALRSLGIKAVGF 68
           L  +VA +TGG  GIG E + +    GA V +        + + A ++     G +AV  
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAG-RAVAL 470

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           + DV  ++  K         +G +DI+VN A        E+ +   ++  +DI + G F 
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFL 530

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +  EA + +++ G       GG+I+ I++     A       +AAKAA   + R LA E 
Sbjct: 531 VAREAFRQMREQGL------GGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAE- 583

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-MPLYKLGEKW------------ 235
           G  Y IRVN + P  +    G+     +    +A  Y +P  +L E +            
Sbjct: 584 GGTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFP 641

Query: 236 -DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPR 269
            DIA A  +L S   +   G  + VDGG+  +  R
Sbjct: 642 ADIAEAVFFLASSKSEKTTGCIITVDGGVPAAFLR 676

Length = 676

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 83.9 bits (208), Expect = 6e-19
 Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 27/264 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEG 70
           L GK  LITG   GIG   +  F   G  + ++ R    L+A  + LR+  G+       
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+   E  +++        G +DILVN A        +D+    +R   ++   G   + 
Sbjct: 65  DLSSPEAREQLAAEA----GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLT 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNI--SATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
             A   +K       + G G I+N+  +A  +  A +  I  +A  AA+ A TR L  + 
Sbjct: 121 RLAYPRMK-------ARGSGVIVNVIGAAGENPDADY--ICGSAGNAALMAFTRALGGK- 170

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKL----APDEINSKAR-----DYMPLYKLGEKWDIAM 239
             D  +RV G+ PGP+  T  M  L    A  E+  ++R       +PL +     ++A 
Sbjct: 171 SLDDGVRVVGVNPGPVA-TDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVAD 229

Query: 240 AALYLTSDTGKYVNGTTLIVDGGL 263
              +L S    Y +GT + VDGG+
Sbjct: 230 LVAFLASPRSGYTSGTVVTVDGGI 253

Length = 259

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 16/193 (8%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVR 73
           K  LITG  SGIG   + +F K GA + + GRR + L      L +   +K +  + DV 
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
            +E  +  +E+  E F  +DILVN A    G  L  A++     + T++D +  G   + 
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALG--LDPAQEADLEDWETMIDTNVKGLLNVT 118

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATL-HYTASWYQIHVAAAKAAVDAITRNLALEWG 189
              L       P   +   G I+N+ +    Y  +   ++  A KAAV   + NL  +  
Sbjct: 119 RLIL-------PIMIARNQGHIINLGSIAGRYPYAGGNVY-CATKAAVRQFSLNLRKDL- 169

Query: 190 ADYDIRVNGIAPG 202
               IRV  I PG
Sbjct: 170 IGTGIRVTNIEPG 182

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 1e-17
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 25/209 (11%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           +ITG  SG+G  I+ ++ + G  +A+    ++  +  +  LR  G        DVR    
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 78  AKKVVESTFEHFGKLDILVN----AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
              + ++  E +G +D++VN    A+ G F    E+LS   +   + I+ +G    C   
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVASGGFF----EELSLEDWDWQIAINLMGVVKGCKAF 119

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           L   K+          G I+NI++               AKA V A++  L +E  AD +
Sbjct: 120 LPLFKR-------QKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVEL-ADDE 171

Query: 194 IRVNGIAPGPI---------GDTPGMNKL 213
           I V+ + P            G  P M   
Sbjct: 172 IGVHVVCPSFFQTNLLDSFRGPNPAMKAQ 200

Length = 270

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 80.7 bits (199), Expect = 1e-17
 Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 28/272 (10%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALRSLGIKAVGFEGD 71
            A++TG    IG  I+    + G  V +   R       L A ++A R     AV  + D
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP--NSAVTCQAD 60

Query: 72  VRRQ----EHAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTVMDIDSV 124
           +          + ++++ F  FG+ D+LVN A+  +   L+  +     G +  +++   
Sbjct: 61  LSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVA 120

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGG-------SILNI-SATLHYTASWYQIHVAAAKAA 176
             F     A  +L K    R +           SI+N+  A        + ++   AK A
Sbjct: 121 ELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMY-TMAKHA 179

Query: 177 VDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKL-GEKW 235
           ++ +TR+ ALE  A   IRVNG+APG       M    P E+    R  +PL +      
Sbjct: 180 LEGLTRSAALEL-APLQIRVNGVAPGLSLLPDAM----PFEVQEDYRRKVPLGQREASAE 234

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
            IA   ++L S   KY+ GT + VDGGL L+R
Sbjct: 235 QIADVVIFLVSPKAKYITGTCIKVDGGLSLTR 266

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 1e-17
 Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 23/264 (8%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD--AAVSALRSLGIKAVGFEG 70
             +VA++ GGG  +G  +     + G  VA+     +     A           A GF  
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFT 128
           D   ++    +     E FG++D+LV   AG    +A   D     F   + ++ VG F 
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLV-YNAG-IAKAAFITDFQLGDFDRSLQVNLVGYFL 118

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
              E  + + + G        G I+ I++      S +    +AAK     +T++LAL+ 
Sbjct: 119 CAREFSRLMIRDGI------QGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL 172

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAP----------DEINSKARDYMPLYKLGEKWDIA 238
            A+Y I V+ +  G +  +P    L P          DE+     D +PL +  +  D+ 
Sbjct: 173 -AEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL 231

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
              L+  S    Y  G ++ V GG
Sbjct: 232 NMLLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 79.4 bits (196), Expect = 2e-17
 Identities = 74/256 (28%), Positives = 107/256 (41%), Gaps = 29/256 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGK   I G   G+G+ ++    K GA V I  R +  L      L   G       GD
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVGD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   E A+ V+E   +    +D LV    G    + E+ S  G   ++           +
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFS--GLEEMLTNHIKIPLYAVN 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLH-YTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            +L++LK+         G SI+ +S+    Y AS  Q+  A AKA +      LA E   
Sbjct: 120 ASLRFLKE---------GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASEL-L 169

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW----DIAMAALYLTS 246
              IRVNGIAP  I          P+      R++  L KLG+      D A   ++L +
Sbjct: 170 GRGIRVNGIAPTTI-----SGDFEPE------RNWKKLRKLGDDMAPPEDFAKVIIWLLT 218

Query: 247 DTGKYVNGTTLIVDGG 262
           D   +V+G  + VDGG
Sbjct: 219 DEADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 79.4 bits (196), Expect = 2e-17
 Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 26/257 (10%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           + AL+TG   GIG  ++ +F   G  V  +      L A   AL       V    D+  
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVAC--DLTD 60

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
                  + +     G +D+LV  A      S  D +P  +R    ++    + +C EA+
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY-LCVEAV 119

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV------AAAKAAVDAITRNLALEW 188
                   G      G+++NI        S   +        +AAKA +   T+ LA+E+
Sbjct: 120 L------EGMLKRSRGAVVNI-------GSVNGMAALGHPAYSAAKAGLIHYTKLLAVEY 166

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEIN--SKARDYMPLYKLGEKWDIAMAALYLTS 246
           G  + IR N +APG +  T               + + + PL       D+A A L+L S
Sbjct: 167 GR-FGIRANAVAPGTV-KTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLAS 224

Query: 247 DTGKYVNGTTLIVDGGL 263
              + + G  L VDGGL
Sbjct: 225 PAARAITGVCLPVDGGL 241

Length = 257

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 78.5 bits (194), Expect = 4e-17
 Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 23/210 (10%)

Query: 10  DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
             L G   LITGG SGIG  ++ +F + G +V I GRR++ L  A   L ++    +   
Sbjct: 1   MKLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTIVL--- 57

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAG-----NFLVSAEDLSPNGFRTVMDIDSV 124
            DV   E  + + E+    +  LDIL+N  AG     +    A DL  +   T +D + +
Sbjct: 58  -DVGDAESVEALAEALLSEYPNLDILIN-NAGIQRPIDLRDPASDL--DKADTEIDTNLI 113

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
           G   +    L +LKK           +I+N+S+ L +          A KAA+ + T  L
Sbjct: 114 GPIRLIKAFLPHLKK-------QPEATIVNVSSGLAFVPMAANPVYCATKAALHSYT--L 164

Query: 185 ALEWG-ADYDIRVNGIAPGPIGDTPGMNKL 213
           AL     D  + V  I P P  DT    + 
Sbjct: 165 ALRHQLKDTGVEVVEIVP-PAVDTELHEER 193

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 78.7 bits (194), Expect = 5e-17
 Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 26/266 (9%)

Query: 12  LKGKVALITGGG--SGIGFEISTQFGKHGASVAIM-----------GRRKQVLDAAVSAL 58
           LK KVA++TG     GIG  I  +  + GA +              G  +         L
Sbjct: 4   LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL 63

Query: 59  RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
              G+K    E D+ + +  K+++    E  G   ILVN AA +      +L+       
Sbjct: 64  LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKH 123

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
             ++   T  +  +  +   K         GG I+N+++         ++  AA K A+D
Sbjct: 124 YMVNVRATTLLSSQFARGFDKK-------SGGRIINMTSGQFQGPMVGELAYAATKGAID 176

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
           A+T +LA E  A   I VN I PGP  DT  M     +EI        P  ++GE  D A
Sbjct: 177 ALTSSLAAEV-AHLGITVNAINPGPT-DTGWMT----EEIKQGLLPMFPFGRIGEPKDAA 230

Query: 239 MAALYLTSDTGKYVNGTTLIVDGGLW 264
               +L S+  +++ G  +  +GG  
Sbjct: 231 RLIKFLASEEAEWITGQIIHSEGGFK 256

Length = 256

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 78.1 bits (193), Expect = 6e-17
 Identities = 58/199 (29%), Positives = 79/199 (39%), Gaps = 26/199 (13%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR-RQE 76
            ITG  SGIG   +  F   G  V      +  L A  + L +    A     DV  R  
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGN--AWTGALDVTDRAA 62

Query: 77  HAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
               + +      G+LD+L N A     G F    ED+       V+DI+  G     H 
Sbjct: 63  WDAALADFAAATGGRLDVLFNNAGILRGGPF----EDIPLEAHDRVIDINVKGVLNGAHA 118

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA---AAKAAVDAITRNLALEWG 189
           AL YLK          G  ++N S+    +A + Q  +A   A K AV  +T  L LEW 
Sbjct: 119 ALPYLKA-------TPGARVINTSSA---SAIYGQPGLAVYSATKFAVRGLTEALDLEW- 167

Query: 190 ADYDIRVNGIAPGPIGDTP 208
             + IRV  + P  + DT 
Sbjct: 168 RRHGIRVADVMPLFV-DTA 185

Length = 260

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 77.6 bits (191), Expect = 1e-16
 Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 17/242 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV-GFEG 70
            +G+VAL+TG   GIG  ++    +HG  V    RR   ++A  +  +S G   +  ++ 
Sbjct: 4   WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           D+  +E    +  +       +D+ +N A       L+S       G++ + D++ +   
Sbjct: 64  DLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSG---KTEGWKEMFDVNVLALS 120

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATL-HYTASWYQIHV-AAAKAAVDAITRNLA 185
               EA + +K+          G I+NI++   H        H  AA K AV A+T  L 
Sbjct: 121 ICTREAYQSMKERNVDD-----GHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLR 175

Query: 186 LEW-GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            E   A   IR   I+PG + +T    KL  ++    A  Y  +  L  + D+A A LY+
Sbjct: 176 QELREAKTHIRATSISPGLV-ETEFAFKLHDNDPEKAAATYESIPCLKPE-DVANAVLYV 233

Query: 245 TS 246
            S
Sbjct: 234 LS 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 20/206 (9%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG 70
           +     ALITG  SGIG   +  F K G  +A++ R +  L+A  + LRS G+KA  +  
Sbjct: 3   LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSI 62

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+   E     +    E FG  D+L+N A   +     ++  + ++ V+ ++    F  C
Sbjct: 63  DLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCC 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTA--SW--YQIHVAAAKAAVDAITRNLAL 186
              L       PG  + GGG I+N+S+     A   W  Y      +KAA+ A T+ LA 
Sbjct: 123 SAVL-------PGMRARGGGLIINVSSIAARNAFPQWGAY----CVSKAALAAFTKCLAE 171

Query: 187 EWGADYDIRVNGIAPG----PIGDTP 208
           E  + + IRV  I  G    P+ DT 
Sbjct: 172 EERS-HGIRVCTITLGAVNTPLWDTE 196

Length = 241

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 3e-16
 Identities = 71/272 (26%), Positives = 110/272 (40%), Gaps = 38/272 (13%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI-------------MGRRKQVLDAAVSA 57
           +L G+V ++TG G GIG   +  F   GA V +                 + V+D  V+A
Sbjct: 3   LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA 62

Query: 58  LRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNG 114
               G +AV    D+   + A  +V++  E FG LD+LVN A       + +   +S   
Sbjct: 63  ----GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIAN---MSEEE 115

Query: 115 FRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAG---GGSILNISATLHYTASWYQIHVA 171
           +  V+ +   G F     A  Y +      S AG      I+N S+      S  Q + +
Sbjct: 116 WDAVIAVHLKGHFATLRHAAAYWR----AESKAGRAVDARIINTSSGAGLQGSVGQGNYS 171

Query: 172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGP-IGDTPGMNKLAPDEINSKARDYMPLYK 230
           AAKA + A+T   A E G  Y + VN IAP      T  +      +      D M    
Sbjct: 172 AAKAGIAALTLVAAAELG-RYGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAM---- 226

Query: 231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
                +++   ++L S   + V G    V+GG
Sbjct: 227 --APENVSPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 76.3 bits (188), Expect = 3e-16
 Identities = 60/261 (22%), Positives = 104/261 (39%), Gaps = 18/261 (6%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGD 71
             +VA++ GGG  +G  +     + G  VA+     +     A       G KA GF  D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
              ++    + +   E F ++D+LV +A         D     F   + ++ VG F    
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAR 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           E  K + + G        G I+ I++      S +    +AAK     +T++LAL+  A+
Sbjct: 121 EFSKLMIRDG------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL-AE 173

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAP----------DEINSKARDYMPLYKLGEKWDIAMAA 241
           + I VN +  G +  +P    L P           E+     D +PL +  +  D+    
Sbjct: 174 HGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNML 233

Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
           L+  S    Y  G ++ + GG
Sbjct: 234 LFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 75.9 bits (187), Expect = 3e-16
 Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 21/204 (10%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVAL+TG   GIG EI+    + G  V++  R  + L A         ++AV +  D R 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALS--ASGGDVEAVPY--DARD 56

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
            E A+ +V++  + FG++D+LV+ A      +  + S         I+ +    +    L
Sbjct: 57  PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116

Query: 135 KYLKKGGPGR----SSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             L++ G GR    +S  G  +L  +A   Y+AS         K A+ A+   L  E G 
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAG--YSAS---------KFALRALAHALRQE-GW 164

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA 214
           D+ +RV+ + PG + DTP    L 
Sbjct: 165 DHGVRVSAVCPGFV-DTPMAQGLT 187

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 75.1 bits (185), Expect = 7e-16
 Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 11/213 (5%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA-AVSALRSLGIKAVGFEGDVRR 74
           VA + G G G+G  I+ +F   G SVA+  RR+  L+A  V  +R  G  A     D R 
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           ++    + +   E  G L++LV  A  N      + +P  F  V ++ + G F    EA 
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAA 120

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
           K +        + G G+I+   AT            A AK A+ A+ +++A E G    I
Sbjct: 121 KRM-------LARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPK-GI 172

Query: 195 RV-NGIAPGPIGDTPGMNKLAPDEINSKARDYM 226
            V + I  G I DT  + +  P     K  D +
Sbjct: 173 HVAHVIIDGGI-DTDFIRERFPKRDERKEEDGI 204

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.0 bits (187), Expect = 8e-16
 Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 55/283 (19%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA-LRSLGIKAVGFEG 70
           L GKVA++TG  +G+G   +    + GA+V +      +  + V   +R+ G KAV   G
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGN-----FLVSAEDLSPNGFRTVMDIDSVG 125
           D+ ++  A ++V +     G LDI+VN A        F +S E+     +  V+ +   G
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEE-----WDAVIAVHLRG 123

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGS----ILNISATLHYTASWYQIHVAAAKAAVDAIT 181
            F +   A  Y +     ++ A GG     I+N S+         Q +  AAKA + A+T
Sbjct: 124 HFLLTRNAAAYWR----AKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALT 179

Query: 182 RNLALEWGADYDIRVNGIAP--------GPIGDTP-----GMNKLAPDEINSKARDYMPL 228
            + A   G  Y +R N I P           GD P     G++ L+P+ +    +     
Sbjct: 180 LSAARALGR-YGVRANAICPRARTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQ----- 233

Query: 229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG--LWLSRPR 269
                         +L S     VNG   IV G     ++ P 
Sbjct: 234 --------------FLASPAAAEVNGQVFIVYGPMVTLVAAPV 262

Length = 306

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 9e-16
 Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 21/188 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKV LITG  SGIG   + +  + GA+V ++ R  + LD  V+ +R+ G  A  +  D
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGF----RTVMDIDSVGTF 127
           +         V+      G +D LVN  AG  +  + + S + F    RT M ++  G  
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVN-NAGRSIRRSVENSTDRFHDYERT-MAVNYFGAV 486

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----SWYQIHVAAAKAAVDAITRN 183
            +    L       P       G ++N+S+    T     S Y     A+KAA+DA +  
Sbjct: 487 RLILGLL-------PHMRERRFGHVVNVSSIGVQTNAPRFSAY----VASKAALDAFSDV 535

Query: 184 LALEWGAD 191
            A E  +D
Sbjct: 536 AASETLSD 543

Length = 657

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 71/268 (26%), Positives = 99/268 (36%), Gaps = 51/268 (19%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              K  LITG  SGIG   +  F   GA V   G  KQ                   + D
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQV--YGVDKQDKPDLSGNFHF-------LQLD 53

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL---VSAEDLSPNGFRTVMDIDSVGTFT 128
           +         +E  F+    +DIL N A    L       D S   ++ + D +   TF 
Sbjct: 54  LSDD------LEPLFDWVPSVDILCNTAG--ILDDYKPLLDTSLEEWQHIFDTNLTSTFL 105

Query: 129 MCHEALKYLKKGGPG---------RSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDA 179
           +    L  + +   G            AGGG          YTAS         K A+  
Sbjct: 106 LTRAYLPQMLERKSGIIINMCSIASFVAGGGGAA-------YTAS---------KHALAG 149

Query: 180 ITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDI 237
            T+ LAL++ A   I+V GIAPG +  TP M      P  +        P+ +  E  ++
Sbjct: 150 FTKQLALDY-AKDGIQVFGIAPGAV-KTP-MTAADFEPGGLADWVARETPIKRWAEPEEV 206

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWL 265
           A   L+L S    Y+ GT + +DGG W 
Sbjct: 207 AELTLFLASGKADYMQGTIVPIDGG-WT 233

Length = 235

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 74.1 bits (183), Expect = 2e-15
 Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 38/267 (14%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +    K D+LK ++ L+TG G GIG E +  + +HGA+V ++GR ++ L+A    + + G
Sbjct: 1   MHYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG 60

Query: 63  -IKAVGFEGDVRR--QEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTV 118
             +      D+     ++ +++ ++  E FG+LD +L NA     L   E   P  ++ V
Sbjct: 61  GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDV 120

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL--HYTASW--YQIHVAAAK 174
           M ++   TF +    L  L K       +   S++  S+++     A+W  Y    A +K
Sbjct: 121 MQVNVNATFMLTQALLPLLLK-------SPAASLVFTSSSVGRQGRANWGAY----AVSK 169

Query: 175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSK---ARDYMPLYK 230
            A + + + LA E+    ++RVN I PG  G    M   A P E   K     D MPLY 
Sbjct: 170 FATEGMMQVLADEYQ-GTNLRVNCINPG--GTRTAMRASAFPGEDPQKLKTPEDIMPLY- 225

Query: 231 LGEKWDIAMAALYLTSDTGKYVNGTTL 257
                      LYL  D  +  NG + 
Sbjct: 226 -----------LYLMGDDSRRKNGQSF 241

Length = 247

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 67/287 (23%), Positives = 109/287 (37%), Gaps = 40/287 (13%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGF-EGD 71
           GKV +ITG  SGIG E + +  K GA V I  R ++  + A + ++   G   V   + D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      ++  E     F +LDIL+N A    +     L+ +GF     ++ +G F + +
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGI--MAPPRRLTKDGFELQFAVNYLGHFLLTN 118

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTA------------SWYQIHVA--AAKAAV 177
             L  LK   P R       I+N+S+  H                 Y  + A   +K A 
Sbjct: 119 LLLPVLKASAPSR-------IVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLAN 171

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEK--- 234
              TR LA        + VN + PG +  T  + +              P  K   +   
Sbjct: 172 ILFTRELA-RRLEGTGVTVNALHPGVV-RTELLRR-NGSFFLLYKLLR-PFLKKSPEQGA 227

Query: 235 WDIAMAAL--YLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQL 279
                AA    L   +GKY +   + +      S    L ++  ++L
Sbjct: 228 QTALYAATSPELEGVSGKYFSDCKIKM------SSSEALDEELAEKL 268

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 3e-15
 Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 21/182 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG- 70
           L GKV ++TG   GIG E++ +    GA +A++   +  L A       LG         
Sbjct: 7   LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALA---AELGGDDRVLTVV 63

Query: 71  -DVRRQEHAKKVVESTFEHFGKLDILV-NA---AAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            DV      +   E   E FG +D++V NA   + G+         P+ FR V+D++ +G
Sbjct: 64  ADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVD----PDAFRRVIDVNLLG 119

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
            F      L  L            G +L +S+   + A+       A+KA V+A    L 
Sbjct: 120 VFHTVRATLPAL--------IERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALR 171

Query: 186 LE 187
           LE
Sbjct: 172 LE 173

Length = 296

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 73.4 bits (180), Expect = 4e-15
 Identities = 70/253 (27%), Positives = 112/253 (44%), Gaps = 18/253 (7%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           G+VAL+TG   GIG  I+      G  V ++    +   + V+  ++LG  A     DV 
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQV-VLADLDRERGSKVA--KALGENAWFIAMDVA 66

Query: 74  RQEHAKKVVESTFEHFGKLDILV-NAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
            +      V      FG+LD LV NAA  +    + E LS   +  V+ ++  G   +  
Sbjct: 67  DEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAK 126

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
               YL+        A  G+I+N+++T    +       AA+K  + A+T  LA+  G +
Sbjct: 127 HCAPYLR--------AHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE 178

Query: 192 YDIRVNGIAPGPI-GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             IRVN ++PG I    P   +  P      A+   P  ++G   D+A    +L S    
Sbjct: 179 --IRVNAVSPGWIDARDPSQRRAEPLSEADHAQH--PAGRVGTVEDVAAMVAWLLSRQAG 234

Query: 251 YVNGTTLIVDGGL 263
           +V G   +VDGG+
Sbjct: 235 FVTGQEFVVDGGM 247

Length = 255

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 72.4 bits (177), Expect = 7e-15
 Identities = 75/262 (28%), Positives = 114/262 (43%), Gaps = 23/262 (8%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFE 69
           +LKGKVAL+TG   GIG  I+ +    GA VAI  G RK+  +  V  ++S G  A    
Sbjct: 1   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 60

Query: 70  GDVRRQEHAKKVVESTFEHF------GKLDILVNAAA---GNFLVSAEDLSPNGFRTVMD 120
            ++      + +  S            K DIL+N A    G F+   E+ +   F  ++ 
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI---EETTEQFFDRMVS 117

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAI 180
           +++   F +  +AL  L+             I+NIS+     +    I  +  K A++ +
Sbjct: 118 VNAKAPFFIIQQALSRLRD---------NSRIINISSAATRISLPDFIAYSMTKGAINTM 168

Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
           T  LA + GA   I VN I PG I        L+   +   A       +LGE  DIA  
Sbjct: 169 TFTLAKQLGAR-GITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADT 227

Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
           A +L S   ++V G  + V GG
Sbjct: 228 AAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 72.9 bits (179), Expect = 7e-15
 Identities = 77/273 (28%), Positives = 114/273 (41%), Gaps = 47/273 (17%)

Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF 68
           I+KGK  LI G      I + I+    + GA +A     + +        + LG   V +
Sbjct: 2   IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYV-Y 60

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRTVMD 120
           E DV + EH K + ES  +  GK+D +V++ A        G+FL    + S   F   M+
Sbjct: 61  ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFL----ETSKEAFNIAME 116

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH---VAAAKAAV 177
           I       +    L  L           G S+L +S   +     Y  H   +  AKAA+
Sbjct: 117 ISVYSLIELTRALLPLLND---------GASVLTLS---YLGGVKYVPHYNVMGVAKAAL 164

Query: 178 DAITRNLALEWGADYDIRVNGIAPGP--------IGDTPGMNKLAPDEINSKARDYMPLY 229
           ++  R LA++ G    IRVN I+ GP        IGD   +  L  +EIN+      PL 
Sbjct: 165 ESSVRYLAVDLGKK-GIRVNAISAGPIKTLAASGIGDFRMI--LKWNEINA------PLK 215

Query: 230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
           K     ++  + +YL SD    V G    VD G
Sbjct: 216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248

Length = 274

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 71.5 bits (175), Expect = 1e-14
 Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 11/247 (4%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVRRQE 76
           L+TG   GIG  I+ +    G  + +     +   ++ VSA+++ G  A   + DV  + 
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             + ++E+     G    +V  A      +   LS   +  V+  +  G + + H     
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTM- 120

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
                P   +  GG I+ +++      +  Q++ +AAKA +   T+ LA+E  A   I V
Sbjct: 121 -----PMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVEL-AKRKITV 174

Query: 197 NGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTT 256
           N IAPG I DT  M      +++ +A   +P+ ++G+  ++A  A +L SD   YV    
Sbjct: 175 NCIAPGLI-DT-EMLAEVEHDLD-EALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQV 231

Query: 257 LIVDGGL 263
           + V+GG+
Sbjct: 232 ISVNGGM 238

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 31/250 (12%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
            +V L+ GG   +G  +   F   G  VA +            A  S+ +          
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLA-----ENEEADASIIVLDSDSF---- 51

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAG-NFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
             E AK+VV S     GK+D L+  A G     +        +  +   +   +F   H 
Sbjct: 52  -TEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHL 110

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW-GAD 191
           A K+L  GG      G  + L  +  +        I   AAKAAV  +T++LA E  G  
Sbjct: 111 ATKHLLSGGL-LVLTGAKAALEPTPGM--------IGYGAAKAAVHQLTQSLAAENSGLP 161

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
                N I P  + DTP   K  PD   S    + PL  + E        L+  S   + 
Sbjct: 162 AGSTANAILPVTL-DTPANRKAMPDADFSS---WTPLEFIAELI------LFWASGAARP 211

Query: 252 VNGTTLIVDG 261
            +G+ + V  
Sbjct: 212 KSGSLIPVVT 221

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 18/200 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEG 70
           L GK+AL+TG   GIG  I+ Q G+ GA+V I GR     L      + + G K +    
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 71  DVRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVM----DIDSVG 125
           D    +  + + E       G+LDILVN A     +    ++   +        DI++VG
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 126 ---TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
               +     A   + K       AG G I+ IS +       + +     KAA+D +  
Sbjct: 121 LRAHYACSVYAAPLMVK-------AGKGLIVIIS-STGGLEYLFNVAYGVGKAAIDRMAA 172

Query: 183 NLALEWGADYDIRVNGIAPG 202
           ++A E    + + V  + PG
Sbjct: 173 DMAHEL-KPHGVAVVSLWPG 191

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 77/271 (28%), Positives = 116/271 (42%), Gaps = 41/271 (15%)

Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAV 66
            L GK  L+ G      I +  +  F   GA +A+      + D A   +  L   + A 
Sbjct: 7   PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAV----TYLNDKARPYVEPLAEELDAP 62

Query: 67  GFEG-DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL-------SPNGFRTV 118
            F   DVR     + V     E +G+LD L+++ A       EDL       S  GF   
Sbjct: 63  IFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIA---FAPKEDLHGRVVDCSREGFALA 119

Query: 119 MDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----YQIHVAAA 173
           MD+ S  +F  M   A   +  GG         S+L +S   +Y A      Y + +   
Sbjct: 120 MDV-SCHSFIRMARLAEPLMTNGG---------SLLTMS---YYGAEKVVENYNL-MGPV 165

Query: 174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLG 232
           KAA+++  R LA E G    IRV+ I+PGP+  T   + +   D +   A +  PL +L 
Sbjct: 166 KAALESSVRYLAAELG-PKGIRVHAISPGPL-KTRAASGIDDFDALLEDAAERAPLRRLV 223

Query: 233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +  D+   A +L SD  + + G TL +DGG 
Sbjct: 224 DIDDVGAVAAFLASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 70.3 bits (173), Expect = 3e-14
 Identities = 46/205 (22%), Positives = 79/205 (38%), Gaps = 16/205 (7%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ 75
           + LITGGGSGIG  ++ +F K GA V I+   ++  +   + +R  G K   ++ DV ++
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 76  EHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
           E   +  +   +  G + IL+N A    G  L    +L         +++          
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVVSGKKL---LELPDEEIEKTFEVN-------TLA 110

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE--WGA 190
                K   P       G I+ I++     +        A+KAA      +L LE     
Sbjct: 111 HFWTTKAFLPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYG 170

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAP 215
              I+   + P  I +T     +  
Sbjct: 171 KPGIKTTLVCPYFI-NTGMFQGVKT 194

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 65/254 (25%), Positives = 101/254 (39%), Gaps = 26/254 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +  +  L+TG   GIG  +S +    G  V  + R     D     L         F  D
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI--DDFPGEL---------FACD 49

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   E     +    E    +D +VN            +     + V D++      +  
Sbjct: 50  LADIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQ 108

Query: 132 EALKYLKKGGPGRSSAGGGSILNI-SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             L+ +K    GR       I+NI S  +       +   +AAK+A+   TR  ALE  A
Sbjct: 109 AFLEGMKLREQGR-------IVNICSRAIFGALD--RTSYSAAKSALVGCTRTWALEL-A 158

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAP--DEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           +Y I VN +APGPI +T    +  P   E   +    +P+ +LG   ++A A  +L SD 
Sbjct: 159 EYGITVNAVAPGPI-ETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDD 217

Query: 249 GKYVNGTTLIVDGG 262
             ++ G  L VDGG
Sbjct: 218 AGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 19/204 (9%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
            LITG  SGIG  ++ +F K G +VA+  RR   LD   + L +          DV  +E
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 77  HAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALK 135
             + V+       G LD+++ NA  G    S  DLS   FR  +D + +G   +   AL 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVG-KGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 136 YLKKGGPGRSSAGGGSILNISATLHY----TASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +         G G ++ IS+         A+ Y    +A+KAA+ ++  +L  +    
Sbjct: 120 QFRA-------KGRGHLVLISSVAALRGLPGAAAY----SASKAALSSLAESLRYDV-KK 167

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAP 215
             IRV  I PG I DTP    +  
Sbjct: 168 RGIRVTVINPGFI-DTPLTANMFT 190

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 70.1 bits (172), Expect = 4e-14
 Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             G   LITGG SGIG  ++ +F + G +V I GR ++ L  A +    +         D
Sbjct: 3   TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEI----HTEVCD 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLS--PNGFRTV---MDIDSVGT 126
           V  ++  +++VE   + +  L++L+N A    +   EDL+   +        +  + +  
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAG---IQRNEDLTGAEDLLDDAEQEIATNLLAP 115

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-SWYQIHVAAAKAAVDAITRNLA 185
             +    L +L +    +  A   +I+N+S+ L +   +   ++  A KAA+ + T  LA
Sbjct: 116 IRLTALLLPHLLR----QPEA---TIINVSSGLAFVPMASTPVY-CATKAAIHSYT--LA 165

Query: 186 LEWGA-DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL 228
           L     D  + V  +AP P+ DT         E N++AR  MPL
Sbjct: 166 LREQLKDTSVEVIELAP-PLVDTT--------EGNTQARGKMPL 200

Length = 245

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.1 bits (172), Expect = 5e-14
 Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 26/264 (9%)

Query: 12  LKGKVALITGG--GSGIGFEISTQFGKHGASV---------AIMGRRKQVLDAAV--SAL 58
           L  K+AL+TG    +GIG  +  +    G  +           M       +  +    +
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 59  RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
            S G++    E D+ +     +V  +  E  G   IL+N AA +     E+L+       
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKH 122

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
             ++   T  +      + K+         GG I+N+++         ++  AA K A++
Sbjct: 123 YAVNVRATMLLSSA---FAKQYDGKA----GGRIINLTSGQSLGPMPDELAYAATKGAIE 175

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
           A T++LA E  A+  I VN + PGP  DT  +     +E+        P  ++GE  D A
Sbjct: 176 AFTKSLAPEL-AEKGITVNAVNPGPT-DTGWIT----EELKHHLVPKFPQGRVGEPVDAA 229

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
               +L S+  K++ G  +  +GG
Sbjct: 230 RLIAFLVSEEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 69.3 bits (169), Expect = 8e-14
 Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 11/250 (4%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASV-AIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           ++A +TGG  GIG  I  +  K G  V A  G         +   ++LG   +  EG+V 
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVG 63

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             +  K   +      G++D+LVN A     V    ++   +  V+D +    F +  + 
Sbjct: 64  DWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQV 123

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           +        G    G G I+NIS+       + Q + + AKA +   T +LA E  A   
Sbjct: 124 ID-------GMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV-ATKG 175

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN 253
           + VN ++PG IG T  +  + PD +  K    +P+ +LG   +I     +L S+   +  
Sbjct: 176 VTVNTVSPGYIG-TDMVKAIRPDVLE-KIVATIPVRRLGSPDEIGSIVAWLASEESGFST 233

Query: 254 GTTLIVDGGL 263
           G    ++GGL
Sbjct: 234 GADFSLNGGL 243

Length = 246

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 69.2 bits (169), Expect = 9e-14
 Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 29/229 (12%)

Query: 10  DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAV 66
             L  K  L+TG   G+G +++  +   GA+V ++ R ++ L+    A+   G     A+
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 67  GFE----GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD-- 120
            F+     +   ++ A  + E+T    GKLD +V+ A   +      LSP  F+TV +  
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEAT---QGKLDGIVHCAGYFYA-----LSPLDFQTVAEWV 113

Query: 121 ----IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAA 176
               I++V    +       LK+       +   S++ +  +   T   Y     A+KAA
Sbjct: 114 NQYRINTVAPMGLTRALFPLLKQ-------SPDASVIFVGESHGETPKAYWGGFGASKAA 166

Query: 177 VDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY 225
           ++ + +  A EW    ++R N + PGPI ++P   K  P E  S+ + Y
Sbjct: 167 LNYLCKVAADEWERFGNLRANVLVPGPI-NSPQRIKSHPGEAKSERKSY 214

Length = 239

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GKVA+ITG  SG G   +      G  + +   ++  LD AV+ LR+ G + +G   D
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA---AGNFL 104
           V      + + ++  E FG + +L N A   AG  +
Sbjct: 64  VSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLV 99

Length = 287

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 37/266 (13%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVR 73
           + AL+TG    IG  I+     HG  VA+   R +   +A  + +R+LG +AV  + D+ 
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA 69

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
            +   + +V       G + +LVN A+     SA   +   +   M  +    F +    
Sbjct: 70  DEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAF 129

Query: 134 LKYLKKGGPGRSSAGGGSILNI------SAT---LHYTASWYQIHVAAAKAAVDAITRNL 184
            + L            G ++N+      +     L YT S         KAA+   TR L
Sbjct: 130 ARALPADAR-------GLVVNMIDQRVWNLNPDFLSYTLS---------KAALWTATRTL 173

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A        IRVN I PGP   T    + +P++  ++     PL +     +IA A  YL
Sbjct: 174 AQALAP--RIRVNAIGPGP---TLPSGRQSPEDF-ARQHAATPLGRGSTPEEIAAAVRYL 227

Query: 245 TSDTGKYVNGTTLIVDGG---LWLSR 267
                  V G  + VDGG    WL+ 
Sbjct: 228 LDAPS--VTGQMIAVDGGQHLAWLTP 251

Length = 258

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 2e-13
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 29/222 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK  L+TG  SGIG   + QF + GA+V  + RR+ +LDA    +   G  A+    D
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   +    +V    +  G +DIL+N A  +      + S + +    D++     TM  
Sbjct: 98  LSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAE-SLDRWH---DVER----TM-- 147

Query: 132 EALKY-----LKKG-GPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNL 184
             L Y     L +G  PG    G G I+N++     + +     V  A+KAA+ A++R +
Sbjct: 148 -VLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVI 206

Query: 185 ALEWGADYDIRVNGIAPGPIGDTP---------GMNKLAPDE 217
             EWG D  +    +   P+  TP         G+  L  DE
Sbjct: 207 ETEWG-DRGVHSTTLY-YPLVATPMIAPTKAYDGLPALTADE 246

Length = 293

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 66.5 bits (163), Expect = 4e-13
 Identities = 50/244 (20%), Positives = 84/244 (34%), Gaps = 46/244 (18%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
            ++ G    IG  ++     HG  V   GR                  +  ++ D+  + 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGR-----------------SSGDYQVDITDEA 43

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             K +    FE  G  D +V+ A         +L+   F+  ++   +G   +    L Y
Sbjct: 44  SIKAL----FEKVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPY 99

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
           L           GGSI   S  L           A    A++   R  A+E      IR+
Sbjct: 100 LND---------GGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPR--GIRI 148

Query: 197 NGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTT 256
           N ++PG + ++                D+ P ++     D+A A  Y+ S  G +  G  
Sbjct: 149 NAVSPGVVEESLEAYG-----------DFFPGFEPVPAEDVAKA--YVRSVEGAF-TGQV 194

Query: 257 LIVD 260
           L VD
Sbjct: 195 LHVD 198

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 74/277 (26%), Positives = 112/277 (40%), Gaps = 54/277 (19%)

Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIM------GRRKQVLDAAVSALRSLGI 63
           L GK AL+TG      I + I+ Q    GA + I       GR ++ +      L     
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP--- 60

Query: 64  KAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGF 115
            ++    DV+     ++  E+  + +GKLDILV+  A        G+F       S  GF
Sbjct: 61  -SLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDF----SATSREGF 115

Query: 116 RTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH----VA 171
              ++I +     +C  A   + +         GGSI+    TL Y      I     + 
Sbjct: 116 ARALEISAYSLAPLCKAAKPLMSE---------GGSIV----TLTYLGGVRAIPNYNVMG 162

Query: 172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS------KARDY 225
            AKAA++A  R LA E G   +IRVN I+ GPI        LA   +           + 
Sbjct: 163 VAKAALEASVRYLAAELGPK-NIRVNAISAGPI------RTLASSAVGGILDMIHHVEEK 215

Query: 226 MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            PL +   + ++   A +L SD    + G T+ VD G
Sbjct: 216 APLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252

Length = 258

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 67.6 bits (165), Expect = 4e-13
 Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 25/264 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-EG 70
           L GK+A  T    GIGF ++    + GA V ++ R ++ L  A   ++S     V +   
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+ ++E  ++ V+   ++ G+ DI        F  S     P  F  +   D  G   + 
Sbjct: 66  DLTKREDLERTVKE-LKNIGEPDI--------FFFSTGGPKPGYFMEMSMEDWEGAVKLL 116

Query: 131 HEALKYLKKG-GPGRSSAGGGSILNISATLHYTASWYQIHVA-AAKAAVDAITRNLALEW 188
                YL +   P     G G I+  S ++        I ++   + ++  + R LA E 
Sbjct: 117 LYPAVYLTRALVPAMERKGFGRII-YSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKEL 175

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDE-------INSKARDY---MPLYKLGEKWDIA 238
           G    I VNGI PG I  T  + +LA D        +    ++Y   +PL +LGE  +I 
Sbjct: 176 GP-KGITVNGIMPGII-RTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIG 233

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
               +L SD G Y+NG  + VDGG
Sbjct: 234 YLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 8e-13
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 21/187 (11%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
             KVAL+TG  SGIG   + +  + G  V    R      A  + +   G++ +  E DV
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP----ARAAPIP--GVELL--ELDV 54

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
                 +  V+      G++D+LVN A      +AE+ S    + + D +  G   M   
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRA 114

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY 192
            L +++  G GR       I+NIS+ L +  + Y    AA+K AV+  + +L      D+
Sbjct: 115 VLPHMRAQGSGR-------IINISSVLGFLPAPYMALYAASKHAVEGYSESL------DH 161

Query: 193 DIRVNGI 199
           ++R  GI
Sbjct: 162 EVRQFGI 168

Length = 270

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 82/272 (30%), Positives = 112/272 (41%), Gaps = 43/272 (15%)

Query: 10  DILKGKVALITG--GGSGIGFEISTQFGKHGASVAI------MGRRKQVLDAAVSALRSL 61
            +++GK  LI G      I + I+ Q    GA +A       +G+R + L        SL
Sbjct: 3   GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAE------SL 56

Query: 62  GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE------DLSPNGF 115
           G   V    DV        V E+  + +GKLD +V+A    F    E      D +   F
Sbjct: 57  GSDFV-LPCDVEDIASVDAVFEALEKKWGKLDFVVHAIG--FSDKNELKGRYADTTRENF 113

Query: 116 RTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-----YQIHV 170
              M I S  +FT   E  K   K  P      GGS+L    TL Y  S      Y + +
Sbjct: 114 SRTMVI-SCFSFT---EIAKRAAKLMPD-----GGSML----TLTYGGSTRVMPNYNV-M 159

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK 230
             AKAA++A  R LA ++G    IRVN I+ GP+    G        I S  +   PL +
Sbjct: 160 GVAKAALEASVRYLAADYGPQ-GIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRR 218

Query: 231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
                ++  +ALYL SD    V G    VD G
Sbjct: 219 TVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG 250

Length = 271

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 20/194 (10%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV--RR 74
            LITG   GIG E+  Q    G +  I   R       ++AL +   +    E DV    
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVS---AEDLSPNGFRTVMDIDSVGTFTMCH 131
            E A+ V E        LD+L+N A    L S   A ++       V  ++ +G   +  
Sbjct: 61  AESAEAVAERL--GDAGLDVLINNAG--ILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 132 EALKYLKKGGPGR---SSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
             L  L KG   +    S+  GSI       + +  WY     A+KAA++ +T++LA+E 
Sbjct: 117 AFLPLLLKGARAKIINISSRVGSI-----GDNTSGGWYSYR--ASKAALNMLTKSLAVEL 169

Query: 189 GADYDIRVNGIAPG 202
             D  I V  + PG
Sbjct: 170 KRD-GITVVSLHPG 182

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 7e-12
 Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 9/202 (4%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
           AL+ G  SGIG   + +    G  VA+  RR +  +  V  +R+ G +AV F  DV   +
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             K  V    E  G++++LV+ A   +     ++S   F + + I  VG   +    L  
Sbjct: 73  SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVL-- 130

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
                PG      G ++ + + +      +     AAKA ++A+  NL +E      +R 
Sbjct: 131 -----PGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGT-GVRA 184

Query: 197 NGIAPGPIGDTPGMNKLAPDEI 218
           + + PGP     G + L  + I
Sbjct: 185 SIVHPGPTLTGMGWS-LPAEVI 205

Length = 274

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 64.0 bits (156), Expect = 8e-12
 Identities = 80/280 (28%), Positives = 120/280 (42%), Gaps = 61/280 (21%)

Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAI------MGRRKQVLDAAVSALRSLG 62
           ++ GK  LI G      I + I+      GA +A       + +R + L A + A     
Sbjct: 7   LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAF---- 62

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNG 114
              V    DV  +     V E+  + +GKLD +V+A          G ++    D S + 
Sbjct: 63  ---VAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYV----DTSRDN 115

Query: 115 FRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH---V 170
           F   MDI SV +FT +   A K +  GG         SIL ++   +Y A     H   +
Sbjct: 116 FTMTMDI-SVYSFTAVAQRAEKLMTDGG---------SILTLT---YYGAEKVMPHYNVM 162

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI--------GDTPGMNKLAPDEINSKA 222
             AKAA++A  + LA++ G   +IRVN I+ GPI        GD   + K   +E N+  
Sbjct: 163 GVAKAALEASVKYLAVDLGPK-NIRVNAISAGPIKTLAASGIGDFRYILKW--NEYNA-- 217

Query: 223 RDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
               PL +     ++  +ALYL SD  + V G    VD G
Sbjct: 218 ----PLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG 253

Length = 272

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 62.5 bits (152), Expect = 2e-11
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 30/208 (14%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL--RSLGIKAVGFEGDV 72
           K   ITG  SGIG E +  F ++G  V +    +  L A  + L   ++   A+    DV
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGAL----DV 56

Query: 73  RRQEH-AKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
             +   A  + +      G+LD L N A     G F    ED+       ++DI+  G  
Sbjct: 57  TDRAAWAAALADFAAATGGRLDALFNNAGVGRGGPF----EDVPLAAHDRMVDINVKGVL 112

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA---AAKAAVDAITRNL 184
              + AL YLK          G  ++N +++   +A + Q  +A   A K AV  +T  L
Sbjct: 113 NGAYAALPYLKA-------TPGARVINTASS---SAIYGQPDLAVYSATKFAVRGLTEAL 162

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNK 212
            +EW A + IRV  + P  + DTP + K
Sbjct: 163 DVEW-ARHGIRVADVWPWFV-DTPILTK 188

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 74/280 (26%), Positives = 111/280 (39%), Gaps = 52/280 (18%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +V ++ G G GIG  I+ + G  G  V +    ++ L+AA   LR  G      E DV  
Sbjct: 3   EVVVVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           +E  K +   T +  G +  LV+ A     VS    SP     ++ +D  GT  +  E  
Sbjct: 61  RESVKALAA-TAQTLGPVTGLVHTAG----VSPSQASP---EAILKVDLYGTALVLEEFG 112

Query: 135 KYLKKGGPGR--SSAGGGSILNISA-----------------------TLHYTASWYQIH 169
           K +  GG G   +S  G  +  ++A                        +  +   YQI 
Sbjct: 113 KVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI- 171

Query: 170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM--- 226
              AK A        A++WG     R+N I+PG I        LA DE+N    D     
Sbjct: 172 ---AKRANALRVMAEAVKWGER-GARINSISPGII-----STPLAQDELNGPRGDGYRNM 222

Query: 227 ----PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
               P  + G   +IA  A +L    G ++ G+  +VDGG
Sbjct: 223 FAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262

Length = 275

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 62/276 (22%), Positives = 94/276 (34%), Gaps = 63/276 (22%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           +ITG  SGIG   +      G +V  +  R+                      D+   E 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE-----------------ADVIADLSTPEG 45

Query: 78  AKKVVESTFEHFGK-LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
               +          LD LVN A       A          V+ ++  G   +    L  
Sbjct: 46  RAAAIADVLARCSGVLDGLVNCAGVGGTTVAGL--------VLKVNYFGLRALMEALLPR 97

Query: 137 LKKGGPGRSSAGGGSILNIS--ATLHYTASWYQIH---------VAAA------------ 173
           L+KG        G + + +S  A   +     ++           A A            
Sbjct: 98  LRKG-------HGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLA 150

Query: 174 ----KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM--P 227
               K A+   TR  A  W     +RVN +APGP+ +TP +     D    ++ D    P
Sbjct: 151 YAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPV-ETPILQAFLQDPRGGESVDAFVTP 209

Query: 228 LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           + +  E  +IA    +L SD   ++NG  L VDGGL
Sbjct: 210 MGRRAEPDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 61.9 bits (150), Expect = 4e-11
 Identities = 41/134 (30%), Positives = 64/134 (47%)

Query: 10  DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           D   G+ A+ITGG SGIG    T+F + GA V +    K  L  AV+ LR+ G    G  
Sbjct: 2   DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVM 61

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DVR +E    + +  F   G +D++ + A         +++ + +R V+D+D  G+   
Sbjct: 62  CDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHT 121

Query: 130 CHEALKYLKKGGPG 143
               L  L + G G
Sbjct: 122 VEAFLPRLLEQGTG 135

Length = 275

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 5e-11
 Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 30/216 (13%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
             ALITG   GIG  I+ +      ++ + GR  + LD   + L      A  F  D+  
Sbjct: 4   PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPG----ATPFPVDLTD 58

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
            E     + +  E  G+LD+LV+ A    L    + + + +R  ++++ V    +    L
Sbjct: 59  PE----AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLL 114

Query: 135 KYLKKGGPGRSSAGGGSIL-NISATLHYTASW--YQIHVAAAKAAVDAITRNLALEWGAD 191
                  P   +A G  +  N  A L     W  Y    AA+K A+ A+   L  E    
Sbjct: 115 -------PALRAAHGHVVFINSGAGLRANPGWGSY----AASKFALRALADALREEEPG- 162

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP 227
            ++RV  + PG   DT     L   E      +Y P
Sbjct: 163 -NVRVTSVHPGRT-DTDMQRGLVAQE----GGEYDP 192

Length = 227

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 61.7 bits (150), Expect = 7e-11
 Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 20/192 (10%)

Query: 79  KKVVESTFEHFGKLDILVNAAAGNFLVSAEDL--SPNGFRTVMDIDSVGTFTMCHEALKY 136
           ++V ES    FG +DILV++ A    V+   L  S  G+   +   S    ++       
Sbjct: 108 QEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSL------- 160

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHVAAAKAAVDAITRNLALEWGAD 191
           L+  GP   + GG SI     +L Y AS      Y   +++AKAA+++ TR LA E G  
Sbjct: 161 LQHFGP-IMNPGGASI-----SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 214

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           Y IRVN I+ GP+G          D++   +    PL K     ++  AA +L S     
Sbjct: 215 YKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASA 274

Query: 252 VNGTTLIVDGGL 263
           + G T+ VD GL
Sbjct: 275 ITGATIYVDNGL 286

Length = 303

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 8e-11
 Identities = 53/219 (24%), Positives = 82/219 (37%), Gaps = 28/219 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKV  ITGG  GIG   +      GA VAI G   +    A      LG+  VG   D
Sbjct: 3   LRGKVVAITGGARGIGLATARALAALGARVAI-GDLDE--ALAKETAAELGL-VVGGPLD 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           V         +++     G +D+LVN A     G FL   + ++    R ++D++  G  
Sbjct: 59  VTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVT----RRILDVNVYGVI 114

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
                A        P     G G ++N+++              A+K AV   T    LE
Sbjct: 115 LGSKLAA-------PRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLE 167

Query: 188 WGADYDIRVNGIAPG--------PIGDTPGMNKLAPDEI 218
                 + V+ + P           G   G   + P+++
Sbjct: 168 L-RGTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDV 205

Length = 273

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 27/250 (10%)

Query: 16  VALITGGGSGIGFEISTQF-GKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           V ++TG   GIG  ++ +   +   S V ++ R ++ L      LR  G++    + D+ 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP-GLRVTTVKADLS 59

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDIDSVGTFTMCHE 132
                ++++E+  +  G+ D+L+N A     VS  E +  +  +   D++     T    
Sbjct: 60  DAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLN----LTSPVC 115

Query: 133 ALKYLKKGGPGRSSAGGGSILNIS--ATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
               L +    R      +++N+S  A ++    W      ++KAA D   R LA E   
Sbjct: 116 LTSTLLRAFKKRGLK--KTVVNVSSGAAVNPFKGW--GLYCSSKAARDMFFRVLAAE--- 168

Query: 191 DYDIRVNGIAPGPIGDTP----GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           + D+RV   APG + DT          A  E  S+ R    L + GE  D   +A  L +
Sbjct: 169 EPDVRVLSYAPGVV-DTDMQREIRETSADPETRSRFRS---LKEKGELLDPEQSAEKLAN 224

Query: 247 --DTGKYVNG 254
             +  K+ +G
Sbjct: 225 LLEKDKFESG 234

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 15/193 (7%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           GK+ ++TG GSGIG E +  F + GA V      +   +     +R+ G  A  +  DV 
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
             +  +   E      G  DI+VN A    AG FL    D S   +  V+D++  G    
Sbjct: 375 DADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFL----DTSAEDWDRVLDVNLWGVIHG 430

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
           C    + + + G       GG I+N+++   Y  S      A +KAAV  ++  L  E  
Sbjct: 431 CRLFGRQMVERGT------GGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL- 483

Query: 190 ADYDIRVNGIAPG 202
           A   I V  I PG
Sbjct: 484 AAAGIGVTAICPG 496

Length = 582

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 22/194 (11%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVAL+TG  SGIG   + +    G +V    RR       +  L SLG+  +    DV  
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVD----KMEDLASLGVHPLSL--DVTD 57

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           +   K  V++     G++D+LVN A      + ED+  +  R   +++  G   +    L
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117

Query: 135 KYLKKGGPGRSSAGGGSILNISAT----LHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            +++    GR       I+NIS+          +WY     A K A++  +  L LE  A
Sbjct: 118 PHMRAQRSGR-------IINISSMGGKIYTPLGAWYH----ATKFALEGFSDALRLEV-A 165

Query: 191 DYDIRVNGIAPGPI 204
            + I V  I PG I
Sbjct: 166 PFGIDVVVIEPGGI 179

Length = 273

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 59/218 (27%), Positives = 85/218 (38%), Gaps = 35/218 (16%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KGKV L+TG   GIG     Q    GA+      R         ++  LG + V  + D
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD------PESVTDLGPRVVPLQLD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA--EDLSPNGFRTVMDIDSVGTFTM 129
           V         V +  E    + ILVN  AG F   +   +   +  R  M+ +  G   M
Sbjct: 58  VTDPAS----VAAAAEAASDVTILVN-NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV----AAAKAAVDAITRNLA 185
                  L          GGG+I+N+        SW         +A+KAA  ++T+ L 
Sbjct: 113 ARAFAPVLAA-------NGGGAIVNV----LSVLSWVNFPNLGTYSASKAAAWSLTQALR 161

Query: 186 LEWGADYDIRVNGIAPGPIGDTP-----GMNKLAPDEI 218
            E  A    RV G+ PGPI DT         K +P ++
Sbjct: 162 AEL-APQGTRVLGVHPGPI-DTDMAAGLDAPKASPADV 197

Length = 238

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 56/241 (23%), Positives = 91/241 (37%), Gaps = 45/241 (18%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGAS----VAIM---GRRKQVLDAAVSAL-RSLGIKAV 66
            V LITG  SGIG  ++ +     +      A M    ++ ++ +AA +    +L     
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETL-- 58

Query: 67  GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGT 126
             + DV   +     VE   E    +D+LV  A    L   E LS +   +V D++  GT
Sbjct: 59  --QLDVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGT 114

Query: 127 FTMCHEALKYLKKGGPGR----SSAGG--GSILNISATLHYTASWYQIHVAAAKAAVDAI 180
             M    L  +K+ G GR    SS GG  G   N      Y AS         K A++ +
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDV----YCAS---------KFALEGL 161

Query: 181 TRNLALEWGADYDIRVNGIAPGPI---------GDTPGMNKLA--PDEINSKARDYMPLY 229
             +LA++    +++ ++ I  GP+         G    +                Y+   
Sbjct: 162 CESLAVQL-LPFNVHLSLIECGPVHTAFMEKVLGSPEEVLDRTADDITTFHFFYQYLAHS 220

Query: 230 K 230
           K
Sbjct: 221 K 221

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEG 70
           L GK AL+TG   GIG + +      GA V +  R+K    +  V+ + + G +A     
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILV-NAAAG 101
           D+  +E    ++++  E FG LD LV NA+ G
Sbjct: 64  DLTDEESVAALMDTAREEFGGLDALVLNASGG 95

Length = 248

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 58.2 bits (141), Expect = 6e-10
 Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 20/197 (10%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ 75
           + L+TG  +G G  I+ +F + G  V   GRR++ L         LG      + DVR +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGDNLYIAQLDVRNR 58

Query: 76  EHAKKVVESTFEHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
              ++++ S    +  +D+LVN A     L  A   S   + T++D ++ G   M    L
Sbjct: 59  AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALEWGADY- 192
                  PG      G I+NI +T     SW Y         A  A  R  +L    D  
Sbjct: 119 -------PGMVERNHGHIINIGST---AGSWPYA--GGNVYGATKAFVRQFSLNLRTDLH 166

Query: 193 --DIRVNGIAPGPIGDT 207
              +RV  I PG +G T
Sbjct: 167 GTAVRVTDIEPGLVGGT 183

Length = 248

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 21/195 (10%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
            KV  ITG   G G   +    + G  V    R    L          G + +    DV 
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAE---KYGDRLLPLALDVT 59

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMCHE 132
            +      VE+  EHFG+LDI+VN  AG  L    E+++ +  R  +D +  G   +   
Sbjct: 60  DRAAVFAAVETAVEHFGRLDIVVN-NAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQA 118

Query: 133 ALKYLKKGGPGR----SSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
            L YL++   G     SS GG S   +S   H           A+K A++ ++  LA E 
Sbjct: 119 VLPYLREQRSGHIIQISSIGGISAFPMSGIYH-----------ASKWALEGMSEALAQE- 166

Query: 189 GADYDIRVNGIAPGP 203
            A++ I+V  + PG 
Sbjct: 167 VAEFGIKVTLVEPGG 181

Length = 275

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 54/293 (18%)

Query: 12  LKGKVALITGGG--SGIGFEISTQFGKHGASV------AIMGRRKQVLDAA-VSALRSLG 62
           L GK+A I G G   G G+ I+    + GA++       I     Q L+     A R L 
Sbjct: 6   LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLS 65

Query: 63  ------IKAV-----GFEG------DVRRQEHAK--------KVVESTFEHFGKLDILVN 97
                    +      F+       ++R  +  K        +V E   + FG +DILV+
Sbjct: 66  NGSLLTFAKIYPMDASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVH 125

Query: 98  AAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI 155
           + A +  +S    + S  G+   +   S    ++       L   GP   + GG +I   
Sbjct: 126 SLANSPEISKPLLETSRKGYLAALSTSSYSFVSL-------LSHFGP-IMNPGGSTI--- 174

Query: 156 SATLHYTASW-----YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM 210
             +L Y AS      Y   +++AKAA+++ T+ LA E G  + IRVN I+ GP+    G 
Sbjct: 175 --SLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK 232

Query: 211 NKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
                + +    +D+ PL +  E   +  AA +L S     + G TL VD G 
Sbjct: 233 AIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA 285

Length = 299

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 65/257 (25%), Positives = 98/257 (38%), Gaps = 32/257 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GK  L+ GG  GIG  I  +F   GA+V       +  DAA    +  G  AV  +  
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK--DAAERLAQETGATAVQTDSA 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
            R        V       G LDILV  A       A +L  +    +  I+    +    
Sbjct: 62  DRDA------VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASV 115

Query: 132 EALKYLKKGGPGRSSAGGGSILNISAT------LHYTASWYQIHVAAAKAAVDAITRNLA 185
           EA          R    GG I+ I +       +   A++     AA+K+A+  + R LA
Sbjct: 116 EA---------ARQMPEGGRIIIIGSVNGDRMPVAGMAAY-----AASKSALQGMARGLA 161

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            ++G    I +N + PGPI DT   N  A   +      +M + + G   ++A    +L 
Sbjct: 162 RDFGPR-GITINVVQPGPI-DT-DANP-ANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLA 217

Query: 246 SDTGKYVNGTTLIVDGG 262
                +V G    +DG 
Sbjct: 218 GPEASFVTGAMHTIDGA 234

Length = 237

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 33/202 (16%)

Query: 19  ITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHA 78
           ITG  SGIG  ++ ++ + GA++ ++ RR   L A  + L     +   +  DVR  +  
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLP-KAARVSVYAADVRDADAL 65

Query: 79  KKVVESTFEHFGKLDILVNAAAGNFLVS-------AEDLSPNGFRTVMDIDSVGTFTMCH 131
                      G  D+++ A AG   +S        EDL+   FR VMD +  G      
Sbjct: 66  AAAAADFIAAHGLPDVVI-ANAG---ISVGTLTEEREDLA--VFREVMDTNYFGMVATFQ 119

Query: 132 EALKYLKKGGPGR-----SSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
             +  ++    G      S AG   +  +     Y+AS         KAA      +L +
Sbjct: 120 PFIAPMRAARRGTLVGIASVAG---VRGLPGAGAYSAS---------KAAAIKYLESLRV 167

Query: 187 EWGADYDIRVNGIAPGPIGDTP 208
           E      +RV  IAPG I  TP
Sbjct: 168 EL-RPAGVRVVTIAPGYI-RTP 187

Length = 257

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 54.9 bits (133), Expect = 7e-09
 Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 39/191 (20%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIK----AVGF 68
           G  A++TG   GIG   + +  K G +V ++ R ++ LDA    +    G++    A  F
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDI--LVNAA------AGNFLVSAEDLSPNGFRTVMD 120
                  E  +K +E        LDI  LVN           FL    +   +  + +++
Sbjct: 61  SAGDDIYERIEKELEG-------LDIGILVNNVGISHSIPEYFL----ETPEDELQDIIN 109

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI----HVAAAKAA 176
           ++ + T  M    L  + K          G+I+NIS+     A           +A+KA 
Sbjct: 110 VNVMATLKMTRLILPGMVKR-------KKGAIVNISS----FAGLIPTPLLATYSASKAF 158

Query: 177 VDAITRNLALE 187
           +D  +R L  E
Sbjct: 159 LDFFSRALYEE 169

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 52/215 (24%), Positives = 81/215 (37%), Gaps = 25/215 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +K K  L+TG   GIG         HGA       R     +A   +   G K V    D
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDP--GSAAHLVAKYGDKVVPLRLD 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGN---FLVSAEDLSPNGFRTVMDIDSVGTFT 128
           V   E  K       +    +D+++N A       L+    L     +  MD++  G   
Sbjct: 59  VTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALE--ALKQEMDVNVFGLLR 112

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +       LK         GGG+I+N+++             +A+K+A  ++T+ L  E 
Sbjct: 113 LAQAFAPVLKA-------NGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAEL 165

Query: 189 GADYDIRVNGIAPGPIGDTP-----GMNKLAPDEI 218
            A     V  + PGPI DT      G  K +P+ +
Sbjct: 166 -AAQGTLVLSVHPGPI-DTRMAAGAGGPKESPETV 198

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 32/220 (14%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K  L+TG   GIG  ++      GA + ++GR  + L+ A++A      +      D
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARLPYPGRHRWVVAD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +  +   + V+       G +++L+N A  N     ED  P     ++ ++      +  
Sbjct: 62  LTSEAGREAVLARA-REMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTR 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLH------YTASWYQIHVAAAKAAV----DAIT 181
             L  L+             ++N+ +T        Y +  Y     A+K A+    +A+ 
Sbjct: 121 ALLPLLRA-------QPSAMVVNVGSTFGSIGYPGYAS--Y----CASKFALRGFSEALR 167

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK 221
           R L     AD  +RV  +AP     T  MN  A   +N  
Sbjct: 168 REL-----ADTGVRVLYLAPRAT-RT-AMNSEAVQALNRA 200

Length = 263

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 54/202 (26%), Positives = 83/202 (41%), Gaps = 16/202 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G V +ITG  SGIG   +  F + GA + +  R ++ L A     R+LG + +    D
Sbjct: 5   LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVN----AAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           V   +  K +        G++D+ VN     A G F    E+        V+  + +G  
Sbjct: 65  VTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRF----EETPIEAHEQVIQTNLIGYM 120

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
              H AL   KK        G G  +N+ +   + A  Y    +A+K  +   +  L  E
Sbjct: 121 RDAHAALPIFKK-------QGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGE 173

Query: 188 WGADYDIRVNGIAPGPIGDTPG 209
                DI V  + P  + DTPG
Sbjct: 174 LADHPDIHVCDVYPAFM-DTPG 194

Length = 330

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 21/195 (10%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEGDV 72
            K  LITG  SG G  ++      G  V    R     +AA +   +L   +A+    DV
Sbjct: 4   MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS----EAARADFEALHPDRALARLLDV 59

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
              +    VV      FG +D+LVN A      + E+      R   +++  G   M   
Sbjct: 60  TDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKA 119

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYTA----SWYQIHVAAAKAAVDAITRNLALEW 188
            L  ++     R     G I+NI++           +Y      +K A++ I+ +LA E 
Sbjct: 120 VLPGMRA----RRR---GHIVNITSMGGLITMPGIGYY----CGSKFALEGISESLAKEV 168

Query: 189 GADYDIRVNGIAPGP 203
            A + I V  + PG 
Sbjct: 169 -APFGIHVTAVEPGS 182

Length = 277

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 46/209 (22%), Positives = 72/209 (34%), Gaps = 55/209 (26%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
            L+TGG  GIG  I+      G+                                     
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGS------------------------------------- 23

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             K +V S      + D++V+ AA        DL+ +     +  + VGT  +   A + 
Sbjct: 24  -PKVLVVS------RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAREL 76

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
           +K    GR        + IS+      +      AA+KAA+D + +  A E G    +  
Sbjct: 77  MKAKRLGR-------FILISSVAGLFGAPGLGGYAASKAALDGLAQQWASE-GWGNGLPA 128

Query: 197 NGIAPGPIGDTPGMNK--LAPDEINSKAR 223
             +A G      GM K  +AP+EI    R
Sbjct: 129 TAVACGTWA-GSGMAKGPVAPEEILGNRR 156

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 52.4 bits (126), Expect = 7e-08
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 12/142 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG- 70
           L GK A++TGG SG+G E +    + GA V +  RR    D A  AL   GI  V     
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR---PDVAREALA--GIDGVEVVML 78

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+   E  +   E   +   ++DIL+N A    +   E    +G+      + +G F + 
Sbjct: 79  DLADLESVRAFAERFLDSGRRIDILINNAG--VMACPETRVGDGWEAQFATNHLGHFALV 136

Query: 131 HEALKYLKKGGPGR----SSAG 148
           +     L  G   R    SSAG
Sbjct: 137 NLLWPALAAGAGARVVALSSAG 158

Length = 315

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.1 bits (125), Expect = 7e-08
 Identities = 76/271 (28%), Positives = 104/271 (38%), Gaps = 44/271 (16%)

Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           L GK  LITG      I + I+    + GA +A      +  D         G   V F 
Sbjct: 4   LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLV-FP 62

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVN--------AAAGNFLVSAEDLSPNGFRTVMDI 121
            DV   E    +  S  +H+  LD LV+        A AG+FL   + LS   FR   DI
Sbjct: 63  CDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFL---DGLSRENFRIAHDI 119

Query: 122 DSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI----HVAAAKAAV 177
            +     +   AL  L             S+L    TL Y  +   +     +  AKA++
Sbjct: 120 SAYSFPALAKAALPMLSDDA---------SLL----TLSYLGAERVVPNYNTMGLAKASL 166

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEIN--SKARDYM----PLYKL 231
           +A  R LA+  G    IR NGI+ GPI        LA   I    K  D++    PL + 
Sbjct: 167 EASVRYLAVSLGPK-GIRANGISAGPI------KTLAASGIKDFGKILDFVESNAPLRRN 219

Query: 232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
               ++   A +L SD    V G    VD G
Sbjct: 220 VTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250

Length = 260

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 15/191 (7%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +  LITG  SGIG   +      G  V    R+++     V+AL + G++A  F+ D   
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEE----DVAALEAEGLEA--FQLDYAE 58

Query: 75  QEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
            E    +V    E   G+LD L N  A     + EDL     R   + +  G   +    
Sbjct: 59  PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRV 118

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           +  ++K G GR       I+  S+ L      Y+    A+K A++ ++  L +E      
Sbjct: 119 IPVMRKQGQGR-------IVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMEL-QGSG 170

Query: 194 IRVNGIAPGPI 204
           I V+ I PGPI
Sbjct: 171 IHVSLIEPGPI 181

Length = 277

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 67/262 (25%), Positives = 102/262 (38%), Gaps = 40/262 (15%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           LITG G  IG  ++      G  V +  R       A+  LR  G  A   + D      
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHY---PAIDGLRQAG--AQCIQADFSTNAG 60

Query: 78  AKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSP-NGFRTVMDIDSVGTFTMCHEALK 135
               ++   +H   L  I+ NA+   +L         +    +M I     + +      
Sbjct: 61  IMAFIDELKQHTDGLRAIIHNASD--WLAEKPGAPLADVLARMMQIHVNAPYLLNLALED 118

Query: 136 YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADY--D 193
            L+  G   S      I++I+  +    S   I  AA+KAA+D +T + A    A    +
Sbjct: 119 LLRGHGHAASD-----IIHITDYVVEKGSDKHIAYAASKAALDNMTLSFA----AKLAPE 169

Query: 194 IRVNGIAPGPI----GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           ++VN IAP  I    GD     + A       A+  + + + GE+  I +    LTS   
Sbjct: 170 VKVNSIAPALILFNEGDDAAYRQKA------LAKSLLKI-EPGEEEIIDLVDYLLTSC-- 220

Query: 250 KYVNGTTLIVDGGLWLSRPRHL 271
            YV G +L VDGG      RHL
Sbjct: 221 -YVTGRSLPVDGG------RHL 235

Length = 236

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 29/88 (32%), Positives = 47/88 (53%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TGGG GIG   +    K GA V +    ++   A V  + +LG +A+    D
Sbjct: 14  LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA 99
           + +Q   ++V+  T   F ++D+L   A
Sbjct: 74  MEKQGDWQRVISITLNAFSRIDMLFQNA 101

Length = 169

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 46/223 (20%), Positives = 86/223 (38%), Gaps = 22/223 (9%)

Query: 9   ADILKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRR-----KQVLDAAVSALRSLG 62
           A +  G V L+TGG  GIG  ++    +  GA + ++GR      ++     ++AL +LG
Sbjct: 200 APLKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALG 259

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
            + +    DV      ++++E   E +G +D +++AA           +   F  V+   
Sbjct: 260 ARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPK 319

Query: 123 SVGTFTM----CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
             G   +      E L +        +  GG    + +A     A+ +    AA      
Sbjct: 320 VDGLLNLAQALADEPLDFFVLFSSVSAFFGGAGQADYAA-----ANAFLDAFAAYLRQRG 374

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIG----DTPGMNKLAPDE 217
              R L++ W A  +    G+A            G+  + P+E
Sbjct: 375 PQGRVLSINWPAWREG---GMAADLGARELLARAGLLPIEPEE 414

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 18 LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
          L+T    GIGF ++ +  K GA V I  R ++ L+ A+  L+  G +    + D+  ++ 
Sbjct: 4  LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDD 62

Query: 78 AKKVVESTFEHFGKLDILV-NA 98
           K +V+  +E  G +D LV NA
Sbjct: 63 LKNLVKEAWELLGGIDALVWNA 84

Length = 259

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 35/230 (15%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGR---RKQVLDAAVSALRSLGIKAVGFE 69
             K+A++TG  SG G   + +  K G  V    R   +++ L +  + L       V  +
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKV-QQ 60

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVN---AAAGNFLVSAEDLSPNGFRTVMDIDSVGT 126
            DV  Q  +    +   +  G++D+LVN    A G F    E++    +R   + +  G 
Sbjct: 61  LDVTDQN-SIHNFQLVLKEIGRIDLLVNNAGYANGGF---VEEIPVEEYRKQFETNVFGA 116

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----SWYQIHVAAAKAAVDAITR 182
            ++    L Y++K          G I+NIS+          S Y     ++K A++  + 
Sbjct: 117 ISVTQAVLPYMRK-------QKSGKIINISSISGRVGFPGLSPY----VSSKYALEGFSE 165

Query: 183 NLALEWGADYDIRVNGIAPG----PIGDTPGMN--KLAPDEINSKARDYM 226
           +L LE    + I V  I PG     I +  G    +   +   S  ++YM
Sbjct: 166 SLRLEL-KPFGIDVALIEPGSYNTNIWEV-GKQLAENQSET-TSPYKEYM 212

Length = 280

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.0 bits (119), Expect = 3e-07
 Identities = 71/270 (26%), Positives = 113/270 (41%), Gaps = 41/270 (15%)

Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVG 67
           +L+GK  LITG      I + I+    KHGA +     + +VL+  V  L   +G   V 
Sbjct: 5   LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFT-YQSEVLEKRVKPLAEEIGCNFVS 63

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILV--------NAAAGNFLVSAEDLSPNGFRTVM 119
            E DV   +    + +   E +G  D L+        N   G ++    D S   F   +
Sbjct: 64  -ELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYV----DTSLENFHNSL 118

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----YQIHVAAAKA 175
            I       +   A   +  GG         SI+ ++   +Y A      Y + +  AKA
Sbjct: 119 HISCYSLLELSRSAEALMHDGG---------SIVTLT---YYGAEKVIPNYNV-MGVAKA 165

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY---MPLYKLG 232
           A++A  + LA + G + +IRVN I+ GPI         A  + ++  + +    PL +  
Sbjct: 166 ALEASVKYLANDMGEN-NIRVNAISAGPIKTLASS---AIGDFSTMLKSHAATAPLKRNT 221

Query: 233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            + D+  AA+YL S+  K V G    VD G
Sbjct: 222 TQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251

Length = 260

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 49.5 bits (118), Expect = 5e-07
 Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 14/189 (7%)

Query: 79  KKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYL 137
           +++V++  +  G +D+LV N      +   +  S    R   +  S+  F +   A+  +
Sbjct: 60  EELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQM 119

Query: 138 KKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVN 197
           KK       AGGGSI+ I++ +      Y      A+AA  A+  +LA E     +I V 
Sbjct: 120 KK-------AGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELS-RDNILVY 171

Query: 198 GIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTSDTGKYVN 253
            I P    ++P     +  E N + R+ +    PL +LG   ++     +L S     + 
Sbjct: 172 AIGPNFF-NSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPIT 230

Query: 254 GTTLIVDGG 262
           G      GG
Sbjct: 231 GQFFAFAGG 239

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 56/209 (26%), Positives = 85/209 (40%), Gaps = 40/209 (19%)

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRTVMDID 122
           DV   E      E+  E  G +  + +  A        G FL    + S +GF    +I 
Sbjct: 67  DVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFL----ETSRDGFLLAQNIS 122

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH----VAAAKAAVD 178
           +     +  EA K + +GG         SI+    TL Y      +     +  AKA+++
Sbjct: 123 AYSLTAVAREAKKLMTEGG---------SIV----TLTYLGGERVVQNYNVMGVAKASLE 169

Query: 179 AITRNLALEWGADYDIRVNGIAPGPI-----GDTPGMNKLAPDEINSKARDYMPLYKLGE 233
           A  + LA + G D  IRVN I+ GPI         G N +   EI  +A    PL +   
Sbjct: 170 ASVKYLANDLGKD-GIRVNAISAGPIRTLSAKGVGGFNSIL-KEIEERA----PLRRTTT 223

Query: 234 KWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
           + ++   A +L SD  + V G  + VD G
Sbjct: 224 QEEVGDTAAFLFSDLSRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 55/277 (19%)

Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAV 66
           +L+GK  L+TG    S I F ++    + GA V +   GR  ++ +      + L   A 
Sbjct: 4   LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIA---KRLPEPAP 60

Query: 67  GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSA-EDLSPNGFRT 117
             E DV  +EH   + +   EH   LD +V++          GNFL +  ED++      
Sbjct: 61  VLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVA-TALH- 118

Query: 118 VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-SWYQIHVAAAKAA 176
                 V  +++   A   L     G S  G    L+  AT+ + A  W    +  AKAA
Sbjct: 119 ------VSAYSLKSLAKALLPLMNEGGSIVG----LDFDATVAWPAYDW----MGVAKAA 164

Query: 177 VDAITRNLALEWGADYDIRVNGIAPGPIGDT-----PGMNKLAPDEINSKARDYMPLYKL 231
           +++  R LA + G    IRVN +A GPI        PG   L  +  + +A    PL   
Sbjct: 165 LESTNRYLARDLGPR-GIRVNLVAAGPIRTLAAKAIPGFELLE-EGWDERA----PL--- 215

Query: 232 GEKWDI------AMAALYLTSDTGKYVNGTTLIVDGG 262
              WD+      A A + L SD      G  + VDGG
Sbjct: 216 --GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG 250

Length = 256

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYMPL 228
           +K A+   T   A  W     IRVN +APGP+  TP +      L  + ++S A+    +
Sbjct: 140 SKEALILWTMRQAQPWFGARGIRVNCVAPGPV-FTPILGDFRSMLGQERVDSDAK---RM 195

Query: 229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            +     + A   ++L SD  +++NG  L VDGGL
Sbjct: 196 GRPATADEQAAVLVFLCSDAARWINGVNLPVDGGL 230

Length = 241

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.4 bits (115), Expect = 1e-06
 Identities = 66/267 (24%), Positives = 107/267 (40%), Gaps = 35/267 (13%)

Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           L+GK  LITG      I + I+    + GA +A      ++ +        L  + V F 
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELV-FR 62

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVN--------AAAGNFLVSAEDLSPNGFRTVMDI 121
            DV   +   +V     +H+  LD LV+        A +G+FL   + +S   F T  +I
Sbjct: 63  CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFL---DSISREAFNTAHEI 119

Query: 122 DSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS------ATLHYTASWYQIHVAAAKA 175
            +     +   A   ++    GR+SA    I+ +S      A  +Y        +  AKA
Sbjct: 120 SAYSLPALAKAARPMMR----GRNSA----IVALSYLGAVRAIPNYNV------MGMAKA 165

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW 235
           +++A  R  A   G +  IR NGI+ GPI            ++      + PL +     
Sbjct: 166 SLEAGIRFTAACLGKE-GIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIE 224

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGG 262
           ++   A +L SD    + G    VDGG
Sbjct: 225 EVGNTAAFLLSDLSSGITGEITYVDGG 251

Length = 261

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEGDV 72
            K   ITG  SG G  ++ +    G  VA   RR   LD   +     L +  +    DV
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQL----DV 57

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
                 + VV+  F   G++D++V+ A      +AE+LS    R  +D + +G+  +   
Sbjct: 58  TDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRA 117

Query: 133 ALKYLKKGGPGR----SSAGG 149
           AL +L++ G GR    SS GG
Sbjct: 118 ALPHLRRQGGGRIVQVSSEGG 138

Length = 276

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 41/225 (18%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL--RSLGIKAVGFEGDV 72
           +  LITG  SG+G  ++ +F   G  +A+  RR   L+   + L  R  GIK      DV
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDV 62

Query: 73  RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGF---RTVMDIDSVGTFT 128
              +   +V     +  G LD ++VNA  G        L    F   +   + + V    
Sbjct: 63  NDHDQVFEVFAEFRDELGGLDRVIVNAGIGK----GARLGTGKFWANKATAETNFVAALA 118

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATL-------HYTASWYQIHVAAAKAAVDAIT 181
            C  A++  ++        G G ++ IS+            A  Y    AA+KA V ++ 
Sbjct: 119 QCEAAMEIFRE-------QGSGHLVLISSVSAVRGLPGVKAA--Y----AASKAGVASLG 165

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM 226
             L  E  A   I+V+ I PG I            E+N+KA+   
Sbjct: 166 EGLRAE-LAKTPIKVSTIEPGYI----------RSEMNAKAKSTP 199

Length = 248

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 46.8 bits (111), Expect = 4e-06
 Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 12/137 (8%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA-VGFE--- 69
           GKV +ITG  SGIGFE +  F  HGA V +  R      AAVS +     KA V      
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 70  -GDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              +R  +   +  ++       L +LV NAA          L+ +G  T   ++ +G F
Sbjct: 61  LASLRSVQRFAEAFKAKNSP---LHVLVCNAAV---FALPWTLTEDGLETTFQVNHLGHF 114

Query: 128 TMCHEALKYLKKGGPGR 144
            +       L++  P R
Sbjct: 115 YLVQLLEDVLRRSAPAR 131

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 6e-06
 Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 8/158 (5%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE-GDVR 73
           K   +TG  SGIG   + +    GA + +  R    L   V+  R+LG         D+ 
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             +             G +D+++N A  +   + + L+   +R ++D++ +G   +    
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETF 120

Query: 134 LKYLKKGGPGR-----SSAGGGSILNISATLHYTASWY 166
           +  +   G G      SSA G  ++ +     Y+AS +
Sbjct: 121 VPPMVAAGRGGHLVNVSSAAG--LVALPWHAAYSASKF 156

Length = 272

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 56/202 (27%), Positives = 78/202 (38%), Gaps = 25/202 (12%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
            V LITG  SGIG  ++  F   G  V    R+       V AL + G  AV    DV  
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARK----AEDVEALAAAGFTAVQL--DVND 55

Query: 75  QEHAKKVVESTFEHFGKLDILVN----AAAGNFLVSAEDLSPNGFRT-VMDIDSVGTFTM 129
                ++ E      G LD+L+N     A G  L    +     F T V  +  VG    
Sbjct: 56  GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAV--VGVTRA 113

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               L         RS    G ++NI +      + +     A+KAAV A++  L LE  
Sbjct: 114 LFPLL--------RRSR---GLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLEL- 161

Query: 190 ADYDIRVNGIAPGPIGDTPGMN 211
           A + ++V  + PG I      N
Sbjct: 162 APFGVQVMEVQPGAIASQFASN 183

Length = 274

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 44.8 bits (107), Expect = 9e-06
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR---KQVLDAAVSALRSLGIKAVGFEG 70
              LITGG  G+G  ++    + GA  + ++ R         A ++ L + G +      
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
           DV  ++    V+ +     G L  +++AA          L+P  F  V+
Sbjct: 61  DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVL 109

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 50/227 (22%), Positives = 86/227 (37%), Gaps = 39/227 (17%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
            L+TGG   IG  +  +  + G  V ++GRR++        +R         EGD+   +
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRF-------HEGDLTDPD 53

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             ++++        + D +++ AA +  V A    P  F   +  + +GT  +   A + 
Sbjct: 54  ALERLLAEV-----QPDAVIHLAAQSG-VGASFEDPADF---IRANVLGTLRLLEAARRA 104

Query: 137 LKKGGPGR----SSA---GGGSILNIS-ATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
               G  R    SS+   G  +   I+  T     S Y    AAAK A + +    A  +
Sbjct: 105 ----GVKRFVFASSSEVYGDVADPPITEDTPLGPLSPY----AAAKLAAERLVEAYARAY 156

Query: 189 GADYDIRVNGIAP---GPIGDTPGMNKLAPDEINSKARDYMPLYKLG 232
           G      V        GP    P +  + P  I  +  +  P+  LG
Sbjct: 157 GLRA---VILRLFNVYGPGNPDPFVTHVIPALIR-RILEGKPILLLG 199

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 44.0 bits (105), Expect = 2e-05
 Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 18  LITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAA---VSALRSLGIKAVGFEGDVR 73
           L+TGG  G+G E++    + GA  + ++ R       A   ++ L + G +      DV 
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
            ++  + ++         L  +++AA         +++   F  V+
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVL 109

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 44.4 bits (105), Expect = 3e-05
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR--SLGIKAVGFEGD 71
           GK  +ITG  +GIG E + +  + GA V +  R     + A + +R  +L  + +    D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   +  +           +LD+L+N A    +      + +GF     ++ +G F + +
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAG--VMRCPYSKTEDGFEMQFGVNHLGHFLLTN 118

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLH 160
             L  LKK  P R       I+N+S+  H
Sbjct: 119 LLLDLLKKSAPSR-------IVNVSSLAH 140

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 11/92 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD--AAVSALRSLG--IKAVG 67
           L GKVAL+TG   GIG  I+    + GA V         LD  AA  AL ++   +    
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVV-------CLDVPAAGEALAAVANRVGGTA 260

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAA 99
              D+   +   ++ E   E  G LDI+V+ A
Sbjct: 261 LALDITAPDAPARIAEHLAERHGGLDIVVHNA 292

Length = 450

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 7e-05
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 10/96 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR----------RKQVLDAAVSALRSL 61
           L+GKVAL+ G   G G  I+ + G  GA+V + GR          R + ++     + + 
Sbjct: 6   LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA 65

Query: 62  GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVN 97
           G + +  + D    E  + +VE      G+LDILVN
Sbjct: 66  GGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVN 101

Length = 305

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 52/202 (25%), Positives = 79/202 (39%), Gaps = 28/202 (13%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ 75
             LITG  SGIG +++  + K G  V   GR + VLD   +   +  I  + F  DV   
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSAN--IFTLAF--DVTDH 58

Query: 76  EHAKKVVESTFEHFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCH 131
              K  +      F     + NA    ++    V A  ++      V +++ +G    C 
Sbjct: 59  PGTKAALSQL--PFIPELWIFNAGDCEYMDDGKVDATLMA-----RVFNVNVLGV-ANCI 110

Query: 132 EALK-YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
           E ++ +L     G      GSI +  A     A        A+KAAV    R L L+   
Sbjct: 111 EGIQPHLS---CGHRVVIVGSIASELALPRAEA------YGASKAAVAYFARTLQLDLRP 161

Query: 191 DYDIRVNGIAPGPIGDTPGMNK 212
              I V  + PG +  TP  +K
Sbjct: 162 K-GIEVVTVFPGFV-ATPLTDK 181

Length = 240

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 37/210 (17%), Positives = 67/210 (31%), Gaps = 41/210 (19%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           L+TGG   IG  +  +    G  V         LD     L  L         D+  ++ 
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVR-------GLDRLRDGLDPLLSGVEFVVLDLTDRDL 56

Query: 78  AKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYL 137
             ++ +      G  D +++ AA     S  D + +     +D++  GT  +   A    
Sbjct: 57  VDELAK------GVPDAVIHLAA---QSSVPDSNASDPAEFLDVNVDGTLNLLEAA---- 103

Query: 138 KKGGPGR----SSAGG------GSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
           +  G  R    SS            ++         + Y      +K A +     L   
Sbjct: 104 RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPY----GVSKLAAEQ----LLRA 155

Query: 188 WGADYDIRVNGIAPGPI---GDTPGMNKLA 214
           +   Y + V  + P  +   GD P ++   
Sbjct: 156 YARLYGLPVVILRPFNVYGPGDKPDLSSGV 185

Length = 314

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 71/284 (25%), Positives = 103/284 (36%), Gaps = 61/284 (21%)

Query: 10  DILKGKVALITG--GGSGIGFEISTQFGKHGASVAIM---GRRKQVLDAAVSALRSLGIK 64
            IL GK  ++ G      I +  +      GA+V       R K+ L   V     L   
Sbjct: 3   GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLL--- 59

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFR 116
               E DV   E  ++   +  E  GK+D +V+A A        GN      D S +G+ 
Sbjct: 60  ---VECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVT----DTSRDGYA 112

Query: 117 TVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH----VAA 172
              DI +     +   A   L  G          SI+    TL Y  S   I     +  
Sbjct: 113 LAQDISAYSLIAVAKYARPLLNPGA---------SIV----TLTYFGSERAIPNYNVMGI 159

Query: 173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG 232
           AKAA+++  R LA + G    IRVN I+ G +        LA   I    + +  L K  
Sbjct: 160 AKAALESSVRYLARDLGKK-GIRVNAISAGAV------KTLAVTGI----KGHKDLLKES 208

Query: 233 EKW----------DIAMAALYLTSDTGKYVNGTTLIVDGGLWLS 266
           +            ++   A +L SD    V G  + VD G+ L 
Sbjct: 209 DSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGVHLI 252

Length = 252

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 14/100 (14%)

Query: 9   ADIL--KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           ADI    G+VA++TG  +G+G+E +      GA V +  R      AA +      I A 
Sbjct: 9   ADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAAR-----ITAA 63

Query: 67  GFEGDVRRQE-------HAKKVVESTFEHFGKLDILVNAA 99
               DV  QE         +   ++    + ++D+L+N A
Sbjct: 64  TPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNA 103

Length = 306

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 21/198 (10%)

Query: 10  DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           DI K  + LIT  GS +G  IS  F + GA++ +  + +  L        +L      F+
Sbjct: 2   DI-KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQ 60

Query: 70  GDVRRQEHAKKVVESTFEHFGK-LDILVNAAAGNFLVSAEDLSP-NGFRTVMDIDSVGT- 126
                QE  + + ++  + F +  D+LVN    + L S  D  P   F  +  + S+ + 
Sbjct: 61  LKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESF--IQQLSSLAST 118

Query: 127 -FTMCHEALKYLKKGGPGRSSAGGGSILNISA--TLHYTASWYQIHVAAAKAAVDAITRN 183
            FT    A + +      R     G I+N+ +              V ++ A V   T +
Sbjct: 119 LFTYGQVAAERM------RKRNKKGVIVNVISHDDHQDLTG-----VESSNALVSGFTHS 167

Query: 184 LALEWGADYDIRVNGIAP 201
            A E    ++IRV G+ P
Sbjct: 168 WAKEL-TPFNIRVGGVVP 184

Length = 227

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 39/172 (22%), Positives = 60/172 (34%), Gaps = 18/172 (10%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
           ALI G   GIG  ++      G  + + GR    L    + + +L   A           
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPA---------DV 51

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
            A+  V +  +  G LD+LV AA            P  +R ++D +  G   +   AL  
Sbjct: 52  AAELEVWALAQELGPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHALAL 111

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           L  G           ++ +     Y         AAAKAA++A       E 
Sbjct: 112 LAAGARLVFLGAYPELVMLPGLSAY---------AAAKAALEAYVEVARKEV 154

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 8/92 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSL--GIKAVGF 68
           L GK  L+TGGG  IG E+  Q  K      I+  R +  L      LR     +K   +
Sbjct: 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFY 307

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA 100
            GDVR     +  VE   E   K+DI+ +AAA
Sbjct: 308 IGDVRD----RDRVERAMEGH-KVDIVFHAAA 334

Length = 588

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 35/192 (18%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRR----KQVLDAAVSALRSLGIKAV--G 67
           G  AL+TG   GIG   + Q  + G ++ ++ R     K V D+  S      IK V   
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLD--ILVNAA------AGNFLVSAEDLSPNGFRTVM 119
           F GD+   E  K++ E+       LD  +L+N        A  F    E+L  N    ++
Sbjct: 113 FSGDI--DEGVKRIKETIE----GLDVGVLINNVGVSYPYARFFHEVDEELLKN----LI 162

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI---SATLHYTASWYQIHVAAAKAA 176
            ++  GT  +    L       PG      G+I+NI   +A +  +   Y ++ AA KA 
Sbjct: 163 KVNVEGTTKVTQAVL-------PGMLKRKKGAIINIGSGAAIVIPSDPLYAVY-AATKAY 214

Query: 177 VDAITRNLALEW 188
           +D  +R L +E+
Sbjct: 215 IDQFSRCLYVEY 226

Length = 320

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 17/49 (34%), Positives = 29/49 (59%)

Query: 12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
          L GK A++TG   G+G  ++ +    GA V +  R +   +AAV+A+R+
Sbjct: 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT 60

Length = 313

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 13/97 (13%)

Query: 173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEIN------SKARDYM 226
           AKA+++A  R +A   G +  +RVN I+ GPI        LA   I       +      
Sbjct: 162 AKASLEANVRYMANAMGPE-GVRVNAISAGPI------RTLAASGIKDFRKMLAHCEAVT 214

Query: 227 PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           P+ +     D+  +A +L SD    ++G  + VDGG 
Sbjct: 215 PIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251

Length = 262

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF---EGDVR 73
            +ITG  SG+G   +      G    IM  R      A  A +SLG+    +     D+ 
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRD--FLKAEQAAKSLGMPKDSYTIMHLDLG 63

Query: 74  RQEHAKKVVESTFEHFGK-LDILVNAAAGNFLVSAEDL-SPNGFRTVMDIDSVGTFTMCH 131
             +  ++ V+  F   G+ LD LV  AA  F  + E   + +GF   +  + +G F +C+
Sbjct: 64  SLDSVRQFVQ-QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCN 122

Query: 132 EALKYLKK 139
             L  LK 
Sbjct: 123 LLLDDLKN 130

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	299
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.98
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.89
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.89
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.88
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.87
PRK06720	169	hypothetical protein; Provisional	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PLN02572	442	UDP-sulfoquinovose synthase	99.83
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.83
PLN02583	297	cinnamoyl-CoA reductase	99.82
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.82
PLN02650	351	dihydroflavonol-4-reductase	99.82
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.82
PLN02214	342	cinnamoyl-CoA reductase	99.81
PLN00198	338	anthocyanidin reductase; Provisional	99.8
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.8
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.79
PLN02240	352	UDP-glucose 4-epimerase	99.79
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.78
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.77
PLN02686	367	cinnamoyl-CoA reductase	99.76
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.76
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.76
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.74
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.74
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.74
PLN02427	386	UDP-apiose/xylose synthase	99.73
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.71
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.7
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.7
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.69
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.69
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.67
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.67
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
PLN02260	668	probable rhamnose biosynthetic enzyme	99.64
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.64
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.63
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.63
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.62
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.62
PLN02206	442	UDP-glucuronate decarboxylase	99.6
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.57
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.55
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.54
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.53
CHL00194	317	ycf39 Ycf39; Provisional	99.52
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.51
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.51
PRK07201	657	short chain dehydrogenase; Provisional	99.49
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.49
PRK05865	854	hypothetical protein; Provisional	99.46
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.45
PLN02996	491	fatty acyl-CoA reductase	99.43
PLN02778	298	3,5-epimerase/4-reductase	99.38
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.37
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.35
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.34
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.3
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.28
PRK08309	177	short chain dehydrogenase; Provisional	99.26
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.26
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.26
PRK12320	699	hypothetical protein; Provisional	99.2
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.17
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.17
PLN02503	605	fatty acyl-CoA reductase 2	99.16
PLN00016	378	RNA-binding protein; Provisional	99.16
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.16
PLN02260	668	probable rhamnose biosynthetic enzyme	99.15
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.14
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.13
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.11
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.94
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.9
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.86
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.81
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.81
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.7
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.63
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.62
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.6
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.53
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.53
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.44
COG2910	211	Putative NADH-flavin reductase [General function p	98.39
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.36
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.35
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.25
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.24
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.22
PLN00106	323	malate dehydrogenase	98.21
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.17
PRK09620	229	hypothetical protein; Provisional	98.09
PRK14982	340	acyl-ACP reductase; Provisional	98.07
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.92
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.91
PTZ00325	321	malate dehydrogenase; Provisional	97.87
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.78
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.78
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.75
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.71
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.67
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.66
COG3268	382	Uncharacterized conserved protein [Function unknow	97.65
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.63
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.62
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.6
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.53
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.51
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.49
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.47
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.44
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.41
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.4
PRK06849	389	hypothetical protein; Provisional	97.38
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.37
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.33
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.32
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.31
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.3
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.23
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.19
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.19
KOG2774	366	consensus NAD dependent epimerase [General functio	97.19
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.18
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.14
PRK14968	188	putative methyltransferase; Provisional	97.14
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.11
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.11
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.1
PRK05086	312	malate dehydrogenase; Provisional	97.08
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.06
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.04
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.04
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.01
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.0
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.0
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.0
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.99
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.96
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.95
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.95
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.94
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.9
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.9
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.86
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.85
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.85
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.84
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.83
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.82
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.82
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.8
PTZ00117	319	malate dehydrogenase; Provisional	96.8
PLN00203	519	glutamyl-tRNA reductase	96.79
PRK04148	134	hypothetical protein; Provisional	96.78
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.77
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.77
PRK09496	453	trkA potassium transporter peripheral membrane com	96.75
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.73
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.71
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.65
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.65
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.64
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.64
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.63
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.61
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.6
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.53
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.52
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.51
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.49
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.47
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.39
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.35
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.35
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.35
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.31
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.31
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.27
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.27
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.22
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.2
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.2
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.18
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.17
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.17
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.16
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.1
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.08
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.08
PRK09496	453	trkA potassium transporter peripheral membrane com	96.07
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.06
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.03
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.03
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.0
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.99
PRK08223	287	hypothetical protein; Validated	95.99
PLN02928	347	oxidoreductase family protein	95.98
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.95
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.94
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.92
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.92
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	95.92
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.83
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.8
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.8
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.79
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.77
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.77
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.75
PRK14967	223	putative methyltransferase; Provisional	95.75
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.75
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.74
PRK08328	231	hypothetical protein; Provisional	95.74
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.71
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.71
PRK12480	330	D-lactate dehydrogenase; Provisional	95.7
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.7
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.68
PLN02740	381	Alcohol dehydrogenase-like	95.67
PLN02602	350	lactate dehydrogenase	95.67
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.66
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.66
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.66
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.64
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.61
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.58
PRK07877	722	hypothetical protein; Provisional	95.58
PRK08655	437	prephenate dehydrogenase; Provisional	95.55
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.54
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.53
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.52
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.5
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.49
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.46
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.45
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	95.39
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.38
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.33
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.32
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.31
PRK13771	334	putative alcohol dehydrogenase; Provisional	95.26
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.26
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.21
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.21
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.2
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.16
PRK13243	333	glyoxylate reductase; Reviewed	95.14
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.08
PLN02494	477	adenosylhomocysteinase	95.02
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.02
COG2894	272	MinD Septum formation inhibitor-activating ATPase	95.02
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.99
PTZ00354	334	alcohol dehydrogenase; Provisional	94.94
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.92
PRK07411	390	hypothetical protein; Validated	94.92
PRK14851	679	hypothetical protein; Provisional	94.91
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.9
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.9
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.88
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.88
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.88
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.88
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.86
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.82
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.81
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	94.81
PRK05479	330	ketol-acid reductoisomerase; Provisional	94.81
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	94.79
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.76
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.73
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	94.71
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.68
PRK06223	307	malate dehydrogenase; Reviewed	94.68
PLN02827	378	Alcohol dehydrogenase-like	94.67
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.66
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.66
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.66
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.65

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=3.7e-48  Score=303.76  Aligned_cols=246  Identities=29%  Similarity=0.406  Sum_probs=223.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++.|+++||||++|||++++..|+++|++|++.+++....++....+... ++...+.||+++.++++.++++..+.+|
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            467899999999999999999999999999999999998888888777554 3566789999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++++||||||+..+..+.....++|++.+.+|+.|.|+++|++.+.|......     +.+||||||+-+..+.-++.-|
T Consensus        90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~-----~~sIiNvsSIVGkiGN~GQtnY  164 (256)
T KOG1200|consen   90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQ-----GLSIINVSSIVGKIGNFGQTNY  164 (256)
T ss_pred             CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCC-----CceEEeehhhhcccccccchhh
Confidence            99999999999998888889999999999999999999999999996554321     4599999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+++.+|++++++|++ .++||||+++|||+.|| +...+ ++.....+....|.+|++++||+|+.+.||+|+.+.
T Consensus       165 AAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tp-MT~~m-p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ss  241 (256)
T KOG1200|consen  165 AASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATP-MTEAM-PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASS  241 (256)
T ss_pred             hhhcCceeeeeHHHHHHHh-hcCceEeEeccccccCh-hhhhc-CHHHHHHHHccCCccccCCHHHHHHHHHHHhccccc
Confidence            9999999999999999998 89999999999999755 44444 566778888999999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      |+||+.+.++||+.+
T Consensus       242 YiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  242 YITGTTLEVTGGLAM  256 (256)
T ss_pred             cccceeEEEeccccC
Confidence            999999999999864

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-47  Score=326.94  Aligned_cols=248  Identities=24%  Similarity=0.336  Sum_probs=220.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+.++...+++... +.++.++.+|++++++++++++++. +
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            3578999999999999999999999999999999999999888888887654 5578999999999999999999985 5


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +|++|++|||+|+....++.+.+.++|++.+++|+.+++.++++++|+|++++       .|+||++||..+..+.+++.
T Consensus        83 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-------~g~Ii~isS~~~~~~~~~~~  155 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-------FGRIIYSTSVAIKEPIPNIA  155 (263)
T ss_pred             hCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEEcCccccCCCCcch
Confidence            89999999999987777888899999999999999999999999999998875       68999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHHHhcCCCCCCCCHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~  239 (299)
                      .|+++|+|+.+|+++++.|++ ++|||||+|+||+++|++....         ...++..+......|++++.+|+|+|+
T Consensus       156 ~y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  234 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELG-PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGY  234 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHH
Confidence            999999999999999999997 8999999999999987643211         111233344556678999999999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++.||+++.+.++||+++.+|||+..+
T Consensus       235 ~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        235 LVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HHHHHhcchhcCccCceEEECCCcccc
Confidence            999999999999999999999998764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=323.95  Aligned_cols=241  Identities=23%  Similarity=0.238  Sum_probs=209.4

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |+||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.  +.++.++++|++++++++++++++.+++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            579999999999  8999999999999999999999984 4444444442  2468889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           90 GKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        90 g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      |++|+||||||+...    .++.+.+.++|+..+++|+.+++.++++++|+|.+         .|+||+++|..+..+.+
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---------~g~Iv~iss~~~~~~~~  152 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---------GASIVTLTYFGSERAIP  152 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---------CceEEEEeccCccccCC
Confidence            999999999997643    57788899999999999999999999999999853         47999999999999989


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      ++..|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.......++..+......|.+++.+|+|+|+++.||+
T Consensus       153 ~~~~Y~asKaal~~l~~~la~el~-~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~  231 (252)
T PRK06079        153 NYNVMGIAKAALESSVRYLARDLG-KKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLL  231 (252)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHh
Confidence            999999999999999999999997 8899999999999987643222222344444556678899999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++.+.+++|+++.+|||+++
T Consensus       232 s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        232 SDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             CcccccccccEEEeCCceec
Confidence            99999999999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-46  Score=321.05  Aligned_cols=246  Identities=30%  Similarity=0.429  Sum_probs=215.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++||++|||||++|||++++++|+++|++|++++|+..  +...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            3577999999999999999999999999999999988643  44555565566789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|++|||||+....++.+.+.++|++++++|+.+++.++++++|.|.+++.      +|+||++||..+..+.++...
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~------~g~ii~isS~~~~~~~~~~~~  155 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN------GGKIINIASMLSFQGGIRVPS  155 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC------CCEEEEeCChhhcCCCCCCcc
Confidence            99999999999887778888999999999999999999999999999987531      489999999999999888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+...+......|.+++.+|+|+|+++.||+++.+
T Consensus       156 Y~asK~a~~~l~~~la~e~~-~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~  234 (251)
T PRK12481        156 YTASKSAVMGLTRALATELS-QYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSAS  234 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999997 88999999999999876433222222333344566788999999999999999999999


Q ss_pred             CCccCcEEEeCCccc
Q 022335          250 KYVNGTTLIVDGGLW  264 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~  264 (299)
                      .+++|++|.+|||+.
T Consensus       235 ~~~~G~~i~vdgg~~  249 (251)
T PRK12481        235 DYVTGYTLAVDGGWL  249 (251)
T ss_pred             cCcCCceEEECCCEe
Confidence            999999999999974

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-46  Score=321.26  Aligned_cols=250  Identities=26%  Similarity=0.269  Sum_probs=210.5

Q ss_pred             CcCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .+..++||+++||||++  |||+++|+.|+++|++|++++|+. ..++..+++.+..+...++++|++++++++++++++
T Consensus         2 ~~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          2 TTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             CCcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHH
Confidence            34567899999999997  999999999999999999998874 334444555433122346799999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           86 FEHFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      .+++|++|+||||+|+...    .++.+.+.++|++.+++|+.+++.++++++|+|.+         +|+||++||..+.
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---------~G~Iv~isS~~~~  151 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---------GGSIVTLTYYGAE  151 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---------CceEEEEecCccc
Confidence            9999999999999997542    46778899999999999999999999999999953         4899999999998


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+.+++..|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+|+++
T Consensus       152 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~  230 (260)
T PRK06603        152 KVIPNYNVMGVAKAALEASVKYLANDMG-ENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAA  230 (260)
T ss_pred             cCCCcccchhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            8889999999999999999999999997 889999999999998764221111122333445567899999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccCCC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      +||+|+.+.++||+++.+|||+.+...
T Consensus       231 ~~L~s~~~~~itG~~i~vdgG~~~~~~  257 (260)
T PRK06603        231 VYLFSELSKGVTGEIHYVDCGYNIMGS  257 (260)
T ss_pred             HHHhCcccccCcceEEEeCCcccccCc
Confidence            999999999999999999999887543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.1e-46  Score=323.34  Aligned_cols=244  Identities=27%  Similarity=0.331  Sum_probs=207.0

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+....+...+...+.+ ...++++|+++.++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHH
Confidence            36799999999997  99999999999999999999998644333322222223 2357899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 FGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +|++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|+|.+         +|+||++||..+..+.
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---------~G~Iv~isS~~~~~~~  153 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---------GGSMLTLTYGGSTRVM  153 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---------CceEEEEcCCCccccC
Confidence            9999999999997643    46678899999999999999999999999999962         4899999999998899


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch-HHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      +++..|++||+|+.+|+++|+.|++ ++|||||+|+||+++|++. ...... ..........|++++.+|+|+|++++|
T Consensus       154 ~~~~~Y~asKaAl~~l~r~la~el~-~~gIrVn~v~PG~i~T~~~-~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~f  231 (271)
T PRK06505        154 PNYNVMGVAKAALEASVRYLAADYG-PQGIRVNAISAGPVRTLAG-AGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALY  231 (271)
T ss_pred             CccchhhhhHHHHHHHHHHHHHHHh-hcCeEEEEEecCCcccccc-ccCcchHHHHHHHhhcCCccccCCHHHHHHHHHH
Confidence            9999999999999999999999997 8999999999999987643 222221 222333456788899999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++.+.++||+.+.+|||+.+.
T Consensus       232 L~s~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        232 LLSDLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             HhCccccccCceEEeecCCcccC
Confidence            99999999999999999998764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.9e-46  Score=322.47  Aligned_cols=243  Identities=28%  Similarity=0.318  Sum_probs=205.1

Q ss_pred             CCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        12 l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      |++|++|||||+  +|||+++|+.|+++|++|++++|+.. .++..+++. +.+.. .++++|+++.++++++++++.+.
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            569999999997  89999999999999999999999853 222333332 23334 67899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 FGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +|++|+||||||+...    .++.+.+.++|++++++|+.++++++++++|.|.+         .|+||++||..+..+.
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---------~g~Iv~isS~~~~~~~  151 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---------GASVLTLSYLGGVKYV  151 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---------CCcEEEEecCCCccCC
Confidence            9999999999997642    56788899999999999999999999999999964         4789999999999889


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch-HHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      +++..|++||+|+.+|+++++.|++ ++||+||+|+||+++|++ ....... ..........|++++.+|+|+|++++|
T Consensus       152 ~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~-~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~f  229 (274)
T PRK08415        152 PHYNVMGVAKAALESSVRYLAVDLG-KKGIRVNAISAGPIKTLA-ASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMY  229 (274)
T ss_pred             CcchhhhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHH-HhccchhhHHhhhhhhhCchhccCCHHHHHHHHHH
Confidence            9999999999999999999999997 889999999999998753 2222211 111222235688899999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccCC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      |+++.+.+++|+++.+|||+.+..
T Consensus       230 L~s~~~~~itG~~i~vdGG~~~~~  253 (274)
T PRK08415        230 LLSDLSSGVTGEIHYVDAGYNIMG  253 (274)
T ss_pred             HhhhhhhcccccEEEEcCcccccC
Confidence            999989999999999999987643

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.1e-45  Score=319.28  Aligned_cols=246  Identities=27%  Similarity=0.328  Sum_probs=210.9

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQ--VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .++||+++||||+  +|||+++|++|+++|++|+++.|+.+  +.++..+++.+...++.++++|++++++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4679999999986  89999999999999999998876543  3445556665544567789999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           87 EHFGKLDILVNAAAGNF----LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +++|++|+||||||+..    ..++.+.+.++|++.+++|+.+++.++++++|.|++         .|+||++||..+..
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---------~g~Iv~isS~~~~~  153 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---------GGSIVTLTYLGGVR  153 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---------CCeEEEEecccccc
Confidence            99999999999999754    256788899999999999999999999999999964         47999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.+++..|++||+|+.+|+++|+.|++ ++||+||+|+||+++|+........++..+......|.+++.+|+|+++++.
T Consensus       154 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~  232 (258)
T PRK07370        154 AIPNYNVMGVAKAALEASVRYLAAELG-PKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAA  232 (258)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHHHhC-cCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHH
Confidence            999999999999999999999999997 8999999999999987643221111233334455678899999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ||+++.+.+++|+++.+|||+.+.
T Consensus       233 fl~s~~~~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        233 FLLSDLASGITGQTIYVDAGYCIM  256 (258)
T ss_pred             HHhChhhccccCcEEEECCccccc
Confidence            999999999999999999998764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-45  Score=318.54  Aligned_cols=245  Identities=23%  Similarity=0.241  Sum_probs=207.7

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|++|++|||||  ++|||+++|++|+++|++|++++|+. +.++..+++....+....++||++++++++++++++.++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999997  67999999999999999999988764 334445555443334567899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCC----C-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           89 FGKLDILVNAAAGNFLV----S-AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      +|++|++|||||+....    + +.+.+.++|+..+++|+.++++++++++|.|+++        +|+||++||..+..+
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--------~g~Iv~iss~~~~~~  153 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--------NSAIVALSYLGAVRA  153 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--------CcEEEEEcccccccC
Confidence            99999999999986532    2 3467788999999999999999999999999653        478999999999989


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .+++..|++||+|+.+|+++++.|++ ++||+||+|+||+++|++........+..+......|++++.+|+|+|+++.|
T Consensus       154 ~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~  232 (261)
T PRK08690        154 IPNYNVMGMAKASLEAGIRFTAACLG-KEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAF  232 (261)
T ss_pred             CCCcccchhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999997 89999999999999876432211123333445566799999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+++.+.+++|++|.+|||+.+
T Consensus       233 l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        233 LLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             HhCcccCCcceeEEEEcCCccc
Confidence            9999999999999999999876

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-45  Score=315.01  Aligned_cols=246  Identities=29%  Similarity=0.394  Sum_probs=217.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999999999888887777788899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-C-Cc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-W-YQ  167 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-~-~~  167 (299)
                      +++|+||||+|+....++.+.+.++|++.+++|+.+++.++++++|.|.++..      +++||++||..+..+. + ..
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~~~~~~  158 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ------GGVIINTASMSGHIINVPQQV  158 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC------CcEEEEECcHHhcCCCCCCCc
Confidence            99999999999887778888899999999999999999999999999987531      4789999998876533 3 45


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. ..  .+..+.+....|.+++.+|+|+|++++||+++
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~-~~gI~vn~i~PG~v~t~~~~-~~--~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~  234 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELA-PHKIRVNSVSPGYILTELVE-PY--TEYQPLWEPKIPLGRLGRPEELAGLYLYLASE  234 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHh-HhCeEEEEeecCCCCCcccc-cc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            7899999999999999999997 88999999999999876532 22  12233445567889999999999999999999


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      .+.++||+.+.+|||+.+
T Consensus       235 ~~~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        235 ASSYMTGSDIVIDGGYTC  252 (253)
T ss_pred             ccCCcCCCeEEECCCccC
Confidence            999999999999999864

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-45  Score=315.49  Aligned_cols=247  Identities=29%  Similarity=0.466  Sum_probs=220.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS--LGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++..  .+.++.++.+|++++++++++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47799999999999999999999999999999999999998888888876  4567889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|++|||||+....+..+.+.++|+.++++|+.+++.++++++|.|.++.       .++||++||..+..+.++..
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~  156 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-------RGSIVNIASTHAFKIIPGCF  156 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-------CeEEEEECChhhccCCCCch
Confidence            99999999999987666677788999999999999999999999999998765       68999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---CCc-hHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---LAP-DEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      .|++||+|+.+|+++++.|++ ++||+||+|+||+++|+.....   ... +..........|.+++.+|+|+|++++||
T Consensus       157 ~Y~~sKaa~~~~~~~la~el~-~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl  235 (260)
T PRK07063        157 PYPVAKHGLLGLTRALGIEYA-ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFL  235 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999997 8899999999999987653221   111 22233445667889999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++.+.+++|+++.+|||+.+
T Consensus       236 ~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        236 ASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             cCccccccCCcEEEECCCeee
Confidence            999999999999999999865

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-45  Score=315.91  Aligned_cols=245  Identities=27%  Similarity=0.326  Sum_probs=208.0

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++||++|||||+  +|||+++|++|+++|++|++++|+.+..+. .+++.+....+.+++||+++.++++++++++.++
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPY-VEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHH-HHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            4789999999998  599999999999999999999998643222 2233222123567899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 FGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +|++|++|||||+...    .++.+.+.++|++++++|+.++++++++++|+|++         .|+||++||..+..+.
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---------~g~Ii~iss~~~~~~~  156 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---------GGSLLTMSYYGAEKVV  156 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---------CCEEEEEeccccccCC
Confidence            9999999999997643    46778899999999999999999999999999953         4799999999998888


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +++..|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+|++++||
T Consensus       157 ~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L  235 (258)
T PRK07533        157 ENYNLMGPVKAALESSVRYLAAELG-PKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFL  235 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            8999999999999999999999997 889999999999998765332211233334455677889999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +++...+++|+.+.+|||++++
T Consensus       236 ~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        236 ASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             hChhhccccCcEEeeCCccccc
Confidence            9998899999999999998764

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.2e-45  Score=301.37  Aligned_cols=229  Identities=27%  Similarity=0.305  Sum_probs=202.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++|||||+|||.++|+.|++.|++|++++|+.++++++++++.+  .++..+..|++|.++++.+++.+.++|+
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            45689999999999999999999999999999999999999999999976  6799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||.....++.+.+.++|+.++++|+.|.++.+++++|.|.+++       .|+|||+||+++..+.++...|
T Consensus        81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-------~G~IiN~~SiAG~~~y~~~~vY  153 (246)
T COG4221          81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-------SGHIINLGSIAGRYPYPGGAVY  153 (246)
T ss_pred             cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-------CceEEEeccccccccCCCCccc
Confidence            999999999998889999999999999999999999999999999999998       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+|+.+|++.|+.|+. .++|||..|+||.+.++... ...++...+...+........+|+|+|+++.|.++.+..
T Consensus       154 ~ATK~aV~~fs~~LR~e~~-g~~IRVt~I~PG~v~~~~~s-~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         154 GATKAAVRAFSLGLRQELA-GTGIRVTVISPGLVETTEFS-TVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhc-CCCeeEEEecCceecceecc-cccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence            9999999999999999997 89999999999999654322 222222222222222333468999999999999986543

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-45  Score=312.64  Aligned_cols=249  Identities=34%  Similarity=0.459  Sum_probs=220.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||++++++|+++|++|++++|++++++.+.+++...+.++.++.+|++++++++++++++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999999999999999988888887777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCCch
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQI  168 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~  168 (299)
                      ++|+||||||+... .++.+.+.++|++++++|+.+++.++++++|.|+++.       .++||++||..+. .+.+++.
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-------~~~iv~~sS~~~~~~~~~~~~  155 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-------GGSLIFTSTFVGHTAGFPGMA  155 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CceEEEEechHhhccCCCCcc
Confidence            99999999998643 5777889999999999999999999999999998875       6899999999886 5778899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|++||+|++.++++++.+++ ++||+||+|+||+++|++.......++.........|.+++.+|+|+|+.++||+++.
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        156 AYAASKAGLIGLTQVLAAEYG-AQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999997 8899999999999987654332222333344455567888999999999999999998


Q ss_pred             CCCccCcEEEeCCccccCC
Q 022335          249 GKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~~  267 (299)
                      ..+++|+.+.+|||+.+.+
T Consensus       235 ~~~~~G~~~~~dgg~~~~~  253 (254)
T PRK07478        235 ASFVTGTALLVDGGVSITR  253 (254)
T ss_pred             hcCCCCCeEEeCCchhccC
Confidence            8999999999999987653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-45  Score=315.69  Aligned_cols=245  Identities=22%  Similarity=0.272  Sum_probs=207.6

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++||++|||||++  |||+++|+.|+++|++|++++|+ ++++...+++......+.++.||++++++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6799999999986  99999999999999999999987 34455556665544457789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCC-----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           90 GKLDILVNAAAGNFLVS-----AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      |++|++|||||+.....     +.+.+.++|+.++++|+.+++.+++++.|+|.+         +|+||++||..+..+.
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---------~g~Iv~iss~~~~~~~  153 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---------GSALLTLSYLGAERAI  153 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---------CcEEEEEecCCCCCCC
Confidence            99999999999754322     456788999999999999999999999986632         4789999999998888


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      +++.+|++||+|+++|+++++.|++ ++||+||+|+||+++|++. ..... .+..+......|.+++.+|+|++++++|
T Consensus       154 ~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~-~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~  231 (262)
T PRK07984        154 PNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAA-SGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF  231 (262)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhc-ccCcEEeeeecCcccchHH-hcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHH
Confidence            9999999999999999999999997 8899999999999987532 21111 2222334456788999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccCCC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      |+++...+++|+++.+|||+.+...
T Consensus       232 L~s~~~~~itG~~i~vdgg~~~~~~  256 (262)
T PRK07984        232 LCSDLSAGISGEVVHVDGGFSIAAM  256 (262)
T ss_pred             HcCcccccccCcEEEECCCcccccc
Confidence            9999999999999999999876443

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=8.4e-45  Score=312.83  Aligned_cols=253  Identities=38%  Similarity=0.531  Sum_probs=219.8

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ...|.||+++|||+++|||+++|++|++.|++|++++|+++.++.+..++...+   .++..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999999999988887654   35999999999999999999999


Q ss_pred             HHH-cCCccEEEEcCCCCCCC-CCCCCCHHHHHHHHHhhhHH-HHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           86 FEH-FGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVG-TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        86 ~~~-~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      .+. +|++|++|||||..... ++.+.+.++|+.++++|+.| .+.+.+.+.+++++..       +|.|+++||..+..
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-------gg~I~~~ss~~~~~  155 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-------GGSIVNISSVAGVG  155 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-------CceEEEEecccccc
Confidence            999 79999999999987764 78999999999999999995 6666777777777766       79999999999998


Q ss_pred             cCCCc-hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---hHHhHH--HHhcCCCCCCCCHHH
Q 022335          163 ASWYQ-IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---DEINSK--ARDYMPLYKLGEKWD  236 (299)
Q Consensus       163 ~~~~~-~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~d  236 (299)
                      +.... .+|+++|+|+++|+|++|.||+ ++|||||+|.||.+.|+.....+..   +++.+.  .....|.+++..|+|
T Consensus       156 ~~~~~~~~Y~~sK~al~~ltr~lA~El~-~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~e  234 (270)
T KOG0725|consen  156 PGPGSGVAYGVSKAALLQLTRSLAKELA-KHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEE  234 (270)
T ss_pred             CCCCCcccchhHHHHHHHHHHHHHHHHh-hcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHH
Confidence            86666 7999999999999999999997 9999999999999987652222222   233333  445678999999999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCccccCCCC
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPR  269 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~  269 (299)
                      +++.+.||+++...|++|+.+.+|||++...+.
T Consensus       235 va~~~~fla~~~asyitG~~i~vdgG~~~~~~~  267 (270)
T KOG0725|consen  235 VAEAAAFLASDDASYITGQTIIVDGGFTVVGPS  267 (270)
T ss_pred             HHHhHHhhcCcccccccCCEEEEeCCEEeeccc
Confidence            999999999988779999999999999986654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-44  Score=310.79  Aligned_cols=248  Identities=30%  Similarity=0.464  Sum_probs=218.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.+ .++...+++...+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999764 45677777776677888999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-  166 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-  166 (299)
                      +++++|++|||+|+....++.+.+.++|++++++|+.+++.+++++++.|.++.       .++||++||..+..+.++ 
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~  155 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-------GGSIVNIASMSGIIVNRGL  155 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-------CcEEEEECchhhcCCCCCC
Confidence            999999999999987777788889999999999999999999999999998765       689999999998776553 


Q ss_pred             -chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          167 -QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       167 -~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                       ...|+++|+|+++++++++.|++ ++||+||+|+||+++|++.... ...+..+......|++++.+|+|++++++||+
T Consensus       156 ~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~  233 (254)
T PRK06114        156 LQAHYNASKAGVIHLSKSLAMEWV-GRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLL  233 (254)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence             68999999999999999999997 8899999999999987654321 11222344556789999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++.+.+++|+++.+|||+.+
T Consensus       234 s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        234 SDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             CccccCcCCceEEECcCEec
Confidence            99999999999999999875

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.5e-45  Score=313.11  Aligned_cols=243  Identities=23%  Similarity=0.280  Sum_probs=206.9

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRK---QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.+++.  +.++.++++|++++++++++++++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   81 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETI   81 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHH
Confidence            4679999999997  8999999999999999999998753   33444444332  457889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           86 FEHFGKLDILVNAAAGNF----LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      .+++|++|++|||||+..    ..++.+.+.++|+..+++|+.+++.++++++|+|.+         +|+||++||..+.
T Consensus        82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---------~g~Iv~isS~~~~  152 (257)
T PRK08594         82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---------GGSIVTLTYLGGE  152 (257)
T ss_pred             HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---------CceEEEEcccCCc
Confidence            999999999999999764    246678899999999999999999999999999953         4899999999999


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+.+++..|++||+|+++|+++++.|++ ++||+||+|+||+++|+........++..+......|.+++.+|+|+|+++
T Consensus       153 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~  231 (257)
T PRK08594        153 RVVQNYNVMGVAKASLEASVKYLANDLG-KDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTA  231 (257)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHH
Confidence            9999999999999999999999999997 889999999999998763211111122223344566888999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++.+.+++|+++.+|||+.+
T Consensus       232 ~~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        232 AFLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             HHHcCcccccccceEEEECCchhc
Confidence            999999999999999999999765

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-44  Score=309.04  Aligned_cols=248  Identities=27%  Similarity=0.405  Sum_probs=223.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+++
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999998888888887766778899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.+.|.++.       .++||++||..+..+.+....
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~  157 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-------AGKIINICSMQSELGRDTITP  157 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEEccchhccCCCCCcc
Confidence            9999999999987667788889999999999999999999999999998765       689999999999888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|+|++.++++++.+++ ++||++|+|+||+++|+........++..+......|+.++.+|+|+++++.||+++.+
T Consensus       158 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~  236 (254)
T PRK08085        158 YAASKGAVKMLTRGMCVELA-RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKAS  236 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999997 88999999999999877544333333444555667889999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      ++++|+.+.+|||+..
T Consensus       237 ~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        237 DFVNGHLLFVDGGMLV  252 (254)
T ss_pred             cCCcCCEEEECCCeee
Confidence            9999999999999865

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-44  Score=312.23  Aligned_cols=246  Identities=26%  Similarity=0.269  Sum_probs=203.0

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|++|++|||||  ++|||+++|++|+++|++|++++|.....+. .+++.+......++++|++++++++++++++.++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH
Confidence            467999999996  6899999999999999999998764222122 2223222123356899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCC----C-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           89 FGKLDILVNAAAGNFLV----S-AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      +|++|++|||||+....    + +.+.+.++|++.+++|+.+++.++++++|+|.+         .|+||++||..+..+
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---------~g~Ii~iss~~~~~~  152 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---------DASLLTLSYLGAERV  152 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---------CceEEEEeccccccC
Confidence            99999999999976432    2 346788999999999999999999999999932         478999999999888


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      .+++..|++||+|+.+|+++++.|++ ++||+||+|+||+++|+.. ..... ++..+......|++++.+|+|+++++.
T Consensus       153 ~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~-~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~  230 (260)
T PRK06997        153 VPNYNTMGLAKASLEASVRYLAVSLG-PKGIRANGISAGPIKTLAA-SGIKDFGKILDFVESNAPLRRNVTIEEVGNVAA  230 (260)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCccccchh-ccccchhhHHHHHHhcCcccccCCHHHHHHHHH
Confidence            89999999999999999999999997 8899999999999987532 22211 222333445568899999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccCCC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      ||+++.+.+++|+.|.+|||++.+..
T Consensus       231 ~l~s~~~~~itG~~i~vdgg~~~~~~  256 (260)
T PRK06997        231 FLLSDLASGVTGEITHVDSGFNAVVG  256 (260)
T ss_pred             HHhCccccCcceeEEEEcCChhhccc
Confidence            99999999999999999999887654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.6e-44  Score=312.75  Aligned_cols=245  Identities=27%  Similarity=0.291  Sum_probs=204.9

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..|++|++|||||+  +|||+++|+.|+++|++|++++|+.. .++..+++.+.-+...++++|++++++++++++++.+
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHH
Confidence            35679999999997  89999999999999999999988742 2222333322212356789999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           88 HFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      ++|++|++|||||+...    .++.+.+.++|++.+++|+.+++.++++++|+|.+         +|+||++||..+..+
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---------~g~Iv~iss~~~~~~  155 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---------GGSILTLTYYGAEKV  155 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---------CceEEEEeccccccC
Confidence            99999999999997642    46778899999999999999999999999999853         489999999998888


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      .+++..|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++. ..... ...........|++++.+|+|+|++++
T Consensus       156 ~p~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~-~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~  233 (272)
T PRK08159        156 MPHYNVMGVAKAALEASVKYLAVDLG-PKNIRVNAISAGPIKTLAA-SGIGDFRYILKWNEYNAPLRRTVTIEEVGDSAL  233 (272)
T ss_pred             CCcchhhhhHHHHHHHHHHHHHHHhc-ccCeEEEEeecCCcCCHHH-hcCCcchHHHHHHHhCCcccccCCHHHHHHHHH
Confidence            89999999999999999999999997 8899999999999987532 22211 111122223578889999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ||+++.+.++||++|.+|||+.+.
T Consensus       234 ~L~s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        234 YLLSDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             HHhCccccCccceEEEECCCceee
Confidence            999999999999999999998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-44  Score=309.96  Aligned_cols=248  Identities=26%  Similarity=0.369  Sum_probs=218.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+++||+++||||++|||++++++|+++|++|++++|+.++++...+++.+.  +.++.++.+|+++.++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888887654  34788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .++++|+||||||+....++.+.+.++|++.+++|+.+++.+++.++|.|+++.       .|+||++||..+..+.++.
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  156 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-------AASIVCVNSLLALQPEPHM  156 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-------CcEEEEeccccccCCCCCc
Confidence            999999999999987777888889999999999999999999999999998865       6899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--------chHHhHHH--HhcCCCCCCCCHHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--------PDEINSKA--RDYMPLYKLGEKWDI  237 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~dv  237 (299)
                      ..|+++|+|+.+|+++++.|+. ++||+||+|+||+++|+.....+.        .++..+..  ....|++++.+|+|+
T Consensus       157 ~~y~asKaal~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~v  235 (265)
T PRK07062        157 VATSAARAGLLNLVKSLATELA-PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEA  235 (265)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHH
Confidence            9999999999999999999997 889999999999998765332111        11111111  245688899999999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |++++||+++.+.++||+.+.+|||+..
T Consensus       236 a~~~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        236 ARALFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHHHHhCchhcccccceEEEcCceEe
Confidence            9999999999899999999999999653

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.3e-44  Score=310.17  Aligned_cols=246  Identities=30%  Similarity=0.457  Sum_probs=215.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++.+.+.++.++.+|++++++++++++++.+.+|
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999 778888888877677899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+... .++.+.+.++|++++++|+.+++.+++.++|+|++.        +|+||++||..+..+.++...
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~  153 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--------GGSIINTSSFSGQAADLYRSG  153 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------CCEEEEeCchhhcCCCCCCch
Confidence            99999999998643 567788999999999999999999999999999865        389999999999999889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chH----HhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDE----INSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|+.......  .+.    .........|.+++.+|+|+|++++|
T Consensus       154 Y~asKaal~~l~~~la~e~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  232 (272)
T PRK08589        154 YNAAKGAVINFTKSIAIEYG-RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVF  232 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999997 889999999999998764432211  111    11112234688889999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++...+++|+++.+|||....
T Consensus       233 l~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        233 LASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             HcCchhcCcCCCEEEECCCcccC
Confidence            99998999999999999997654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=9.3e-44  Score=306.35  Aligned_cols=250  Identities=28%  Similarity=0.441  Sum_probs=217.0

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ++...++||++||||+++|||++++++|+++|++|++++++..  ++..+++.+.+.++.++++|+++.++++++++++.
T Consensus         3 ~~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (253)
T PRK08993          3 LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAV   80 (253)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4455688999999999999999999999999999999887542  44455565556678899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      ++++++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|.|.++++      .|+||++||..+..+.++
T Consensus        81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  154 (253)
T PRK08993         81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN------GGKIINIASMLSFQGGIR  154 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC------CeEEEEECchhhccCCCC
Confidence            99999999999999877777888899999999999999999999999999987531      489999999999999888


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|+++|+|+++++++++.++. ++||+||+|+||+++|++.......+..........|.+++.+|+|+|+++.||++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s  233 (253)
T PRK08993        155 VPSYTASKSGVMGVTRLMANEWA-KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLAS  233 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999997 88999999999999876543222222333345567788999999999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.+.+++|+++.+|||+.+
T Consensus       234 ~~~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        234 SASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             ccccCccCcEEEECCCEec
Confidence            9999999999999999754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=4.8e-44  Score=313.27  Aligned_cols=243  Identities=26%  Similarity=0.337  Sum_probs=206.9

Q ss_pred             CCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc---------CC----cEEEEEcCC--CC
Q 022335           12 LKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL---------GI----KAVGFEGDV--RR   74 (299)
Q Consensus        12 l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~---------~~----~v~~~~~Dl--~~   74 (299)
                      |+||++|||||  ++|||+++|+.|+++|++|++ +|+.+.++++..+++..         .+    ....+.+|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            88999999999  899999999999999999998 78888888887766531         11    146788999  33


Q ss_pred             ------------------HHHHHHHHHHHHHHcCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH
Q 022335           75 ------------------QEHAKKVVESTFEHFGKLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL  134 (299)
Q Consensus        75 ------------------~~~v~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  134 (299)
                                        .++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++++++|+.+++.++++++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence                              44899999999999999999999998543  3678899999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCceEEEeccccccccCCCc-hHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCCCC
Q 022335          135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-IHVAAAKAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGMNK  212 (299)
Q Consensus       135 ~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~~~  212 (299)
                      |.|++         .|+||++||..+..+.+++ ..|++||+|+.+|+++|+.|++ + +|||||+|+||+++|++... 
T Consensus       166 p~m~~---------~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~-~~~gIrVn~V~PG~v~T~~~~~-  234 (303)
T PLN02730        166 PIMNP---------GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKYKIRVNTISAGPLGSRAAKA-  234 (303)
T ss_pred             HHHhc---------CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhC-cCCCeEEEEEeeCCccCchhhc-
Confidence            99964         4899999999998888865 5899999999999999999996 5 79999999999998765432 


Q ss_pred             CC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          213 LA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       213 ~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      .. .++.........|+.++.+|+|++.+++||+|+...+++|+.+.+|||+...
T Consensus       235 ~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~  289 (303)
T PLN02730        235 IGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAM  289 (303)
T ss_pred             ccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCcccc
Confidence            22 2233333344568788999999999999999999999999999999998764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-44  Score=308.36  Aligned_cols=248  Identities=28%  Similarity=0.422  Sum_probs=215.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..|++|++|||||++|||++++++|+++|++|++++| +++.++...+++... +.++.++++|++++++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998865 566677777777543 56789999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCC------CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           88 HFGKLDILVNAAAGNF------LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      .++++|++|||||+..      ..++.+.+.++|++.+++|+.+++.+++.++|.|++.+       .|+||++||..+.
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~  156 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-------GGSIISLSSTGNL  156 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-------CEEEEEEeccccc
Confidence            9999999999998642      24566778899999999999999999999999998765       6899999999998


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+.+++..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+|+++
T Consensus       157 ~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~  235 (260)
T PRK08416        157 VYIENYAGHGTSKAAVETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGAC  235 (260)
T ss_pred             cCCCCcccchhhHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            8889999999999999999999999997 889999999999998765332222234444555667888999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|+.+.+|||+++
T Consensus       236 ~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        236 LFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             HHHcChhhhcccCcEEEEcCCeec
Confidence            999999889999999999999765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-43  Score=304.74  Aligned_cols=254  Identities=28%  Similarity=0.442  Sum_probs=227.1

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      ||++..    +++||++|||||+++||++++++|+++|++|++++|+++++++..+.+++.+.++.++.+|+++++++++
T Consensus         1 ~~~~~~----~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~   76 (255)
T PRK07523          1 MSLNLF----DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRA   76 (255)
T ss_pred             CCcccc----CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHH
Confidence            565533    5789999999999999999999999999999999999988888888887767789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc
Q 022335           81 VVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH  160 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~  160 (299)
                      +++++.+.++++|+||||+|.....++.+.+.++|++++++|+.+++.+++++.+.|.++.       .++||++||..+
T Consensus        77 ~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~iss~~~  149 (255)
T PRK07523         77 AIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-------AGKIINIASVQS  149 (255)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-------CeEEEEEccchh
Confidence            9999999999999999999988778888899999999999999999999999999998765       689999999999


Q ss_pred             cccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          161 YTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       161 ~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      ..+.+++..|+++|++++.++++++.+++ ++||+||+|+||+++++........+...+......|.+++..|+|+|++
T Consensus       150 ~~~~~~~~~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  228 (255)
T PRK07523        150 ALARPGIAPYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGA  228 (255)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            88889999999999999999999999997 88999999999999876543322334444555667888999999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCccccC
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++||+++.+.+++|+.+.+|||+.++
T Consensus       229 ~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        229 CVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHHHcCchhcCccCcEEEECCCeecc
Confidence            99999998999999999999998754

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2e-43  Score=305.12  Aligned_cols=251  Identities=31%  Similarity=0.460  Sum_probs=221.4

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .|+...+++|++|||||++|||.+++++|+++|++|++++|+ +..+.+.+++.+.+.++.++.+|+++.++++++++++
T Consensus         7 ~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   85 (258)
T PRK06935          7 SMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEA   85 (258)
T ss_pred             ccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            344556889999999999999999999999999999999998 5667777777666778999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.+|++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.++.       .++||++||..+..+.+
T Consensus        86 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  158 (258)
T PRK06935         86 LEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-------SGKIINIASMLSFQGGK  158 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-------CeEEEEECCHHhccCCC
Confidence            99999999999999987777888889999999999999999999999999998875       68999999999998989


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|+++|+|+++++++++.|++ ++||+||+|+||+++|+........+...+......|.+++.+|+|+++++.||+
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (258)
T PRK06935        159 FVPAYTASKHGVAGLTKAFANELA-AYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLA  237 (258)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999997 8899999999999987643222222233334455678899999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++.+.+++|+++.+|||+.+
T Consensus       238 s~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        238 SRASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             ChhhcCCCCCEEEECCCeec
Confidence            99999999999999999754

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-43  Score=310.39  Aligned_cols=251  Identities=25%  Similarity=0.307  Sum_probs=214.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK---------QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .+++|++|||||++|||++++++|+++|++|++++++.         +.++.+.+++...+.++.++.+|++++++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            46799999999999999999999999999999998876         677788888877777889999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      ++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++.... .....|+||++||..+.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKA-GRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc-CCCCCcEEEEeCchhhC
Confidence            99999999999999999998777788899999999999999999999999999999864311 11124799999999999


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCC--CCCCHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLY--KLGEKWDIAM  239 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~  239 (299)
                      .+.+++..|++||+|+++|+++++.|++ ++||+||+|+|| +.|++..      ..........+.+  +..+|+|+|+
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~Pg-~~T~~~~------~~~~~~~~~~~~~~~~~~~pedva~  233 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELG-RYGVTVNAIAPA-ARTRMTE------TVFAEMMAKPEEGEFDAMAPENVSP  233 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHH-HhCeEEEEECCC-CCCCcch------hhHHHHHhcCcccccCCCCHHHHHH
Confidence            9999999999999999999999999997 889999999999 6655321      1111122222333  4579999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCccccCCCCC
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWLSRPRH  270 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~  270 (299)
                      +++||+++...+++|+++.+|||+....+.+
T Consensus       234 ~~~~L~s~~~~~itG~~i~vdgG~~~~~~~~  264 (286)
T PRK07791        234 LVVWLGSAESRDVTGKVFEVEGGKISVAEGW  264 (286)
T ss_pred             HHHHHhCchhcCCCCcEEEEcCCceEEechh
Confidence            9999999989999999999999988754444

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=2.1e-43  Score=305.00  Aligned_cols=244  Identities=25%  Similarity=0.416  Sum_probs=214.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||++++++|+++|++|++++|+....           .++.++.||++++++++++++++.++++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57799999999999999999999999999999999986431           2588899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|+|+++.       .++||++||..+..+.++...|
T Consensus        72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  144 (258)
T PRK06398         72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-------KGVIINIASVQSFAVTRNAAAY  144 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CeEEEEeCcchhccCCCCCchh
Confidence            999999999987777888899999999999999999999999999998765       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC------CchH---HhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL------APDE---INSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ++||+|+++++++++.|++ ++ |+||+|+||+++|+......      .++.   ....+....|.+++.+|+|+|+++
T Consensus       145 ~~sKaal~~~~~~la~e~~-~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~  222 (258)
T PRK06398        145 VTSKHAVLGLTRSIAVDYA-PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVV  222 (258)
T ss_pred             hhhHHHHHHHHHHHHHHhC-CC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHH
Confidence            9999999999999999996 64 99999999999876432211      1111   112234557888999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccCCCCCCchh
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKD  274 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~  274 (299)
                      +||+++...+++|+.+.+|||+....|+++|+-
T Consensus       223 ~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~  255 (258)
T PRK06398        223 AFLASDLASFITGECVTVDGGLRALIPLSTPKI  255 (258)
T ss_pred             HHHcCcccCCCCCcEEEECCccccCCCCCCCCc
Confidence            999999999999999999999999999998753

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-43  Score=305.52  Aligned_cols=241  Identities=25%  Similarity=0.276  Sum_probs=202.0

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        11 ~l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++   +.++.++.+|++++++++++++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            467999999999  89999999999999999999999864  3334444433   3367789999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           87 EHFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +.+|++|++|||||+...    .++.+.++++|++++++|+.+++.++++++|+|++         +|+||++++. +..
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---------~g~Iv~is~~-~~~  150 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---------GGSIVGLDFD-ATV  150 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---------CceEEEEeec-ccc
Confidence            999999999999998643    35677889999999999999999999999999963         4789999865 345


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCC-CCCCHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLY-KLGEKWDIAMAA  241 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~  241 (299)
                      +.+.+..|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++.......++..+.+....|++ ++.+|+|+|+++
T Consensus       151 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v  229 (256)
T PRK07889        151 AWPAYDWMGVAKAALESTNRYLARDLG-PRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAV  229 (256)
T ss_pred             cCCccchhHHHHHHHHHHHHHHHHHhh-hcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHH
Confidence            667888999999999999999999997 889999999999998764322111223333444556777 589999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|+.+.+|||+..
T Consensus       230 ~~l~s~~~~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        230 VALLSDWFPATTGEIVHVDGGAHA  253 (256)
T ss_pred             HHHhCcccccccceEEEEcCceec
Confidence            999999899999999999999764

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=5.4e-43  Score=307.84  Aligned_cols=245  Identities=30%  Similarity=0.405  Sum_probs=214.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+...+.++.++.+|+++.+++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999988653  4455666666666677889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           89 FGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      ++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+         .++||++||..+..+.++.
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---------~g~iv~iSS~~~~~~~~~~  196 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---------GASIITTSSIQAYQPSPHL  196 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---------CCEEEEECCchhccCCCCc
Confidence            999999999999753 356778899999999999999999999999999864         4789999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|+++|+|+++++++++.|++ ++||+||+|+||+++|+........++..+.+....|++++.+|+|+|++++||+++
T Consensus       197 ~~Y~asKaal~~l~~~la~el~-~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~  275 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQ  275 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHh-HhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCh
Confidence            9999999999999999999997 889999999999998765322222333444556678889999999999999999999


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      .+.+++|+.+.+|||+.+
T Consensus       276 ~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        276 ESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             hcCCccccEEeeCCCeeC
Confidence            999999999999999864

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.1e-43  Score=298.01  Aligned_cols=223  Identities=25%  Similarity=0.306  Sum_probs=201.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .++++++||||||+|||+++|++|+++|++|++++|++++++++++++.+. +.++.++++|++++++++++.+++.+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            356899999999999999999999999999999999999999999999865 5789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +.||+||||||+...+++.+.++++.++++++|+.++..++++++|.|.++.       .|+||||+|..+..|.|....
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-------~G~IiNI~S~ag~~p~p~~av  155 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-------AGHIINIGSAAGLIPTPYMAV  155 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CceEEEEechhhcCCCcchHH
Confidence            9999999999999999999999999999999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |++||+++.+|+++|+.|+. .+||+|.+++||++.|+... .-.     .......+...+.+|+++|+.++..+..
T Consensus       156 Y~ATKa~v~~fSeaL~~EL~-~~gV~V~~v~PG~~~T~f~~-~~~-----~~~~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         156 YSATKAFVLSFSEALREELK-GTGVKVTAVCPGPTRTEFFD-AKG-----SDVYLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CCCeEEEEEecCcccccccc-ccc-----cccccccchhhccCHHHHHHHHHHHHhc
Confidence            99999999999999999996 89999999999999876443 111     1111222345678999999999998843

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-43  Score=302.98  Aligned_cols=243  Identities=19%  Similarity=0.290  Sum_probs=211.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+ ++.++++|++++++++++++++.+.++++|+|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999998888888886543 68899999999999999999999999999999


Q ss_pred             EEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           96 VNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        96 v~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      |||||...  ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+...      .|+||++||..+..+.+....|+++
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~------~g~iv~isS~~~~~~~~~~~~y~~s  154 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM------KGVLVYLSSVSVKEPMPPLVLADVT  154 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC------CCEEEEEeCcccCCCCCCchHHHHH
Confidence            99999753  245677888999999999999999999999999874321      5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchH-HhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDE-INSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      |+|+.+|+++++.+++ ++||+||+|+||+++|++.....         ..++ ..+......|++++.+|+|+|+++.|
T Consensus       155 Kaa~~~~~~~la~e~~-~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~f  233 (259)
T PRK08340        155 RAGLVQLAKGVSRTYG-GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAF  233 (259)
T ss_pred             HHHHHHHHHHHHHHhC-CCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHH
Confidence            9999999999999997 88999999999999876542111         1111 12334556789999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++.++++||+++.+|||+...
T Consensus       234 L~s~~~~~itG~~i~vdgg~~~~  256 (259)
T PRK08340        234 LLSENAEYMLGSTIVFDGAMTRG  256 (259)
T ss_pred             HcCcccccccCceEeecCCcCCC
Confidence            99999999999999999998764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=9.9e-43  Score=303.94  Aligned_cols=249  Identities=33%  Similarity=0.462  Sum_probs=219.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.++.+.+++.+.+.++.++++|+++++++.++++++.+.++
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999999888888888877677899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC---------------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           91 KLDILVNAAAGNFL---------------VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        91 ~id~lv~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      ++|++|||||+...               .++.+.+.++|++.+++|+.+++.++++++|.|.+.+       .++||++
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~ii~i  159 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-------GGNIINI  159 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-------CcEEEEE
Confidence            99999999996533               2456788899999999999999999999999998865       6899999


Q ss_pred             ccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-----chHHhHHHHhcCCCCC
Q 022335          156 SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYK  230 (299)
Q Consensus       156 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~  230 (299)
                      ||..+..+.++...|++||+|++.|+++++.+++ ++||++|+|+||+++|+.......     ..+..+......|+++
T Consensus       160 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  238 (278)
T PRK08277        160 SSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFA-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGR  238 (278)
T ss_pred             ccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccC
Confidence            9999999999999999999999999999999997 889999999999998764322111     1223344456678999


Q ss_pred             CCCHHHHHHHHHHHcCC-CCCCccCcEEEeCCccccCC
Q 022335          231 LGEKWDIAMAALYLTSD-TGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       231 ~~~~~dva~~~~~l~s~-~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +.+|+|+|++++||+++ .+.++||++|.+|||+....
T Consensus       239 ~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~  276 (278)
T PRK08277        239 FGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAYS  276 (278)
T ss_pred             CCCHHHHHHHHHHHcCccccCCcCCCEEEECCCeeccc
Confidence            99999999999999999 89999999999999987643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.4e-44  Score=307.82  Aligned_cols=233  Identities=33%  Similarity=0.478  Sum_probs=209.1

Q ss_pred             cCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCccEEEE
Q 022335           21 GGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GKLDILVN   97 (299)
Q Consensus        21 Gas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g~id~lv~   97 (299)
                      |++  +|||+++|++|+++|++|++++|+.++++...+++.+..+ ..++.+|++++++++++++++.+.+ |++|+|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999999987777777765432 2259999999999999999999999 99999999


Q ss_pred             cCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           98 AAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        98 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      |+|....    .++.+.+.++|+..+++|+.+++.+++++.|+|.+         +|+||++||..+..+.+++..|+++
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~gsii~iss~~~~~~~~~~~~y~~s  150 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---------GGSIINISSIAAQRPMPGYSAYSAS  150 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---------EEEEEEEEEGGGTSBSTTTHHHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------CCCcccccchhhcccCccchhhHHH
Confidence            9998765    67788899999999999999999999999998887         4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 022335          174 KAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV  252 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  252 (299)
                      |+|+++|+++++.||+ + +|||||+|+||+++|+........++..+......|++++.+|+|||++++||+|+.+.++
T Consensus       151 Kaal~~l~r~lA~el~-~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~i  229 (241)
T PF13561_consen  151 KAALEGLTRSLAKELA-PKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYI  229 (241)
T ss_dssp             HHHHHHHHHHHHHHHG-GHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTG
T ss_pred             HHHHHHHHHHHHHHhc-cccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999998 8 9999999999999866432222245677788889999999999999999999999999999


Q ss_pred             cCcEEEeCCccc
Q 022335          253 NGTTLIVDGGLW  264 (299)
Q Consensus       253 ~G~~i~~dgg~~  264 (299)
                      |||+|.+|||++
T Consensus       230 tG~~i~vDGG~s  241 (241)
T PF13561_consen  230 TGQVIPVDGGFS  241 (241)
T ss_dssp             TSEEEEESTTGG
T ss_pred             cCCeEEECCCcC
Confidence            999999999985

...

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-43  Score=300.26  Aligned_cols=244  Identities=30%  Similarity=0.378  Sum_probs=210.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH--
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH--   88 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~--   88 (299)
                      +++|+++||||++|||++++++|+++|++|+++. ++.+..+....++...+.++..+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            5689999999999999999999999999998875 6667777777788776677888999999999999999988763  


Q ss_pred             --cC--CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 --FG--KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 --~g--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                        ++  ++|+||||||+....++.+.+.++|++++++|+.+++.++++++|.|++         .|+||++||..+..+.
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~~  152 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---------NSRIINISSAATRISL  152 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---------CCeEEEECCcccccCC
Confidence              34  8999999999876667888899999999999999999999999999964         4799999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++++++++.|++ ++||++|+|+||+++|++.......+..........+.+++.+|+|+|+++.||
T Consensus       153 ~~~~~Y~~sKaa~~~~~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  231 (252)
T PRK12747        153 PDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFL  231 (252)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHh-HcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHH
Confidence            9999999999999999999999997 889999999999998765332222222222222344778899999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++...+++|+.+.+|||+.+
T Consensus       232 ~s~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        232 ASPDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             cCccccCcCCcEEEecCCccC
Confidence            999889999999999999753

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-42  Score=299.38  Aligned_cols=247  Identities=29%  Similarity=0.406  Sum_probs=221.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.+.++...+++.+.+.++.++.+|+++.++++++++++.+.++
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            36799999999999999999999999999999999999988888888877777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|++|||+|.... .++.+.+.++|++.+++|+.+++.++++++|.|.++.       .++||++||..+..+.+++..
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~ii~~sS~~~~~~~~~~~~  156 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-------GGAIVNTASVAGLGAAPKMSI  156 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEECchhhccCCCCCch
Confidence            99999999998654 4477889999999999999999999999999998765       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |+++|+|+++|+++++.++. ++||+|++|+||+++|+....... .+..........|..+..+|+|+++.++||+++.
T Consensus       157 Y~~sKaa~~~~~~~la~e~~-~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~  235 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYA-KKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDG  235 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCcc
Confidence            99999999999999999997 889999999999998765443222 3344455566778889999999999999999999


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      ..+++|++|.+|||+++
T Consensus       236 ~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        236 ASFTTGHALMVDGGATA  252 (253)
T ss_pred             ccCcCCcEEEECCCccC
Confidence            99999999999999864

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-43  Score=301.46  Aligned_cols=245  Identities=27%  Similarity=0.359  Sum_probs=210.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|++++++++++++++.+.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999999999987777766554   45688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||||......+ +.+.++|++.+++|+.+++.+++.++|.|+ +.       .|+||++||..+..+.++...|
T Consensus        80 ~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-------~g~ii~isS~~~~~~~~~~~~Y  150 (261)
T PRK08265         80 RVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-------GGAIVNFTSISAKFAQTGRWLY  150 (261)
T ss_pred             CCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-------CcEEEEECchhhccCCCCCchh
Confidence            99999999997654433 568899999999999999999999999997 43       5899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-hHHhHHH-HhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSKA-RDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      +++|+++..++++++.|++ ++||++|+|+||+++|+........ ....+.. ....|++++.+|+|+|++++||+++.
T Consensus       151 ~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        151 PASKAAIRQLTRSMAMDLA-PDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCcc
Confidence            9999999999999999997 8899999999999987643221111 1111112 23468889999999999999999998


Q ss_pred             CCCccCcEEEeCCccccCCC
Q 022335          249 GKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~~~  268 (299)
                      ..+++|+.|.+|||+.+..|
T Consensus       230 ~~~~tG~~i~vdgg~~~~~~  249 (261)
T PRK08265        230 ASFVTGADYAVDGGYSALGP  249 (261)
T ss_pred             ccCccCcEEEECCCeeccCC
Confidence            99999999999999887543

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-42  Score=297.58  Aligned_cols=247  Identities=33%  Similarity=0.440  Sum_probs=221.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999999988888888887767778899999999999999999999999


Q ss_pred             CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|++|||+|... ..++.+.+.++|++.+++|+.+++.++++++|+|++..       .++||++||..+..+.+++.
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~  156 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-------GGSIVNVASVNGVSPGDFQG  156 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-------CcEEEEECchhhcCCCCCCc
Confidence            99999999999653 35667788999999999999999999999999998765       68999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|++||+++++++++++.++. ++||++++|+||+++|++.......+...+......|..++.+|+|+|+++.||+++.
T Consensus       157 ~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  235 (252)
T PRK07035        157 IYSITKAAVISMTKAFAKECA-PFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA  235 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCcc
Confidence            999999999999999999997 8899999999999987654443334444555666778889999999999999999999


Q ss_pred             CCCccCcEEEeCCccc
Q 022335          249 GKYVNGTTLIVDGGLW  264 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~  264 (299)
                      ..+++|+.+.+|||+.
T Consensus       236 ~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        236 SSYTTGECLNVDGGYL  251 (252)
T ss_pred             ccCccCCEEEeCCCcC
Confidence            9999999999999964

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-43  Score=308.88  Aligned_cols=270  Identities=21%  Similarity=0.228  Sum_probs=217.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh----------hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK----------QVLDAAVSALRSLGIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~----------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   79 (299)
                      ..|+||+++||||++|||+++|++|+++|++|++++|+.          +.++.+.+++...+.++.++++|++++++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            457899999999999999999999999999999999973          4566677777766667889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcC-CCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 022335           80 KVVESTFEHFGKLDILVNAA-AGNF----LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILN  154 (299)
Q Consensus        80 ~~~~~~~~~~g~id~lv~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~  154 (299)
                      ++++++.+.+|++|++|||| |+..    ..++.+.+.++|++.+++|+.+++.++++++|+|.++.       +|+||+
T Consensus        84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-------~g~IV~  156 (305)
T PRK08303         84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-------GGLVVE  156 (305)
T ss_pred             HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-------CcEEEE
Confidence            99999999999999999999 7531    25677788899999999999999999999999998764       689999


Q ss_pred             eccccccc---cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--CchHHhHHHHhcCC-C
Q 022335          155 ISATLHYT---ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDYMP-L  228 (299)
Q Consensus       155 vsS~~~~~---~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~~-~  228 (299)
                      +||..+..   +.++...|++||+|+.+|+++|+.|++ ++||+||+|+||+++|++.....  ..+.... .....| .
T Consensus       157 isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~p~~  234 (305)
T PRK08303        157 ITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELA-PHGATAVALTPGWLRSEMMLDAFGVTEENWRD-ALAKEPHF  234 (305)
T ss_pred             ECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEecCCccccHHHHHhhccCccchhh-hhcccccc
Confidence            99976543   334577899999999999999999997 88999999999999876432111  1111111 112345 4


Q ss_pred             CCCCCHHHHHHHHHHHcCCCC-CCccCcEEEeCCccccCCCCCCchhHHHHHhHhhhhccCC
Q 022335          229 YKLGEKWDIAMAALYLTSDTG-KYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRD  289 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (299)
                      ++..+|+|+|++++||+++.. .+++|++|. +....-..+..-.+...+.+|+.+++.+.-
T Consensus       235 ~~~~~peevA~~v~fL~s~~~~~~itG~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (305)
T PRK08303        235 AISETPRYVGRAVAALAADPDVARWNGQSLS-SGQLARVYGFTDLDGSRPDAWRYLVEVQDA  295 (305)
T ss_pred             ccCCCHHHHHHHHHHHHcCcchhhcCCcEEE-hHHHHHhcCccCCCCCCCcchhhhhhcccc
Confidence            667799999999999999874 589999754 333334445555677889999999776653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-42  Score=300.44  Aligned_cols=246  Identities=30%  Similarity=0.388  Sum_probs=211.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+++.++.+.+++   +.++.++++|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFG   79 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence            467999999999999999999999999999999999988777765554   44688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHH----HHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNG----FRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      ++|+||||||+... .++.+.+.++    |++++++|+.+++.++++++|.|++.        .|+||+++|..+..+.+
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~  151 (263)
T PRK06200         80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--------GGSMIFTLSNSSFYPGG  151 (263)
T ss_pred             CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--------CCEEEEECChhhcCCCC
Confidence            99999999997643 4565666655    88999999999999999999998764        48999999999999988


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-C--------CchHHhHHHHhcCCCCCCCCHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-L--------APDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                      +...|++||+|++.|+++++.+++ + +|+||+|+||+++|++.... .        ..++..+......|++++.+|+|
T Consensus       152 ~~~~Y~~sK~a~~~~~~~la~el~-~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~e  229 (263)
T PRK06200        152 GGPLYTASKHAVVGLVRQLAYELA-P-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPED  229 (263)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHh-c-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHH
Confidence            899999999999999999999996 6 59999999999987643211 0        01122344556779999999999


Q ss_pred             HHHHHHHHcCCC-CCCccCcEEEeCCccccCCCC
Q 022335          237 IAMAALYLTSDT-GKYVNGTTLIVDGGLWLSRPR  269 (299)
Q Consensus       237 va~~~~~l~s~~-~~~~~G~~i~~dgg~~~~~~~  269 (299)
                      +|++++||+++. +.+++|++|.+|||+.+..++
T Consensus       230 va~~~~fl~s~~~~~~itG~~i~vdgG~~~~~~~  263 (263)
T PRK06200        230 HTGPYVLLASRRNSRALTGVVINADGGLGIRGIR  263 (263)
T ss_pred             HhhhhhheecccccCcccceEEEEcCceeecccC
Confidence            999999999998 899999999999998876654

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.1e-42  Score=303.98  Aligned_cols=246  Identities=30%  Similarity=0.455  Sum_probs=215.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ--VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..|+||++|||||++|||+++++.|+++|++|+++.++.+  ..++..+++...+.++.++.+|+++.++++++++++.+
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999998877543  45566677776677889999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           88 HFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      .++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|.|.+         +++||++||..+..+.++
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~~~iv~~sS~~~~~~~~~  201 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---------GASIINTGSIQSYQPSPT  201 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---------CCEEEEECCccccCCCCC
Confidence            9999999999999764 356788899999999999999999999999999863         478999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||+|++.|+++++.++. ++||+||+|+||+++|+........++..+.+....|.+++.+|+|+|.+++||++
T Consensus       202 ~~~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s  280 (300)
T PRK06128        202 LLDYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLAS  280 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999997 88999999999999876532222233444455567889999999999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +...+++|+.+.+|||+.+
T Consensus       281 ~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        281 QESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             ccccCccCcEEeeCCCEeC
Confidence            9889999999999999865

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-42  Score=295.00  Aligned_cols=247  Identities=45%  Similarity=0.686  Sum_probs=218.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ||+++||||++|||+++++.|+++|++|++++|+.+.++...+++...+.++.++++|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            58999999999999999999999999999999999888888888876667899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|.....++.+.+.++|++++++|+.+++.++++++++|.+...      .++||++||..+..+.++...|++|
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~g~ii~isS~~~~~~~~~~~~Y~~s  154 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI------KGNIINMVATYAWDAGPGVIHSAAA  154 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC------CEEEEEEcChhhccCCCCCcchHHH
Confidence            9999999766667788899999999999999999999999999876431      4899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-CchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV  252 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  252 (299)
                      |+|+++|+++|+.|+.+.+||++|+|+||+++++.+.... ..++..+......+.+++.+|+|+++++.+|+++.+.++
T Consensus       155 Kaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~  234 (252)
T PRK07677        155 KAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYI  234 (252)
T ss_pred             HHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcccccc
Confidence            9999999999999996346999999999999865433222 234444555667788899999999999999999888899


Q ss_pred             cCcEEEeCCccccC
Q 022335          253 NGTTLIVDGGLWLS  266 (299)
Q Consensus       253 ~G~~i~~dgg~~~~  266 (299)
                      +|+.+.+|||+++.
T Consensus       235 ~g~~~~~~gg~~~~  248 (252)
T PRK07677        235 NGTCITMDGGQWLN  248 (252)
T ss_pred             CCCEEEECCCeecC
Confidence            99999999998874

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.7e-42  Score=295.27  Aligned_cols=241  Identities=26%  Similarity=0.361  Sum_probs=213.4

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCC-----------hhHHHHHHHHHHhcCCcEEEEEcCCCCHH
Q 022335           10 DILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRR-----------KQVLDAAVSALRSLGIKAVGFEGDVRRQE   76 (299)
Q Consensus        10 ~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   76 (299)
                      ..|+||++|||||+  +|||+++|++|+++|++|++++++           .+..++..+++.+.+.++.++++|+++.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            35789999999999  499999999999999999987532           23344566667766778999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEec
Q 022335           77 HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS  156 (299)
Q Consensus        77 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vs  156 (299)
                      +++++++++.+.+|++|++|||||.....++.+.+.++|++.+++|+.+++.+.+.++|.|.++.       .|+||++|
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~is  154 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-------GGRIINMT  154 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-------CeEEEEEc
Confidence            99999999999999999999999987777888999999999999999999999999999998765       68999999


Q ss_pred             cccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHH
Q 022335          157 ATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       157 S~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                      |..+..+.+++..|+++|+|+++|+++++.++. ++||++|+|+||+++|+..     .+...+.+....|..+..+|+|
T Consensus       155 S~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~PG~i~t~~~-----~~~~~~~~~~~~~~~~~~~~~d  228 (256)
T PRK12859        155 SGQFQGPMVGELAYAATKGAIDALTSSLAAEVA-HLGITVNAINPGPTDTGWM-----TEEIKQGLLPMFPFGRIGEPKD  228 (256)
T ss_pred             ccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEEccccCCCC-----CHHHHHHHHhcCCCCCCcCHHH
Confidence            999999999999999999999999999999997 8899999999999986532     2233444556678888999999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +|+.+.||+++.+.+++|+++.+|||+
T Consensus       229 ~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        229 AARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHHHhCccccCccCcEEEeCCCc
Confidence            999999999999999999999999995

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=294.36  Aligned_cols=249  Identities=31%  Similarity=0.506  Sum_probs=220.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++||||++|||+++++.|+++|++|++++|+ .+..+.+.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4779999999999999999999999999999998885 455666777777667788999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|...+.++.+.+.++|++.+++|+.+++.+++.++++|.+...      .++||++||..+..+.+++..
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~------~g~iv~~sS~~~~~~~~~~~~  157 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI------KGNIINMSSVHEQIPWPLFVH  157 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CcEEEEEccccccCCCCCCcc
Confidence            99999999999877777888899999999999999999999999999987541      489999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|+|+.+++++++.++. ++||+||+|+||+++|+.....+..++.........|.+++.+|+|+++++.||+++.+
T Consensus       158 Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  236 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYA-PKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEA  236 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999997 88999999999999877544334344444455567788899999999999999999999


Q ss_pred             CCccCcEEEeCCccccC
Q 022335          250 KYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~  266 (299)
                      .+++|+++.+|||+.+.
T Consensus       237 ~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        237 SYVTGITLFADGGMTLY  253 (261)
T ss_pred             CCccCcEEEECCCcccC
Confidence            99999999999998753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=8.3e-42  Score=293.13  Aligned_cols=245  Identities=33%  Similarity=0.498  Sum_probs=213.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++||++|||||++|||.+++++|+++|++|++++|+..  +...+.+...+.++.++.+|+++.+++.++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            367999999999999999999999999999999998752  445555655566799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.+++.      .++||++||..+..+.+....|
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~~~~~~Y  153 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR------GGKIINIASMLSFQGGIRVPSY  153 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC------CeEEEEEecHHhccCCCCCchh
Confidence            9999999999887777788899999999999999999999999999987531      4799999999998888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+|+++++++++.++. ++||++|+|+||+++|+...................|.+++.+|+|+|+++++|+++...
T Consensus       154 ~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (248)
T TIGR01832       154 TASKHGVAGLTKLLANEWA-AKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASD  232 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhC-ccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999997 889999999999998765432222223333445567888999999999999999999899


Q ss_pred             CccCcEEEeCCccc
Q 022335          251 YVNGTTLIVDGGLW  264 (299)
Q Consensus       251 ~~~G~~i~~dgg~~  264 (299)
                      +++|+++.+|||+.
T Consensus       233 ~~~G~~i~~dgg~~  246 (248)
T TIGR01832       233 YVNGYTLAVDGGWL  246 (248)
T ss_pred             CcCCcEEEeCCCEe
Confidence            99999999999975

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=292.90  Aligned_cols=249  Identities=32%  Similarity=0.428  Sum_probs=225.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ...++||+++||||+++||++++++|+++|++|++++|+++.++...+++++.+.++.++.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            44588999999999999999999999999999999999998888888888777778999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+.+++.|.+..       .++||++||..+..+.++..
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~~~~  158 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-------YGRIIAITSIAGQVARAGDA  158 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEeechhccCCCCcc
Confidence            99999999999987777888889999999999999999999999999998765       68999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|+++|+++.++++.++.|++ ++||++++|+||+++|+........++.........+.+++.+|+|++.++++|+++.
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  237 (256)
T PRK06124        159 VYPAAKQGLTGLMRALAAEFG-PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPA  237 (256)
T ss_pred             HhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999997 8899999999999987654333334455555666778889999999999999999999


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      +.+++|+.+.+|||+.+
T Consensus       238 ~~~~~G~~i~~dgg~~~  254 (256)
T PRK06124        238 ASYVNGHVLAVDGGYSV  254 (256)
T ss_pred             cCCcCCCEEEECCCccc
Confidence            99999999999999753

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.6e-41  Score=293.00  Aligned_cols=249  Identities=30%  Similarity=0.442  Sum_probs=224.1

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ...++||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999888888888665  5678999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.++++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|+|+++.       .++||++||..+..+.+.
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~ii~~sS~~~~~~~~~  156 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-------SSAIVNIGSVSGLTHVRS  156 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-------CceEEEECccccCCCCCC
Confidence            9999999999999987666777889999999999999999999999999998865       689999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|+++|++++.++++++.++. ++||++|+|+||+++|+........++..+......|..++.+|+|+++++.||++
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  235 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWA-EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCM  235 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999996 88999999999999877655444445555555667788899999999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +...+++|+.+.+|||...
T Consensus       236 ~~~~~~~g~~i~~~gg~~~  254 (257)
T PRK09242        236 PAASYITGQCIAVDGGFLR  254 (257)
T ss_pred             cccccccCCEEEECCCeEe
Confidence            8888999999999999754

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.8e-41  Score=292.43  Aligned_cols=245  Identities=29%  Similarity=0.412  Sum_probs=216.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||+++++.|+++|++|++++|+.+.++....++...+.++.++.+|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999999888888888877677889999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|+....++.+.+.++|++.+++|+.+++.+++.+++.|++.+.      .++||++||..+..+.++...|+++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~Y~~s  155 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH------GGKIINATSQAGVVGNPELAVYSST  155 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CCEEEEECccccccCCCCCchhHHH
Confidence            9999999877777888899999999999999999999999999987531      4799999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--------CchH-HhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--------APDE-INSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      |++++.+++.++.++. ++||+||+|+||+++|+......        .++. ....+....+.+++.+|+|+|+++.||
T Consensus       156 K~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L  234 (256)
T PRK08643        156 KFAVRGLTQTAARDLA-SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFL  234 (256)
T ss_pred             HHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999997 88999999999999876532210        0111 122344556788899999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++...+++|++|.+|||+++
T Consensus       235 ~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        235 AGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             hCccccCccCcEEEeCCCeec
Confidence            999999999999999999875

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1e-41  Score=297.78  Aligned_cols=256  Identities=29%  Similarity=0.391  Sum_probs=215.1

Q ss_pred             CCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Q 022335            4 ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus         4 ~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      +...+...+++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++.. +.++.++++|+++.++++++++
T Consensus         8 ~~~~~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~   86 (280)
T PLN02253          8 ASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVD   86 (280)
T ss_pred             hccccccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHH
Confidence            334445678899999999999999999999999999999999998777777666632 4578999999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           84 STFEHFGKLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      .+.+.++++|+||||||....  .++.+.+.++|++++++|+.+++++++++++.|.+..       .|+||+++|..+.
T Consensus        87 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~ii~isS~~~~  159 (280)
T PLN02253         87 FTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-------KGSIVSLCSVASA  159 (280)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-------CceEEEecChhhc
Confidence            999999999999999997543  4577889999999999999999999999999998765       6899999999998


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH----HhH----HHHhcCCC-CCCC
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE----INS----KARDYMPL-YKLG  232 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~----~~~----~~~~~~~~-~~~~  232 (299)
                      .+.++...|++||+|+++++++++.|++ .+||+||+|+||+++|+......+.+.    ...    ......++ ++..
T Consensus       160 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  238 (280)
T PLN02253        160 IGGLGPHAYTGSKHAVLGLTRSVAAELG-KHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVEL  238 (280)
T ss_pred             ccCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCC
Confidence            8888888999999999999999999997 889999999999998765332222211    111    11112222 4567


Q ss_pred             CHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCC
Q 022335          233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       233 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      +|+|+|++++||+++...+++|+++.+|||+...++
T Consensus       239 ~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        239 TVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             CHHHHHHHHHhhcCcccccccCcEEEECCchhhccc
Confidence            999999999999999999999999999999877554

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-41  Score=293.00  Aligned_cols=249  Identities=33%  Similarity=0.497  Sum_probs=221.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ...+++|+++||||+++||++++++|+++|++|++++|+.+.+++..++++..+.++.++++|+++.++++++++++.+.
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            44678999999999999999999999999999999999999888888888777778999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|+||||+|+....++.+.+.++|++++++|+.+++.+++.++|+|++..       .++||++||..+..+.+...
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~  157 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-------HGKIINICSMMSELGRETVS  157 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcCccccCCCCCCc
Confidence            99999999999988777888899999999999999999999999999998765       68999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC------CchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL------APDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      .|+++|+|++.++++++.++. ++||+||+|+||+++|+......      .............|..++.+|+|+|.+++
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  236 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAV  236 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhh-hcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHH
Confidence            999999999999999999997 88999999999999876432211      11122233445667888999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCcccc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|+++.+++++|+.+.+|||...
T Consensus       237 ~l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        237 FLASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             HHhCcccCCCCCCEEEECCCcee
Confidence            99999889999999999999654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=5.4e-41  Score=289.41  Aligned_cols=244  Identities=33%  Similarity=0.503  Sum_probs=217.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|+++.++++++++.+.+.++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47799999999999999999999999999999999999888888888877677889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|+....++ +.+.++|++.+++|+.+++.+++++.|+|.+..       .++||++||..+..+.++...|
T Consensus        88 ~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y  159 (255)
T PRK06113         88 KVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-------GGVILTITSMAAENKNINMTSY  159 (255)
T ss_pred             CCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-------CcEEEEEecccccCCCCCcchh
Confidence            99999999998655554 678899999999999999999999999998754       5799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+|+++++++++.++. ++||++|+|+||+++|+...... .++.........+..++.+|+|+++++.||+++...
T Consensus       160 ~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  237 (255)
T PRK06113        160 ASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS  237 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hhCeEEEEEeccccccccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999997 88999999999999876543322 333444456667888899999999999999999999


Q ss_pred             CccCcEEEeCCccc
Q 022335          251 YVNGTTLIVDGGLW  264 (299)
Q Consensus       251 ~~~G~~i~~dgg~~  264 (299)
                      +++|++|.+|||..
T Consensus       238 ~~~G~~i~~~gg~~  251 (255)
T PRK06113        238 WVSGQILTVSGGGV  251 (255)
T ss_pred             CccCCEEEECCCcc
Confidence            99999999999943

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-41  Score=289.60  Aligned_cols=246  Identities=29%  Similarity=0.446  Sum_probs=218.4

Q ss_pred             CCCCCCEEEEecCCC-hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cC-CcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGS-GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LG-IKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        10 ~~l~~k~vlItGas~-giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ..+++|+++||||+| |||+++++.|+++|++|++++|+.+.++...+++++ .+ .++.++++|++++++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            467799999999985 999999999999999999999999888888887765 33 468899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.+|++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.....      .++||+++|..+..+.++
T Consensus        93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~g~iv~~ss~~~~~~~~~  166 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH------GGVIVNNASVLGWRAQHG  166 (262)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CcEEEEeCchhhcCCCCC
Confidence            99999999999999877778888999999999999999999999999999987531      489999999999888889


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|+++|+|+++++++++.|++ ++||+||+|+||+++|+.... ...++..+......++++..+|+|+|++++||++
T Consensus       167 ~~~Y~~sKaal~~~~~~la~e~~-~~gI~v~~i~Pg~~~t~~~~~-~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s  244 (262)
T PRK07831        167 QAHYAAAKAGVMALTRCSALEAA-EYGVRINAVAPSIAMHPFLAK-VTSAELLDELAAREAFGRAAEPWEVANVIAFLAS  244 (262)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccCccccc-ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999997 889999999999998765432 2334444555567788999999999999999999


Q ss_pred             CCCCCccCcEEEeCCcc
Q 022335          247 DTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~  263 (299)
                      +.+.+++|+++.+|+++
T Consensus       245 ~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        245 DYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             chhcCcCCceEEeCCCC
Confidence            99999999999999965

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.6e-42  Score=291.90  Aligned_cols=198  Identities=33%  Similarity=0.456  Sum_probs=181.7

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-C-cEEEEEcCCCCHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-I-KAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~-~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .++..+.||+|+|||||+|||.++|.+|+++|++++++.|+..+++.+.+++++.. . ++.+++||+++.+++++++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            45667899999999999999999999999999999999999999999989998763 3 499999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +..+||++|+||||||+.......+.+.++++..|++|+.|++.++++++|.|++++       .|+||+|||+.|..+.
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-------~GhIVvisSiaG~~~~  157 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-------DGHIVVISSIAGKMPL  157 (282)
T ss_pred             HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-------CCeEEEEeccccccCC
Confidence            999999999999999998866777888999999999999999999999999999987       6999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEeCCccCCCCCCCCC
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYD--IRVNGIAPGPIGDTPGMNKL  213 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~g--i~v~~i~pG~v~t~~~~~~~  213 (299)
                      |....|++||+|+.+|+++|+.|+. .++  |++ .|+||+|+|+......
T Consensus       158 P~~~~Y~ASK~Al~~f~etLR~El~-~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  158 PFRSIYSASKHALEGFFETLRQELI-PLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             CcccccchHHHHHHHHHHHHHHHhh-ccCceEEE-EEecCceeecccchhh
Confidence            9999999999999999999999996 766  566 9999999887554444

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9e-42  Score=298.87  Aligned_cols=247  Identities=26%  Similarity=0.323  Sum_probs=195.7

Q ss_pred             cCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH----------hcCC-------------
Q 022335            9 ADILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR----------SLGI-------------   63 (299)
Q Consensus         9 ~~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~----------~~~~-------------   63 (299)
                      +..+.||++||||++  +|||+++|+.|+++|++|++.++.+ .++...+...          ..+.             
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            346789999999996  9999999999999999999987542 1111111000          0000             


Q ss_pred             --cEEEEEcCCCC--------HHHHHHHHHHHHHHcCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHH
Q 022335           64 --KAVGFEGDVRR--------QEHAKKVVESTFEHFGKLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCH  131 (299)
Q Consensus        64 --~v~~~~~Dl~~--------~~~v~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~  131 (299)
                        +..-+.+|+++        .++++++++++.+++|++|+||||||...  ..++.+.+.++|++.+++|+.+++++++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence              11222222222        34689999999999999999999998653  4678899999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch-HHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCC
Q 022335          132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI-HVAAAKAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPG  209 (299)
Q Consensus       132 ~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~  209 (299)
                      +++|+|++         .|+||+++|..+..+.+++. .|++||+|+++|+++++.|++ + +|||||+|+||+++|++.
T Consensus       162 a~~p~m~~---------~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~-~~~gIrVn~V~PG~v~T~~~  231 (299)
T PRK06300        162 HFGPIMNP---------GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAG-RRWGIRVNTISAGPLASRAG  231 (299)
T ss_pred             HHHHHhhc---------CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEEeCCccChhh
Confidence            99999964         47899999999988888764 899999999999999999997 6 599999999999987643


Q ss_pred             CCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          210 MNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ......++..+......|.++..+|+|++.+++||+|+...+++|+++.+|||+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  288 (299)
T PRK06300        232 KAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVM  288 (299)
T ss_pred             hcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccee
Confidence            221112233334445678889999999999999999999999999999999998774

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-41  Score=290.00  Aligned_cols=244  Identities=26%  Similarity=0.363  Sum_probs=213.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++|||+++|||+++++.|+++|++|++++|+.++++...+++... +.++.++.+|++++++++++++.    +
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~   79 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----A   79 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----h
Confidence            367999999999999999999999999999999999998888888888654 55788999999999999888753    5


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|+....++.+.+.++|+.++++|+.++++++++++|.|.++.       .++||++||..+..+.+.+..
T Consensus        80 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~iss~~~~~~~~~~~~  152 (259)
T PRK06125         80 GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-------SGVIVNVIGAAGENPDADYIC  152 (259)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CcEEEEecCccccCCCCCchH
Confidence            8999999999987777888999999999999999999999999999998865       589999999999988888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--------CCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--------LAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      |+++|+|+++|+++++.|+. ++||+||+|+||+++|+.....        ...++....+....|.+++.+|+|+|+++
T Consensus       153 y~ask~al~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  231 (259)
T PRK06125        153 GSAGNAALMAFTRALGGKSL-DDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV  231 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence            99999999999999999996 8899999999999987642211        11233333445567888999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +||+++...+++|+.+.+|||+.+.
T Consensus       232 ~~l~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        232 AFLASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             HHHcCchhccccCceEEecCCeeec
Confidence            9999998999999999999997753

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-41  Score=287.74  Aligned_cols=244  Identities=35%  Similarity=0.553  Sum_probs=213.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++++|++|||||+++||.+++++|+++|++|++++|+... .....++.  +.++.++.+|++++++++++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999999998763 33333332  3457789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.+.|.++.       .++||++||..+..+.+....
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~  160 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-------GGKIVNLASQAGVVALERHVA  160 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-------CceEEEEcchhhccCCCCCch
Confidence            9999999999987767777888999999999999999999999999998865       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|+|+++++++++.+++ ++||++|+|+||+++++...... ............|.+++.+|+|+|+++++|+++.+
T Consensus       161 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  238 (255)
T PRK06841        161 YCASKAGVVGMTKVLALEWG-PYGITVNAISPTVVLTELGKKAW-AGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAA  238 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCcCcCccccccc-chhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999997 88999999999999876543222 22223344566788899999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+.+|||+.+
T Consensus       239 ~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        239 AMITGENLVIDGGYTI  254 (255)
T ss_pred             cCccCCEEEECCCccC
Confidence            9999999999999865

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-40  Score=287.51  Aligned_cols=251  Identities=27%  Similarity=0.414  Sum_probs=220.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +|++|||||++|||++++++|+++|++|+++.+ +.+.++...++++..+.++.++.+|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988864 5666777788887777889999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |++|||+|.....++.+.+.++|++.+++|+.+++.+++++.++|.+++.      .++||++||..+..+.++...|++
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~g~ii~isS~~~~~~~~~~~~Y~~  155 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ------GGRIINITSVHEHTPLPGASAYTA  155 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CeEEEEEeeccccCCCCCcchhHH
Confidence            99999999877677788899999999999999999999999999976531      489999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV  252 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  252 (299)
                      +|+++++++++++.++. ++||++++|+||+++|+... . ...+.........+..+..+|+|+++++.||+++...++
T Consensus       156 sK~a~~~l~~~la~~~~-~~~i~v~~v~Pg~~~t~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  232 (256)
T PRK12743        156 AKHALGGLTKAMALELV-EHGILVNAVAPGAIATPMNG-M-DDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYT  232 (256)
T ss_pred             HHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCcccc-c-cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCc
Confidence            99999999999999997 88999999999999865432 2 223333445566788889999999999999999989999


Q ss_pred             cCcEEEeCCccccCCCCCCch
Q 022335          253 NGTTLIVDGGLWLSRPRHLPK  273 (299)
Q Consensus       253 ~G~~i~~dgg~~~~~~~~~~~  273 (299)
                      +|+.+.+|||+.+..|-+..+
T Consensus       233 ~G~~~~~dgg~~~~~~~~~~~  253 (256)
T PRK12743        233 TGQSLIVDGGFMLANPQFNSE  253 (256)
T ss_pred             CCcEEEECCCccccCCccccc
Confidence            999999999988766554443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.5e-41  Score=289.36  Aligned_cols=242  Identities=32%  Similarity=0.466  Sum_probs=206.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||++++++|+++|++|+++.++.+..   .+++...  ++.++.+|++++++++++++++.+.++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            36799999999999999999999999999999887665322   2233322  478899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-cCCCchH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-ASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~~  169 (299)
                      ++|+||||+|+....++.+.+.++|++.+++|+.+++.+++.++|.|+++.       .++||++||..+.. +.++...
T Consensus        79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-------~g~iv~isS~~~~~~~~~~~~~  151 (255)
T PRK06463         79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-------NGAIVNIASNAGIGTAAEGTTF  151 (255)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcCHHhCCCCCCCccH
Confidence            999999999987667788889999999999999999999999999998765       68999999998875 4567789


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch---HHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD---EINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      |++||+|+++|+++++.|+. ++||+||+|+||+++|+........+   ...+......+.+++.+|+|+|+.+++|++
T Consensus       152 Y~asKaa~~~~~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  230 (255)
T PRK06463        152 YAITKAGIIILTRRLAFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLAS  230 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcC
Confidence            99999999999999999997 88999999999999876543222221   233445566788899999999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.+.+++|+.+.+|||..-
T Consensus       231 ~~~~~~~G~~~~~dgg~~~  249 (255)
T PRK06463        231 DDARYITGQVIVADGGRID  249 (255)
T ss_pred             hhhcCCCCCEEEECCCeee
Confidence            9899999999999999753

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-41  Score=287.89  Aligned_cols=239  Identities=32%  Similarity=0.438  Sum_probs=210.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.        ...+.++.++.+|++++++++++++.+.+.++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999998754        12345688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++.+++++.+.|.++..      .++||++||..+..+.++...|
T Consensus        75 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~g~ii~isS~~~~~~~~~~~~Y  148 (252)
T PRK07856         75 RLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG------GGSIVNIGSVSGRRPSPGTAAY  148 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CcEEEEEcccccCCCCCCCchh
Confidence            9999999999877677788899999999999999999999999999987431      4899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+++++|+++++.|++ ++ |++|+|+||+++|+........++.........|.+++.+|+|+|++++||+++...
T Consensus       149 ~~sK~a~~~l~~~la~e~~-~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~  226 (252)
T PRK07856        149 GAAKAGLLNLTRSLAVEWA-PK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLAS  226 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccC
Confidence            9999999999999999996 66 999999999998765433233334444455667888999999999999999999889


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|+.|.+|||...
T Consensus       227 ~i~G~~i~vdgg~~~  241 (252)
T PRK07856        227 YVSGANLEVHGGGER  241 (252)
T ss_pred             CccCCEEEECCCcch
Confidence            999999999999765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1e-40  Score=288.02  Aligned_cols=245  Identities=31%  Similarity=0.438  Sum_probs=215.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.+|++|||||+++||+++++.|+++|++|++++|+.+..+.+.+++   +.++.++.+|++++++++++++++.+.++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999998777766655   34688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.++..      +++||++||..+..+.++...|
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~Y  153 (257)
T PRK07067         80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR------GGKIINMASQAGRRGEALVSHY  153 (257)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC------CcEEEEeCCHHhCCCCCCCchh
Confidence            9999999999877778888899999999999999999999999999987531      4799999999988898999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ++||+++..++++++.++. ++||++|+|.||+++++.....         ....+.........|++++.+|+|+|+++
T Consensus       154 ~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  232 (257)
T PRK07067        154 CATKAAVISYTQSAALALI-RHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMA  232 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhc-ccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHH
Confidence            9999999999999999997 8899999999999987643211         11223334455677899999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|+++++|||..+
T Consensus       233 ~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        233 LFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHhCcccccccCcEEeecCCEeC
Confidence            999999999999999999999765

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-40  Score=287.43  Aligned_cols=247  Identities=29%  Similarity=0.414  Sum_probs=214.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||++++++|+++|++|++++|+.. .++..+++...+.++.++.+|++++++++++++++.++++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999875 4455555655566788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-cccCCCchH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-YTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~~~  169 (299)
                      ++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.++++|.+..       .++||++||..+ ..+.+++..
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~~  154 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-------DGRIVMMSSVTGDMVADPGETA  154 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-------CcEEEEECcHHhcccCCCCcch
Confidence            999999999987777888889999999999999999999999999998765       579999999887 456678899


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC------CCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK------LAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      |+++|+++++++++++.++. ++||+|++|+||+++|++....      ...+..........|.+++.+|+|+|+.+.|
T Consensus       155 Y~~sK~a~~~~~~~la~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~  233 (263)
T PRK08226        155 YALTKAAIVGLTKSLAVEYA-QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAF  233 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999996 8899999999999987643211      1123344455566788899999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++.+.+++|+++.+|||..+.
T Consensus       234 l~~~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        234 LASDESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             HcCchhcCCcCceEeECCCcccC
Confidence            99998899999999999997653

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=287.09  Aligned_cols=242  Identities=28%  Similarity=0.450  Sum_probs=207.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|++. .+...+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999853 4556666766667788999999999999999999999999


Q ss_pred             CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++       .++||++||..+..  .....
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~--~~~~~  154 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-------GGAIVNVSSIATRG--INRVP  154 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCeEEEEcCccccC--CCCCc
Confidence            9999999999653 46778889999999999999999999999999998865       58999999987642  34568


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC--C---CC------chHHhHHHHhcCCCCCCCCHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN--K---LA------PDEINSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~--~---~~------~~~~~~~~~~~~~~~~~~~~~dva  238 (299)
                      |++||+|++.|+++++.+++ ++||++|+|+||+++|++...  .   ..      .++.........|++++.+|+|+|
T Consensus       155 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  233 (260)
T PRK12823        155 YSAAKGGVNALTASLAFEYA-EHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQV  233 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHH
Confidence            99999999999999999997 889999999999998764210  0   00      112233344567888999999999


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ++++||+++.+.+++|+.+++|||.
T Consensus       234 ~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        234 AAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHcCcccccccCcEEeecCCC
Confidence            9999999998899999999999986

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-41  Score=291.54  Aligned_cols=234  Identities=25%  Similarity=0.332  Sum_probs=199.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..+++...+.++.++++|++++++++++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            689999998 699999999996 8999999999998888888888766668899999999999999999988 5689999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---------  164 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---------  164 (299)
                      +||||||+..       ..++|++++++|+.++++++++++|.|.+         ++++|+++|..+..+.         
T Consensus        79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---------~g~iv~isS~~~~~~~~~~~~~~~~  142 (275)
T PRK06940         79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP---------GGAGVVIASQSGHRLPALTAEQERA  142 (275)
T ss_pred             EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---------CCCEEEEEecccccCcccchhhhcc
Confidence            9999999742       23679999999999999999999999964         3678999998876542         


Q ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHH
Q 022335          165 ---------------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSK  221 (299)
Q Consensus       165 ---------------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~  221 (299)
                                           +++..|++||+|+..++++++.+++ ++||+||+|+||+++|+.......  .++..+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~  221 (275)
T PRK06940        143 LATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG-ERGARINSISPGIISTPLAQDELNGPRGDGYRN  221 (275)
T ss_pred             ccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc-cCCeEEEEeccCcCcCccchhhhcCCchHHHHH
Confidence                                 2467899999999999999999997 889999999999998775432221  1222334


Q ss_pred             HHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          222 ARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       222 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      .....|++++.+|+|+|++++||+|+...+++|+.+.+|||+....
T Consensus       222 ~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~~  267 (275)
T PRK06940        222 MFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATASY  267 (275)
T ss_pred             HhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEEE
Confidence            4456788999999999999999999999999999999999987643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=5.3e-41  Score=290.61  Aligned_cols=242  Identities=29%  Similarity=0.415  Sum_probs=203.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.   .+.++.++.+|+++.+++.++++++.+.+++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            5699999999999999999999999999999999998766665432   2456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCCH----HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           92 LDILVNAAAGNFL-VSAEDLSP----NGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        92 id~lv~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +|+||||||+... .++.+.+.    ++|++.+++|+.+++.++++++|.|.+.        +|+||+++|..+..+.++
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~  151 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--------RGSVIFTISNAGFYPNGG  151 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--------CCCEEEEeccceecCCCC
Confidence            9999999997532 34444443    5799999999999999999999999764        378999999999988888


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-C--Cc-----hHHhHHHHhcCCCCCCCCHHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-L--AP-----DEINSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-~--~~-----~~~~~~~~~~~~~~~~~~~~dva  238 (299)
                      ...|++||+|+++|+++++.+++ ++ |+||+|+||+++|++.... .  ..     ....+......|++++.+|+|+|
T Consensus       152 ~~~Y~~sKaa~~~l~~~la~e~~-~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva  229 (262)
T TIGR03325       152 GPLYTAAKHAVVGLVKELAFELA-PY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYT  229 (262)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhc-cC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhh
Confidence            89999999999999999999997 75 9999999999987653321 1  11     01223334567899999999999


Q ss_pred             HHHHHHcCCC-CCCccCcEEEeCCccccC
Q 022335          239 MAALYLTSDT-GKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       239 ~~~~~l~s~~-~~~~~G~~i~~dgg~~~~  266 (299)
                      ++++||+++. ..+++|++|.+|||+.+.
T Consensus       230 ~~~~~l~s~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       230 GAYVFFATRGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             hheeeeecCCCcccccceEEEecCCeeec
Confidence            9999999974 578999999999998764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.9e-41  Score=281.96  Aligned_cols=222  Identities=23%  Similarity=0.267  Sum_probs=200.4

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      |.+..+.+|++||||||++|+|+++|.+|+++|+++++.|.|.+..+++.+++++.| +++.+.||+++.+++.++.+++
T Consensus        30 ~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   30 PKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             ccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHH
Confidence            446678899999999999999999999999999999999999999999999998874 8999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      ++++|.+|+||||||+....++.+.+.+++++++++|+.|++.++++|+|.|.+.+       +|+||.|+|.+|..+.+
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-------~GHIV~IaS~aG~~g~~  181 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-------NGHIVTIASVAGLFGPA  181 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-------CceEEEehhhhcccCCc
Confidence            99999999999999999999999999999999999999999999999999999988       89999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWG--ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~--~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      +..+|++||+|+.+|.++|+.|+.  ...||++..++|++++|.+.....+.          ..+....+|+.+|+.++.
T Consensus       182 gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~----------~~l~P~L~p~~va~~Iv~  251 (300)
T KOG1201|consen  182 GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPF----------PTLAPLLEPEYVAKRIVE  251 (300)
T ss_pred             cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCC----------ccccCCCCHHHHHHHHHH
Confidence            999999999999999999999985  24579999999999986554431111          122345789999999877


Q ss_pred             Hc
Q 022335          244 LT  245 (299)
Q Consensus       244 l~  245 (299)
                      -.
T Consensus       252 ai  253 (300)
T KOG1201|consen  252 AI  253 (300)
T ss_pred             HH
Confidence            55

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-40  Score=285.05  Aligned_cols=247  Identities=42%  Similarity=0.649  Sum_probs=217.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+.++...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35779999999999999999999999999999999999988888777777666678899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|.|+++        +|+||++||..+..+.++...
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--------~g~iv~iss~~~~~~~~~~~~  156 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--------GASIIQISAPQAFVPMPMQAH  156 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--------CCEEEEECChhhccCCCCccH
Confidence            999999999997766777888999999999999999999999999999754        479999999999888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCC-CCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP-GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |+++|+|+++|+++++.++. .+||++++|+||+++++. .....+.+..........|+++..+|+|+|+.+.+|+++.
T Consensus       157 Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        157 VCAAKAGVDMLTRTLALEWG-PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDM  235 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence            99999999999999999996 889999999999997443 2222333344344445578888999999999999999988


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      ..+++|+.+.+|||+.+
T Consensus       236 ~~~~~G~~~~~~gg~~~  252 (264)
T PRK07576        236 ASYITGVVLPVDGGWSL  252 (264)
T ss_pred             hcCccCCEEEECCCccc
Confidence            88999999999999864

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4e-43  Score=270.77  Aligned_cols=241  Identities=27%  Similarity=0.349  Sum_probs=218.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|.|+.+++||+.-|||++++..|++.|++|+.++|++..+..+..+..   .-+..+..|++..+.+.+.+..    .+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~----v~   76 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVP----VF   76 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhcc----cC
Confidence            5789999999999999999999999999999999999988887766553   3478889999997776665543    47


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      .+|.+|||||+....++.+++.++|+.+|++|+.+.+.+.|....-+..+..      .|.||++||..+.++..+...|
T Consensus        77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~------~GaIVNvSSqas~R~~~nHtvY  150 (245)
T KOG1207|consen   77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI------KGAIVNVSSQASIRPLDNHTVY  150 (245)
T ss_pred             chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC------CceEEEecchhcccccCCceEE
Confidence            8999999999998899999999999999999999999999997766655432      5889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      |++|+|+++++++|+.|++ +++||||++.|-.+-|.+....-.++.....+.+..|++++...++|.+++.||+|+.+.
T Consensus       151 catKaALDmlTk~lAlELG-p~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  151 CATKAALDMLTKCLALELG-PQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSS  229 (245)
T ss_pred             eecHHHHHHHHHHHHHhhC-cceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcC
Confidence            9999999999999999998 999999999999998888877777777788889999999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      ..+|.++.++||+|.
T Consensus       230 mttGstlpveGGfs~  244 (245)
T KOG1207|consen  230 MTTGSTLPVEGGFSN  244 (245)
T ss_pred             cccCceeeecCCccC
Confidence            999999999999985

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1e-40  Score=289.33  Aligned_cols=238  Identities=30%  Similarity=0.387  Sum_probs=204.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++++....+         ..++.++.+|++++++++++++++.+.++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            577999999999999999999999999999999999875422         23578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCC---------CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           91 KLDILVNAAAGNFLV---------SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        91 ~id~lv~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      ++|++|||||+....         ++.+.+.++|++++++|+.+++.+++++.++|.++.       .++||++||..+.
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~  149 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-------DGVIVNMSSEAGL  149 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-------CcEEEEEcccccc
Confidence            999999999975432         234578899999999999999999999999998765       6899999999999


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-----------CchHHhHHHHh--cCCC
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-----------APDEINSKARD--YMPL  228 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-----------~~~~~~~~~~~--~~~~  228 (299)
                      .+.++...|+++|+|+++|+++++.+++ ++||++|+|+||+++++.+....           ..++..+.+..  ..|+
T Consensus       150 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  228 (266)
T PRK06171        150 EGSEGQSCYAATKAALNSFTRSWAKELG-KHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL  228 (266)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC
Confidence            9999999999999999999999999997 88999999999999644332110           11222333333  6788


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++.+|+|+|+++.||+|+.+.++||++|.+|||+..
T Consensus       229 ~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        229 GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             CCCCCHHHhhhheeeeeccccccceeeEEEecCcccC
Confidence            9999999999999999999999999999999999753

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.9e-40  Score=311.59  Aligned_cols=242  Identities=30%  Similarity=0.440  Sum_probs=212.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.||++|||||++|||+++|++|+++|++|++++|+++.++.+.+++   +.++..+.+|++++++++++++++.+.+|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999999999999988877776554   45678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+... .++.+.+.++|++++++|+.++++++++++|+|.  .       .|+||++||..+..+.++...
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~-------~g~iv~isS~~~~~~~~~~~~  413 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--Q-------GGVIVNLGSIASLLALPPRNA  413 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--c-------CCEEEEECchhhcCCCCCCch
Confidence            99999999998643 5777889999999999999999999999999992  2       589999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++...... .....+......|.+++.+|+|+|++++||+++.
T Consensus       414 Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~  492 (520)
T PRK06484        414 YCASKAAVTMLSRSLACEWA-PAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPA  492 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999997 889999999999998765332211 1222344456678889999999999999999998


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      ..+++|+.+.+|||+..
T Consensus       493 ~~~~~G~~i~vdgg~~~  509 (520)
T PRK06484        493 ASYVNGATLTVDGGWTA  509 (520)
T ss_pred             ccCccCcEEEECCCccC
Confidence            89999999999999754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-39  Score=280.28  Aligned_cols=247  Identities=31%  Similarity=0.450  Sum_probs=217.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      |.+++++||||+++||++++++|+++|++|++ .+|+.+..+++.++++..+.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999999999876 57888888888888877777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||+|.....++.+.+.++|+..+++|+.+++.++++++++|.+++       .++||++||..+..+.+....|
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~y  154 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-------GGKIISLSSLGSIRYLENYTTV  154 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CeEEEEEcchhhccCCCCccHH
Confidence            999999999987777888899999999999999999999999999998765       6899999999888888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|++++.|+++++.++. +.||++++|+||++.++...................+.+++.+++|+|+.+.+++++...
T Consensus       155 ~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  233 (250)
T PRK08063        155 GVSKAALEALTRYLAVELA-PKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEAD  233 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHh-HhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999996 889999999999997654322222233334445566777889999999999999998888


Q ss_pred             CccCcEEEeCCccccC
Q 022335          251 YVNGTTLIVDGGLWLS  266 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~~  266 (299)
                      +++|+.+.+|||..+.
T Consensus       234 ~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        234 MIRGQTIIVDGGRSLL  249 (250)
T ss_pred             CccCCEEEECCCeeee
Confidence            9999999999998753

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.1e-39  Score=277.92  Aligned_cols=244  Identities=24%  Similarity=0.380  Sum_probs=214.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      |++|+++||||++|||++++++|+++|++|++. +++....+...+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999998885 4556666666777766677888999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||+|.....++.+.+.++|++++++|+.+++.+++++++.|.++.       .++||++||..+..+.+++..|
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~y  153 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-------WGRIINISSVNGQKGQFGQTNY  153 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CeEEEEEechhccCCCCCChhH
Confidence            999999999987666788889999999999999999999999999998765       5899999999999898999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|++++.++++++.++. ++||++++|+||+++|+... ... ++..+......+..++.+++|+++++.||+++...
T Consensus       154 ~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~~~t~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~  230 (246)
T PRK12938        154 STAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVK-AIR-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESG  230 (246)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecccCCchhh-hcC-hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccC
Confidence            9999999999999999997 88999999999999865432 222 33334444567788899999999999999999889


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|+.+.+|||+.+
T Consensus       231 ~~~g~~~~~~~g~~~  245 (246)
T PRK12938        231 FSTGADFSLNGGLHM  245 (246)
T ss_pred             CccCcEEEECCcccC
Confidence            999999999999754

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-39  Score=279.00  Aligned_cols=242  Identities=31%  Similarity=0.467  Sum_probs=206.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|++|||||++|||+++++.|+++|++|+++.+ +.+..+.+..++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999988765 444444444333   3568899999999999999999999999


Q ss_pred             CC-ccEEEEcCCCCC------CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           90 GK-LDILVNAAAGNF------LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        90 g~-id~lv~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      ++ +|++|||||+..      ..++.+.+.++|++.+++|+.+++.+++++++.|.+..       .++||+++|..+..
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~iss~~~~~  151 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-------FGRIINIGTNLFQN  151 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-------CeEEEEECCccccC
Confidence            87 999999998632      24577888999999999999999999999999998765       58999999988777


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +...+..|++||+|+++++++++.+++ ++||++|+|+||+++|+..... ..++.........|.+++.+|+|+|+++.
T Consensus       152 ~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~  229 (253)
T PRK08642        152 PVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVNMVSGGLLRTTDASAA-TPDEVFDLIAATTPLRKVTTPQEFADAVL  229 (253)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeecccCCchhhcc-CCHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence            777788999999999999999999997 8899999999999987644332 23444455566778899999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      ||+++.+.+++|+.|.+|||+.
T Consensus       230 ~l~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        230 FFASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             HHcCchhcCccCCEEEeCCCee
Confidence            9999988999999999999964

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=281.27  Aligned_cols=246  Identities=28%  Similarity=0.421  Sum_probs=216.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|+++||||++|||++++++|+++|++|++++|+++.++.+.+++...+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999999888888888876677899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.+.|.+.        .++||++||..+..+.+++..
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~  153 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--------GGSIVMINSMVLRHSQPKYGA  153 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--------CCEEEEEechhhccCCCCcch
Confidence            99999999997544 677788899999999999999999999999999765        369999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      |+++|++++.++++++.+++ ++||++++|+||++.++.....         ...++.........+..++.+|+|++++
T Consensus       154 Y~~sK~a~~~l~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a  232 (258)
T PRK07890        154 YKMAKGALLAASQSLATELG-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASA  232 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHH
Confidence            99999999999999999997 8899999999999987643211         1223334444556788889999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCcccc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.+++++...+++|+++.+|||+..
T Consensus       233 ~~~l~~~~~~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        233 VLFLASDLARAITGQTLDVNCGEYH  257 (258)
T ss_pred             HHHHcCHhhhCccCcEEEeCCcccc
Confidence            9999998888999999999999753

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-39  Score=278.55  Aligned_cols=250  Identities=33%  Similarity=0.457  Sum_probs=219.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++++++|||||++|||.+++++|+++|++|++++|+.+.++++.+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999988888888887666778999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||......+.+.+.+++++.+++|+.+++.+.+++.+.|.+...      .++||++||..+..+.++...
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~~~~~~  159 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG------GGSVINISSTMGRLAGRGFAA  159 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC------CeEEEEEccccccCCCCCCch
Confidence            99999999999876677788899999999999999999999999999987421      589999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.++++++.++. + +|++++|+||+++|+...................+..+..+|+|+|++++|++++..
T Consensus       160 Y~~sK~a~~~~~~~~~~e~~-~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  237 (263)
T PRK07814        160 YGTAKAALAHYTRLAALDLC-P-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAG  237 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHC-C-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999996 6 699999999999866433222233444444555677788999999999999999988


Q ss_pred             CCccCcEEEeCCccccCC
Q 022335          250 KYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~~  267 (299)
                      .+++|+.+.+|||....+
T Consensus       238 ~~~~g~~~~~~~~~~~~~  255 (263)
T PRK07814        238 SYLTGKTLEVDGGLTFPN  255 (263)
T ss_pred             cCcCCCEEEECCCccCCC
Confidence            999999999999987744

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=279.77  Aligned_cols=245  Identities=24%  Similarity=0.345  Sum_probs=215.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +|++|||||+++||.+++++|+++|++|++++|+...++...+++....  .++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            7899999999999999999999999999999999888888877776542  46899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|++|||||.....++.+.+.++|++.+++|+.+++++.+++++.|.++..      .++||++||..+..+.+....|+
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~~iv~~ss~~~~~~~~~~~~Y~  155 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI------QGRIIQINSKSGKVGSKHNSGYS  155 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC------CcEEEEecCcccccCCCCCchhH
Confidence            999999999887778888999999999999999999999999999987531      37999999998888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----------CchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----------APDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +||+|+++++++++.+++ ++||+|++|+||.+.+++.....          ..++..+...+..+.+++.+++|+++++
T Consensus       156 ~sKaa~~~l~~~la~e~~-~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~  234 (259)
T PRK12384        156 AAKFGGVGLTQSLALDLA-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNML  234 (259)
T ss_pred             HHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHH
Confidence            999999999999999997 88999999999976444332221          1234444556678899999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++|+++.+.+++|+++++|||..+
T Consensus       235 ~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        235 LFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             HHHcCcccccccCceEEEcCCEEe
Confidence            999998888999999999999875

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-39  Score=278.13  Aligned_cols=251  Identities=29%  Similarity=0.409  Sum_probs=219.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.++.+..++...+.++.++.+|+++.++++++++++.+.++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999999999999988888888876667799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCC-CCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGR-SSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~-~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++++.|.++.... .....++||++||..+..+.+....
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  165 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGL  165 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccH
Confidence            999999999987767777888899999999999999999999999998764211 1112479999999999888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|+++..++++++.++. ++||++++|+||+++|+... .....+.........+..+...|+|+++.+.||+++.+
T Consensus       166 Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~  243 (258)
T PRK06949        166 YCMSKAAVVHMTRAMALEWG-RHGINVNAICPGYIDTEINH-HHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES  243 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCCcCCcch-hccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence            99999999999999999996 78999999999999865433 22223333455666788899999999999999999999


Q ss_pred             CCccCcEEEeCCcc
Q 022335          250 KYVNGTTLIVDGGL  263 (299)
Q Consensus       250 ~~~~G~~i~~dgg~  263 (299)
                      .+++|++|.+|||+
T Consensus       244 ~~~~G~~i~~dgg~  257 (258)
T PRK06949        244 QFINGAIISADDGF  257 (258)
T ss_pred             cCCCCcEEEeCCCC
Confidence            99999999999997

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-39  Score=275.31  Aligned_cols=247  Identities=30%  Similarity=0.383  Sum_probs=220.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +.+++|+++||||+++||+++++.|+++|++|++++|++++++...+++...+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34679999999999999999999999999999999999988888888887666789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.++++..+++|+.+++.+++.+.++|.+++       .++||++||..+..+.+....
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  155 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-------RGRIVNLASDTALWGAPKLGA  155 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CeEEEEECchhhccCCCCcch
Confidence            9999999999987777778889999999999999999999999999998865       689999999999999888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.+++.++.++. .++|++++|+||+++|+... ...............+..++.+++|+|+++++++++..
T Consensus       156 y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  233 (250)
T PRK12939        156 YVASKGAVIGMTRSLARELG-GRGITVNAIAPGLTATEATA-YVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAA  233 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hhCEEEEEEEECCCCCcccc-ccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999996 78999999999999765432 23222444455566788889999999999999999888


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      ++++|+.|.+|||+.+
T Consensus       234 ~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        234 RFVTGQLLPVNGGFVM  249 (250)
T ss_pred             cCccCcEEEECCCccc
Confidence            8999999999999764

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.4e-39  Score=277.49  Aligned_cols=241  Identities=27%  Similarity=0.377  Sum_probs=207.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++||+++||||+++||+++++.|+++|++|++++|+.++.+...+++   +.++.++.+|+++.++++++++++.+++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4567999999999999999999999999999999999887666554433   4568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           90 GKLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        90 g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      +++|++|||||+...  .++.+.+.++|++.+++|+.+++.+++++.|+|.+.        .++||++||..+..+.++.
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~g~ii~~sS~~~~~~~~~~  154 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--------NGAIVNLASTRARQSEPDT  154 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--------CcEEEEEcchhhcCCCCCC
Confidence            999999999998643  466778899999999999999999999999999764        3789999999999998899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|+++|+|++.++++++.+++ . +|++++|+||+++|+..... ..+..........+.++..+|+|++.++.+++++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~-~-~i~v~~i~Pg~i~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  231 (255)
T PRK05717        155 EAYAASKGGLLALTHALAISLG-P-EIRVNAVSPGWIDARDPSQR-RAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSR  231 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHhc-C-CCEEEEEecccCcCCccccc-cchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999995 5 59999999999987643221 1222222233456788899999999999999998


Q ss_pred             CCCCccCcEEEeCCccc
Q 022335          248 TGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~  264 (299)
                      ...+++|+.+.+|||+.
T Consensus       232 ~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        232 QAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             hhcCccCcEEEECCCce
Confidence            88899999999999975

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-39  Score=281.76  Aligned_cols=246  Identities=34%  Similarity=0.490  Sum_probs=214.9

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +..+++|++|||||+++||.+++++|+++|++|++++|+.. ..+...+.+...+.++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999853 45556666665567899999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           88 HFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      .++++|+||||||.... .++.+.+.++|++++++|+.+++.+++++++.|+.         .++||++||..+..+.++
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---------~g~iV~isS~~~~~~~~~  191 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---------GSAIINTGSITGYEGNET  191 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---------CCeEEEEecccccCCCCC
Confidence            99999999999997644 56778899999999999999999999999999853         478999999999999888


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|+++|+|++.++++++.++. ++||++++|+||+++|+...... ..+....+....+.+++.+++|+|+++++|++
T Consensus       192 ~~~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~  269 (290)
T PRK06701        192 LIDYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFGSNTPMQRPGQPEELAPAYVFLAS  269 (290)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCCCCccccccc-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999997 88999999999999876443322 23333445566788889999999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.+.+++|+.|.+|||...
T Consensus       270 ~~~~~~~G~~i~idgg~~~  288 (290)
T PRK06701        270 PDSSYITGQMLHVNGGVIV  288 (290)
T ss_pred             cccCCccCcEEEeCCCccc
Confidence            9889999999999999754

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-39  Score=278.68  Aligned_cols=238  Identities=24%  Similarity=0.317  Sum_probs=203.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++||++|||||++|||++++++|+++|++|++++|+++.         ....++.++.+|++++++++++++++.+.++
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD---------DLPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh---------hcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999998653         1234688899999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-Cc
Q 022335           91 KLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQ  167 (299)
Q Consensus        91 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~  167 (299)
                      ++|++|||||...  ..++.+.+.++|++.+++|+.+++.++++++|+|+++.       .++||++||..+..+.+ ..
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~  149 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-------SGVIIHVTSIQRRLPLPEST  149 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEecccccCCCCCCc
Confidence            9999999999653  35677788999999999999999999999999998865       58999999999988865 78


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHH---HhcCCCCCCCCHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKA---RDYMPLYKLGEKW  235 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~  235 (299)
                      ..|+++|+++++|+++++.+++ ++||++|+|+||+++|+.....         ...++..+..   ....|.++..+|+
T Consensus       150 ~~Y~~sK~a~~~l~~~~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  228 (260)
T PRK06523        150 TAYAAAKAALSTYSKSLSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPE  228 (260)
T ss_pred             chhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHH
Confidence            9999999999999999999997 8899999999999987643211         0111211111   2346888899999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+|+++.||+++...+++|+.+.+|||...
T Consensus       229 ~va~~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        229 EVAELIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHHHHHHHhCcccccccCceEEecCCccC
Confidence            999999999999899999999999999764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=3.5e-39  Score=274.92  Aligned_cols=234  Identities=24%  Similarity=0.276  Sum_probs=200.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||++++++|+++|++|++++|+++..   .+++...+  +.++.+|++++++++++++++.+.++++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            67999999999999999999999999999999987543   23343333  67889999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||||+.......+.+.++|++++++|+.+++.+++.++|.|.+...     ..++||++||..+..+.+++..|++|
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~-----~~g~iv~~ss~~~~~~~~~~~~Y~as  151 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH-----AASDIIHITDYVVEKGSDKHIAYAAS  151 (236)
T ss_pred             EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC-----CCceEEEEcchhhccCCCCCccHHHH
Confidence            9999999865555667789999999999999999999999999987531     13789999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN  253 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  253 (299)
                      |+|+++|+++++.|++ + +|+||+|+||++.++..    ..+...+......++.+...|+|+++++.||++  ..+++
T Consensus       152 Kaal~~l~~~~a~e~~-~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~  223 (236)
T PRK06483        152 KAALDNMTLSFAAKLA-P-EVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVT  223 (236)
T ss_pred             HHHHHHHHHHHHHHHC-C-CcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcC
Confidence            9999999999999996 6 59999999999965421    123333344556788889999999999999997  57999


Q ss_pred             CcEEEeCCcccc
Q 022335          254 GTTLIVDGGLWL  265 (299)
Q Consensus       254 G~~i~~dgg~~~  265 (299)
                      |+++.+|||+.+
T Consensus       224 G~~i~vdgg~~~  235 (236)
T PRK06483        224 GRSLPVDGGRHL  235 (236)
T ss_pred             CcEEEeCccccc
Confidence            999999999765

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-39  Score=284.78  Aligned_cols=239  Identities=23%  Similarity=0.272  Sum_probs=206.6

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ++..++||++|||||++|||+++++.|+++|++|++++|+.+.++++.+++.. +.++..+.+|+++.++++++++++.+
T Consensus         3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999988888777743 45677788999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .++++|++|||||+....++.+.+.++|++++++|+.+++++++.++|.|.+.        .|+||++||..+..+.+++
T Consensus        82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~  153 (296)
T PRK05872         82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--------RGYVLQVSSLAAFAAAPGM  153 (296)
T ss_pred             HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------CCEEEEEeCHhhcCCCCCc
Confidence            99999999999999877888899999999999999999999999999999874        4899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc--CCCCCCCCHHHHHHHHHHHc
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY--MPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~  245 (299)
                      ..|++||+++++|+++++.|++ .+||++++|+||+++|++.................  .|..+..+|+|+++++.+++
T Consensus       154 ~~Y~asKaal~~~~~~l~~e~~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~  232 (296)
T PRK05872        154 AAYCASKAGVEAFANALRLEVA-HHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGI  232 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH-HHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHH
Confidence            9999999999999999999997 88999999999999876543322221222222222  36678899999999999999


Q ss_pred             CCCCCCccCcE
Q 022335          246 SDTGKYVNGTT  256 (299)
Q Consensus       246 s~~~~~~~G~~  256 (299)
                      +....+++|..
T Consensus       233 ~~~~~~i~~~~  243 (296)
T PRK05872        233 ERRARRVYAPR  243 (296)
T ss_pred             hcCCCEEEchH
Confidence            88777777653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-38  Score=274.60  Aligned_cols=240  Identities=24%  Similarity=0.346  Sum_probs=208.4

Q ss_pred             CCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCC-----------hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Q 022335           12 LKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRR-----------KQVLDAAVSALRSLGIKAVGFEGDVRRQEHA   78 (299)
Q Consensus        12 l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v   78 (299)
                      +++|++|||||++  |||.+++++|+++|++|++++|+           ......+.+++...+.++.++.+|+++.+++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5689999999994  99999999999999999999987           2222235555655567899999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                      +++++++.+.++++|+||||||+....++.+.+.+++++.+++|+.+++.+.+++++.|.+..       .++||++||.
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~ss~  155 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-------GGRIINLTSG  155 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-------CeEEEEECCc
Confidence            999999999999999999999987777788889999999999999999999999999997654       6899999999


Q ss_pred             cccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHH
Q 022335          159 LHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       159 ~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  238 (299)
                      .+..+.++...|+++|+|+++++++++.++. .+||++++|+||+++|+...     +..........+..++.+|+|+|
T Consensus       156 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~~~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~a  229 (256)
T PRK12748        156 QSLGPMPDELAYAATKGAIEAFTKSLAPELA-EKGITVNAVNPGPTDTGWIT-----EELKHHLVPKFPQGRVGEPVDAA  229 (256)
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCcccCCCCC-----hhHHHhhhccCCCCCCcCHHHHH
Confidence            9998888899999999999999999999997 88999999999999765322     22223334455667788999999


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      +.+.||+++...+++|+++.+|||+.
T Consensus       230 ~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        230 RLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHHHhCcccccccCCEEEecCCcc
Confidence            99999999988899999999999964

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-38  Score=281.90  Aligned_cols=248  Identities=25%  Similarity=0.316  Sum_probs=206.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+++||++|||||++|||++++++|+++|++|++++++. ...+...+++...+.++.++.+|+++.++++++++.+.+ 
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-
Confidence            468899999999999999999999999999999998754 556777888877777899999999999999999999998 


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +|++|+||||||+.....+.+.+.++|+..+++|+.+++++++++.++|+++.........|+||++||..+..+.++..
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  166 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQA  166 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCc
Confidence            99999999999988777788889999999999999999999999999997642111111247999999999998888999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|+++|+|+++|+++++.|+. ++||+||+|+||. .|++....... ......    ......+|++++..+.||+++.
T Consensus       167 ~Y~asKaal~~l~~~la~e~~-~~gI~vn~i~Pg~-~t~~~~~~~~~-~~~~~~----~~~~~~~pe~va~~v~~L~s~~  239 (306)
T PRK07792        167 NYGAAKAGITALTLSAARALG-RYGVRANAICPRA-RTAMTADVFGD-APDVEA----GGIDPLSPEHVVPLVQFLASPA  239 (306)
T ss_pred             hHHHHHHHHHHHHHHHHHHhh-hcCeEEEEECCCC-CCchhhhhccc-cchhhh----hccCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999997 8899999999995 45432211111 000000    1112358999999999999998


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      ..+++|+.+.++||...
T Consensus       240 ~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        240 AAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             ccCCCCCEEEEcCCeEE
Confidence            88999999999999765

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=273.85  Aligned_cols=241  Identities=32%  Similarity=0.426  Sum_probs=208.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||+++||++++++|+++|++|++++|+.+.++...+++   +.++.++++|+++.+++.++++.+.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            356899999999999999999999999999999999987666555444   55788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|.....++.+.+.++|++++++|+.+++.++++++|+|.+         .+++|+++|..+..+.+....|
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~~~i~~~S~~~~~~~~~~~~Y  150 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---------PASIVLNGSINAHIGMPNSSVY  150 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---------CCEEEEEechHhccCCCCccHH
Confidence            9999999999877677778899999999999999999999999999853         3689999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      +++|+++++++++++.++. ++||++++|+||+++++.....    ...+..........|..++.+|+|+++++++|++
T Consensus       151 ~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  229 (249)
T PRK06500        151 AASKAALLSLAKTLSGELL-PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLAS  229 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999996 8899999999999987643211    1112233344456678888999999999999999


Q ss_pred             CCCCCccCcEEEeCCccc
Q 022335          247 DTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~  264 (299)
                      +...+++|+.|.+|||..
T Consensus       230 ~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        230 DESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             ccccCccCCeEEECCCcc
Confidence            888999999999999964

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-39  Score=276.46  Aligned_cols=248  Identities=30%  Similarity=0.351  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.. +..+++...+.++.++.+|++++++++++++++.+.++
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            47799999999999999999999999999999999998766 66677766677899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|......+.+.. ++|++.+++|+.+++.+.+.++|.|++.        .++||++||..+..+.++...|
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y  153 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--------RGAIVNISSKTALTGQGGTSGY  153 (258)
T ss_pred             CCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--------CcEEEEECCHHhccCCCCCchh
Confidence            999999999976555555544 8999999999999999999999998754        4789999999999998899999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---CCc-hHHhHHHHhcCCCC-CCCCHHHHHHHHHHHc
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---LAP-DEINSKARDYMPLY-KLGEKWDIAMAALYLT  245 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---~~~-~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~  245 (299)
                      ++||+++++++++++.++. ++||++++|+||.++++.....   ... ...........+.. ++.+|+|+|+++++++
T Consensus       154 ~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  232 (258)
T PRK08628        154 AAAKGAQLALTREWAVALA-KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLL  232 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHh
Confidence            9999999999999999996 8899999999999987643221   111 11222223334553 6889999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccCCCC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLSRPR  269 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~~~~  269 (299)
                      ++...+++|+.+.+|||++.....
T Consensus       233 ~~~~~~~~g~~~~~~gg~~~~~~~  256 (258)
T PRK08628        233 SERSSHTTGQWLFVDGGYVHLDRA  256 (258)
T ss_pred             ChhhccccCceEEecCCccccccc
Confidence            998899999999999998775543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.5e-38  Score=273.00  Aligned_cols=245  Identities=28%  Similarity=0.440  Sum_probs=218.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |+++++|||||+++||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999998888888888776778999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|++|||+|.....++.+.+.++|++.+++|+.+++.+.+.+++.|++.+       .++||++||..+..+.++...|+
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~ii~iss~~~~~~~~~~~~Y~  153 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-------AGRIVNIASDAARVGSSGEAVYA  153 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CeEEEEECchhhccCCCCCchHH
Confidence            99999999987667778888999999999999999999999999998765       68999999999999989999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ++|+|++.++++++.++. +.||++++++||+++++.....    ..+......+....+.+++.+++|+|+++.+++++
T Consensus       154 ~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  232 (250)
T TIGR03206       154 ACKGGLVAFSKTMAREHA-RHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSD  232 (250)
T ss_pred             HHHHHHHHHHHHHHHHHh-HhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCc
Confidence            999999999999999996 7799999999999986643221    12233444555667888899999999999999999


Q ss_pred             CCCCccCcEEEeCCccc
Q 022335          248 TGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~  264 (299)
                      ...+++|+++.+|||+.
T Consensus       233 ~~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       233 DASFITGQVLSVSGGLT  249 (250)
T ss_pred             ccCCCcCcEEEeCCCcc
Confidence            99999999999999975

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.8e-38  Score=273.29  Aligned_cols=244  Identities=25%  Similarity=0.368  Sum_probs=216.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |+++||||+++||.+++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999988888888888777778999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      ||||+|.....++.+.+.++|++++++|+.+++.+++.+++.|++.+.      .++||++||..+..+.+.+..|+++|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~Y~~sK  154 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH------GGKIINAASIAGHEGNPILSAYSSTK  154 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC------CeEEEEecchhhcCCCCCCcchHHHH
Confidence            999999877778888999999999999999999999999999988642      47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC---------chHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---------PDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      ++++.+++.++.++. +.||++++|+||+++|+.......         .......+....+.+++.+|+|+++++.||+
T Consensus       155 ~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  233 (254)
T TIGR02415       155 FAVRGLTQTAAQELA-PKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLA  233 (254)
T ss_pred             HHHHHHHHHHHHHhc-ccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhc
Confidence            999999999999996 889999999999997664321110         1122334455678888999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++...+++|+++.+|||+.+
T Consensus       234 ~~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       234 SEDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             ccccCCccCcEEEecCCccC
Confidence            99999999999999999653

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=270.94  Aligned_cols=242  Identities=30%  Similarity=0.433  Sum_probs=214.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++|+++||||+++||+++++.|+++|++|+++.++. ...+.+.+++.+.+.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999998887654 44566777777777789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.++|++++++|+.+++.+++++++.|.+         .++||++||..+..+.+++..
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~~  152 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---------GGRIINLSTSVIALPLPGYGP  152 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---------CcEEEEEeeccccCCCCCCch
Confidence            99999999999876677788889999999999999999999999999853         478999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.++++++.++. +.||++++|+||+++|++..... ..+....+....|..+..+|+|+++.+.|++++.+
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  230 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELR-GRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDG  230 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            99999999999999999996 88999999999999876533322 23445566677888899999999999999999988


Q ss_pred             CCccCcEEEeCCcc
Q 022335          250 KYVNGTTLIVDGGL  263 (299)
Q Consensus       250 ~~~~G~~i~~dgg~  263 (299)
                      .+++|+.+++|||+
T Consensus       231 ~~~~g~~~~~~~g~  244 (245)
T PRK12937        231 AWVNGQVLRVNGGF  244 (245)
T ss_pred             cCccccEEEeCCCC
Confidence            99999999999986

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.5e-38  Score=271.36  Aligned_cols=236  Identities=24%  Similarity=0.338  Sum_probs=207.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++||||++|||.++++.|+++|++|++++|+ .+..+...+++++.+.++.++++|+++.++++++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999998865 556677777887777789999999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH-HHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL-KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      |||+|+....++.+.+.++|+.++++|+.+++++.++++ |.+++..       .++||++||..+..+.++...|+++|
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-------GGRIITLASVSGVMGNRGQVNYSAAK  153 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-------CeEEEEEcchhhccCCCCCcchHHHH
Confidence            999998777777788999999999999999999999886 5555444       58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccC
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNG  254 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  254 (299)
                      +++..++++++.++. ++||++++|+||+++|++.. ...  +..+......|++++.+|+|++++++||+++.+.+++|
T Consensus       154 ~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g  229 (239)
T TIGR01831       154 AGLIGATKALAVELA-KRKITVNCIAPGLIDTEMLA-EVE--HDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTR  229 (239)
T ss_pred             HHHHHHHHHHHHHHh-HhCeEEEEEEEccCccccch-hhh--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccC
Confidence            999999999999997 88999999999999866443 221  22233455688899999999999999999999999999


Q ss_pred             cEEEeCCcc
Q 022335          255 TTLIVDGGL  263 (299)
Q Consensus       255 ~~i~~dgg~  263 (299)
                      +.+.+|||+
T Consensus       230 ~~~~~~gg~  238 (239)
T TIGR01831       230 QVISVNGGM  238 (239)
T ss_pred             CEEEecCCc
Confidence            999999985

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-38  Score=270.92  Aligned_cols=246  Identities=31%  Similarity=0.460  Sum_probs=216.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++++++|||||+++||.+++++|+++|++|++++|+.+..+.+..++.. +.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            36789999999999999999999999999999999999888877777755 56789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||+|.... .++.+.+.++|++.+++|+.+++.+++.++++|.++.       .++||++||..+..+.++...
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~  153 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-------GGAIVNVASTAGLRPRPGLGW  153 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcChhhcCCCCCchH
Confidence            99999999997543 5577888999999999999999999999999998765       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |+.+|++++.+++.++.++. ++||++++++||+++++.......  .++.........+.+++.+|+|+|.++++|+++
T Consensus       154 y~~sk~~~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  232 (251)
T PRK07231        154 YNASKGAVITLTKALAAELG-PDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASD  232 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999996 789999999999997654332221  123334455667788899999999999999998


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      ...+++|+++.+|||..+
T Consensus       233 ~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        233 EASWITGVTLVVDGGRCV  250 (251)
T ss_pred             cccCCCCCeEEECCCccC
Confidence            888999999999999765

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-38  Score=271.18  Aligned_cols=247  Identities=34%  Similarity=0.514  Sum_probs=215.4

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..++++|++|||||+++||.+++++|+++|++|++++|+.++++...+++...+.++.++.+|++++++++++++++.+.
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~   86 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER   86 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888888776778889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH-HHhcCCCCCCCCCceEEEeccccccccCCC-
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY-LKKGGPGRSSAGGGSILNISATLHYTASWY-  166 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-  166 (299)
                      ++++|++|||+|.....+..+.+.+.|++.+++|+.+++.+++++.++ |.+++       .++||++||..+..+.+. 
T Consensus        87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-------~~~~v~~sS~~~~~~~~~~  159 (259)
T PRK08213         87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-------YGRIINVASVAGLGGNPPE  159 (259)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-------CeEEEEECChhhccCCCcc
Confidence            999999999999876667778889999999999999999999999998 66554       579999999887766543 


Q ss_pred             ---chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          167 ---QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       167 ---~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                         ...|+++|++++.++++++.++. ++||++++++||+++|+... ... +...+......|..++++|+|+++++.+
T Consensus       160 ~~~~~~Y~~sKa~~~~~~~~~a~~~~-~~gi~v~~v~Pg~~~t~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~  236 (259)
T PRK08213        160 VMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVNAIAPGFFPTKMTR-GTL-ERLGEDLLAHTPLGRLGDDEDLKGAALL  236 (259)
T ss_pred             ccCcchHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCcCCCcchh-hhh-HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence               48999999999999999999996 88999999999999765432 222 2233345566788888999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++++...+++|+.+.+|||..+
T Consensus       237 l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        237 LASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             HhCccccCccCCEEEECCCeec
Confidence            9999999999999999999764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=2.1e-38  Score=272.56  Aligned_cols=239  Identities=23%  Similarity=0.354  Sum_probs=209.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+|++|++|||||+++||++++++|+++|++|++++|+.         +...+.++.++++|++++++++++++++.+.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            347799999999999999999999999999999999986         22335578899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.+.|++..       .++||++||..+..+.++...
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~~  147 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-------SGAIVTVGSNAAHVPRIGMAA  147 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-------CCEEEEECCchhccCCCCCch
Confidence            9999999999987777888889999999999999999999999999998765       689999999999888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch--------HHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD--------EINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      |+++|+++..++++++.++. ++||++++|.||+++++.........        ...+......|..++.+|+|+|+++
T Consensus       148 Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  226 (252)
T PRK08220        148 YGASKAALTSLAKCVGLELA-PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAV  226 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhh-HhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHH
Confidence            99999999999999999997 88999999999999876432211111        0113344556788899999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++|+++...+++|+++.+|||..+
T Consensus       227 ~~l~~~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        227 LFLASDLASHITLQDIVVDGGATL  250 (252)
T ss_pred             HHHhcchhcCccCcEEEECCCeec
Confidence            999999899999999999999876

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=274.43  Aligned_cols=245  Identities=25%  Similarity=0.408  Sum_probs=198.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR----KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ..+++|+++||||++|||.++|+.|+++|++|++++++    .+..+...+++...+.++.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            35679999999999999999999999999997777643    34455666666665668899999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.++++|++|||||+....++.+.+.++|++++++|+.+++.+++++.|.|.+         .++|++++|.....+.+
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---------~~~iv~~~ss~~~~~~~  154 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---------NGKIVTLVTSLLGAFTP  154 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---------CCCEEEEecchhcccCC
Confidence            999999999999999877777888899999999999999999999999999864         36777764433334556


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH--HhHHHHhcCCCC--CCCCHHHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE--INSKARDYMPLY--KLGEKWDIAMAA  241 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~dva~~~  241 (299)
                      ++..|++||+|++.|+++++.|+. ++||+|++|+||++.|+........+.  .........+..  ++.+|+|+++++
T Consensus       155 ~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (257)
T PRK12744        155 FYSAYAGSKAPVEHFTRAASKEFG-ARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFI  233 (257)
T ss_pred             CcccchhhHHHHHHHHHHHHHHhC-cCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHH
Confidence            788999999999999999999997 889999999999998764332221111  001111223333  788999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .||+++ ..+++|+++.+|||+..
T Consensus       234 ~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        234 RFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             HHhhcc-cceeecceEeecCCccC
Confidence            999996 57899999999999764

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=276.97  Aligned_cols=237  Identities=28%  Similarity=0.360  Sum_probs=203.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-------LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      .+++|+++||||++|||.++++.|+++|++|++++|+.+.       ++...+++...+.++.++.+|++++++++++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999997642       455566676667789999999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      ++.+.++++|+||||+|.....++.+.+.++|++.+++|+.+++.++++++|+|+++.       .++||++||..+..+
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-------~g~iv~iss~~~~~~  155 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-------NPHILTLSPPLNLDP  155 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-------CCEEEEECCchhccc
Confidence            9999999999999999987777888889999999999999999999999999998865       689999999888777


Q ss_pred             C--CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC-ccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          164 S--WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPG-PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       164 ~--~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      .  +++..|++||+|+++++++++.|+. ++||+||+|+|| +++|+.... ...        ...+..+..+|+++|++
T Consensus       156 ~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~I~v~~i~Pg~~i~t~~~~~-~~~--------~~~~~~~~~~p~~va~~  225 (273)
T PRK08278        156 KWFAPHTAYTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIATAAVRN-LLG--------GDEAMRRSRTPEIMADA  225 (273)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeCCCccccHHHHh-ccc--------ccccccccCCHHHHHHH
Confidence            6  7889999999999999999999997 889999999999 565542211 111        11244567899999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCcccc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++++++...+++|+.+ .|++...
T Consensus       226 ~~~l~~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        226 AYEILSRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             HHHHhcCccccceeEEE-eccchhh
Confidence            99999998889999988 5766554

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-39  Score=270.41  Aligned_cols=222  Identities=20%  Similarity=0.267  Sum_probs=191.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++||+++||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++..+.+|++++++++++++++.+++|
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            36799999999999999999999999999999999999999999888877777888999999999999999999999999


Q ss_pred             -CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           91 -KLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        91 -~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                       ++|++|||+|... ..++.+.+.++|.+.+++|+.+++.+++.++|+|.++..      +|+||++||..+.   +++.
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~------~g~Iv~isS~~~~---~~~~  152 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK------KGVIVNVISHDDH---QDLT  152 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CceEEEEecCCCC---CCcc
Confidence             9999999998543 457888899999999999999999999999999987531      5899999997543   5678


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|+++|+|+.+|+++++.|++ ++||+||+|+||+++|+...   .+ +.++..           .+|++.+..||++  
T Consensus       153 ~Y~asKaal~~~~~~la~el~-~~~Irvn~v~PG~i~t~~~~---~~-~~~~~~-----------~~~~~~~~~~l~~--  214 (227)
T PRK08862        153 GVESSNALVSGFTHSWAKELT-PFNIRVGGVVPSIFSANGEL---DA-VHWAEI-----------QDELIRNTEYIVA--  214 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcCcCCCcc---CH-HHHHHH-----------HHHHHhheeEEEe--
Confidence            899999999999999999997 88999999999999875211   11 111111           1799999999997  


Q ss_pred             CCCccCcEEEe
Q 022335          249 GKYVNGTTLIV  259 (299)
Q Consensus       249 ~~~~~G~~i~~  259 (299)
                      +.++||+.+..
T Consensus       215 ~~~~tg~~~~~  225 (227)
T PRK08862        215 NEYFSGRVVEA  225 (227)
T ss_pred             cccccceEEee
Confidence            67999998764

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=4.4e-38  Score=268.12  Aligned_cols=232  Identities=24%  Similarity=0.367  Sum_probs=195.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|++|||||++|||++++++|+++|++|+++.+ +.+..+++.+++     .+.++.+|+++.+++.++++    .+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~----~~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVR----KS   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHH----Hh
Confidence            467999999999999999999999999999988876 444444443332     25678899999998877765    35


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCCch
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~  168 (299)
                      +++|++|||+|.....+..+.+.++|++.+++|+.+++.+++++++.|.+         .++||++||..+. .+.++..
T Consensus        74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~  144 (237)
T PRK12742         74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---------GGRIIIIGSVNGDRMPVAGMA  144 (237)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---------CCeEEEEeccccccCCCCCCc
Confidence            78999999999876667778889999999999999999999999999863         4789999998874 5778889


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|+++|++++.+++.++.+++ ++||+||+|+||+++|+.....   ....+......|++++.+|+|+++.+.||+++.
T Consensus       145 ~Y~~sKaa~~~~~~~la~~~~-~~gi~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        145 AYAASKSALQGMARGLARDFG-PRGITINVVQPGPIDTDANPAN---GPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             chHHhHHHHHHHHHHHHHHHh-hhCeEEEEEecCcccCCccccc---cHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999997 8899999999999987653321   122334445668889999999999999999999


Q ss_pred             CCCccCcEEEeCCccc
Q 022335          249 GKYVNGTTLIVDGGLW  264 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~  264 (299)
                      ..+++|+.+.+|||+.
T Consensus       221 ~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        221 ASFVTGAMHTIDGAFG  236 (237)
T ss_pred             cCcccCCEEEeCCCcC
Confidence            9999999999999975

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-38  Score=268.92  Aligned_cols=246  Identities=31%  Similarity=0.503  Sum_probs=214.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|++|+++||||+++||.+++++|+++|++|++++|+.+..+...+++. .+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999888777777765 456789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||+|......+.+.+.+++++++++|+.+++.+++.+++.|++.+       .++||++||..+..+.++...|
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~ii~~sS~~~~~~~~~~~~Y  153 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-------GGSIVNTASQLALAGGRGRAAY  153 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-------CeEEEEECChhhccCCCCccHH
Confidence            999999999987777778889999999999999999999999999998865       6899999999998888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----CchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----APDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      +.+|++++.++++++.++. .+||++++++||++.++.....+    .++..........+..++.+++|++++++++++
T Consensus       154 ~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~  232 (252)
T PRK06138        154 VASKGAIASLTRAMALDHA-TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS  232 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999996 78999999999999766433221    122222223334566668899999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +...+++|+.+.+|||+.+
T Consensus       233 ~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        233 DESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             chhcCccCCEEEECCCeec
Confidence            8889999999999999765

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=5.2e-38  Score=270.74  Aligned_cols=239  Identities=30%  Similarity=0.386  Sum_probs=203.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++|+++||||++|||+++|+.|+++|++|++++|+++.++.+.+++...  +..+.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999998888888887543  2346778999999999999999999999


Q ss_pred             CCccEEEEcCCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-
Q 022335           90 GKLDILVNAAAGNF---LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-  165 (299)
Q Consensus        90 g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-  165 (299)
                      +++|++|||||...   ...+.+.+.++|+..+++|+.+++.++++++|.|++++       .++||++||..+..+.. 
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~  154 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-------GGNLVNISSIYGVVAPKF  154 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-------CceEEEEechhhhccccc
Confidence            99999999997542   34677889999999999999999999999999998765       57999999987654321 


Q ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHH
Q 022335          166 ---------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       166 ---------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                               ....|++||+++++++++++.++. ++||++++|+||++.++.      ............+..++.+|+|
T Consensus       155 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~i~v~~i~Pg~~~~~~------~~~~~~~~~~~~~~~~~~~~~d  227 (256)
T PRK09186        155 EIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLDPDD  227 (256)
T ss_pred             hhccccccCCcchhHHHHHHHHHHHHHHHHHhC-cCCeEEEEEecccccCCC------CHHHHHHHHhcCCccCCCCHHH
Confidence                     224799999999999999999996 889999999999986542      1223333344456677899999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      +|+++++++++...+++|+.+.+|||+.
T Consensus       228 va~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        228 ICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             hhhhHhheeccccccccCceEEecCCcc
Confidence            9999999999888999999999999975

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.7e-38  Score=279.85  Aligned_cols=265  Identities=16%  Similarity=0.110  Sum_probs=213.2

Q ss_pred             EEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           18 LITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        18 lItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      |||||++|||++++++|+++| ++|++++|+.+.++...+++...+.++.++.+|+++.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999999888888777754455788899999999999999999998889999999


Q ss_pred             EcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc------------
Q 022335           97 NAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA------------  163 (299)
Q Consensus        97 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~------------  163 (299)
                      ||||+... .++.+.+.++|++++++|+.+++.+++.++|.|++.+.     ..|+||++||..+..+            
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~-----~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY-----PSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-----CCCEEEEEeccccccccccccCCCccch
Confidence            99998643 35667889999999999999999999999999987531     0379999999876421            


Q ss_pred             -----------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHH-h
Q 022335          164 -----------------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI-N  219 (299)
Q Consensus       164 -----------------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~  219 (299)
                                             ..+..+|++||+|+..+++.++.++.+..||++++|+||+|.++.+......... .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~  235 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLL  235 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHH
Confidence                                   1245789999999888899999999523699999999999943333322211110 0


Q ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc----ccCCCCCCchhHHHHHhHhhhhcc
Q 022335          220 SKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL----WLSRPRHLPKDAVKQLSRTVEKRS  287 (299)
Q Consensus       220 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~----~~~~~~~~~~~~~~~~~~~~~~~~  287 (299)
                      .......+.+++.+|++.|+.+++++++.....+|+++..+|+.    ....+.+.++..++++|+.+++..
T Consensus       236 ~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~  307 (308)
T PLN00015        236 FPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLV  307 (308)
T ss_pred             HHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhc
Confidence            00112234456789999999999999987778999999998864    245666778899999999998764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=8.9e-38  Score=267.39  Aligned_cols=242  Identities=28%  Similarity=0.403  Sum_probs=210.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++++++||||+++||++++++|+++|+.|++.+|+.+.++...+.+   +.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999887776655443   45688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.+.+.++.       .++||++||..+..+.++...|
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y  152 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-------YGRIINITSVVGVTGNPGQANY  152 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-------CCEEEEECCHHhCcCCCCCcch
Confidence            999999999987777777888999999999999999999999999887655       6899999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+|+.++++.++.++. .+||++++|+||+++++.. ... .+...+......+..++.+|+|+++++.+|+++...
T Consensus       153 ~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~  229 (245)
T PRK12936        153 CASKAGMIGFSKSLAQEIA-TRNVTVNCVAPGFIESAMT-GKL-NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAA  229 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcCcCchh-ccc-ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999996 7899999999999976533 222 222223344567888899999999999999998888


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|+++.+|||+.+
T Consensus       230 ~~~G~~~~~~~g~~~  244 (245)
T PRK12936        230 YVTGQTIHVNGGMAM  244 (245)
T ss_pred             CcCCCEEEECCCccc
Confidence            999999999999754

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=270.54  Aligned_cols=256  Identities=29%  Similarity=0.417  Sum_probs=220.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |++|++||||++++||.++++.|+++|++|++++|+.+..+...+++...  ..++.++.+|+++++++.++++++.+++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988877777777654  3578899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|++|||+|.... .++.+.+.++|+.++++|+.+++.+++++.+.|.+..       .++||++||..+..+.++..
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~  157 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-------GGSFVGISSIAASNTHRWFG  157 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEechhhcCCCCCCc
Confidence            999999999996533 5667788899999999999999999999999998765       58999999999988888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|+++|++++.+++.++.++. ..+|++++|+||+++++...................|..++.+++|+++++.+|++..
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (276)
T PRK05875        158 AYGVTKSAVDHLMKLAADELG-PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDA  236 (276)
T ss_pred             chHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999996 7899999999999987654433333333344445667888899999999999999988


Q ss_pred             CCCccCcEEEeCCccccCCCCCCchhH
Q 022335          249 GKYVNGTTLIVDGGLWLSRPRHLPKDA  275 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~~~~~~~~~~  275 (299)
                      ..+++|+.+++++|+.+.....+.+.+
T Consensus       237 ~~~~~g~~~~~~~g~~~~~~~~~~~~~  263 (276)
T PRK05875        237 ASWITGQVINVDGGHMLRRGPDFSSML  263 (276)
T ss_pred             hcCcCCCEEEECCCeeccCCccHHHHH
Confidence            889999999999998875544444433

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-38  Score=271.19  Aligned_cols=247  Identities=26%  Similarity=0.352  Sum_probs=215.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||+++||++++++|+++|++|++++|+++..++..+++.+.+.++.++.+|+++.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999999888888888877777889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHH-HhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYL-KKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m-~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||+|.....++.+.+.++++..+++|+.+++.+++.+++.| ++.+       .++||++||..+..+.+....
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-------~~~iv~~ss~~~~~~~~~~~~  156 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-------GGVVIYMGSVHSHEASPLKSA  156 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-------CcEEEEEcchhhcCCCCCCcc
Confidence            99999999998777777788899999999999999999999999999 5543       589999999998888888899


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC---------chHHh-HHHHhcCCCCCCCCHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---------PDEIN-SKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~dva~  239 (299)
                      |+++|+++.++++.++.++. +.||++++|+||+++++.....+.         .++.. ..+....+.+.+.+++|+++
T Consensus       157 y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  235 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ  235 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            99999999999999999996 789999999999998664322211         11111 12233456678999999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++++++.....++|+++.+|+|+.+
T Consensus       236 a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        236 TVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHHHcCccccCCcCCEEeeCCceec
Confidence            99999998778899999999999764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=6.2e-38  Score=272.17  Aligned_cols=247  Identities=23%  Similarity=0.326  Sum_probs=199.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHH----HHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHA----KKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v----~~~~~~~~~~   88 (299)
                      ++++||||++|||++++++|+++|++|++++| +++.++.+.+++... +.++.++.+|+++.+++    +++++.+.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999765 456777777777543 45677899999999865    5566666677


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSP-----------NGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ++++|+||||||.....++.+.+.           ++|.+.+++|+.+++.++++++++|+..... .....++||+++|
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAE-QRSTNLSIVNLCD  160 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc-cCCCCeEEEEehh
Confidence            899999999999866555544333           3589999999999999999999999654211 1112478999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCC-CCCCHHH
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLY-KLGEKWD  236 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d  236 (299)
                      ..+..+.+++.+|++||+|+++|+++++.|++ ++||++++|+||+++++..   +. ....+.+....+.. +..+|+|
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELA-PLQIRVNGVAPGLSLLPDA---MP-FEVQEDYRRKVPLGQREASAEQ  235 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCccCccc---cc-hhHHHHHHHhCCCCcCCCCHHH
Confidence            99998889999999999999999999999997 8899999999999864421   11 22223333445654 6789999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +++.++|++++...+++|+.+.+|||+++.+
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (267)
T TIGR02685       236 IADVVIFLVSPKAKYITGTCIKVDGGLSLTR  266 (267)
T ss_pred             HHHHHHHHhCcccCCcccceEEECCceeccC
Confidence            9999999999989999999999999988753

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-38  Score=279.62  Aligned_cols=224  Identities=24%  Similarity=0.321  Sum_probs=197.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+++.++++.+++++.+.++.++.+|+++.++++++++++.+.++
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999999999999999999999988788899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|+++.       .|+||+++|..+..+.+++..|
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-------~g~iV~isS~~~~~~~p~~~~Y  156 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-------HGIFINMISLGGFAAQPYAAAY  156 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-------CCEEEEEcChhhcCCCCCchhH
Confidence            999999999988778889999999999999999999999999999999876       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC-CeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          171 AAAKAAVDAITRNLALEWGADY-DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~-gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ++||+|+.+|+++|+.|+. ++ ||+|++|+||+++|+..........     ....+.....+|+++|+.+++++..
T Consensus       157 ~asKaal~~~~~sL~~El~-~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        157 SASKFGLRGFSEALRGELA-DHPDIHVCDVYPAFMDTPGFRHGANYTG-----RRLTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhC-CCCCeEEEEEecCCccCccccccccccc-----ccccCCCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999996 64 9999999999998764322110000     0111233467999999999998854

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-38  Score=268.63  Aligned_cols=232  Identities=26%  Similarity=0.348  Sum_probs=199.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|++|+++||||+++||++++++|+++|++|++++|+....         ...++.++.+|++++      ++++.+.++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~   66 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP   66 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence            36799999999999999999999999999999999975421         134688999999987      455555678


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|++|||+|+... .++.+.+.++|++.+++|+.++++++++++|.|.+++       .++||++||..+..+.++...
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~  139 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-------SGIIINMCSIASFVAGGGGAA  139 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcChhhccCCCCCcc
Confidence            99999999997543 5677888999999999999999999999999998765       689999999999998889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|+++++++++++.++. ++||++|+|+||+++|+.....+..+..........|.+++.+|+|+|++++||+++..
T Consensus       140 Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~  218 (235)
T PRK06550        140 YTASKHALAGFTKQLALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKA  218 (235)
T ss_pred             cHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhh
Confidence            99999999999999999997 88999999999999876543333333443444566788899999999999999999988


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+.+|||+++
T Consensus       219 ~~~~g~~~~~~gg~~~  234 (235)
T PRK06550        219 DYMQGTIVPIDGGWTL  234 (235)
T ss_pred             ccCCCcEEEECCceec
Confidence            9999999999999764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.9e-37  Score=265.93  Aligned_cols=243  Identities=33%  Similarity=0.531  Sum_probs=211.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++||||+++||.+++++|+++|++|+++.+ +++..++..+++.+.+.++.++++|+++++++.++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            367999999999999999999999999999987654 5566677777777666789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||......+.+.+.+++++.+++|+.+++.++++++|.|.+..       .++||++||..+..+.++...
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~  155 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-------EGRIISISSIIGQAGGFGQTN  155 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEEcchhhcCCCCCCcc
Confidence            9999999999987777777888999999999999999999999999998765       579999999999888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|+|+++++++++.++. +.||++++++||+++++.. ... ++..........+.+++..|+|++++++++++. .
T Consensus       156 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~-~~~-~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~  231 (247)
T PRK12935        156 YSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFIDTEMV-AEV-PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-G  231 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCCcChhh-hhc-cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-c
Confidence            99999999999999999996 7899999999999976533 222 233334444566777889999999999999975 3


Q ss_pred             CCccCcEEEeCCccc
Q 022335          250 KYVNGTTLIVDGGLW  264 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~  264 (299)
                      .+++|+.++++||..
T Consensus       232 ~~~~g~~~~i~~g~~  246 (247)
T PRK12935        232 AYITGQQLNINGGLY  246 (247)
T ss_pred             cCccCCEEEeCCCcc
Confidence            589999999999964

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.2e-37  Score=264.99  Aligned_cols=241  Identities=27%  Similarity=0.329  Sum_probs=209.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |+++||||+++||+++++.|+++|++|++++|+.. ..+.........+.++.++.+|+++.+++.++++++.++++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999854 23333333333455789999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|.....++.+.+.++|++++++|+.+++++++++++.|++..       .++||++||..+..+.++...|+++
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~iss~~~~~~~~~~~~Y~~s  155 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-------YGRIINISSVNGLKGQFGQTNYSAA  155 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-------CeEEEEECChhhccCCCCChHHHHH
Confidence            999999988777788889999999999999999999999999998765       6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN  253 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  253 (299)
                      |+|+++++++++.++. ++||++++++||+++++.... . .+..........+.+...+++|+++++.+|+++...+++
T Consensus       156 K~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  232 (245)
T PRK12824        156 KAGMIGFTKALASEGA-RYGITVNCIAPGYIATPMVEQ-M-GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFIT  232 (245)
T ss_pred             HHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcchhh-c-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999996 889999999999997654322 2 233444455567788889999999999999988888999


Q ss_pred             CcEEEeCCcccc
Q 022335          254 GTTLIVDGGLWL  265 (299)
Q Consensus       254 G~~i~~dgg~~~  265 (299)
                      |+.+.+|||+.+
T Consensus       233 G~~~~~~~g~~~  244 (245)
T PRK12824        233 GETISINGGLYM  244 (245)
T ss_pred             CcEEEECCCeec
Confidence            999999999864

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.2e-38  Score=295.41  Aligned_cols=246  Identities=29%  Similarity=0.456  Sum_probs=212.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++.+|++++++++++++++.+.+++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            46999999999999999999999999999999999988777665554   456888999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           92 LDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        92 id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +|+||||||+..  ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.      +++||++||..+..+.++...
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------g~~iv~isS~~~~~~~~~~~~  153 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH------GAAIVNVASGAGLVALPKRTA  153 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CCeEEEECCcccCCCCCCCch
Confidence            999999999743  356778899999999999999999999999999987541      249999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH-HhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |+++|+|+.+|+++++.|+. ++||+|++|+||+++|++......... .........+..++.+|+++++.+.||+++.
T Consensus       154 Y~asKaal~~l~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~  232 (520)
T PRK06484        154 YSASKAAVISLTRSLACEWA-AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQ  232 (520)
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999997 889999999999998765332111111 1223344567778899999999999999998


Q ss_pred             CCCccCcEEEeCCccccCC
Q 022335          249 GKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~~  267 (299)
                      ..+++|+.+.+|||+....
T Consensus       233 ~~~~~G~~~~~~gg~~~~~  251 (520)
T PRK06484        233 ASYITGSTLVVDGGWTVYG  251 (520)
T ss_pred             ccCccCceEEecCCeeccc
Confidence            9999999999999987654

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.7e-37  Score=266.70  Aligned_cols=241  Identities=31%  Similarity=0.441  Sum_probs=210.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++.+.+++....  ..+.++.+|++++++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 677777777775542  2356789999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|++.+       .++||++||..+..+.+++..|+++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~ii~~ss~~~~~~~~~~~~Y~~s  154 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-------PASIVNISSVAAFKAEPDYTAYNAS  154 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-------CcEEEEecChhhccCCCCCchhHHH
Confidence            999999988777888889999999999999999999999999998765       5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCC--CeEEEEEeCCccCCCCCCC---CCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          174 KAAVDAITRNLALEWGADY--DIRVNGIAPGPIGDTPGMN---KLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~--gi~v~~i~pG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |++++.++++++.++. .+  +|++++|+||+++|+....   ....++.........+..++.+|+|+++.+++|+++.
T Consensus       155 K~a~~~~~~~la~e~~-~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        155 KAAVASLTKSIALDCA-RRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             HHHHHHHHHHHHHHhc-ccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999996 54  5999999999998765422   1223344444555677788899999999999999998


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      ..+++|+.+.+|||...
T Consensus       234 ~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        234 SRFVTGAELVIDGGICA  250 (251)
T ss_pred             ccCccCCEEEECCCeec
Confidence            89999999999999753

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=267.79  Aligned_cols=241  Identities=28%  Similarity=0.446  Sum_probs=205.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+|++++||||++|||.+++++|+++|++|++++|+....+...+++.     ..++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYG   78 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4779999999999999999999999999999999999877666555442     25789999999999999999999999


Q ss_pred             CccEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-CCc
Q 022335           91 KLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-WYQ  167 (299)
Q Consensus        91 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-~~~  167 (299)
                      ++|++|||+|....  ..+.+.+.++|++.+++|+.+++.+++.++|+|+++.       .++||++||..+..+. ++.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-------~g~iv~~sS~~~~~g~~~~~  151 (255)
T PRK06057         79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-------KGSIINTASFVAVMGSATSQ  151 (255)
T ss_pred             CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-------CcEEEEEcchhhccCCCCCC
Confidence            99999999997543  4566778899999999999999999999999998765       5899999998877665 467


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ..|+++|++++.+++.++.++. ++||++++|+||+++|+....... ..+.........|.+++.+|+|+++++.+|++
T Consensus       152 ~~Y~~sKaal~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  230 (255)
T PRK06057        152 ISYTASKGGVLAMSRELGVQFA-RQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLAS  230 (255)
T ss_pred             cchHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            8899999999999999999997 789999999999998765433221 11222233345677889999999999999999


Q ss_pred             CCCCCccCcEEEeCCccc
Q 022335          247 DTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~  264 (299)
                      +...+++|+++.+|||..
T Consensus       231 ~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        231 DDASFITASTFLVDGGIS  248 (255)
T ss_pred             ccccCccCcEEEECCCee
Confidence            989999999999999975

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-37  Score=265.98  Aligned_cols=246  Identities=32%  Similarity=0.442  Sum_probs=217.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++|++||||++++||.+++++|+++|++|++++|+++.++...+++...+.++.++.+|++++++++++++++.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999999888888888777778999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||+|......+.+.+.++++..+++|+.+++.+++.+++.|++..       .++||++||..+..+.++...|+
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~iss~~~~~~~~~~~~y~  154 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-------GGRIINMASVHGLVGSAGKAAYV  154 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-------CeEEEEEcchhhccCCCCcchhH
Confidence            99999999987777788889999999999999999999999999999876       68999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------Cch-HHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APD-EINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ++|+++.++++.++.++. ..||++++++||++.++.....+         ... ..........+.+++.+++|+|+++
T Consensus       155 ~~k~a~~~~~~~l~~~~~-~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  233 (258)
T PRK12429        155 SAKHGLIGLTKVVALEGA-THGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYA  233 (258)
T ss_pred             HHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHH
Confidence            999999999999999996 78999999999999865432211         111 1122334445667889999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+++++....++|+++.+|||++.
T Consensus       234 ~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        234 LFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHHcCccccCccCCeEEeCCCEec
Confidence            999988778899999999999864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-37  Score=264.74  Aligned_cols=244  Identities=30%  Similarity=0.418  Sum_probs=206.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|++|||||++|||.++++.|+++|++|+++ .|+++.++...+++...+.++.+++||+++.++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999998876 467677777777787666789999999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-chHH
Q 022335           93 DILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHV  170 (299)
Q Consensus        93 d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~Y  170 (299)
                      |++|||+|+... .++.+.+.++|+..+++|+.+++.+++++++.|..++..    +.++||++||..+..+.+. +..|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----~~~~ii~~sS~~~~~~~~~~~~~Y  157 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGG----RGGAIVNVSSIASRLGSPNEYVDY  157 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC----CCcEEEEECchhhcCCCCCCCccc
Confidence            999999998654 457788899999999999999999999999998765321    1578999999988777664 5689


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+++++++++++.++. +.||++++|+||+++|+..... ...+.........|..+..+|+|+++.+++++++...
T Consensus       158 ~~sK~~~~~~~~~la~~~~-~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~  235 (248)
T PRK06947        158 AGSKGAVDTLTLGLAKELG-PHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAAS  235 (248)
T ss_pred             HhhHHHHHHHHHHHHHHhh-hhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999996 7899999999999987643321 1122223334556777889999999999999999889


Q ss_pred             CccCcEEEeCCcc
Q 022335          251 YVNGTTLIVDGGL  263 (299)
Q Consensus       251 ~~~G~~i~~dgg~  263 (299)
                      +++|++|.+|||.
T Consensus       236 ~~~G~~~~~~gg~  248 (248)
T PRK06947        236 YVTGALLDVGGGR  248 (248)
T ss_pred             CcCCceEeeCCCC
Confidence            9999999999983

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=266.24  Aligned_cols=249  Identities=32%  Similarity=0.444  Sum_probs=216.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..+++|+++||||+++||+.++++|+++|++ |++++|+.+..+...+++...+.++.++.+|+++++++.++++.+.+.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999 999999988877777777666778889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++++.|.++..      .++||++||..+..+.++..
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~g~iv~~ss~~~~~~~~~~~  155 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA------EGTIVNIGSMSAHGGQPFLA  155 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CCEEEEECCcccccCCCCcc
Confidence            999999999999877677778899999999999999999999999999987531      47999999999988888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---CC--CchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---KL--APDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .|+++|+++++++++++.++. ..||++++|+||++.++....   .+  .............+.+++.+++|+++++.+
T Consensus       156 ~Y~~sK~a~~~~~~~~a~e~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  234 (260)
T PRK06198        156 AYCASKGALATLTRNAAYALL-RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAF  234 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHH
Confidence            999999999999999999997 889999999999998764211   11  112223334445677888999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++++...+++|+.+.+|+|.+-
T Consensus       235 l~~~~~~~~~G~~~~~~~~~~~  256 (260)
T PRK06198        235 LLSDESGLMTGSVIDFDQSVWG  256 (260)
T ss_pred             HcChhhCCccCceEeECCcccc
Confidence            9998888999999999999764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=7.6e-38  Score=269.97  Aligned_cols=237  Identities=20%  Similarity=0.195  Sum_probs=198.2

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           16 VALITGGGSGIGFEISTQFGK----HGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~----~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++||||++|||++++++|++    +|++|++++|+.+.++++.+++...  +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999999988888763  4578899999999999999999998887


Q ss_pred             CCc----cEEEEcCCCCCCC--CCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           90 GKL----DILVNAAAGNFLV--SAED-LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        90 g~i----d~lv~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +.+    |+||||||+....  ...+ .+.++|++.+++|+.+++.+++.++|.|+++..     ..++||++||..+..
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~-----~~~~iv~isS~~~~~  156 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPG-----LNRTVVNISSLCAIQ  156 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCC-----CCCEEEEECCHHhCC
Confidence            653    6999999975432  2232 357899999999999999999999999986520     147899999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---CCchHHhHHHHhcCCCCCCCCHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---LAPDEINSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~  239 (299)
                      +.+++..|++||+|+++|+++++.|+. ++||+||+|+||+++|++....   ...++....+....|.+++.+|+|+|+
T Consensus       157 ~~~~~~~Y~asKaal~~l~~~la~e~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~  235 (256)
T TIGR01500       157 PFKGWALYCAGKAARDMLFQVLALEEK-NPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQ  235 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHH
Confidence            999999999999999999999999997 8899999999999987643211   111223334455668888999999999


Q ss_pred             HHHHHcCCCCCCccCcEEEe
Q 022335          240 AALYLTSDTGKYVNGTTLIV  259 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~  259 (299)
                      .++++++ ..++++|+++.+
T Consensus       236 ~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       236 KLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHHh-cCCcCCcceeec
Confidence            9999996 467999998875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-37  Score=263.29  Aligned_cols=245  Identities=29%  Similarity=0.439  Sum_probs=212.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++|+++||||+++||++++++|+++|++|++++|+++..+.+.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35679999999999999999999999999999999999888778877776656678889999999999999999999999


Q ss_pred             CCccEEEEcCCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           90 GKLDILVNAAAGNF---LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        90 g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +++|+||||+|+..   ..++.+.+.++|++.+++|+.+++.+++++++.|.+.+       .++||++||..+..+   
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~---  151 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-------GGAIVNQSSTAAWLY---  151 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-------CcEEEEEecccccCC---
Confidence            99999999999753   34566778899999999999999999999999998765       689999999877543   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||+|++.++++++.++. ..||++++++||.++++... ...++..........+..+..+|+|+++.++++++
T Consensus       152 ~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~  229 (250)
T PRK07774        152 SNFYGLAKVGLNGLTQQLARELG-GMNIRVNAIAPGPIDTEATR-TVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLS  229 (250)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCcccCcccc-ccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            56899999999999999999996 78999999999999865433 33344555556667777788999999999999998


Q ss_pred             CCCCCccCcEEEeCCccccC
Q 022335          247 DTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +...+.+|+.+++++|..+.
T Consensus       230 ~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        230 DEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             hhhhCcCCCEEEECCCeecc
Confidence            77678899999999998764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-37  Score=266.91  Aligned_cols=227  Identities=22%  Similarity=0.207  Sum_probs=193.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++++||||++|||+++|++|+ +|++|++++|+.++++++.+++++.+. ++.+++||++++++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999 599999999999999999888877654 488999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|+....+..+.+.+++.+++++|+.+++.+++.++|.|.++..      +|+||++||..+..+.++...|++|
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~------~g~Iv~isS~~~~~~~~~~~~Y~as  153 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA------PAAIVAFSSIAGWRARRANYVYGST  153 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC------CCEEEEEeccccccCCcCCcchhhH
Confidence            9999999876655666777888899999999999999999999986531      4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN  253 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  253 (299)
                      |+|+++|+++++.|++ ++||+||+|+||+++|++.. ...            +.....+|+|+|+.++++++....   
T Consensus       154 Kaa~~~~~~~la~el~-~~~I~v~~v~PG~v~T~~~~-~~~------------~~~~~~~pe~~a~~~~~~~~~~~~---  216 (246)
T PRK05599        154 KAGLDAFCQGLADSLH-GSHVRLIIARPGFVIGSMTT-GMK------------PAPMSVYPRDVAAAVVSAITSSKR---  216 (246)
T ss_pred             HHHHHHHHHHHHHHhc-CCCceEEEecCCcccchhhc-CCC------------CCCCCCCHHHHHHHHHHHHhcCCC---
Confidence            9999999999999997 88999999999999865422 111            111135899999999999976432   


Q ss_pred             CcEEEeCCcccc
Q 022335          254 GTTLIVDGGLWL  265 (299)
Q Consensus       254 G~~i~~dgg~~~  265 (299)
                      ++.+.++++..+
T Consensus       217 ~~~~~~~~~~~~  228 (246)
T PRK05599        217 STTLWIPGRLRV  228 (246)
T ss_pred             CceEEeCccHHH
Confidence            556777776533

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=8e-37  Score=260.99  Aligned_cols=240  Identities=29%  Similarity=0.420  Sum_probs=211.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |++|||||+++||.+++++|+++|++|+++.| +++..+.+.+++...+.++.++.+|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999888 66666666666655566899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||+|......+.+.+.++|++.+.+|+.+++.+++.+++.|++..       .++||++||..+..+.+++..|+++
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~iss~~~~~~~~~~~~y~~s  153 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-------WGRIINISSVNGQKGQFGQTNYSAA  153 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEcchhhcCCCCCcchhHHH
Confidence            999999987777777889999999999999999999999999998865       5899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN  253 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  253 (299)
                      |+++..++++++.++. .+||+++++.||+++++... ... +.....+....+..++.+|+++++.+.||+++...+++
T Consensus       154 k~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  230 (242)
T TIGR01829       154 KAGMIGFTKALAQEGA-TKGVTVNTISPGYIATDMVM-AMR-EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYIT  230 (242)
T ss_pred             HHHHHHHHHHHHHHhh-hhCeEEEEEeeCCCcCcccc-ccc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            9999999999999996 78999999999999866432 222 33344455567888899999999999999998888999


Q ss_pred             CcEEEeCCccc
Q 022335          254 GTTLIVDGGLW  264 (299)
Q Consensus       254 G~~i~~dgg~~  264 (299)
                      |+.+.+|||+.
T Consensus       231 G~~~~~~gg~~  241 (242)
T TIGR01829       231 GATLSINGGLY  241 (242)
T ss_pred             CCEEEecCCcc
Confidence            99999999975

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-37  Score=263.76  Aligned_cols=245  Identities=32%  Similarity=0.419  Sum_probs=211.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++++++||||+++||.+++++|+++|++|+++ .|+.+.++...+++...+.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998774 788877777777776556678899999999999999999999887


Q ss_pred             ------CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           90 ------GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        90 ------g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                            +++|++|||+|......+.+.+.+.|+..+++|+.+++++++.+.+.|.+         .++||++||..+..+
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~~~v~~sS~~~~~~  153 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---------EGRVINISSAEVRLG  153 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---------CCEEEEECCHHhcCC
Confidence                  47999999999877777788899999999999999999999999999854         368999999999888


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .++...|++||+|++.++++++.++. ++|+++++++||+++++........+..........+.++..+++|+++.+.+
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  232 (254)
T PRK12746        154 FTGSIAYGLSKGALNTMTLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAF  232 (254)
T ss_pred             CCCCcchHhhHHHHHHHHHHHHHHHh-hcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence            89999999999999999999999996 88999999999999766543333333333333455667788899999999999


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++++...+++|+.++++||+++
T Consensus       233 l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        233 LASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             HcCcccCCcCCCEEEeCCCccC
Confidence            9988778899999999999753

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-37  Score=261.81  Aligned_cols=244  Identities=30%  Similarity=0.389  Sum_probs=207.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++++|||||+++||.+++++|+++|++|+++. ++++..+...+++...+.++.++.+|+++.++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999998876 45556666667776666778899999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-chHH
Q 022335           93 DILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHV  170 (299)
Q Consensus        93 d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~Y  170 (299)
                      |+||||+|.... .++.+.+.++|++.+++|+.+++.+++++++.|.++...    ..|+||++||..+..+.+. ...|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----~~g~iv~~sS~~~~~~~~~~~~~Y  157 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGG----RGGAIVNVSSMAARLGSPGEYIDY  157 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC----CCeEEEEECchhhcCCCCCCccch
Confidence            999999998654 467788899999999999999999999999999864311    1478999999998888776 4679


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+++++|+++++.++. ++||++++|+||++.++..... .............|+.+..+|+|+++++++++++...
T Consensus       158 ~~sKaa~~~~~~~la~~~~-~~~i~v~~i~pg~v~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~  235 (248)
T PRK06123        158 AASKGAIDTMTIGLAKEVA-AEGIRVNAVRPGVIYTEIHASG-GEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEAS  235 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCchhhcc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999996 8899999999999986643322 2233334455667888889999999999999998888


Q ss_pred             CccCcEEEeCCcc
Q 022335          251 YVNGTTLIVDGGL  263 (299)
Q Consensus       251 ~~~G~~i~~dgg~  263 (299)
                      +++|+.++++||.
T Consensus       236 ~~~g~~~~~~gg~  248 (248)
T PRK06123        236 YTTGTFIDVSGGR  248 (248)
T ss_pred             CccCCEEeecCCC
Confidence            9999999999873

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=277.93  Aligned_cols=260  Identities=23%  Similarity=0.300  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++++++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            35679999999999999999999999999999999999999999988888778889999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|++|||+|.....++.+.+.++|++++++|+.+++++++.++++|.+++       .++||++||..+..+.+.+..
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-------~g~iV~isS~~~~~~~~~~~~  156 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-------RGAIIQVGSALAYRSIPLQSA  156 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEeCChhhccCCCcchH
Confidence            9999999999987777888999999999999999999999999999999875       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGA-DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~-~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |+++|+++++|+++++.|+.. ..+|++++|+||+++|+... ...  ..  ......+..+..+|+|+|++++++++..
T Consensus       157 Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~-~~~--~~--~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        157 YCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD-WAR--SR--LPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh-hhh--hh--ccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999852 24799999999999865321 110  00  0011223456789999999999999754


Q ss_pred             C--CCccCcEEEeCCccccCCCCCCchhHHHHHhHh
Q 022335          249 G--KYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRT  282 (299)
Q Consensus       249 ~--~~~~G~~i~~dgg~~~~~~~~~~~~~~~~~~~~  282 (299)
                      .  -++.+.....+.+..+ .|.+++....+..++.
T Consensus       232 ~~~~~vg~~~~~~~~~~~~-~P~~~~~~~~~~~~~~  266 (334)
T PRK07109        232 RRELWVGGPAKAAILGNRL-APGLLDRYLARTGYRG  266 (334)
T ss_pred             CcEEEeCcHHHHHHHHHHh-CcHHHHHHHHHHHHHh
Confidence            2  2455555555555443 3555443334444443

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-37  Score=268.23  Aligned_cols=228  Identities=24%  Similarity=0.252  Sum_probs=194.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.+|
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            47799999999999999999999999999999999999988888888877677889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|.+++.      +|+||++||..+..+.++...|
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~------~g~iv~isS~~~~~~~~~~~~Y  156 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT------GGHVVFTASFAGLVPNAGLGAY  156 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC------CCEEEEeCChhhccCCCCCchH
Confidence            9999999999987788889999999999999999999999999999987542      4899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--CchH-----HhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--APDE-----INSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      ++||+|+.+|+++++.|++ ++||++++|+||+++|+......  ....     ...............+|+|+|+.++.
T Consensus       157 ~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  235 (275)
T PRK05876        157 GVAKYGVVGLAETLAREVT-ADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTAD  235 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHH
Confidence            9999999999999999996 88999999999999876432110  0000     00000111112346799999999887


Q ss_pred             Hc
Q 022335          244 LT  245 (299)
Q Consensus       244 l~  245 (299)
                      -+
T Consensus       236 ai  237 (275)
T PRK05876        236 AI  237 (275)
T ss_pred             HH
Confidence            66

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=260.12  Aligned_cols=241  Identities=26%  Similarity=0.343  Sum_probs=205.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ....+|++|||||++|||++++++|+++|++|+++.+ +.+.++.+.+++...+.++.++.+|+++.+++.++++++.+.
T Consensus         5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999988766 455666777777666778999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|+||||||.....++.+.+.++|++++++|+.+++.+++++.+.|.+..       .++||+++|..+..+.+.+.
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~~s~~~~~~~p~~~  157 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-------RGLVVNMIDQRVWNLNPDFL  157 (258)
T ss_pred             cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CceEEEECchhhcCCCCCch
Confidence            99999999999987777788889999999999999999999999999998764       68999999988888888888


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|++||++++.++++++.++. +. |++++|+||++.+....   .. ..........+.++..+++|+|++++++++. 
T Consensus       158 ~Y~~sK~a~~~~~~~la~~~~-~~-i~v~~i~PG~v~t~~~~---~~-~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-  230 (258)
T PRK09134        158 SYTLSKAALWTATRTLAQALA-PR-IRVNAIGPGPTLPSGRQ---SP-EDFARQHAATPLGRGSTPEEIAAAVRYLLDA-  230 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CC-cEEEEeecccccCCccc---Ch-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC-
Confidence            999999999999999999995 54 99999999999754211   11 2222333456677789999999999999973 


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                       .+++|+.+.+|||..+
T Consensus       231 -~~~~g~~~~i~gg~~~  246 (258)
T PRK09134        231 -PSVTGQMIAVDGGQHL  246 (258)
T ss_pred             -CCcCCCEEEECCCeec
Confidence             5689999999999754

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-37  Score=260.05  Aligned_cols=213  Identities=25%  Similarity=0.305  Sum_probs=179.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +++||||++|||+++++.|+++|++|++++|+.++++...+++     ++.++.+|++++++++++++++.+   ++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            4899999999999999999999999999999988777665554     356789999999999999887643   69999


Q ss_pred             EEcCCCCCC------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           96 VNAAAGNFL------VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        96 v~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |||+|....      .++.+ +.++|++++++|+.++++++++++|.|++         .|+||++||..    .+....
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---------~g~Iv~isS~~----~~~~~~  139 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---------GGSIISVVPEN----PPAGSA  139 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------CCeEEEEecCC----CCCccc
Confidence            999985321      12333 46899999999999999999999999963         48999999976    345688


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+++++.|++ ++||+||+|+||+++|+...          .. ...|.   .+|+|+++.+.||+++.+
T Consensus       140 Y~asKaal~~~~~~la~e~~-~~gI~v~~v~PG~v~t~~~~----------~~-~~~p~---~~~~~ia~~~~~l~s~~~  204 (223)
T PRK05884        140 EAAIKAALSNWTAGQAAVFG-TRGITINAVACGRSVQPGYD----------GL-SRTPP---PVAAEIARLALFLTTPAA  204 (223)
T ss_pred             cHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccCchhhh----------hc-cCCCC---CCHHHHHHHHHHHcCchh
Confidence            99999999999999999997 88999999999999865321          00 11232   389999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+.+|||+..
T Consensus       205 ~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        205 RHITGQTLHVSHGALA  220 (223)
T ss_pred             hccCCcEEEeCCCeec
Confidence            9999999999999865

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=259.25  Aligned_cols=242  Identities=31%  Similarity=0.481  Sum_probs=208.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC----ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR----RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r----~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+++++++||||+++||++++++|+++|++|++++|    +.+..+...+++...+.++.++.+|+++.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999765    4455566666666666789999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH-HHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL-KYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      +.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++. +.|++..       .++||++||..+..+.+
T Consensus        83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~  155 (249)
T PRK12827         83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-------GGRIVNIASVAGVRGNR  155 (249)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-------CeEEEEECCchhcCCCC
Confidence            999999999999998877788888999999999999999999999999 6666554       57899999999998888


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|+.+|++++.++++++.++. ++||++++|+||+++|+.......    ........+.....+++|+++.+++++
T Consensus       156 ~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~  230 (249)
T PRK12827        156 GQVNYAASKAGLIGLTKTLANELA-PRGITVNAVAPGAINTPMADNAAP----TEHLLNPVPVQRLGEPDEVAALVAFLV  230 (249)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEECCcCCCcccccch----HHHHHhhCCCcCCcCHHHHHHHHHHHc
Confidence            999999999999999999999996 789999999999998764332221    133344556667789999999999999


Q ss_pred             CCCCCCccCcEEEeCCccc
Q 022335          246 SDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~  264 (299)
                      ++...+++|+.+.+|||++
T Consensus       231 ~~~~~~~~g~~~~~~~g~~  249 (249)
T PRK12827        231 SDAASYVTGQVIPVDGGFC  249 (249)
T ss_pred             CcccCCccCcEEEeCCCCC
Confidence            9888899999999999975

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=269.27  Aligned_cols=263  Identities=21%  Similarity=0.229  Sum_probs=207.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.    ++.++.+|+++.++++++++++.+.++
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            5689999999999999999999999999999999999888777766663    378899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc--------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT--------  162 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~--------  162 (299)
                      ++|+||||||+...  ..+.+.++|+..+++|+.+++.+++.++|.|.+..       .++||++||..+..        
T Consensus        99 ~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-------~~~iV~vSS~~~~~~~~~~~~~  169 (315)
T PRK06196         99 RIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-------GARVVALSSAGHRRSPIRWDDP  169 (315)
T ss_pred             CCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CCeEEEECCHHhccCCCCcccc
Confidence            99999999997543  23445678999999999999999999999998865       58999999976532        


Q ss_pred             ----cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhH-HHHh--cCCCC-CCCCH
Q 022335          163 ----ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS-KARD--YMPLY-KLGEK  234 (299)
Q Consensus       163 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~--~~~~~-~~~~~  234 (299)
                          +.+....|++||+|+..+++.++.++. ++||++++|+||++.|+.. .......... .+..  ..++. ++.+|
T Consensus       170 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~gi~v~~v~PG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (315)
T PRK06196        170 HFTRGYDKWLAYGQSKTANALFAVHLDKLGK-DQGVRAFSVHPGGILTPLQ-RHLPREEQVALGWVDEHGNPIDPGFKTP  247 (315)
T ss_pred             CccCCCChHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeeCCcccCCcc-ccCChhhhhhhhhhhhhhhhhhhhcCCH
Confidence                334567899999999999999999996 8899999999999986643 3322221111 0110  11222 46799


Q ss_pred             HHHHHHHHHHcCCCCCCccCcEEEeCCcccc----------CCCCCCchhHHHHHhHhhhhccC
Q 022335          235 WDIAMAALYLTSDTGKYVNGTTLIVDGGLWL----------SRPRHLPKDAVKQLSRTVEKRSR  288 (299)
Q Consensus       235 ~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~----------~~~~~~~~~~~~~~~~~~~~~~~  288 (299)
                      +++|.+++|+++.......|..+..|.+...          ..+...+....+++|+.+++..+
T Consensus       248 ~~~a~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~  311 (315)
T PRK06196        248 AQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTG  311 (315)
T ss_pred             hHHHHHHHHHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence            9999999999975544444555554543321          24456778889999999988765

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.9e-36  Score=258.28  Aligned_cols=242  Identities=31%  Similarity=0.470  Sum_probs=208.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++++++||||++++||.++++.|+++|++|++++|+.++++...+++...+.++.++.+|+++.++++++++.+.+.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999998888888888777778999999999999999999999988899


Q ss_pred             ccEEEEcCCCCCCCCC---------CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           92 LDILVNAAAGNFLVSA---------EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        92 id~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +|++|||+|.......         .+.+.++|+.++++|+.+++.+.+.+++.|.+...      .+.||++||.. ..
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~------~~~iv~~ss~~-~~  155 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS------KGVIINISSIA-RA  155 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC------CeEEEEEcccc-cc
Confidence            9999999997543222         56678999999999999999999999999987531      57899999874 45


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.++...|+++|+|+++++++++.++. ++||++++++||+++++... .. .+...+......|.+++.+++|+++++.
T Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~  232 (253)
T PRK08217        156 GNMGQTNYSASKAGVAAMTVTWAKELA-RYGIRVAAIAPGVIETEMTA-AM-KPEALERLEKMIPVGRLGEPEEIAHTVR  232 (253)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCcccc-cc-CHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence            667889999999999999999999996 78999999999999766442 22 3444455566778888999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCcccc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++++  ..+++|+.+.+|||+.+
T Consensus       233 ~l~~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        233 FIIE--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             HHHc--CCCcCCcEEEeCCCccC
Confidence            9995  36899999999999853

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.9e-36  Score=268.58  Aligned_cols=269  Identities=16%  Similarity=0.101  Sum_probs=210.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .+|+++||||++|||++++++|+++| ++|++++|+.+.++++.+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 99999999998888887777544567888999999999999999999888999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-------
Q 022335           92 LDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-------  163 (299)
Q Consensus        92 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-------  163 (299)
                      +|++|||||+..+ .+..+.+.++|+.++++|+.+++.+++.++|+|++...     ..++||++||..+..+       
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~-----~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN-----KDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC-----CCCeEEEEecCccccccCCCcCC
Confidence            9999999997543 23446688999999999999999999999999987531     1379999999876421       


Q ss_pred             --------------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC-CCCCCCCCCch
Q 022335          164 --------------------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG-DTPGMNKLAPD  216 (299)
Q Consensus       164 --------------------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~-t~~~~~~~~~~  216 (299)
                                                .....+|++||+|+..+++.+++++..++||++++|+||+|. |+... .....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~-~~~~~  235 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFR-EHVPL  235 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccc-cccHH
Confidence                                      124578999999999999999999842469999999999994 54332 21111


Q ss_pred             H--HhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc----ccCCCCCCchhHHHHHhHhhhhccC
Q 022335          217 E--INSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL----WLSRPRHLPKDAVKQLSRTVEKRSR  288 (299)
Q Consensus       217 ~--~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~----~~~~~~~~~~~~~~~~~~~~~~~~~  288 (299)
                      .  ..... .........+|++.|..+++++.+.....+|.++..++..    ......+.++...+++|+.++++.+
T Consensus       236 ~~~~~~~~-~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  312 (314)
T TIGR01289       236 FRTLFPPF-QKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVG  312 (314)
T ss_pred             HHHHHHHH-HHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhc
Confidence            0  00111 1111234578999999999988765444578888765542    2356667888999999999998764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=2.8e-36  Score=291.00  Aligned_cols=250  Identities=28%  Similarity=0.375  Sum_probs=216.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-C-CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-G-IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~-~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..|++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... + .++.++.+|+++.++++++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888877777543 2 3678899999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .+|++|+||||||+....++.+.+.++|+..+++|+.+++.+++.+++.|+++..      .++||++||..+..+.++.
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~------~g~IV~iSS~~a~~~~~~~  563 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL------GGNIVFIASKNAVYAGKNA  563 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCEEEEEeChhhcCCCCCC
Confidence            9999999999999877777888899999999999999999999999999987531      4789999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCC-CCC-C----------CCchHHhHHHHhcCCCCCCCCHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP-GMN-K----------LAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~-~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      ..|++||++++.++++++.+++ ++||+||+|+||++.++. ... .          +..++....+....++++..+|+
T Consensus       564 ~aY~aSKaA~~~l~r~lA~el~-~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~pe  642 (676)
T TIGR02632       564 SAYSAAKAAEAHLARCLAAEGG-TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA  642 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHH
Confidence            9999999999999999999997 889999999999986421 111 0          11222334455677889999999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+|+++++|+++...++||+.+.+|||+...
T Consensus       643 DVA~av~~L~s~~~~~~TG~~i~vDGG~~~~  673 (676)
T TIGR02632       643 DIAEAVFFLASSKSEKTTGCIITVDGGVPAA  673 (676)
T ss_pred             HHHHHHHHHhCCcccCCcCcEEEECCCchhc
Confidence            9999999999988889999999999997653

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=258.27  Aligned_cols=231  Identities=20%  Similarity=0.310  Sum_probs=200.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCC--HHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRR--QEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~--~~~v~~~~~~~~~   87 (299)
                      .|++|+++||||++|||++++++|+++|++|++++|+++.++...+++.+.+ .++.++.+|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            5779999999999999999999999999999999999998888888886553 467788999985  6789999999999


Q ss_pred             Hc-CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           88 HF-GKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        88 ~~-g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+ +++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++++.|.+..       .++||+++|..+..+.+
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~  155 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-------DASVIFVGESHGETPKA  155 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-------CCEEEEEeccccccCCC
Confidence            88 899999999997543 5678889999999999999999999999999998765       58999999999999988


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCC-CeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADY-DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~-gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +...|++||+|++.++++++.|+. ++ +|+|++|+||+++|++.......+.          ..+..+++|++..++|+
T Consensus       156 ~~~~Y~~sKaa~~~~~~~la~e~~-~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~  224 (239)
T PRK08703        156 YWGGFGASKAALNYLCKVAADEWE-RFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWW  224 (239)
T ss_pred             CccchHHhHHHHHHHHHHHHHHhc-cCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHH
Confidence            899999999999999999999996 65 6999999999998765332221111          11346999999999999


Q ss_pred             cCCCCCCccCcEEEe
Q 022335          245 TSDTGKYVNGTTLIV  259 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~  259 (299)
                      +++.+.++||++|.+
T Consensus       225 ~~~~~~~~~g~~~~~  239 (239)
T PRK08703        225 ASAESKGRSGEIVYL  239 (239)
T ss_pred             hCccccCcCCeEeeC
Confidence            999999999999853

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.7e-36  Score=254.96  Aligned_cols=244  Identities=32%  Similarity=0.498  Sum_probs=214.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|.+|++|||||+++||.++++.|+++|++|+++ +|+++..+...+++...+.++.++.+|+++++++.++++.+.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999998 999888888888777666679999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+.+.+.+.+       .++||++||..+..+.+....
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~~v~~sS~~~~~~~~~~~~  154 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-------SGVIVNISSIWGLIGASCEVL  154 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEECCHhhccCCCCccH
Confidence            9999999999987666777889999999999999999999999999998765       588999999999888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+.+|++++.++++++.++. ..||++++|+||+++++.. ...... .........+..+..+++++++.+.+++++..
T Consensus       155 y~~sK~a~~~~~~~~~~~~~-~~gi~~~~v~pg~v~t~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (247)
T PRK05565        155 YSASKGAVNAFTKALAKELA-PSGIRVNAVAPGAIDTEMW-SSFSEE-DKEGLAEEIPLGRLGKPEEIAKVVLFLASDDA  231 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECCccCccc-cccChH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99999999999999999996 7899999999999976533 333222 22223334566778899999999999999989


Q ss_pred             CCccCcEEEeCCccc
Q 022335          250 KYVNGTTLIVDGGLW  264 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~  264 (299)
                      ..++|+++.+|+|+.
T Consensus       232 ~~~~g~~~~~~~~~~  246 (247)
T PRK05565        232 SYITGQIITVDGGWT  246 (247)
T ss_pred             CCccCcEEEecCCcc
Confidence            999999999999975

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-36  Score=265.22  Aligned_cols=279  Identities=19%  Similarity=0.164  Sum_probs=213.1

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHA   78 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v   78 (299)
                      |-.+-+.+..+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++...  +.++.++.+|+++.+++
T Consensus         1 ~~~~~~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv   80 (313)
T PRK05854          1 MRKPLDITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASV   80 (313)
T ss_pred             CCCCccccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHH
Confidence            3344455667899999999999999999999999999999999999999988888888654  34688999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                      +++++++.+.++++|+||||||+... +..+.+.++|+.++++|+.+++.+++.++|.|++.        .++||++||.
T Consensus        81 ~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--------~~riv~vsS~  151 (313)
T PRK05854         81 AALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--------RARVTSQSSI  151 (313)
T ss_pred             HHHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--------CCCeEEEech
Confidence            99999999999999999999998653 33456778999999999999999999999999764        3789999998


Q ss_pred             ccccc------------CCCchHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCCCC----chHHhHH
Q 022335          159 LHYTA------------SWYQIHVAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNKLA----PDEINSK  221 (299)
Q Consensus       159 ~~~~~------------~~~~~~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~~  221 (299)
                      .+..+            .+....|+.||+|+..|++.|+.++. ..+||+||+|+||+++|+.......    .......
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  231 (313)
T PRK05854        152 AARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVR  231 (313)
T ss_pred             hhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHH
Confidence            87543            24567899999999999999998652 1568999999999998764322110    0111111


Q ss_pred             HHhc-CCCC-CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc--------CCCCCCchhHHHHHhHhhhhccCC
Q 022335          222 ARDY-MPLY-KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL--------SRPRHLPKDAVKQLSRTVEKRSRD  289 (299)
Q Consensus       222 ~~~~-~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  289 (299)
                      .... .... .+.++++.+.+.++++..... .+|..+...+....        ..+...++..++++|+.+++..+.
T Consensus       232 ~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~~  308 (313)
T PRK05854        232 LIRSLSARGFLVGTVESAILPALYAATSPDA-EGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTGV  308 (313)
T ss_pred             HHHHHhhcccccCCHHHHHHHhhheeeCCCC-CCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHCC
Confidence            1110 0011 245788888888887754322 35777765532211        223356788899999999988763

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.6e-35  Score=254.17  Aligned_cols=247  Identities=34%  Similarity=0.458  Sum_probs=216.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            45689999999999999999999999999999999998888888888877667799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCCchH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~  169 (299)
                      ++|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.+++.|.+++       .++||++||..+. .+.++...
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~ii~~ss~~~~~~~~~~~~~  155 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-------GGRIVLTSSVAGPRVGYPGLAH  155 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CcEEEEEechHhhccCCCCccH
Confidence            999999999987777777888999999999999999999999999998865       5899999999888 78888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++++++.++.++. +.|+++++++||++.++..... .............|..++.+++|+|+++.++++...
T Consensus       156 y~~sK~a~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  233 (251)
T PRK12826        156 YAASKAGLVGFTRALALELA-ARNITVNSVHPGGVDTPMAGNL-GDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEA  233 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCCCCcchhhhc-CchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999996 7899999999999976643322 222212334455677788999999999999998878


Q ss_pred             CCccCcEEEeCCccccC
Q 022335          250 KYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~  266 (299)
                      .+++|+.+.++||...+
T Consensus       234 ~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        234 RYITGQTLPVDGGATLP  250 (251)
T ss_pred             cCcCCcEEEECCCccCC
Confidence            88999999999998763

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=256.77  Aligned_cols=247  Identities=25%  Similarity=0.361  Sum_probs=211.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|+++||||+++||++++++|+++|++|++++|+.+.++.+.+++.  +.++.++.+|+++.+++.++++++.++++++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            6799999999999999999999999999999999988877776662  34688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|.....++.+.+.++|...+++|+.+++.+++++.+.+.+++       .++||++||..+..+ .+...|+++
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~-~~~~~y~~s  151 (257)
T PRK07074         80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-------RGAVVNIGSVNGMAA-LGHPAYSAA  151 (257)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CeEEEEEcchhhcCC-CCCcccHHH
Confidence            999999987766777888999999999999999999999999998765       589999999766543 356789999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV  252 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  252 (299)
                      |++++.++++++.+++ ++||++++++||++.++....... ............+..++..++|+++++++|+++...++
T Consensus       152 K~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~  230 (257)
T PRK07074        152 KAGLIHYTKLLAVEYG-RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAI  230 (257)
T ss_pred             HHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCc
Confidence            9999999999999997 889999999999998765432221 22333333445677889999999999999999888899


Q ss_pred             cCcEEEeCCccccCCCCCC
Q 022335          253 NGTTLIVDGGLWLSRPRHL  271 (299)
Q Consensus       253 ~G~~i~~dgg~~~~~~~~~  271 (299)
                      +|+.+.+|||+.......+
T Consensus       231 ~g~~~~~~~g~~~~~~~~~  249 (257)
T PRK07074        231 TGVCLPVDGGLTAGNREMA  249 (257)
T ss_pred             CCcEEEeCCCcCcCChhhh
Confidence            9999999999887665443

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=253.53  Aligned_cols=239  Identities=30%  Similarity=0.397  Sum_probs=203.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++++++|||++++||+++++.|+++|++|++++|+.+.++...++.     .+.++.+|+++.++++++++.    ++
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~~   76 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----AG   76 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----hC
Confidence            356899999999999999999999999999999999987666554433     256789999999988887765    57


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|.....+..+.+.++|++.+.+|+.+++.+++++.+.+.+...      .++||++||..+..+.+....|
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~y  150 (245)
T PRK07060         77 AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR------GGSIVNVSSQAALVGLPDHLAY  150 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC------CcEEEEEccHHHcCCCCCCcHh
Confidence            8999999999877677777889999999999999999999999999876431      3799999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|++++.++++++.++. +.||++++++||+++++...................+.+++.+++|+++++++++++...
T Consensus       151 ~~sK~a~~~~~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        151 CASKAALDAITRVLCVELG-PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHh-hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccC
Confidence            9999999999999999996 789999999999998765332233333334445567788899999999999999998888


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|+.+.+|||+.+
T Consensus       230 ~~~G~~~~~~~g~~~  244 (245)
T PRK07060        230 MVSGVSLPVDGGYTA  244 (245)
T ss_pred             CccCcEEeECCCccC
Confidence            999999999999753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-35  Score=255.45  Aligned_cols=248  Identities=26%  Similarity=0.361  Sum_probs=207.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||||+++||.+++++|+++|++|++++|+. +..+...+.++..+.++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999864 44555666666556689999999999999999999999999999


Q ss_pred             cEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           93 DILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        93 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      |++|||+|....  .++.+.+.++|++.+++|+.+++.+++++.+.|.++..... ...++||++||..+..+.+....|
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~-~~~~~iv~~sS~~~~~~~~~~~~Y  160 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEE-LPHRSIVFVSSVNAIMVSPNRGEY  160 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCC-CCCcEEEEECChhhccCCCCCccc
Confidence            999999997532  45777888999999999999999999999999987642110 113679999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHH-HhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      +++|++++.++++++.++. ++||++++|+||++.++.... .. +...... ....|..++.+|+|+++++.+++++..
T Consensus       161 ~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~  237 (256)
T PRK12745        161 CISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLIKTDMTAP-VT-AKYDALIAKGLVPMPRWGEPEDVARAVAALASGDL  237 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HhCCEEEEEecCCCcCccccc-cc-hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999996 789999999999997654322 11 1222211 124577788999999999999999888


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+++|||...
T Consensus       238 ~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        238 PYSTGQAIHVDGGLSI  253 (256)
T ss_pred             cccCCCEEEECCCeec
Confidence            8899999999999876

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=4.2e-35  Score=250.91  Aligned_cols=245  Identities=33%  Similarity=0.479  Sum_probs=212.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++|+++|||++++||+++++.|+++|++|+++.|+.. ..+...+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999988887654 4566666676666789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++||++|.....+..+.+.+++++.+++|+.+++.+.+.+.+.+.+..       .++||++||..+..+.++...
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~~v~iss~~~~~~~~~~~~  154 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-------SGRIINISSVVGLMGNPGQAN  154 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CeEEEEEcccccCcCCCCCch
Confidence            9999999999987777777888899999999999999999999999998765       578999999988888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.+++.++.++. ..||++++++||+++++.. ... ............+.+++.+++|+++++.+++++..
T Consensus       155 y~~sk~a~~~~~~~~a~~~~-~~~i~~~~v~pg~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (248)
T PRK05557        155 YAASKAGVIGFTKSLARELA-SRGITVNAVAPGFIETDMT-DAL-PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEA  231 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCccCCccc-ccc-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999996 7899999999999975543 222 23333444556677788999999999999998877


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.++++||+.+
T Consensus       232 ~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        232 AYITGQTLHVNGGMVM  247 (248)
T ss_pred             CCccccEEEecCCccC
Confidence            8899999999999875

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=258.75  Aligned_cols=244  Identities=19%  Similarity=0.239  Sum_probs=206.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK-AVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |+++||||++|||++++++|+++|++|++++|+.+.++...+++...+.+ +.++.+|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47999999999999999999999999999999998888888887765544 45689999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|.....++.+.+.++|+..+++|+.+++.++++++|.|.+.+.      .++||++||..+..+.++...|+++
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~g~ii~isS~~~~~~~~~~~~Y~~s  154 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR------GGHLVNVSSAAGLVALPWHAAYSAS  154 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CcEEEEEccccccCCCCCCcchHHH
Confidence            9999999877778888999999999999999999999999999976431      4799999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----C-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----A-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |+|+.+++++++.|+. ++||++++|+||+++|+......    . .+......... ..++..+|+|+|+.++++++ .
T Consensus       155 K~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-~  231 (272)
T PRK07832        155 KFGLRGLSEVLRFDLA-RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-K  231 (272)
T ss_pred             HHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-c
Confidence            9999999999999997 88999999999999876433211    0 11111112221 23456899999999999995 4


Q ss_pred             CCCccCcEEEeCCccccCC
Q 022335          249 GKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~~  267 (299)
                      .++++|+.+..++|+++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~  250 (272)
T PRK07832        232 NRYLVYTSPDIRALYWFKR  250 (272)
T ss_pred             CCeEEecCcchHHHHHHHh
Confidence            5789999999999988744

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.2e-36  Score=260.64  Aligned_cols=267  Identities=21%  Similarity=0.203  Sum_probs=220.3

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ...++.+++++|||+++|||+++|++|+.+|++|++++|+.+..++..+++...  ..++.+++||+++.++|++++++.
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            445678999999999999999999999999999999999999999999999763  457889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--  163 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--  163 (299)
                      .+.++++|++|||||+.....  ..+.|.++.+|.+|++|++.+++.++|.|+...       .+|||++||..+...  
T Consensus       109 ~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-------~~RIV~vsS~~~~~~~~  179 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-------PSRIVNVSSILGGGKID  179 (314)
T ss_pred             HhcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCC-------CCCEEEEcCccccCccc
Confidence            999999999999999887643  556688999999999999999999999999876       489999999886110  


Q ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCC
Q 022335          164 -----------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG  232 (299)
Q Consensus       164 -----------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
                                 .....+|+.||.++..+++.|++.+. . ||.+++++||.+.++...+   .......+.........-
T Consensus       180 ~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~-~-~V~~~~~hPG~v~t~~l~r---~~~~~~~l~~~l~~~~~k  254 (314)
T KOG1208|consen  180 LKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLK-K-GVTTYSVHPGVVKTTGLSR---VNLLLRLLAKKLSWPLTK  254 (314)
T ss_pred             hhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhh-c-CceEEEECCCcccccceec---chHHHHHHHHHHHHHhcc
Confidence                       23345699999999999999999995 5 9999999999998764544   111112122222222225


Q ss_pred             CHHHHHHHHHHHcC-CCCCCccCcEEEeCCccccCCCCCCchhHHHHHhHhhhhccCC
Q 022335          233 EKWDIAMAALYLTS-DTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRD  289 (299)
Q Consensus       233 ~~~dva~~~~~l~s-~~~~~~~G~~i~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (299)
                      +++.-|++.++.+- +.-...+|.. .-|+......+.+.++...+++|+.++++...
T Consensus       255 s~~~ga~t~~~~a~~p~~~~~sg~y-~~d~~~~~~~~~a~d~~~~~~lw~~s~~l~~~  311 (314)
T KOG1208|consen  255 SPEQGAATTCYAALSPELEGVSGKY-FEDCAIAEPSEEALDEELAEKLWKFSEELIDE  311 (314)
T ss_pred             CHHHHhhheehhccCccccCccccc-cccccccccccccCCHHHHHHHHHHHHHHhhh
Confidence            78899999888774 4556677777 66777777778999999999999999988765

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-35  Score=257.17  Aligned_cols=221  Identities=25%  Similarity=0.277  Sum_probs=189.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++|+++||||++|||++++++|+++|++|++++|+.++++.+.    .  .++.++.+|+++.++++++++++.+.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999987665432    2  247889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |+||||||+....++.+.+.++++..+++|+.+++.+++.++|.|++..       .++||++||..+..+.+....|++
T Consensus        76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~  148 (273)
T PRK06182         76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-------SGRIINISSMGGKIYTPLGAWYHA  148 (273)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-------CCEEEEEcchhhcCCCCCccHhHH
Confidence            9999999998778888999999999999999999999999999998875       689999999988888888889999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---C----C---chH----HhHHHHhcCCCCCCCCHHHHH
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---L----A---PDE----INSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---~----~---~~~----~~~~~~~~~~~~~~~~~~dva  238 (299)
                      +|+++++|+++++.|+. ++||++++|+||+++|+.....   +    .   ..+    ..+.+....+.+++.+|+|+|
T Consensus       149 sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA  227 (273)
T PRK06182        149 TKFALEGFSDALRLEVA-PFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIA  227 (273)
T ss_pred             HHHHHHHHHHHHHHHhc-ccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHH
Confidence            99999999999999996 8899999999999987643110   0    0   001    112334445677889999999


Q ss_pred             HHHHHHcCC
Q 022335          239 MAALYLTSD  247 (299)
Q Consensus       239 ~~~~~l~s~  247 (299)
                      ++++++++.
T Consensus       228 ~~i~~~~~~  236 (273)
T PRK06182        228 DAISKAVTA  236 (273)
T ss_pred             HHHHHHHhC
Confidence            999999974

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=7.4e-35  Score=259.51  Aligned_cols=272  Identities=18%  Similarity=0.121  Sum_probs=208.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.++++.+.+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            45689999999999999999999999999999999999988888887754455789999999999999999999887778


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-------
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-------  162 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-------  162 (299)
                      ++|+||||||+... ....+.+.++|+.++++|+.+++.++++++|.|++.+..     .++||++||..+..       
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----~~riV~vsS~~~~~~~~~~~~  157 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP-----DPRLVILGTVTANPKELGGKI  157 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-----CceEEEEcccccCccccCCcc
Confidence            99999999997543 233466889999999999999999999999999876411     26999999975421       


Q ss_pred             ----------------------------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC
Q 022335          163 ----------------------------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA  214 (299)
Q Consensus       163 ----------------------------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~  214 (299)
                                                  +......|+.||++...+++.+++++...+||++++++||+|.++.+.+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~  237 (322)
T PRK07453        158 PIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTP  237 (322)
T ss_pred             CCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCC
Confidence                                        1123468999999999999999999943569999999999995343332221


Q ss_pred             ch--HHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc--------ccCCCCCCchhHHHHHhHhhh
Q 022335          215 PD--EINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL--------WLSRPRHLPKDAVKQLSRTVE  284 (299)
Q Consensus       215 ~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~--------~~~~~~~~~~~~~~~~~~~~~  284 (299)
                      ..  .....+ .........+++..+..+++++.+.....+|..+..+...        ....+.+.++...++||+.++
T Consensus       238 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw~~s~  316 (322)
T PRK07453        238 PLFQKLFPWF-QKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLWDLSA  316 (322)
T ss_pred             HHHHHHHHHH-HHHHhhceecHHHHhhHHHHhhcCcccCCCCceeecCCCCCcCccccccccchhhcCHHHHHHHHHHHH
Confidence            11  111111 1111223467788888888877655445689888732211        134566778899999999998


Q ss_pred             hccC
Q 022335          285 KRSR  288 (299)
Q Consensus       285 ~~~~  288 (299)
                      +..+
T Consensus       317 ~~~~  320 (322)
T PRK07453        317 KLVG  320 (322)
T ss_pred             HHhC
Confidence            8764

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-35  Score=248.99  Aligned_cols=232  Identities=26%  Similarity=0.304  Sum_probs=199.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++|+++||||+++||++++++|+++|++|++++|+++..+.+.+++.+.+.++.++.+|+++.+++.++++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999999988888888887767789999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |++|||+|.....++.+.+.++++..+++|+.+++.+++.++++|.+.+       .++||++||..+..+.+++..|++
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~  157 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-------GGLIINVSSIAARNAFPQWGAYCV  157 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-------CcEEEEEccHHhCcCCCCccHHHH
Confidence            9999999987777778888999999999999999999999999998865       689999999999989899999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV  252 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  252 (299)
                      +|++++.++++++.++. ++||++++|.||+++|+........        ......+..+++|+|+++++++++....+
T Consensus       158 sK~~~~~~~~~~a~e~~-~~gi~v~~i~pg~i~t~~~~~~~~~--------~~~~~~~~~~~~~va~~~~~l~~~~~~~~  228 (241)
T PRK07454        158 SKAALAAFTKCLAEEER-SHGIRVCTITLGAVNTPLWDTETVQ--------ADFDRSAMLSPEQVAQTILHLAQLPPSAV  228 (241)
T ss_pred             HHHHHHHHHHHHHHHhh-hhCCEEEEEecCcccCCcccccccc--------cccccccCCCHHHHHHHHHHHHcCCccce
Confidence            99999999999999996 8899999999999987643211100        01112356899999999999998765544


Q ss_pred             cC-cEEEeC
Q 022335          253 NG-TTLIVD  260 (299)
Q Consensus       253 ~G-~~i~~d  260 (299)
                      .+ -++..+
T Consensus       229 ~~~~~~~~~  237 (241)
T PRK07454        229 IEDLTLMPS  237 (241)
T ss_pred             eeeEEeecC
Confidence            44 344333

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-35  Score=258.69  Aligned_cols=269  Identities=19%  Similarity=0.196  Sum_probs=209.4

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      +..+.++++|+++||||++|||+++|++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++.++++++++
T Consensus         8 ~~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~   87 (306)
T PRK06197          8 AADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAAD   87 (306)
T ss_pred             ccccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            33456789999999999999999999999999999999999998887777777543  3568899999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-  162 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-  162 (299)
                      ++.+.++++|+||||||+....  ...+.++++..+++|+.+++.+++.++|.|++..       .++||++||..+.. 
T Consensus        88 ~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-------~~~iV~vSS~~~~~~  158 (306)
T PRK06197         88 ALRAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-------GSRVVTVSSGGHRIR  158 (306)
T ss_pred             HHHhhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-------CCEEEEECCHHHhcc
Confidence            9999999999999999976432  3456678899999999999999999999998765       58999999986543 


Q ss_pred             ------------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEE--eCCccCCCCCCCCCCchHHhHHHHhcCCC
Q 022335          163 ------------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGI--APGPIGDTPGMNKLAPDEINSKARDYMPL  228 (299)
Q Consensus       163 ------------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  228 (299)
                                  +.+....|++||+|++.|++.++.+++ ++|++++++  +||+++|+.. ...+.. ....+....+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~-~~~i~v~~v~~~PG~v~T~~~-~~~~~~-~~~~~~~~~~~  235 (306)
T PRK06197        159 AAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA-AAGATTIAVAAHPGVSNTELA-RNLPRA-LRPVATVLAPL  235 (306)
T ss_pred             CCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh-cCCCCeEEEEeCCCcccCccc-ccCcHH-HHHHHHHHHhh
Confidence                        234567899999999999999999996 778777655  7999986643 333221 11111111121


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc--------CCCCCCchhHHHHHhHhhhhccC
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL--------SRPRHLPKDAVKQLSRTVEKRSR  288 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~--------~~~~~~~~~~~~~~~~~~~~~~~  288 (299)
                       ...++++.+..+++++.. ....+|..+..+|+...        .++...++....++|+.+++..+
T Consensus       236 -~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~  301 (306)
T PRK06197        236 -LAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTG  301 (306)
T ss_pred             -hcCCHHHHHHHHHHHhcC-CCcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHC
Confidence             135677777777776653 34568998887765422        23456678899999999999887

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-35  Score=248.83  Aligned_cols=231  Identities=25%  Similarity=0.347  Sum_probs=197.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+|+++||||+++||++++++|+++|++|++++|+.+.         ..  ...++.+|+++.++++++++++.+.+ ++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   69 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------DF--PGELFACDLADIEQTAATLAQINEIH-PV   69 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------cc--CceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence            47899999999999999999999999999999998753         11  12578999999999999999988876 68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |++|||+|.....++.+.+.++|++.+++|+.+++.+.+.++|.|++..       .++||++||.. ..+.+....|++
T Consensus        70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~-~~~~~~~~~Y~~  141 (234)
T PRK07577         70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-------QGRIVNICSRA-IFGALDRTSYSA  141 (234)
T ss_pred             cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEEcccc-ccCCCCchHHHH
Confidence            9999999987777788888999999999999999999999999998865       58999999985 446677899999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +|+++++++++++.++. ++||++++|+||+++++....... ............+..+..+|+|+|..+++++++...+
T Consensus       142 sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  220 (234)
T PRK07577        142 AKSALVGCTRTWALELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGF  220 (234)
T ss_pred             HHHHHHHHHHHHHHHHH-hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence            99999999999999997 789999999999998765332211 1222233444567777889999999999999988889


Q ss_pred             ccCcEEEeCCccc
Q 022335          252 VNGTTLIVDGGLW  264 (299)
Q Consensus       252 ~~G~~i~~dgg~~  264 (299)
                      ++|+.+.+|||..
T Consensus       221 ~~g~~~~~~g~~~  233 (234)
T PRK07577        221 ITGQVLGVDGGGS  233 (234)
T ss_pred             ccceEEEecCCcc
Confidence            9999999999865

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=256.47  Aligned_cols=240  Identities=24%  Similarity=0.275  Sum_probs=200.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+|++|||||+++||++++++|+++|++|++++|+.+.++.+.+.+   +.++.++++|++++++++++++++.+.++++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999987766654433   4468889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |++|||+|+....++.+.+.++|++++++|+.+++.+++.++|.|+++.       .++||++||..+..+.++...|++
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~vsS~~~~~~~~~~~~Y~~  151 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-------SGHIIQISSIGGISAFPMSGIYHA  151 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CCEEEEEcChhhcCCCCCccHHHH
Confidence            9999999998878888999999999999999999999999999998865       579999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-------chHHhHHHHhcCCCCCC-CCHHHHHHHHHHH
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-------PDEINSKARDYMPLYKL-GEKWDIAMAALYL  244 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l  244 (299)
                      +|++++.+++.++.++. ++||++++|+||+++|+.......       .+..........+..++ .+|+|+++.++++
T Consensus       152 sKaa~~~~~~~la~e~~-~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l  230 (275)
T PRK08263        152 SKWALEGMSEALAQEVA-EFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKL  230 (275)
T ss_pred             HHHHHHHHHHHHHHHhh-hhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence            99999999999999996 889999999999998765422111       11122233334455666 8999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +....  ..++++...+...+
T Consensus       231 ~~~~~--~~~~~~~~~~~~~~  249 (275)
T PRK08263        231 VDAEN--PPLRLFLGSGVLDL  249 (275)
T ss_pred             HcCCC--CCeEEEeCchHHHH
Confidence            97542  35566655554444

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-34  Score=248.28  Aligned_cols=243  Identities=27%  Similarity=0.402  Sum_probs=206.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++|||||+++||++++++|+++|++|++ ..|+.+..++...++...+.++.++++|++++++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            58999999999999999999999999876 46777777777777776667789999999999999999999999999999


Q ss_pred             EEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-chHHH
Q 022335           94 ILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHVA  171 (299)
Q Consensus        94 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~Y~  171 (299)
                      ++|||+|... ..++.+.+.++|+..+++|+.+++.+++.+++.|.+.....    .++||++||..+..+.+. +..|+
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~----~g~~v~~sS~~~~~~~~~~~~~Y~  157 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGS----GGAIVNVSSAASRLGAPGEYVDYA  157 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC----CcEEEEECchhhccCCCCcccchH
Confidence            9999999753 35677888999999999999999999999999998753211    478999999988887775 46899


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      ++|++++.++++++.++. ++||++++++||++.++..... ..+..........|..+..+++|+|+++++++++...+
T Consensus       158 ~sK~~~~~~~~~l~~~~~-~~~i~v~~i~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~  235 (247)
T PRK09730        158 ASKGAIDTLTTGLSLEVA-AQGIRVNCVRPGFIYTEMHASG-GEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASY  235 (247)
T ss_pred             hHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCCCcCcccccC-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcC
Confidence            999999999999999997 7899999999999987643322 22233333445567777789999999999999988888


Q ss_pred             ccCcEEEeCCcc
Q 022335          252 VNGTTLIVDGGL  263 (299)
Q Consensus       252 ~~G~~i~~dgg~  263 (299)
                      ++|+.+.+|||.
T Consensus       236 ~~g~~~~~~g~~  247 (247)
T PRK09730        236 VTGSFIDLAGGK  247 (247)
T ss_pred             ccCcEEecCCCC
Confidence            999999999973

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-35  Score=254.95  Aligned_cols=214  Identities=23%  Similarity=0.223  Sum_probs=189.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++++++|||||++|||++++++|+++|++|++++|+++.++...+++.    ++.++.+|++++++++++++++.+.+++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            558999999999999999999999999999999999988777666553    5788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|++|||+|+....++.+.+.+++++++++|+.+++.+++.++|.|.+++       .++||++||..+..+.++...|+
T Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~  151 (273)
T PRK07825         79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-------RGHVVNVASLAGKIPVPGMATYC  151 (273)
T ss_pred             CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCEEEEEcCccccCCCCCCcchH
Confidence            99999999998778888889999999999999999999999999999876       68999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      +||+++.+++++++.++. ++||++++|+||+++|+..... .          ........+|+|+|+.++.++...
T Consensus       152 asKaa~~~~~~~l~~el~-~~gi~v~~v~Pg~v~t~~~~~~-~----------~~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        152 ASKHAVVGFTDAARLELR-GTGVHVSVVLPSFVNTELIAGT-G----------GAKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCcCcchhhccc-c----------cccCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999996 8899999999999976543211 0          011123579999999999988654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.6e-34  Score=247.02  Aligned_cols=245  Identities=34%  Similarity=0.489  Sum_probs=215.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|.++++|||||+++||.+++++|+++|++|++++|+++..+...+++...+.++.++.+|+++++++.++++++...++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999999999999888888888877778899999999999999999999999899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++||++|.....+..+.+.+++++.++.|+.+++++++++.++|.+..       .++||++||..+..+......|
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-------~~~ii~~ss~~~~~~~~~~~~y  154 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-------YGRIVNISSVSGVTGNPGQTNY  154 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEECcHHhccCCCCCcHh
Confidence            999999999987666777788999999999999999999999999998765       5799999999888888888999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +.+|++++.++++++.++. +.|+++++|+||.+.++.. ... .....+......+...+.+++|+++.+.+++++...
T Consensus       155 ~~sk~~~~~~~~~l~~~~~-~~~i~~~~i~pg~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  231 (246)
T PRK05653        155 SAAKAGVIGFTKALALELA-SRGITVNAVAPGFIDTDMT-EGL-PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAAS  231 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHh-hcCeEEEEEEeCCcCCcch-hhh-hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999996 7899999999999976533 211 223334445566777889999999999999988888


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      .++|+.+.++||..+
T Consensus       232 ~~~g~~~~~~gg~~~  246 (246)
T PRK05653        232 YITGQVIPVNGGMYM  246 (246)
T ss_pred             CccCCEEEeCCCeeC
Confidence            899999999999753

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-35  Score=255.23  Aligned_cols=225  Identities=21%  Similarity=0.218  Sum_probs=194.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++++||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|++++++++++++++.++++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999999888888888877778999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      ||||+|+.....+.+.+.++|++.+++|+.+++.+++.++|.|.+.+       .++||++||..+..+.++...|+++|
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~vsS~~~~~~~~~~~~Y~~sK  153 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-------SGRIVNIASMAGLMQGPAMSSYNVAK  153 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-------CCEEEEECChhhcCCCCCchHHHHHH
Confidence            99999988777888899999999999999999999999999998865       58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      +++++++++++.|+. +.||++++|+||+++|+.........................+++|+|+.++..+..
T Consensus       154 aa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        154 AGVVALSETLLVELA-DDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHHHHHHhc-ccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            999999999999996 889999999999998764432211111111111111122357999999999998864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-34  Score=248.85  Aligned_cols=244  Identities=25%  Similarity=0.361  Sum_probs=203.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .++++++|||||+++||++++++|+++|++|+++.+ +.+........++..+.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999888765 4455555556666666678899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.+.|++         .++||++||..+..+.++...
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~  153 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---------GGAIVNIASVAGIRPAYGLSI  153 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---------CcEEEEEcchhccCCCCCchH
Confidence            99999999999877777778888999999999999999999999999864         478999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |+++|+++++++++++.++. + +|+++++.||+++++.......  ............+.+++.+|+|+|++++++++.
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~-~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  231 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELA-P-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI  231 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-c-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999999996 6 9999999999997664321110  000111112334556789999999999999963


Q ss_pred             CCCCccCcEEEeCCccccCC
Q 022335          248 TGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~~~  267 (299)
                        ...+|+.+++++|+.+-.
T Consensus       232 --~~~~g~~~~i~~g~~~~~  249 (252)
T PRK06077        232 --ESITGQVFVLDSGESLKG  249 (252)
T ss_pred             --cccCCCeEEecCCeeccC
Confidence              457999999999988754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.3e-35  Score=272.39  Aligned_cols=240  Identities=25%  Similarity=0.330  Sum_probs=203.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++++|||||++|||+++++.|+++|++|+++++..  +.++++.++   .+  ..++.+|+++.++++++++.+.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~---~~--~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR---VG--GTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH---cC--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999998853  223333222   22  457899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|++|||+|+.....+.+.+.++|+.++++|+.+++++.+++.+.+..+.       .++||++||..+..+.+++.
T Consensus       282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~g~iv~~SS~~~~~g~~~~~  354 (450)
T PRK08261        282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-------GGRIVGVSSISGIAGNRGQT  354 (450)
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-------CCEEEEECChhhcCCCCCCh
Confidence            99999999999988777888899999999999999999999999999765443       68999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|+++|+++++|+++++.++. ++||++|+|+||+++|++. ..++. ...+......++.+...|+|+++++.||+++.
T Consensus       355 ~Y~asKaal~~~~~~la~el~-~~gi~v~~v~PG~i~t~~~-~~~~~-~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~  431 (450)
T PRK08261        355 NYAASKAGVIGLVQALAPLLA-ERGITINAVAPGFIETQMT-AAIPF-ATREAGRRMNSLQQGGLPVDVAETIAWLASPA  431 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeCcCcchhh-hccch-hHHHHHhhcCCcCCCCCHHHHHHHHHHHhChh
Confidence            999999999999999999997 8899999999999976533 22221 11122233456677789999999999999999


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      ..++||++|.+|||..+
T Consensus       432 ~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        432 SGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             hcCCCCCEEEECCCccc
Confidence            99999999999998765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=9e-37  Score=245.70  Aligned_cols=234  Identities=25%  Similarity=0.308  Sum_probs=194.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++.||.+++||+.+|||++++++|+++|..+.++..+.+..+.. .++++.  ...+.|++||+++..++++.++++..+
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            56799999999999999999999999999988888877764443 445444  346889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +|.+|++||+||+..        +.+|+.++++|+.|.++.+...+|+|.++.-+.    +|-|||+||..|..|.+...
T Consensus        81 fg~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~----GGiIvNmsSv~GL~P~p~~p  148 (261)
T KOG4169|consen   81 FGTIDILINGAGILD--------DKDWERTINVNLTGVINGTQLALPYMDKKQGGK----GGIIVNMSSVAGLDPMPVFP  148 (261)
T ss_pred             hCceEEEEccccccc--------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCC----CcEEEEeccccccCccccch
Confidence            999999999999874        466999999999999999999999999976333    78999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCC------CCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGM------NKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +|++||+++.+|+|+|+...- .+.||+++++|||++.|+...      ..+...+......+..+   ..+|.+++..+
T Consensus       149 VY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~---~q~~~~~a~~~  225 (261)
T KOG4169|consen  149 VYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP---KQSPACCAINI  225 (261)
T ss_pred             hhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc---cCCHHHHHHHH
Confidence            999999999999999988631 256999999999999765321      11222233333333333   46888999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +..+..   ..+|+.+.+|.|.
T Consensus       226 v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  226 VNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHhh---ccCCcEEEEecCc
Confidence            888844   5899999999887

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-34  Score=245.43  Aligned_cols=244  Identities=32%  Similarity=0.465  Sum_probs=209.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++.|++|||||+|+||++++++|+++|++|+++.|+. ...+...+.+...+.++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999987766554 445556666666677899999999999999999999999899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++||++|......+.+.+.+++++.+++|+.+++++++.+++++++..       .+++|++||..+..+.++...|
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~~i~~SS~~~~~~~~~~~~y  156 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-------GGRIVNISSVAGLPGWPGRSNY  156 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CCEEEEECccccCCCCCCchHH
Confidence            999999999987777777888999999999999999999999999998865       5799999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +.+|++++++++.++.++. ++||+++.++||++.++...... ....... ....+.+++.+++|+++.+.+++++...
T Consensus       157 ~~sK~~~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~  233 (249)
T PRK12825        157 AAAKAGLVGLTKALARELA-EYGITVNMVAPGDIDTDMKEATI-EEAREAK-DAETPLGRSGTPEDIARAVAFLCSDASD  233 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCccCCcccccc-chhHHhh-hccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999996 78999999999999876543322 2222111 2246777789999999999999988778


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      ..+|++++++||+.+
T Consensus       234 ~~~g~~~~i~~g~~~  248 (249)
T PRK12825        234 YITGQVIEVTGGVDV  248 (249)
T ss_pred             CcCCCEEEeCCCEee
Confidence            899999999999764

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-35  Score=255.94  Aligned_cols=222  Identities=23%  Similarity=0.273  Sum_probs=189.9

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +++...+++++++||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|+++.+++.++++++
T Consensus        32 ~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            44455678999999999999999999999999999999999999888888888776778889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCC--CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDL--SPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-  162 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-  162 (299)
                      .+.++++|++|||||+....++.+.  +.++++..+++|+.+++.++++++|+|++..       .++||++||..+.. 
T Consensus       112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~  184 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-------DGHIINVATWGVLSE  184 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CcEEEEECChhhcCC
Confidence            9999999999999998766555442  4678999999999999999999999998876       68999999976654 


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.++...|++||+|+++|+++++.|+. ++||++++|+||+++|++......          ... ....+|+++|+.++
T Consensus       185 ~~p~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~pg~v~T~~~~~~~~----------~~~-~~~~~pe~vA~~~~  252 (293)
T PRK05866        185 ASPLFSVYNASKAALSAVSRVIETEWG-DRGVHSTTLYYPLVATPMIAPTKA----------YDG-LPALTADEAAEWMV  252 (293)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEcCcccCcccccccc----------ccC-CCCCCHHHHHHHHH
Confidence            367788999999999999999999996 889999999999998765421100          001 12468999999998


Q ss_pred             HHcC
Q 022335          243 YLTS  246 (299)
Q Consensus       243 ~l~s  246 (299)
                      ..+.
T Consensus       253 ~~~~  256 (293)
T PRK05866        253 TAAR  256 (293)
T ss_pred             HHHh
Confidence            8885

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-34  Score=280.08  Aligned_cols=253  Identities=30%  Similarity=0.382  Sum_probs=220.3

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +...+.||++|||||+|+||+++++.|+++|++|++++|+.+.++...+++... .++.++.+|++++++++++++++.+
T Consensus       416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~  494 (681)
T PRK08324        416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAAL  494 (681)
T ss_pred             CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            344578999999999999999999999999999999999998888877777544 5788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .+|++|++|||||+....++.+.+.++|+..+++|+.+++.+++.+.+.|++++.      +++||++||..+..+.++.
T Consensus       495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~------~g~iV~vsS~~~~~~~~~~  568 (681)
T PRK08324        495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL------GGSIVFIASKNAVNPGPNF  568 (681)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CcEEEEECCccccCCCCCc
Confidence            9999999999999988888888999999999999999999999999999988641      3899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc--CCCCCCCC----------CCchHHhHHHHhcCCCCCCCCHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI--GDTPGMNK----------LAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v--~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      ..|+++|++++.++++++.+++ ++||++|+|+||++  .+......          +..++..+.+....+++++.+++
T Consensus       569 ~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~  647 (681)
T PRK08324        569 GAYGAAKAAELHLVRQLALELG-PDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPE  647 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHH
Confidence            9999999999999999999997 88999999999999  55432221          12223334456677888899999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCccccCCC
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      |+|+++++++++...+.+|+.+++|||.....+
T Consensus       648 DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~~~~  680 (681)
T PRK08324        648 DVAEAVVFLASGLLSKTTGAIITVDGGNAAAFL  680 (681)
T ss_pred             HHHHHHHHHhCccccCCcCCEEEECCCchhccc
Confidence            999999999987778899999999999876543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-34  Score=246.66  Aligned_cols=235  Identities=26%  Similarity=0.358  Sum_probs=203.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCC--CHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVR--RQEHAKKVVEST   85 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~--~~~~v~~~~~~~   85 (299)
                      ...+++|+++|||++++||.+++++|+++|++|++++|+.+..+...+++.+.+ .++.++.+|++  +.++++++++.+
T Consensus         7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          7 PDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999988888888886654 45777888886  789999999999


Q ss_pred             HHHcCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           86 FEHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      .+.++++|+||||||.... .++.+.+.++|++.+++|+.+++.++++++++|.+++       .++||++||..+..+.
T Consensus        87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-------~~~iv~~ss~~~~~~~  159 (247)
T PRK08945         87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-------AASLVFTSSSVGRQGR  159 (247)
T ss_pred             HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-------CCEEEEEccHhhcCCC
Confidence            9999999999999997544 5667788899999999999999999999999999876       6899999999999888


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+++++++++++.++. ..||++++++||+++++.....+...          ...++.+|+|+++++.++
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~  228 (247)
T PRK08945        160 ANWGAYAVSKFATEGMMQVLADEYQ-GTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYL  228 (247)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHH
Confidence            8999999999999999999999996 78999999999999765322222111          123578999999999999


Q ss_pred             cCCCCCCccCcEEEeCC
Q 022335          245 TSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dg  261 (299)
                      +++...+++|+.+..--
T Consensus       229 ~~~~~~~~~g~~~~~~~  245 (247)
T PRK08945        229 MGDDSRRKNGQSFDAQP  245 (247)
T ss_pred             hCccccccCCeEEeCCC
Confidence            99988999999987543

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.9e-35  Score=277.95  Aligned_cols=231  Identities=23%  Similarity=0.285  Sum_probs=198.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++++++|||||++|||++++++|+++|++|++++|+.+.++++.++++..+.++.++.+|++++++++++++++.+.+|
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999999999998888887777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|+.++++|+.|+++++++++|.|.+++.      +|+||++||..+..+.++...|
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~~~~~~~Y  465 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT------GGHIVNVASAAAYAPSRSLPAY  465 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CcEEEEECChhhccCCCCCcHH
Confidence            9999999999987788888999999999999999999999999999988642      4899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----CchH--HhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----APDE--INSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++||+|+++++++++.|+. ++||+|++|+||+++|++.....    ..+.  ............+..+|+++|+.+++.
T Consensus       466 ~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~  544 (582)
T PRK05855        466 ATSKAAVLMLSECLRAELA-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDA  544 (582)
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHH
Confidence            9999999999999999997 88999999999999876533221    1111  011111122223456899999999999


Q ss_pred             cCCC
Q 022335          245 TSDT  248 (299)
Q Consensus       245 ~s~~  248 (299)
                      ++..
T Consensus       545 ~~~~  548 (582)
T PRK05855        545 VKRN  548 (582)
T ss_pred             HHcC
Confidence            9643

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=247.84  Aligned_cols=247  Identities=30%  Similarity=0.446  Sum_probs=209.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++++++|||||+++||++++++|+++|++|++++|+++..+.+.++....  ++.++.+|+++++++.++++++.+.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999988777666555432  67889999999999999999999999


Q ss_pred             CCccEEEEcCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|+|||++|.. ........+.++|.+.+++|+.+++.+++.+++.+...+.      ++.|+++||..+..+.+...
T Consensus        85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~vv~~ss~~~~~~~~~~~  158 (264)
T PRK12829         85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH------GGVIIALSSVAGRLGYPGRT  158 (264)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CeEEEEecccccccCCCCCc
Confidence            9999999999987 4466677888999999999999999999999999887541      26899999998888888889


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchHHhHHHHhcCCCCCCCCHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDEINSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~  239 (299)
                      .|+.+|++++.+++.++.++. ..++++++|+||++.++......         .............+.+++.+++|+++
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~-~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  237 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELG-PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAA  237 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHH
Confidence            999999999999999999996 78999999999999765432111         11122233344557778899999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++.+++++....++|+.++++||.+.
T Consensus       238 ~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        238 TALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             HHHHHcCccccCccCcEEEeCCCccc
Confidence            99999987777899999999999764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.1e-34  Score=233.90  Aligned_cols=248  Identities=26%  Similarity=0.286  Sum_probs=219.1

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..|+||++||+|-.  +.|++.||+.|.++|+.+.++..++ +++.-.+++.+.-+.-.+++||+++.++++++++++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            46889999999985  7899999999999999999999887 55665555655444467799999999999999999999


Q ss_pred             HcCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           88 HFGKLDILVNAAAGNF----LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      ++|++|+|||+.++..    .+++.+.+.+.|...+++...+...+.+++.|+|..         +|+||-++-..+.+.
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---------ggSiltLtYlgs~r~  151 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---------GGSILTLTYLGSERV  151 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---------CCcEEEEEeccceee
Confidence            9999999999999765    256778899999999999999999999999999976         689999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .|.|...+.+|++|++-+|-||.+++ ++|||||+|+-|+++|-....-.......+......|+++..++|||+++.+|
T Consensus       152 vPnYNvMGvAKAaLEasvRyLA~dlG-~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~f  230 (259)
T COG0623         152 VPNYNVMGVAKAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAF  230 (259)
T ss_pred             cCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHH
Confidence            99999999999999999999999998 88999999999999754322222345666778888999999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccCCC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      |+|+-++.+||+++.+|+|+.+...
T Consensus       231 LlSdLssgiTGei~yVD~G~~i~~m  255 (259)
T COG0623         231 LLSDLSSGITGEIIYVDSGYHIMGM  255 (259)
T ss_pred             HhcchhcccccceEEEcCCceeecc
Confidence            9999999999999999999998653

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=244.94  Aligned_cols=235  Identities=29%  Similarity=0.365  Sum_probs=203.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++||||++++||++++++|+++|++|++++|++++.++..+++...  .+.++.+|+++.++++++++++.+.++
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999999999987776666666443  366778999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++||++|......+.+.+.+++++.+++|+.+++.+++++.+.|.++.       .++||++||..+..+.++...|
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~y  154 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-------GGRIVNIGAGAALKAGPGMGAY  154 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-------CCEEEEECchHhccCCCCcchh
Confidence            999999999987666677778999999999999999999999999998765       6899999999999888889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|++++.+++.++.++. ++||+++.+.||++.++........          .....+.+++|+++++.+++++...
T Consensus       155 ~~sk~a~~~~~~~~a~~~~-~~~i~~~~i~pg~v~~~~~~~~~~~----------~~~~~~~~~~dva~~~~~~l~~~~~  223 (239)
T PRK12828        155 AAAKAGVARLTEALAAELL-DRGITVNAVLPSIIDTPPNRADMPD----------ADFSRWVTPEQIAAVIAFLLSDEAQ  223 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCcchhhcCCc----------hhhhcCCCHHHHHHHHHHHhCcccc
Confidence            9999999999999999996 7899999999999976532211111          1223467899999999999988777


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|+.+.++||+.+
T Consensus       224 ~~~g~~~~~~g~~~~  238 (239)
T PRK12828        224 AITGASIPVDGGVAL  238 (239)
T ss_pred             cccceEEEecCCEeC
Confidence            899999999999864

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-34  Score=249.30  Aligned_cols=225  Identities=21%  Similarity=0.198  Sum_probs=189.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .++++|||||+||||++++++|+++|++|++++|+.+.++.+.+.   .+.++.++.+|+++++++.++++.+.+.++++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999998776554332   24568889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++..       .++||++||..+..+.++...|++
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~iv~iSS~~~~~~~~~~~~Y~~  152 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-------RGHIVNITSMGGLITMPGIGYYCG  152 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-------CCEEEEEecccccCCCCCcchhHH
Confidence            9999999987777888889999999999999999999999999998865       589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-----chHHhH------HHHhcCCCCCCCCHHHHHHHH
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-----PDEINS------KARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +|++++.++++++.+++ +.||++++|+||++.|++....+.     .++...      ......+..++.+|+|+|+++
T Consensus       153 sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (277)
T PRK06180        153 SKFALEGISESLAKEVA-PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAI  231 (277)
T ss_pred             HHHHHHHHHHHHHHHhh-hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHH
Confidence            99999999999999996 789999999999998754322111     111111      111223445678999999999


Q ss_pred             HHHcCCC
Q 022335          242 LYLTSDT  248 (299)
Q Consensus       242 ~~l~s~~  248 (299)
                      ++++...
T Consensus       232 ~~~l~~~  238 (277)
T PRK06180        232 LAAVESD  238 (277)
T ss_pred             HHHHcCC
Confidence            9998654

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=249.23  Aligned_cols=213  Identities=22%  Similarity=0.249  Sum_probs=184.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.+|+++++++.++++++.++++++|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4689999999999999999999999999999999988877777665433 789999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCC-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           94 ILVNAAAGNFLVSAE-DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      ++|||+|+....... +.+.++++.++++|+.+++.+++.++|.|++..       .++||++||..+..+.+....|++
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~a  153 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-------RGTLVGIASVAGVRGLPGAGAYSA  153 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-------CCEEEEEechhhcCCCCCCcchHH
Confidence            999999986543333 367899999999999999999999999998876       689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ||++++.++++++.|+. ++||++++|+||+++|+.... .           ..+.....+|+++++.++..+..
T Consensus       154 sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-----------~~~~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        154 SKAAAIKYLESLRVELR-PAGVRVVTIAPGYIRTPMTAH-N-----------PYPMPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             HHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCcCchhhc-C-----------CCCCCCccCHHHHHHHHHHHHhC
Confidence            99999999999999996 889999999999998653211 0           01112346899999999998864

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.8e-34  Score=256.20  Aligned_cols=211  Identities=19%  Similarity=0.230  Sum_probs=175.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++++||||++|||+++|++|+++|++|++++|+++.++++.+++.+.  +.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            5999999999999999999999999999999999999999998888754  3468889999985  23334444444444


Q ss_pred             --CccEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-c-C
Q 022335           91 --KLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-A-S  164 (299)
Q Consensus        91 --~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~-~  164 (299)
                        ++|++|||||+...  ..+.+.+.+++++++++|+.+++.++++++|.|.+++       .|+||++||..+.. + .
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-------~g~IV~iSS~a~~~~~~~  202 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-------KGAIINIGSGAAIVIPSD  202 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-------CcEEEEEechhhccCCCC
Confidence              46699999998653  4577889999999999999999999999999998876       68999999998864 3 5


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++|+.|++ ++||+|++|+||+++|++....  .          .. ....+|+++|+.++..
T Consensus       203 p~~~~Y~aSKaal~~~~~~L~~El~-~~gI~V~~v~PG~v~T~~~~~~--~----------~~-~~~~~p~~~A~~~~~~  268 (320)
T PLN02780        203 PLYAVYAATKAYIDQFSRCLYVEYK-KSGIDVQCQVPLYVATKMASIR--R----------SS-FLVPSSDGYARAALRW  268 (320)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHh-ccCeEEEEEeeCceecCccccc--C----------CC-CCCCCHHHHHHHHHHH
Confidence            7899999999999999999999997 8899999999999987643210  0          01 1136899999999888


Q ss_pred             cC
Q 022335          245 TS  246 (299)
Q Consensus       245 ~s  246 (299)
                      +.
T Consensus       269 ~~  270 (320)
T PLN02780        269 VG  270 (320)
T ss_pred             hC
Confidence            84

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-34  Score=243.32  Aligned_cols=227  Identities=27%  Similarity=0.399  Sum_probs=191.8

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022335           18 LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVN   97 (299)
Q Consensus        18 lItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~   97 (299)
                      |||||+++||++++++|+++|++|++++|+.+.++...+++++ +.++.++.+|+++++++++++++    ++++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence            6999999999999999999999999999998877777666642 56788999999999999888775    478999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHHHH
Q 022335           98 AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAV  177 (299)
Q Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKaal  177 (299)
                      |+|.....++.+.+.+++++++++|+.+++++++  .+.|.  .       .++||++||..+..+.+....|+++|+++
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~-------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~  144 (230)
T PRK07041         76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--P-------GGSLTFVSGFAAVRPSASGVLQGAINAAL  144 (230)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--C-------CeEEEEECchhhcCCCCcchHHHHHHHHH
Confidence            9998777778888999999999999999999999  44442  2       58999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCc
Q 022335          178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGT  255 (299)
Q Consensus       178 ~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  255 (299)
                      ++++++++.|+.   +|++++++||+++|+.......  ............+.++..+|+|+|+++++|++.  .+++|+
T Consensus       145 ~~~~~~la~e~~---~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~  219 (230)
T PRK07041        145 EALARGLALELA---PVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGS  219 (230)
T ss_pred             HHHHHHHHHHhh---CceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCc
Confidence            999999999996   3999999999998764322111  122333444556777889999999999999974  579999


Q ss_pred             EEEeCCcccc
Q 022335          256 TLIVDGGLWL  265 (299)
Q Consensus       256 ~i~~dgg~~~  265 (299)
                      .+.+|||+.+
T Consensus       220 ~~~v~gg~~~  229 (230)
T PRK07041        220 TVLVDGGHAI  229 (230)
T ss_pred             EEEeCCCeec
Confidence            9999999765

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1.5e-33  Score=242.63  Aligned_cols=244  Identities=28%  Similarity=0.408  Sum_probs=209.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+++...+.++.++.+|+++.++++++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999999888888888776667899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|........+.+.+++++++++|+.+++.+++.+++.|++..       .++||++||..+..+.+....|+.+
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-------~~~~v~~ss~~~~~~~~~~~~y~~s  153 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-------WGRIINIASAHGLVASPFKSAYVAA  153 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CeEEEEEcchhhcCCCCCCchhHHH
Confidence            999999987666667778899999999999999999999999998765       5799999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchHH-hHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDEI-NSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      |++++.++++++.++. +.||++++++||++.++.....+         ..... ........+...+.+++|+|+++++
T Consensus       154 k~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  232 (255)
T TIGR01963       154 KHGLIGLTKVLALEVA-AHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALF  232 (255)
T ss_pred             HHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHH
Confidence            9999999999999986 78999999999999765321111         11111 1122234455678999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++++....++|+.+++|||+..
T Consensus       233 ~~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       233 LASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             HcCccccCccceEEEEcCcccc
Confidence            9987667789999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=4.4e-33  Score=238.77  Aligned_cols=242  Identities=31%  Similarity=0.402  Sum_probs=204.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++++|||||+++||++++++|+++|++|++++|+ .+..+.+.+.+... ...+.++.+|+++.+++.++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999986 44556665556544 3468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||+|.....++.+.+.+++++++++|+.+++.+.+++.+++.+.        .+.+++++|..+..+.++...
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  155 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--------RGAIVNITDIHAERPLKGYPV  155 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--------CeEEEEEeChhhcCCCCCchh
Confidence            999999999998777777778889999999999999999999999998764        378999998888888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||++++.++++++.++. + +|++++++||++.++.....+ ............+..+..+++|+++++.+++.+ .
T Consensus       156 Y~~sK~~~~~~~~~l~~~~~-~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~  231 (249)
T PRK09135        156 YCAAKAALEMLTRSLALELA-P-EVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-A  231 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHHC-C-CCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-c
Confidence            99999999999999999995 4 799999999999876543333 233333444555667778999999999888875 4


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      ...+|+.+++++|...
T Consensus       232 ~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        232 SFITGQILAVDGGRSL  247 (249)
T ss_pred             ccccCcEEEECCCeec
Confidence            5689999999999864

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-33  Score=247.41  Aligned_cols=235  Identities=19%  Similarity=0.178  Sum_probs=192.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999998888888888776666889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||.....++.+.+.++|+..+++|+.++++++++++|.|.+..... ....++||++||..+..+.++...|
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~~~~~~~Y  161 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKD-PAYEGHIVNTASMAGLLAPPAMGIY  161 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCC-CCCCeEEEEeCChhhccCCCCCcch
Confidence            999999999998777788889999999999999999999999999998865211 1112799999999999998899999


Q ss_pred             HHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCccCCCCCCCCCC-ch------------HHhHHHHhcCCCCCCCCHHH
Q 022335          171 AAAKAAVDAITRNLALEWGA-DYDIRVNGIAPGPIGDTPGMNKLA-PD------------EINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~-~~gi~v~~i~pG~v~t~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~~d  236 (299)
                      +++|++++.|+++++.+++. ..+|++++++||++.++....... +.            ................+++|
T Consensus       162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d  241 (287)
T PRK06194        162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEE  241 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHH
Confidence            99999999999999999852 347999999999997654322110 00            01111111111112369999


Q ss_pred             HHHHHHHHcC
Q 022335          237 IAMAALYLTS  246 (299)
Q Consensus       237 va~~~~~l~s  246 (299)
                      +|+.++.++.
T Consensus       242 va~~i~~~~~  251 (287)
T PRK06194        242 VAQLVFDAIR  251 (287)
T ss_pred             HHHHHHHHHH
Confidence            9999998774

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-34  Score=229.82  Aligned_cols=184  Identities=23%  Similarity=0.280  Sum_probs=168.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.|.++|||||++|||+++|++|.+.|.+|++++|+++.+++..++.    ..++...||+.|.++.+++++++.+.|+.
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCCc
Confidence            34999999999999999999999999999999999998888776655    45788899999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCC--CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           92 LDILVNAAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++||||||+...-++.  +...++.++.+++|+.++.+++++++|++.+++       .+.||+|||..+..|......
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-------~a~IInVSSGLafvPm~~~Pv  151 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-------EATIINVSSGLAFVPMASTPV  151 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-------CceEEEeccccccCccccccc
Confidence            99999999998776665  334566788999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                      ||++|||++.++.+|+.++. ..+|.|.-+.|-.|+|+
T Consensus       152 YcaTKAaiHsyt~aLR~Qlk-~t~veVIE~~PP~V~t~  188 (245)
T COG3967         152 YCATKAAIHSYTLALREQLK-DTSVEVIELAPPLVDTT  188 (245)
T ss_pred             chhhHHHHHHHHHHHHHHhh-hcceEEEEecCCceecC
Confidence            99999999999999999995 88999999999999875

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=246.46  Aligned_cols=255  Identities=21%  Similarity=0.248  Sum_probs=206.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++|++|||||+|+||+++++.|+++|++|++++|+.+..+...+++...+  .++.++.+|+++++++++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            57899999999999999999999999999999999988888777766543  478999999999999999 999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|......+.+.+.+++++.+++|+.+++.+++.++|.|++.+       .++||++||..+..+.++...|
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~vsS~~~~~~~~~~~~Y  153 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-------SGKIINISSISGRVGFPGLSPY  153 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CCEEEEECcccccCCCCCCchh
Confidence            999999999988777778889999999999999999999999999998765       5899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-----c------hHHhHHHHh--cCCCCCCCCHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-----P------DEINSKARD--YMPLYKLGEKWDI  237 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-----~------~~~~~~~~~--~~~~~~~~~~~dv  237 (299)
                      +++|+++++|+++++.++. ++||++++++||+++++.......     .      .........  ..+..++.+|+|+
T Consensus       154 ~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  232 (280)
T PRK06914        154 VSSKYALEGFSESLRLELK-PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDV  232 (280)
T ss_pred             HHhHHHHHHHHHHHHHHhh-hhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHH
Confidence            9999999999999999996 889999999999998764332111     0      011111111  1244567899999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCcccc--CCCCCCchhHHHHH
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWL--SRPRHLPKDAVKQL  279 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~--~~~~~~~~~~~~~~  279 (299)
                      |+++++++++...   +..+++.++..+  .....+|..+++.+
T Consensus       233 a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~  273 (280)
T PRK06914        233 ANLIVEIAESKRP---KLRYPIGKGVKLMILAKKILPWRLWEYL  273 (280)
T ss_pred             HHHHHHHHcCCCC---CcccccCCchHHHHHHHHhcCHHHHHHH
Confidence            9999999976542   245666544444  33444555555544

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-34  Score=248.20  Aligned_cols=221  Identities=23%  Similarity=0.239  Sum_probs=183.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g~i   92 (299)
                      +|+++||||++|||++++++|+++|++|++++|+.+.++.+.+    .  .+.++.+|+++.++++++++++.+.+ +++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            7899999999999999999999999999999999877655432    2  47789999999999999999998776 689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |++|||||+....++.+.+.++++..+++|+.|++.+++.++|.|.+.+       .++||++||..+..+.+....|++
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~a  150 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-------QGRIVQCSSILGLVPMKYRGAYNA  150 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-------CCEEEEECChhhcCCCCccchHHH
Confidence            9999999988778888899999999999999999999999999999876       689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-------c------hHHhHH---HHh-cCCCCCCCCHH
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-------P------DEINSK---ARD-YMPLYKLGEKW  235 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-------~------~~~~~~---~~~-~~~~~~~~~~~  235 (299)
                      ||+|+++|+++++.|+. ++||++++|+||+++|+.......       .      +.....   ... ..+.....+|+
T Consensus       151 sK~a~~~~~~~l~~el~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (277)
T PRK05993        151 SKFAIEGLSLTLRMELQ-GSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPE  229 (277)
T ss_pred             HHHHHHHHHHHHHHHhh-hhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHH
Confidence            99999999999999997 889999999999998764322110       0      000000   001 11222346899


Q ss_pred             HHHHHHHHHcCCC
Q 022335          236 DIAMAALYLTSDT  248 (299)
Q Consensus       236 dva~~~~~l~s~~  248 (299)
                      ++|+.++..+...
T Consensus       230 ~va~~i~~a~~~~  242 (277)
T PRK05993        230 AVYAVLLHALTAP  242 (277)
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999887543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=2.1e-33  Score=241.15  Aligned_cols=229  Identities=24%  Similarity=0.252  Sum_probs=189.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++++||||++|||.++++.|+++|++|++++|+++.++.+.+.+   +.++.++.+|+++.++++++++++.+.++++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36999999999999999999999999999999988776665544   346889999999999999999999999999999


Q ss_pred             EEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           95 LVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        95 lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +|||+|+.. ..++.+.+.++|++++++|+.+++.+++.+++.|.+.+       .++||++||..+..+.++...|+++
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~s  150 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-------HGHIINIGSTAGSWPYAGGNVYGAT  150 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEECCcccCCCCCCCchhHHH
Confidence            999999754 34667788999999999999999999999999998765       5899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-CC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-LA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      |++++++++.++.++. ++||++++|.||++.+++.... +. ......   .........+|+|+|++++++++....+
T Consensus       151 K~~~~~~~~~l~~~~~-~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dvA~~~~~l~~~~~~~  226 (248)
T PRK10538        151 KAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE---KTYQNTVALTPEDVSEAVWWVATLPAHV  226 (248)
T ss_pred             HHHHHHHHHHHHHHhc-CCCcEEEEEeCCeecccccchhhccCcHHHHH---hhccccCCCCHHHHHHHHHHHhcCCCcc
Confidence            9999999999999996 8899999999999975544321 11 111111   1111224579999999999999876655


Q ss_pred             ccCcEE
Q 022335          252 VNGTTL  257 (299)
Q Consensus       252 ~~G~~i  257 (299)
                      .+++..
T Consensus       227 ~~~~~~  232 (248)
T PRK10538        227 NINTLE  232 (248)
T ss_pred             cchhhc
Confidence            554443

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-34  Score=245.41  Aligned_cols=213  Identities=19%  Similarity=0.202  Sum_probs=179.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhH-HHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQV-LDAAVSALRSLGI-KAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~-~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++++|||||++|||+++|++|+++| ++|++++|+.+. ++++.+++...+. +++++.+|+++.++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            47899999999999999999999995 899999999886 8888888876553 799999999999999999999886 5


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|+.........+.++..+++++|+.+++.+++.++|.|.+++       .++||++||..+..+.++...
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-------~~~iv~isS~~g~~~~~~~~~  158 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-------FGQIIAMSSVAGERVRRSNFV  158 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-------CceEEEEechhhcCCCCCCcc
Confidence            8999999999976432111223455667899999999999999999999876       689999999998888888889


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |++||+|+.+|+++++.|+. ++||++++|+||+++|+.... ..            +.....+|+|+|+.++..+.+
T Consensus       159 Y~~sKaa~~~~~~~l~~el~-~~~i~v~~v~Pg~v~t~~~~~-~~------------~~~~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        159 YGSTKAGLDGFYLGLGEALR-EYGVRVLVVRPGQVRTRMSAH-AK------------EAPLTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHh-hcCCEEEEEeeCceecchhcc-CC------------CCCCCCCHHHHHHHHHHHHHc
Confidence            99999999999999999996 889999999999998753321 11            011246899999999998854

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-32  Score=240.29  Aligned_cols=250  Identities=22%  Similarity=0.293  Sum_probs=203.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.+|+++||||+++||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35688999999999999999999999999999999998877777777766667889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||||.....++.+.+.+++++.+++|+.+++++++.+++.|.++.       .++||++||..+..+.++...|
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  159 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-------RGDLIFVGSDVALRQRPHMGAY  159 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CceEEEECChHhcCCCCCcchH
Confidence            999999999987767777888999999999999999999999999998765       5899999999998888888899


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHH---hHHHH--hcCCCCCCCCHHHHHHHHHHHc
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI---NSKAR--DYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +++|++++.+++.++.++. .+||++++|+||+++++...... ....   .....  ......++..++|+|+++++++
T Consensus       160 ~~sK~a~~~l~~~~~~~~~-~~gi~v~~v~pG~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~  237 (274)
T PRK07775        160 GAAKAGLEAMVTNLQMELE-GTGVRASIVHPGPTLTGMGWSLP-AEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVA  237 (274)
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCCcccCcccccCC-hhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHh
Confidence            9999999999999999996 78999999999999766432211 1111   11111  1223456789999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccCCCCCCchh
Q 022335          246 SDTGKYVNGTTLIVDGGLWLSRPRHLPKD  274 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~~~~~~~~~  274 (299)
                      +...   .|..++++  .....+..+|++
T Consensus       238 ~~~~---~~~~~~~~--~~~~~~~~~~~~  261 (274)
T PRK07775        238 ETPR---GAHVVNME--VQPEAPLRAPAD  261 (274)
T ss_pred             cCCC---CCCeeEEe--eccCCCCCCcch
Confidence            7532   34555554  222334444433

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-35  Score=227.75  Aligned_cols=246  Identities=27%  Similarity=0.426  Sum_probs=212.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +.+|-+.||||+.+|+|++.++.|+++|++|++++..+++.++..+++   ++++.|.+.|++++++++..+..++.+||
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            456889999999999999999999999999999999998888877766   67899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCC------CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           91 KLDILVNAAAGNFLV------SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~~------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      ++|.+|||||+...-      .-...+.|+|++++++|+.|+|++++...-.|-++.++ ....+|.||+..|.+++.+.
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepd-q~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPD-QNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCC-CCCcceEEEeeceeeeecCc
Confidence            999999999986432      12345789999999999999999999999999877543 34447999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  243 (299)
                      -++.+|++||+++.+++--++++++ ..|||++.|.||.++|+ +...+ ++..........|. .|++.|.|-+..+-.
T Consensus       162 ~gqaaysaskgaivgmtlpiardla-~~gir~~tiapglf~tp-llssl-pekv~~fla~~ipfpsrlg~p~eyahlvqa  238 (260)
T KOG1199|consen  162 TGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPGLFDTP-LLSSL-PEKVKSFLAQLIPFPSRLGHPHEYAHLVQA  238 (260)
T ss_pred             cchhhhhcccCceEeeechhhhhcc-cCceEEEeecccccCCh-hhhhh-hHHHHHHHHHhCCCchhcCChHHHHHHHHH
Confidence            9999999999999999999999997 88999999999999755 33333 45555555566665 368999999999888


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.  +..+++|++|.+||-..+
T Consensus       239 ii--enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  239 II--ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             HH--hCcccCCeEEEecceecC
Confidence            88  668999999999998765

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=242.46  Aligned_cols=220  Identities=20%  Similarity=0.280  Sum_probs=189.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++++++|||||+++||++++++|+++|++|++++|+.+.++.+..++ ..+.++.++.+|+++.++++++++.+.+ +++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            56899999999999999999999999999999999998888887777 4456899999999999999999998876 899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|++|||||.....++.+.+.+++++++++|+.+++++++.++++|.+..       .++||++||..+..+.++...|+
T Consensus        81 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~  153 (263)
T PRK09072         81 INVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-------SAMVVNVGSTFGSIGYPGYASYC  153 (263)
T ss_pred             CCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-------CCEEEEecChhhCcCCCCccHHH
Confidence            99999999987767788889999999999999999999999999998765       58999999999998989999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      ++|+++.+++++++.++. ++||++++++||+++|+......      ..... ....+..+|+|+|+.+++++...
T Consensus       154 ~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~-~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        154 ASKFALRGFSEALRRELA-DTGVRVLYLAPRATRTAMNSEAV------QALNR-ALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccccchhhhc------ccccc-cccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999996 88999999999999765322110      00000 11125679999999999999643

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-33  Score=238.61  Aligned_cols=221  Identities=25%  Similarity=0.351  Sum_probs=193.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++++++|||++++||.+++++|+++|++|++++|+.+.++...+++...+.++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG   83 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999999888888788876667899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.+.|.++.       .++||++||..+..+.++...|
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y  156 (239)
T PRK07666         84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-------SGDIINISSTAGQKGAAVTSAY  156 (239)
T ss_pred             CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CcEEEEEcchhhccCCCCCcch
Confidence            999999999987767788889999999999999999999999999998865       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      +.+|+++..++++++.++. ++||++++|+||++.++........        ...+ ..+.+++|+|+.+..+++..
T Consensus       157 ~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~~-~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVR-KHNIRVTALTPSTVATDMAVDLGLT--------DGNP-DKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCcccCcchhhcccc--------ccCC-CCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999996 8899999999999976543211000        0111 34578999999999999653

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-34  Score=244.33  Aligned_cols=235  Identities=22%  Similarity=0.243  Sum_probs=189.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++||||++|||++++++|+++|++|++++|+. ...+.+.++++..+.++.++.+|++++++++++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            36689999999999999999999999999999999975 34566666676656678999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-----ccC
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-----TAS  164 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-----~~~  164 (299)
                      +++|++|||+|.....   .   .+++..+++|+.+++++++++.++|.+         .++||++||..+.     .+.
T Consensus        83 ~~~d~vi~~ag~~~~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~---------~~~iv~isS~~~~~~~~~~~~  147 (248)
T PRK07806         83 GGLDALVLNASGGMES---G---MDEDYAMRLNRDAQRNLARAALPLMPA---------GSRVVFVTSHQAHFIPTVKTM  147 (248)
T ss_pred             CCCcEEEECCCCCCCC---C---CCcceeeEeeeHHHHHHHHHHHhhccC---------CceEEEEeCchhhcCccccCC
Confidence            9999999999864321   1   124567899999999999999998853         4789999996543     233


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---CCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---KLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +.+..|++||++++.++++++.+++ .+||++++|.||++.++....   ...+... .  ....|.+++.+|+|+|+++
T Consensus       148 ~~~~~Y~~sK~a~e~~~~~l~~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~dva~~~  223 (248)
T PRK07806        148 PEYEPVARSKRAGEDALRALRPELA-EKGIGFVVVSGDMIEGTVTATLLNRLNPGAI-E--ARREAAGKLYTVSEFAAEV  223 (248)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhh-ccCeEEEEeCCccccCchhhhhhccCCHHHH-H--HHHhhhcccCCHHHHHHHH
Confidence            5567899999999999999999997 889999999999987543211   1111111 1  1234677899999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      .++++  ..+.+|+.++++|+....
T Consensus       224 ~~l~~--~~~~~g~~~~i~~~~~~~  246 (248)
T PRK07806        224 ARAVT--APVPSGHIEYVGGADYFL  246 (248)
T ss_pred             HHHhh--ccccCccEEEecCcccee
Confidence            99997  457899999999997653

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=242.17  Aligned_cols=237  Identities=16%  Similarity=0.176  Sum_probs=192.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC--
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK--   91 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~--   91 (299)
                      |+++||||++|||++++++|+++|++|++++|+. +.++..   ....+.++.++.+|++++++++++++++.+.++.  
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL---AEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH---HhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            5899999999999999999999999999999986 333322   2223557889999999999999999998877653  


Q ss_pred             cc--EEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           92 LD--ILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        92 id--~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++  ++|||+|...+ .++.+.+.++|++.+++|+.+++.+++.++++|++...      .++||++||..+..+.+...
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~  152 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV------DKRVINISSGAAKNPYFGWS  152 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC------CceEEEecchhhcCCCCCcH
Confidence            22  89999997644 67788899999999999999999999999999987431      47899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCC--CCch--HHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNK--LAPD--EINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .|+++|+|++++++.++.+++ .+.||++++|.||+++|+.....  ...+  ...+......+.+++.+|+|+|+.+++
T Consensus       153 ~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  232 (251)
T PRK06924        153 AYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRN  232 (251)
T ss_pred             HHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHH
Confidence            999999999999999999974 24689999999999986542210  0011  112233344567788999999999999


Q ss_pred             HcCCCCCCccCcEEEeCC
Q 022335          244 LTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dg  261 (299)
                      ++++. .+++|+.+.+|+
T Consensus       233 l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        233 LLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             HHhcc-cCCCCCEeehhh
Confidence            99874 789999998875

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=244.60  Aligned_cols=220  Identities=25%  Similarity=0.293  Sum_probs=186.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++++++||||+||||++++++|+++|++|++++|+.+..+.        ..+++++.+|++++++++++++.+.+.++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            47899999999999999999999999999999998754322        2357889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |+||||+|+....++.+.+.+++++.+++|+.+++.+++.++|.|++++       .++||++||..+..+.+....|++
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~  147 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-------SGRIINISSVLGFLPAPYMALYAA  147 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CceEEEECCccccCCCCCccHHHH
Confidence            9999999998778888889999999999999999999999999999876       689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch----HH---hHH--HHhcCCCCCCCCHHHHHHHHHH
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD----EI---NSK--ARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~----~~---~~~--~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      +|+++++++++++.|++ ++||++++|+||+++|+.........    ..   ...  .....+..+..+|+++|+.++.
T Consensus       148 sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  226 (270)
T PRK06179        148 SKHAVEGYSESLDHEVR-QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVK  226 (270)
T ss_pred             HHHHHHHHHHHHHHHHh-hhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHH
Confidence            99999999999999997 88999999999999876433221110    00   000  0111234556899999999999


Q ss_pred             HcCCC
Q 022335          244 LTSDT  248 (299)
Q Consensus       244 l~s~~  248 (299)
                      +++..
T Consensus       227 ~~~~~  231 (270)
T PRK06179        227 AALGP  231 (270)
T ss_pred             HHcCC
Confidence            98654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.1e-33  Score=240.72  Aligned_cols=220  Identities=21%  Similarity=0.208  Sum_probs=180.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++++||||++|||++++++|+++|  +.|++..|+...  .      ....++.++++|+++.++++++    .++++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~------~~~~~~~~~~~Dls~~~~~~~~----~~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D------FQHDNVQWHALDVTDEAEIKQL----SEQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c------cccCceEEEEecCCCHHHHHHH----HHhcCCC
Confidence            479999999999999999999985  556666665432  1      1234688999999999998875    3456899


Q ss_pred             cEEEEcCCCCCC------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---c
Q 022335           93 DILVNAAAGNFL------VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---A  163 (299)
Q Consensus        93 d~lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---~  163 (299)
                      |+||||+|....      .++.+.+.+.|++.+++|+.+++.+++.++|.|++..       .++|+++||..+..   +
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-------~~~i~~iss~~~~~~~~~  141 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-------SAKFAVISAKVGSISDNR  141 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-------CceEEEEeecccccccCC
Confidence            999999998642      3566788899999999999999999999999998765       57899998865532   3


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGAD--YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+++..|+++|+++++|+++|+.|+. .  +||+|++|+||+++|++... +         ....+.++..+|+|+|+.+
T Consensus       142 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~~~~i~v~~v~PG~v~t~~~~~-~---------~~~~~~~~~~~~~~~a~~~  210 (235)
T PRK09009        142 LGGWYSYRASKAALNMFLKTLSIEWQ-RSLKHGVVLALHPGTTDTALSKP-F---------QQNVPKGKLFTPEYVAQCL  210 (235)
T ss_pred             CCCcchhhhhHHHHHHHHHHHHHHhh-cccCCeEEEEEcccceecCCCcc-h---------hhccccCCCCCHHHHHHHH
Confidence            45678999999999999999999996 4  59999999999998765321 1         1233556678999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      ++++++...+.+|+.+.+||++.
T Consensus       211 ~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        211 LGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHHcCChhhCCcEEeeCCcCC
Confidence            99999988899999999999986

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=9e-33  Score=235.40  Aligned_cols=237  Identities=34%  Similarity=0.495  Sum_probs=205.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +||||++++||.+++++|+++|++|++++|+. +.++...+.+...+.++.++.+|++++++++++++++.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 55666667776667789999999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA  175 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKa  175 (299)
                      ||++|......+.+.+.+++++.+++|+.+++.+.+.+.+.+.+..       .+++|++||..+..+.+....|+++|+
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~~v~~sS~~~~~g~~~~~~y~~~k~  153 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-------SGRIINISSVVGLMGNAGQANYAASKA  153 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CeEEEEECCccccCCCCCCchhHHHHH
Confidence            9999987666667778899999999999999999999999997654       579999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCc
Q 022335          176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGT  255 (299)
Q Consensus       176 al~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  255 (299)
                      +++.++++++.++. ..|+++++++||+++++.. ... ............+..++.+++|+++.+++++++...+.+|+
T Consensus       154 a~~~~~~~l~~~~~-~~g~~~~~i~pg~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~  230 (239)
T TIGR01830       154 GVIGFTKSLAKELA-SRNITVNAVAPGFIDTDMT-DKL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQ  230 (239)
T ss_pred             HHHHHHHHHHHHHh-hcCeEEEEEEECCCCChhh-hhc-ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCC
Confidence            99999999999996 7899999999999965432 222 23333444556677788999999999999998877789999


Q ss_pred             EEEeCCcc
Q 022335          256 TLIVDGGL  263 (299)
Q Consensus       256 ~i~~dgg~  263 (299)
                      .+++++|+
T Consensus       231 ~~~~~~g~  238 (239)
T TIGR01830       231 VIHVDGGM  238 (239)
T ss_pred             EEEeCCCc
Confidence            99999986

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.8e-32  Score=235.60  Aligned_cols=241  Identities=36%  Similarity=0.509  Sum_probs=197.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHHHhcC-CcEEEEEcCCCC-HHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV--LDAAVSALRSLG-IKAVGFEGDVRR-QEHAKKVVESTF   86 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~Dl~~-~~~v~~~~~~~~   86 (299)
                      .+++|+++||||++|||+++|+.|+++|++|+++.++.+.  .+...+.....+ ..+.++.+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4679999999999999999999999999999988887654  344444443122 368888999998 999999999999


Q ss_pred             HHcCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           87 EHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      +.+|++|++|||||+... .++.+.+.++|++.+++|+.+++.+++.+.|+|++         . +||++||..+. +.+
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---------~-~Iv~isS~~~~-~~~  150 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---------Q-RIVNISSVAGL-GGP  150 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---------C-eEEEECCchhc-CCC
Confidence            999999999999999877 48889999999999999999999999988888872         3 89999999999 877


Q ss_pred             C-chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH-HhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          166 Y-QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       166 ~-~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      . +.+|++||+|+++|++.++.|+. ++||++++|+||+++|+.......... .........+..+...|++++..+.+
T Consensus       151 ~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (251)
T COG1028         151 PGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAF  229 (251)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            7 49999999999999999999996 889999999999997654332221110 01111111255578889999999999


Q ss_pred             HcCCC-CCCccCcEEEeCCcc
Q 022335          244 LTSDT-GKYVNGTTLIVDGGL  263 (299)
Q Consensus       244 l~s~~-~~~~~G~~i~~dgg~  263 (299)
                      +.+.. ..+++|+.+.+|||.
T Consensus       230 ~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         230 LASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HcCcchhccccCCEEEeCCCC
Confidence            88764 678999999988886

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-33  Score=238.97  Aligned_cols=218  Identities=25%  Similarity=0.207  Sum_probs=187.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH-FGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~-~g~id   93 (299)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.  +.++.++++|+++.++++++++.+.+. ++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            689999999999999999999999999999999988777766554  457899999999999999999998877 78999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||||......+.+.+.++++.++++|+.+++.+++++.++|++.+       .++||++||..+..+.++...|+.|
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~s  152 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-------GARVINTSSASAIYGQPGLAVYSAT  152 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CCEEEEeCchhhCcCCCCchhhHHH
Confidence            999999988777888889999999999999999999999999998875       6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      |+++++++++++.++. ++||++++|.||++++++... ...+.... ...  ......+|+++|++++.++.
T Consensus       153 Kaa~~~~~~~l~~~~~-~~~i~v~~i~pg~~~t~~~~~-~~~~~~~~-~~~--~~~~~~~~~~va~~~~~~~~  220 (260)
T PRK08267        153 KFAVRGLTEALDLEWR-RHGIRVADVMPLFVDTAMLDG-TSNEVDAG-STK--RLGVRLTPEDVAEAVWAAVQ  220 (260)
T ss_pred             HHHHHHHHHHHHHHhc-ccCcEEEEEecCCcCCccccc-ccchhhhh-hHh--hccCCCCHHHHHHHHHHHHh
Confidence            9999999999999996 889999999999998664332 11111111 111  12234688999999999984

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-32  Score=232.05  Aligned_cols=213  Identities=21%  Similarity=0.235  Sum_probs=186.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999998888887777654  457899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-chHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHV  170 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~Y  170 (299)
                      +|++|||+|+....++.+.+.+.+++++++|+.+++.+++.++++|++.+       .++||++||..+..+.+. ...|
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~~Y  154 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-------SGHLVLISSVSAVRGLPGVKAAY  154 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCeEEEEeccccccCCCCCcccH
Confidence            99999999998777777888899999999999999999999999998865       689999999998888775 6889


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      +.||++++.+++.++.++. ..||++++|+||+++|+.... ...            .....+++++|+.++..+..
T Consensus       155 ~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~-~~~------------~~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        155 AASKAGVASLGEGLRAELA-KTPIKVSTIEPGYIRSEMNAK-AKS------------TPFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcCcchhhhc-ccc------------CCccCCHHHHHHHHHHHHhc
Confidence            9999999999999999996 789999999999997653221 110            12347899999999887754

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=235.53  Aligned_cols=224  Identities=26%  Similarity=0.345  Sum_probs=190.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++++|||||+++||+++++.|+++|++|++++|+....+...+++...+.++.++.+|+++.++++++++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999999888888888877677899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           94 ILVNAAAGNFLVSAEDL-SPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      ++|||+|......+.+. +.+++++.+++|+.+++.+++.+++.|.+.        .++||++||..+..+.++...|++
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~  152 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--------RGQIVVVSSLAGLTGVPTRSGYAA  152 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--------CCEEEEEecccccCCCCCccHHHH
Confidence            99999998777777777 889999999999999999999999998764        478999999999989989999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      +|++++.++++++.++. ++||++++|.||++.++........... ..........++.+|+|+|+.+++++..
T Consensus       153 sK~~~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        153 SKHALHGFFDSLRIELA-DDGVAVTVVCPGFVATDIRKRALDGDGK-PLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHHHHHHHhh-hcCceEEEEecCccccCcchhhcccccc-ccccccccccCCCCHHHHHHHHHHHhhC
Confidence            99999999999999996 8899999999999976543322211110 0000111123678999999999999964

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=3.2e-32  Score=219.49  Aligned_cols=232  Identities=21%  Similarity=0.196  Sum_probs=185.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc-CCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH--c
Q 022335           14 GKVALITGGGSGIGFEISTQFGKH-GASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH--F   89 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~-G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~--~   89 (299)
                      -+.++||||.+|||..++++|.+. |-.+++. .|+++......+.......+++++++|+++.+++.++++++.+-  .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            345999999999999999999976 5566554 45566653333333334679999999999999999999999987  4


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC----CCCCCCceEEEeccccccccC
Q 022335           90 GKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPG----RSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        90 g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~----~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      .++|+||||||+... ....+.+.+.|.+.+++|..+++.++|+|+|++++....    .....++.|||+||..+..+.
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            689999999998765 455667788899999999999999999999999987532    233446789999987765432


Q ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          165 ---WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       165 ---~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                         ..+.+|..||+|+++++|+++.|+. +.+|-|..+|||||+|++....                 ...++|+-+..+
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~-~~~ilv~sihPGwV~TDMgg~~-----------------a~ltveeSts~l  224 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLK-DDHILVVSIHPGWVQTDMGGKK-----------------AALTVEESTSKL  224 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhc-CCcEEEEEecCCeEEcCCCCCC-----------------cccchhhhHHHH
Confidence               3578999999999999999999996 8899999999999998765411                 235777777777


Q ss_pred             HHHcCCCCCCccCcEEEeCCcc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +.-...-...-+|..++.|+-.
T Consensus       225 ~~~i~kL~~~hnG~ffn~dlt~  246 (249)
T KOG1611|consen  225 LASINKLKNEHNGGFFNRDGTP  246 (249)
T ss_pred             HHHHHhcCcccCcceEccCCCc
Confidence            7666655566789999888753

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-31  Score=228.18  Aligned_cols=233  Identities=30%  Similarity=0.363  Sum_probs=194.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++++++||||+++||.++++.|+++|++|++++|+++.++.+.+++... .++.++.+|++++++++++++++...+++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            56899999999999999999999999999999999998877766666543 36888999999999999999999888999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCCchHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQIHV  170 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~~Y  170 (299)
                      +|.+|+++|.....++.+  .++++..+++|+.+++.+.+.++|.|.+         .++||++||..+. .+.+....|
T Consensus        82 id~ii~~ag~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~~~Y  150 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIKIPLYAVNASLRFLKE---------GSSIVLVSSMSGIYKASPDQLSY  150 (238)
T ss_pred             CCEEEEcCCCcCCCchHH--HHHHHHHHHHhchHHHHHHHHHHHHHhc---------CCEEEEEecchhcccCCCCchHH
Confidence            999999998654433333  3889999999999999999999999864         4789999998774 356778899


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~  249 (299)
                      +++|++++.++++++.++. .+||++++|+||++.++..     .......   ..+. ....+++|+++.+.+++++..
T Consensus       151 ~~sK~~~~~~~~~~~~~~~-~~gi~v~~i~pg~v~~~~~-----~~~~~~~---~~~~~~~~~~~~~va~~~~~~~~~~~  221 (238)
T PRK05786        151 AVAKAGLAKAVEILASELL-GRGIRVNGIAPTTISGDFE-----PERNWKK---LRKLGDDMAPPEDFAKVIIWLLTDEA  221 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCCCC-----chhhhhh---hccccCCCCCHHHHHHHHHHHhcccc
Confidence            9999999999999999996 7899999999999976532     1111111   1111 236799999999999999888


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+.+|||..+
T Consensus       222 ~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        222 DWVDGVVIPVDGGARL  237 (238)
T ss_pred             cCccCCEEEECCcccc
Confidence            8899999999998764

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=226.41  Aligned_cols=197  Identities=20%  Similarity=0.285  Sum_probs=170.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +++||||++|||++++++|+++ ++|++++|+..                 .++||+++.+++++++++    ++++|++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~l   59 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDAV   59 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999 99999999753                 368999999999988765    4799999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA  175 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKa  175 (299)
                      |||+|.....++.+.+.++|++.+++|+.+++++++++.|+|.+         .++|+++||..+..+.++...|+++|+
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~g~iv~iss~~~~~~~~~~~~Y~~sK~  130 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---------GGSFTLTSGILSDEPIPGGASAATVNG  130 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCeEEEEcccccCCCCCCchHHHHHHH
Confidence            99999876677888899999999999999999999999999964         478999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCc
Q 022335          176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGT  255 (299)
Q Consensus       176 al~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  255 (299)
                      |+++|+++++.|+  ++||++|+|+||++++++..           .....+.....+|+|+|+.+..+++.   ..+|+
T Consensus       131 a~~~~~~~la~e~--~~gi~v~~i~Pg~v~t~~~~-----------~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~g~  194 (199)
T PRK07578        131 ALEGFVKAAALEL--PRGIRINVVSPTVLTESLEK-----------YGPFFPGFEPVPAARVALAYVRSVEG---AQTGE  194 (199)
T ss_pred             HHHHHHHHHHHHc--cCCeEEEEEcCCcccCchhh-----------hhhcCCCCCCCCHHHHHHHHHHHhcc---ceeeE
Confidence            9999999999998  56999999999999764210           01112344568999999999999863   58898


Q ss_pred             EEEe
Q 022335          256 TLIV  259 (299)
Q Consensus       256 ~i~~  259 (299)
                      .|.+
T Consensus       195 ~~~~  198 (199)
T PRK07578        195 VYKV  198 (199)
T ss_pred             Eecc
Confidence            8875

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=262.64  Aligned_cols=222  Identities=23%  Similarity=0.213  Sum_probs=192.3

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .....++||+++||||++|||++++++|+++|++|++++|+++.++++.+++...+.++.++.+|+++.++++++++++.
T Consensus       364 ~~~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        364 DLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             CcccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34456889999999999999999999999999999999999999888888887777789999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCC--CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDL--SPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+|++|++|||||+.....+.+.  +.+++++++++|+.+++.++++++|.|+++.       .++||++||..+..+.
T Consensus       444 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~  516 (657)
T PRK07201        444 AEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-------FGHVVNVSSIGVQTNA  516 (657)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-------CCEEEEECChhhcCCC
Confidence            999999999999997654444332  3578999999999999999999999998876       6899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++++.|+. ++||++++|+||+++|++.....   .        .......+|+++|+.++..
T Consensus       517 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~T~~~~~~~---~--------~~~~~~~~~~~~a~~i~~~  584 (657)
T PRK07201        517 PRFSAYVASKAALDAFSDVAASETL-SDGITFTTIHMPLVRTPMIAPTK---R--------YNNVPTISPEEAADMVVRA  584 (657)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEECCcCcccccCccc---c--------ccCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999997 88999999999999876532210   0        0112357999999999987


Q ss_pred             cCC
Q 022335          245 TSD  247 (299)
Q Consensus       245 ~s~  247 (299)
                      +..
T Consensus       585 ~~~  587 (657)
T PRK07201        585 IVE  587 (657)
T ss_pred             HHh
Confidence            743

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=232.89  Aligned_cols=218  Identities=21%  Similarity=0.245  Sum_probs=180.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.    ..  .+.++.+|+++.++++++++++.+.++++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999999987655432    22  3678899999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      +|||+|.....++.+.+.++++..+++|+.+++.++++++|.|++.        .++||++||..+..+.+....|+++|
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK  147 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--------RGLVVNIGSVSGVLVTPFAGAYCASK  147 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--------CCEEEEECCccccCCCCCccHHHHHH
Confidence            9999998777788888999999999999999999999999999764        47899999999999988999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-----------hHHhHHHH--hcCCCCCCCCHHHHHHHH
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-----------DEINSKAR--DYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~~~~dva~~~  241 (299)
                      ++++.++++++.|++ ++||++++|+||+++|+........           ....+...  .........+|+++|+.+
T Consensus       148 ~al~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  226 (274)
T PRK05693        148 AAVHALSDALRLELA-PFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQL  226 (274)
T ss_pred             HHHHHHHHHHHHHhh-hhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence            999999999999997 8899999999999987643321100           00000000  001112346899999999


Q ss_pred             HHHcCC
Q 022335          242 LYLTSD  247 (299)
Q Consensus       242 ~~l~s~  247 (299)
                      +..+..
T Consensus       227 ~~~~~~  232 (274)
T PRK05693        227 LAAVQQ  232 (274)
T ss_pred             HHHHhC
Confidence            887754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=2.3e-32  Score=231.28  Aligned_cols=189  Identities=25%  Similarity=0.284  Sum_probs=173.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+.+|.|+|||+.+|+|+.+|++|.++|++|++...+++..+.+..+.+  ..+...++.|++++++++++.+.+.+..
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            45679999999999999999999999999999999988888788777765  5678889999999999999999999976


Q ss_pred             --CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           90 --GKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        90 --g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                        .++-.||||||+.. .++.+-.+.+++++.+++|+.|++.++++++|++++.+        ||||+|||+.|..+.|.
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--------GRvVnvsS~~GR~~~p~  174 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--------GRVVNVSSVLGRVALPA  174 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--------CeEEEecccccCccCcc
Confidence              46999999999764 47778889999999999999999999999999999884        99999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG  209 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~  209 (299)
                      .+.|++||+|++.++.++++|+. +.||+|.+|.||+++|+..
T Consensus       175 ~g~Y~~SK~aVeaf~D~lR~EL~-~fGV~VsiiePG~f~T~l~  216 (322)
T KOG1610|consen  175 LGPYCVSKFAVEAFSDSLRRELR-PFGVKVSIIEPGFFKTNLA  216 (322)
T ss_pred             cccchhhHHHHHHHHHHHHHHHH-hcCcEEEEeccCccccccC
Confidence            99999999999999999999996 9999999999998876644

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-31  Score=229.48  Aligned_cols=238  Identities=23%  Similarity=0.294  Sum_probs=192.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .|++|||||+|+||++++++|+++|++|++++|+.+.++.+.++.   +.++.++.+|+++.++++++++++.+.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999987666554432   34688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||+|.....+..+.+.+++++.+++|+.++++++++++|+|++..       .++||++||..+..+.++...|++|
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~s  151 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-------GGRIVQVSSEGGQIAYPGFSLYHAT  151 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEEcCcccccCCCCCchhHHH
Confidence            999999988777778888999999999999999999999999998765       5899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-------chHH---hHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-------PDEI---NSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      |++++.++++++.++. ++||++++++||.+.|+.......       ....   .......-+..-..+++|++++++.
T Consensus       152 K~a~~~~~~~l~~~~~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~  230 (276)
T PRK06482        152 KWGIEGFVEAVAQEVA-PFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIA  230 (276)
T ss_pred             HHHHHHHHHHHHHHhh-ccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHH
Confidence            9999999999999996 889999999999986654221110       1111   1111111122224789999999988


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+...   ..+..+++.++...
T Consensus       231 ~~~~~---~~~~~~~~g~~~~~  249 (276)
T PRK06482        231 SADQT---PAPRRLTLGSDAYA  249 (276)
T ss_pred             HHcCC---CCCeEEecChHHHH
Confidence            87533   23455666666554

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-31  Score=224.45  Aligned_cols=224  Identities=30%  Similarity=0.422  Sum_probs=191.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.+++++||||+|+||.+++++|+++|++|++++|+++.++...+++... .++.++.+|+++.++++++++++.+.+++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999999999999999998888887777654 57889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|++||++|.....++.+.+.+++++++++|+.+++.+++++++.|.+ .       .++||++||..+..+......|+
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-------~~~iv~~ss~~~~~~~~~~~~y~  154 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-G-------GGYIINISSLAGTNFFAGGAAYN  154 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-C-------CeEEEEECChhhccCCCCCchHH
Confidence            999999999877677788899999999999999999999999999943 2       58999999999888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      ++|+++.++++.++.++. ..|+++++|+||++.++... ....+.          .....+++|+++.+.+++......
T Consensus       155 ~sk~a~~~~~~~~~~~~~-~~gi~v~~v~pg~~~t~~~~-~~~~~~----------~~~~~~~~d~a~~~~~~l~~~~~~  222 (237)
T PRK07326        155 ASKFGLVGFSEAAMLDLR-QYGIKVSTIMPGSVATHFNG-HTPSEK----------DAWKIQPEDIAQLVLDLLKMPPRT  222 (237)
T ss_pred             HHHHHHHHHHHHHHHHhc-ccCcEEEEEeeccccCcccc-cccchh----------hhccCCHHHHHHHHHHHHhCCccc
Confidence            999999999999999996 78999999999999765322 211111          011368999999999999876544


Q ss_pred             ccCcE
Q 022335          252 VNGTT  256 (299)
Q Consensus       252 ~~G~~  256 (299)
                      +.++.
T Consensus       223 ~~~~~  227 (237)
T PRK07326        223 LPSKI  227 (237)
T ss_pred             cccce
Confidence            44433

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-31  Score=227.59  Aligned_cols=210  Identities=18%  Similarity=0.147  Sum_probs=183.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |+++||||++|||++++++|+++|++|++++|+++..+...+++... +.++.++++|++++++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999998887777776544 45799999999999999999998755   479


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|.....++.+.+.+++.+.+++|+.+++++++++.|.|.+.+       .++||++||..+..+.++...|+++
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~s  151 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-------SGTIVGISSVAGDRGRASNYVYGSA  151 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-------CCEEEEEecccccCCCCCCcccHHH
Confidence            999999987777778888999999999999999999999999998866       6899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |+++++++++++.++. ++||++++|+||+++|+... ..           ..+.....+|+++++.++.+++.
T Consensus       152 K~a~~~~~~~l~~el~-~~gi~v~~v~pg~v~t~~~~-~~-----------~~~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        152 KAALTAFLSGLRNRLF-KSGVHVLTVKPGFVRTPMTA-GL-----------KLPGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             HHHHHHHHHHHHHHhh-ccCcEEEEEecCcccChhhh-cc-----------CCCccccCCHHHHHHHHHHHHhC
Confidence            9999999999999997 88999999999999865321 11           11233467899999999998864

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-32  Score=219.20  Aligned_cols=185  Identities=25%  Similarity=0.357  Sum_probs=166.6

Q ss_pred             CCEEEEecCC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Q 022335           14 GKVALITGGG-SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE-HFGK   91 (299)
Q Consensus        14 ~k~vlItGas-~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~-~~g~   91 (299)
                      .|.+||||++ ||||.+++++|++.|+.|+.++|+.+....+..+.     .+..+.+|+++++++..+..++++ .+|+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            5689999885 89999999999999999999999987655554322     388899999999999999999999 7899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|.|+||||..-..+..+.+.+..+++|++|+.|.+++++++...+.+.        +|.|||++|..+..|++..+.|+
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--------KGtIVnvgSl~~~vpfpf~~iYs  153 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--------KGTIVNVGSLAGVVPFPFGSIYS  153 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--------cceEEEecceeEEeccchhhhhh
Confidence            9999999998877888999999999999999999999999999766665        59999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK  212 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~  212 (299)
                      +||||++++++.|+.|+. +.||+|..+.||-|.|.-....
T Consensus       154 AsKAAihay~~tLrlEl~-PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  154 ASKAAIHAYARTLRLELK-PFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             HHHHHHHHhhhhcEEeee-ccccEEEEecccceecccccCC
Confidence            999999999999999996 9999999999999987654443

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-31  Score=226.08  Aligned_cols=220  Identities=20%  Similarity=0.194  Sum_probs=179.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH-HHHHc---CC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES-TFEHF---GK   91 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~-~~~~~---g~   91 (299)
                      ++|||||++|||++++++|+++|++|++++|+.+..  .   ....+.++.++.+|+++.+++++++++ +.+.+   ++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            699999999999999999999999999999986531  1   222345788999999999999998877 55555   47


Q ss_pred             ccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           92 LDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        92 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      +|++|||+|+... .++.+.+.++|++.+++|+.+++.+++.+.+.|.++.       .++||++||..+..+.+++..|
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y  150 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-------ERRILHISSGAARNAYAGWSVY  150 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-------CCEEEEEeChhhcCCCCCchHH
Confidence            9999999997654 5677788999999999999999999999999998765       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--CCc--hHHhHHHHhcCCCCCCCCHHHHHH-HHHHHc
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--LAP--DEINSKARDYMPLYKLGEKWDIAM-AALYLT  245 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~dva~-~~~~l~  245 (299)
                      +++|++++++++.++.+ . ..||++++|+||+++|+.....  ...  ......+....+.++..+|+|+|. .+.+|+
T Consensus       151 ~~sK~a~~~~~~~~~~~-~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~  228 (243)
T PRK07023        151 CATKAALDHHARAVALD-A-NRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLL  228 (243)
T ss_pred             HHHHHHHHHHHHHHHhc-C-CCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHh
Confidence            99999999999999999 5 7799999999999986532110  000  011223444566778899999999 567777


Q ss_pred             CCCC
Q 022335          246 SDTG  249 (299)
Q Consensus       246 s~~~  249 (299)
                      ++.-
T Consensus       229 ~~~~  232 (243)
T PRK07023        229 SDDF  232 (243)
T ss_pred             cccc
Confidence            6643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=4e-32  Score=229.80  Aligned_cols=208  Identities=20%  Similarity=0.241  Sum_probs=177.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      |+|++||||+.|||++.|++||++|.+|++++|++++++++++|+.+. +.+++++.+|+++.+++-   +.+.+.+  .
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~y---e~i~~~l~~~  125 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVY---EKLLEKLAGL  125 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhH---HHHHHHhcCC
Confidence            699999999999999999999999999999999999999999999765 568999999999988733   3333333  3


Q ss_pred             CccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           91 KLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        91 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      .+.+||||+|...  +..+.+.+...+++.+.+|+.+...+++.++|.|.+++       +|.||++||..+..|.|.+.
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-------~G~IvnigS~ag~~p~p~~s  198 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-------KGIIVNIGSFAGLIPTPLLS  198 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-------CceEEEeccccccccChhHH
Confidence            6778999999876  67788888889999999999999999999999999977       79999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      .|+++|++++.|+++|..||. .+||.|-++.|++|.|.+.....             +.....+|+.-|...+.-.
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~-~~gI~Vq~v~p~~VaTkm~~~~~-------------~sl~~ps~~tfaksal~ti  261 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYE-SKGIFVQSVIPYLVATKMAKYRK-------------PSLFVPSPETFAKSALNTI  261 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcCeEEEEeehhheeccccccCC-------------CCCcCcCHHHHHHHHHhhc
Confidence            999999999999999999997 89999999999999765432211             1122356666666665555

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=4.2e-31  Score=213.13  Aligned_cols=163  Identities=32%  Similarity=0.437  Sum_probs=153.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCC--hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR--KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |++|||||++|||++++++|+++|+ +|++++|+  .+..+++.++++..+.++.++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999966 57889998  77788888889888889999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|++|||+|+....++.+.+.++|++.+++|+.+++.+.++++|    ++       .++||++||..+..+.+++..|+
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-------~g~iv~~sS~~~~~~~~~~~~Y~  149 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QG-------GGKIVNISSIAGVRGSPGMSAYS  149 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT-------TEEEEEEEEGGGTSSSTTBHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee----cc-------ccceEEecchhhccCCCCChhHH
Confidence            99999999998888999999999999999999999999999999    22       69999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 022335          172 AAKAAVDAITRNLALEW  188 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~  188 (299)
                      ++|+|+++|+++++.|+
T Consensus       150 askaal~~~~~~la~e~  166 (167)
T PF00106_consen  150 ASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-30  Score=222.46  Aligned_cols=204  Identities=18%  Similarity=0.169  Sum_probs=170.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++++||||++|||++++++|+++|++|++++|+++.++++.+    ...++.++.+|+++.++++++++++..   .+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence            689999999999999999999999999999999876655433    234688999999999999999887642   5799


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      +|||+|.....+..+.+.++|++++++|+.+++++++++.|.|.+         +++||++||..+..+.++...|+++|
T Consensus        75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~~iv~isS~~~~~~~~~~~~Y~asK  145 (240)
T PRK06101         75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---------GHRVVIVGSIASELALPRAEAYGASK  145 (240)
T ss_pred             EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---------CCeEEEEechhhccCCCCCchhhHHH
Confidence            999998654444456788999999999999999999999999853         46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      +++++++++++.|+. ++||++++++||+++|+......            .......+|+++++.++..+..
T Consensus       146 ~a~~~~~~~l~~e~~-~~gi~v~~v~pg~i~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        146 AAVAYFARTLQLDLR-PKGIEVVTVFPGFVATPLTDKNT------------FAMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHHHHHHHH-hcCceEEEEeCCcCCCCCcCCCC------------CCCCcccCHHHHHHHHHHHHhc
Confidence            999999999999996 88999999999999865432110            0112246899999999887754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.98  E-value=4.4e-31  Score=225.80  Aligned_cols=204  Identities=22%  Similarity=0.210  Sum_probs=165.6

Q ss_pred             HHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCC
Q 022335           30 ISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAED  109 (299)
Q Consensus        30 ia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~  109 (299)
                      +|++|+++|++|++++|+.+..+.           ..++++|+++.++++++++++.   +++|+||||||+...     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~-----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT-----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-----
Confidence            478999999999999998765321           2457999999999999988763   689999999997521     


Q ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---------------------------
Q 022335          110 LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---------------------------  162 (299)
Q Consensus       110 ~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---------------------------  162 (299)
                         ++++.++++|+.+++.+++.++|+|.+         .|+||++||..+..                           
T Consensus        62 ---~~~~~~~~vN~~~~~~l~~~~~~~~~~---------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (241)
T PRK12428         62 ---APVELVARVNFLGLRHLTEALLPRMAP---------GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAH  129 (241)
T ss_pred             ---CCHHHhhhhchHHHHHHHHHHHHhccC---------CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhcc
Confidence               347899999999999999999999853         47999999998762                           


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHH-HHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLA-LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la-~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +.++...|++||+|+.+++++++ .+++ ++||+||+|+||+++|++..................|.+++.+|+|+|+++
T Consensus       130 ~~~~~~~Y~~sK~a~~~~~~~la~~e~~-~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~  208 (241)
T PRK12428        130 PVALATGYQLSKEALILWTMRQAQPWFG-ARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVL  208 (241)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHhhh-ccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHH
Confidence            56678899999999999999999 9996 889999999999998765432111100001111245778889999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|+.+.+|||+..
T Consensus       209 ~~l~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        209 VFLCSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             HHHcChhhcCccCcEEEecCchHH
Confidence            999998889999999999999764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=216.57  Aligned_cols=208  Identities=14%  Similarity=0.142  Sum_probs=159.4

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      |+-.+||+.+.|++|+++||||++|||++++++|+++|++|++++|+......   +. ... ...++.+|+++.+++++
T Consensus         1 ~~~~~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~~-~~~~~~~D~~~~~~~~~   75 (245)
T PRK12367          1 MPQADPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DES-PNEWIKWECGKEESLDK   75 (245)
T ss_pred             CCCcchhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-ccC-CCeEEEeeCCCHHHHHH
Confidence            88899999999999999999999999999999999999999999998632111   11 111 23578999999988764


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc
Q 022335           81 VVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH  160 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~  160 (299)
                             .++++|++|||||+...   .+.+.++|++.+++|+.++++++++++|.|.++....    ++.+++.+|..+
T Consensus        76 -------~~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~----g~~iiv~ss~a~  141 (245)
T PRK12367         76 -------QLASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQI----PKEIWVNTSEAE  141 (245)
T ss_pred             -------hcCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCC----CeEEEEEecccc
Confidence                   35789999999997532   3467899999999999999999999999997642100    233444456555


Q ss_pred             cccCCCchHHHHHHHHHHHHH---HHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHH
Q 022335          161 YTASWYQIHVAAAKAAVDAIT---RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       161 ~~~~~~~~~Y~~sKaal~~l~---~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      ..+ +....|++||+|+..+.   +.++.|+. ..||+++.++||+++|+..                 + ....+|+++
T Consensus       142 ~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~-~~~i~v~~~~pg~~~t~~~-----------------~-~~~~~~~~v  201 (245)
T PRK12367        142 IQP-ALSPSYEISKRLIGQLVSLKKNLLDKNE-RKKLIIRKLILGPFRSELN-----------------P-IGIMSADFV  201 (245)
T ss_pred             cCC-CCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccEEEEecCCCcccccC-----------------c-cCCCCHHHH
Confidence            544 35678999999986544   44444554 7799999999999976521                 1 124789999


Q ss_pred             HHHHHHHcCC
Q 022335          238 AMAALYLTSD  247 (299)
Q Consensus       238 a~~~~~l~s~  247 (299)
                      |+.+++.+..
T Consensus       202 A~~i~~~~~~  211 (245)
T PRK12367        202 AKQILDQANL  211 (245)
T ss_pred             HHHHHHHHhc
Confidence            9999999854

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=6.2e-30  Score=216.09  Aligned_cols=221  Identities=24%  Similarity=0.206  Sum_probs=192.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.++|||+|+|||+++|.++..+|++|.+++|+..+++++++++.-.  ..+|.+.++|+++-++++.+++++++.++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999988643  2348899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |.+|||||...++-+.+.+.+.++..+++|++++++.+++.++.|++..+      .|+|+.+||..+..+..++.+|++
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~------~g~I~~vsS~~a~~~i~GysaYs~  187 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH------LGRIILVSSQLAMLGIYGYSAYSP  187 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc------CcEEEEehhhhhhcCccccccccc
Confidence            99999999999999999999999999999999999999999999998653      469999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +|+|+.+|+..+++|+. ++||+|..+.|+.+.||.+...... ++......   ......++|++|.+++--+
T Consensus       188 sK~alrgLa~~l~qE~i-~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~---g~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  188 SKFALRGLAEALRQELI-KYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE---GGSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHHHHHHh-hcceEEEEEcCCCCCCCccccccccCchheeeec---CCCCCcCHHHHHHHHHhHH
Confidence            99999999999999997 8899999999999987755433221 12111111   1123478999999987655

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-29  Score=215.38  Aligned_cols=218  Identities=19%  Similarity=0.232  Sum_probs=178.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+.+.+.....+.++.++.+|++++++++++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            6789999999999999999999999999999999888777777666666678999999999999877654      3899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||||+....++.+.+.++++..+++|+.+++.+++.+++.|.+..       .++||++||..+..+.++...|+++
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~~SS~~~~~~~~~~~~Y~~s  148 (257)
T PRK09291         76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-------KGKVVFTSSMAGLITGPFTGAYCAS  148 (257)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CceEEEEcChhhccCCCCcchhHHH
Confidence            999999988777888899999999999999999999999999998865       5799999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-------ch-HHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-------PD-EINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      |++++.+++.++.++. +.||++++|+||++.++.......       .. ..........+. ...+++|++..++.++
T Consensus       149 K~a~~~~~~~l~~~~~-~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  226 (257)
T PRK09291        149 KHALEAIAEAMHAELK-PFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVI  226 (257)
T ss_pred             HHHHHHHHHHHHHHHH-hcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHh
Confidence            9999999999999996 789999999999997643211110       00 001101111122 2368888888887766


Q ss_pred             C
Q 022335          246 S  246 (299)
Q Consensus       246 s  246 (299)
                      .
T Consensus       227 ~  227 (257)
T PRK09291        227 P  227 (257)
T ss_pred             c
Confidence            3

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=4.3e-29  Score=215.11  Aligned_cols=221  Identities=20%  Similarity=0.165  Sum_probs=179.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g~id   93 (299)
                      |+++||||+|+||+++++.|+++|++|++++|+.++.+...    +.  .+..+.+|+++.++++++++.+.... +++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            68999999999999999999999999999999987655432    22  36788999999999999999887754 7899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++|||+|.....++.+.+.+++++.+++|+.+++++++.+++.|++.+       .++||++||..+..+.+....|+++
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y~~s  149 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-------EGRIVMTSSVMGLISTPGRGAYAAS  149 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-------CCEEEEEcCcccccCCCCccHHHHH
Confidence            999999987667777889999999999999999999999999998875       5899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++++.++++++.++. .+||++++|+||++.++.....................+.+.+|+|+++.+..+++...
T Consensus       150 K~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        150 KYALEAWSDALRMELR-HSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             HHHHHHHHHHHHHHHh-hcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            9999999999999996 88999999999999755322111110000000000011235799999999999996554

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.8e-28  Score=209.03  Aligned_cols=203  Identities=27%  Similarity=0.317  Sum_probs=174.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+.+++++||||+|+||++++++|+++|+ +|++++|+.++.+.       .+.++.++.+|+++.++++++++.    +
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~----~   71 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA----A   71 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----c
Confidence            35689999999999999999999999999 99999998765443       345789999999999998887764    4


Q ss_pred             CCccEEEEcCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAG-NFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|++||++|. ....++.+.+.+++++.+++|+.+++.+.+++.+.|.+.+       .++||++||..+..+.++..
T Consensus        72 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~~v~~sS~~~~~~~~~~~  144 (238)
T PRK08264         72 SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-------GGAIVNVLSVLSWVNFPNLG  144 (238)
T ss_pred             CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEEcChhhccCCCCch
Confidence            689999999998 4556777889999999999999999999999999998765       68999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      .|+.+|++++++++.++.++. ++||+++++.||.++++.... .             + ....+++++++.++..+..
T Consensus       145 ~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~v~pg~v~t~~~~~-~-------------~-~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        145 TYSASKAAAWSLTQALRAELA-PQGTRVLGVHPGPIDTDMAAG-L-------------D-APKASPADVARQILDALEA  207 (238)
T ss_pred             HhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeCCccccccccc-C-------------C-cCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999996 789999999999997653211 1             0 1147889999998887753

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6e-29  Score=210.38  Aligned_cols=215  Identities=17%  Similarity=0.157  Sum_probs=169.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |+++||||+++||++++++|+++|++|++++|+.+..+.+.    .. .++.++.+|++++++++++++.+.+  +++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ----AL-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH----hc-cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            68999999999999999999999999999999987654432    21 3577889999999999999988754  58999


Q ss_pred             EEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---CCchH
Q 022335           95 LVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---WYQIH  169 (299)
Q Consensus        95 lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---~~~~~  169 (299)
                      +|||+|+...  .++.+.+.++++..+++|+.+++.+.+.+++.|++.        .+.|+++||..+..+.   ..+..
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~~~iv~~ss~~g~~~~~~~~~~~~  146 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--------QGVLAFMSSQLGSVELPDGGEMPL  146 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--------CCEEEEEccCccccccCCCCCccc
Confidence            9999998643  456778899999999999999999999999998753        3789999997765433   35678


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.|+++++.+++ ++||++|+|+||+++|+.....                 ...++++.++.++.++....
T Consensus       147 Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~i~PG~i~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~  208 (225)
T PRK08177        147 YKASKAALNSMTRSFVAELG-EPTLTVLSMHPGWVKTDMGGDN-----------------APLDVETSVKGLVEQIEAAS  208 (225)
T ss_pred             hHHHHHHHHHHHHHHHHHhh-cCCeEEEEEcCCceecCCCCCC-----------------CCCCHHHHHHHHHHHHHhCC
Confidence            99999999999999999997 7899999999999987643211                 11356667777666665443


Q ss_pred             CCccCcEEEeCCc
Q 022335          250 KYVNGTTLIVDGG  262 (299)
Q Consensus       250 ~~~~G~~i~~dgg  262 (299)
                      .-..+.++..+|+
T Consensus       209 ~~~~~~~~~~~~~  221 (225)
T PRK08177        209 GKGGHRFIDYQGE  221 (225)
T ss_pred             ccCCCceeCcCCc
Confidence            2223333444443

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=202.26  Aligned_cols=212  Identities=21%  Similarity=0.196  Sum_probs=172.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++++||||+++||++++++|+++|++|++++|+.+..+.+.    ..  .+.++.+|+++.++++++++++..  +++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            57999999999999999999999999999999987655432    22  356789999999999998876632  47999


Q ss_pred             EEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc---hH
Q 022335           95 LVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ---IH  169 (299)
Q Consensus        95 lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~---~~  169 (299)
                      +|||+|...  .....+.+.++|+..+++|+.+++.+++++.|+|.+.        .++||+++|..+..+....   ..
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~~~  145 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--------GGVLAVLSSRMGSIGDATGTTGWL  145 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--------CCeEEEEcCcccccccccCCCccc
Confidence            999999763  2445677899999999999999999999999998653        4789999998776553322   36


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.+++.++.++.   ++++++|+||+++|++...                 .....+++.+..+..++....
T Consensus       146 Y~~sK~a~~~~~~~~~~~~~---~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~  205 (222)
T PRK06953        146 YRASKAALNDALRAASLQAR---HATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQAT  205 (222)
T ss_pred             cHHhHHHHHHHHHHHhhhcc---CcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcC
Confidence            99999999999999998863   7999999999998654221                 112477889999888776666


Q ss_pred             CCccCcEEEeCCc
Q 022335          250 KYVNGTTLIVDGG  262 (299)
Q Consensus       250 ~~~~G~~i~~dgg  262 (299)
                      ...+|+.+..|++
T Consensus       206 ~~~~~~~~~~~~~  218 (222)
T PRK06953        206 RRDNGRFFQYDGV  218 (222)
T ss_pred             cccCceEEeeCCc
Confidence            7788999988876

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.4e-27  Score=197.83  Aligned_cols=219  Identities=22%  Similarity=0.246  Sum_probs=177.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..+...++.    .++.++.+|+++.+++++++++    ++++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~----~~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQ----LGRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHh----cCCCC
Confidence            578999999999999999999999 99999999987665544332    2478899999999998887765    35899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ++||++|.....++.+.+.++|.+.+++|+.+++.+.+.+++.|++.        .+++|++||..+..+.++...|+.+
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--------~~~~v~~ss~~~~~~~~~~~~y~~~  145 (227)
T PRK08219         74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--------HGHVVFINSGAGLRANPGWGSYAAS  145 (227)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--------CCeEEEEcchHhcCcCCCCchHHHH
Confidence            99999998766677788889999999999999999999999999875        3789999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN  253 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  253 (299)
                      |++++.+++.++.++. .. |++++|+||++.++... ...     .......+..++.+++|+++.++++++...   .
T Consensus       146 K~a~~~~~~~~~~~~~-~~-i~~~~i~pg~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~dva~~~~~~l~~~~---~  214 (227)
T PRK08219        146 KFALRALADALREEEP-GN-VRVTSVHPGRTDTDMQR-GLV-----AQEGGEYDPERYLRPETVAKAVRFAVDAPP---D  214 (227)
T ss_pred             HHHHHHHHHHHHHHhc-CC-ceEEEEecCCccchHhh-hhh-----hhhccccCCCCCCCHHHHHHHHHHHHcCCC---C
Confidence            9999999999999885 44 99999999998654221 111     111112233567899999999999996543   4


Q ss_pred             CcEEEeC
Q 022335          254 GTTLIVD  260 (299)
Q Consensus       254 G~~i~~d  260 (299)
                      |++.++.
T Consensus       215 ~~~~~~~  221 (227)
T PRK08219        215 AHITEVV  221 (227)
T ss_pred             CccceEE
Confidence            4444443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=3.8e-28  Score=196.01  Aligned_cols=239  Identities=19%  Similarity=0.150  Sum_probs=183.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..++++|+||+|+|||..++..+.+.+-......++....+ ........+........|++...-..++++..++.+++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            35889999999999999888888877665443333322222 11111111222333456778788888999999999999


Q ss_pred             ccEEEEcCCCCCC-CCC--CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           92 LDILVNAAAGNFL-VSA--EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        92 id~lv~~ag~~~~-~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      .|++|||||...+ ...  +..+.++|++.++.|+++.+.+.+.++|.+++.+.      .+.|||+||.+...|+..++
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~------~~~vVnvSS~aav~p~~~wa  156 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV------NGNVVNVSSLAAVRPFSSWA  156 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc------cCeEEEecchhhhccccHHH
Confidence            9999999997655 222  36788999999999999999999999999988741      58899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC----CCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM----NKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +||++|+|.++|++.||.|=  +.+|++.++.||.++|.+..    ..-..++....+...-..+++.+|...|+.+..|
T Consensus       157 ~yc~~KaAr~m~f~~lA~EE--p~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L  234 (253)
T KOG1204|consen  157 AYCSSKAARNMYFMVLASEE--PFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKL  234 (253)
T ss_pred             HhhhhHHHHHHHHHHHhhcC--ccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHH
Confidence            99999999999999999983  46999999999999876532    1112344445566666777889999999999998


Q ss_pred             cCCCCCCccCcEEEeC
Q 022335          245 TSDTGKYVNGTTLIVD  260 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~d  260 (299)
                      +-... +++|+++...
T Consensus       235 ~e~~~-f~sG~~vdy~  249 (253)
T KOG1204|consen  235 LEKGD-FVSGQHVDYY  249 (253)
T ss_pred             HHhcC-cccccccccc
Confidence            85433 8999988754

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=3.3e-25  Score=200.62  Aligned_cols=199  Identities=16%  Similarity=0.190  Sum_probs=151.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++||+++||||++|||++++++|+++|++|++++|+.++++..   +.....++..+.+|+++++++.+.       ++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~-------l~  244 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLPVKTLHWQVGQEAALAEL-------LE  244 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH-------hC
Confidence            46799999999999999999999999999999999987655432   222234577889999999887654       35


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||||+...   .+.+.+++++.+++|+.+++.++++++|.|++++.   ...++.+|++|+ ... +.+....|
T Consensus       245 ~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~---~~~~~iiVn~Ss-a~~-~~~~~~~Y  316 (406)
T PRK07424        245 KVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRD---KATKEVWVNTSE-AEV-NPAFSPLY  316 (406)
T ss_pred             CCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCeEEEEEcc-ccc-cCCCchHH
Confidence            89999999997543   35678999999999999999999999999987541   011345677665 333 33456789


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      ++||+|+.++++ +.++.   .++.+..+.||+++++..                 +. ...+||++|+.+++.++...
T Consensus       317 ~ASKaAl~~l~~-l~~~~---~~~~I~~i~~gp~~t~~~-----------------~~-~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        317 ELSKRALGDLVT-LRRLD---APCVVRKLILGPFKSNLN-----------------PI-GVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHHH-HHHhC---CCCceEEEEeCCCcCCCC-----------------cC-CCCCHHHHHHHHHHHHHCCC
Confidence            999999999985 44432   356777788998875421                 11 24699999999999996554

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=2.3e-25  Score=235.69  Aligned_cols=182  Identities=17%  Similarity=0.149  Sum_probs=159.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCCh-------------------------------------------
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRK-------------------------------------------   48 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~-------------------------------------------   48 (299)
                      +|+++|||||++|||.+++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982                                           


Q ss_pred             ----hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhH
Q 022335           49 ----QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV  124 (299)
Q Consensus        49 ----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~  124 (299)
                          .+.....+++.+.+.++.++.||++|.++++++++++.+. +++|+||||||+.....+.+.+.++|+++|++|+.
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                1122334445556778999999999999999999999887 68999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc
Q 022335          125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI  204 (299)
Q Consensus       125 ~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v  204 (299)
                      |.+++++++.+.+           .++||++||..+..+.+++..|+++|++++.+++.++.++.   +++|++|+||++
T Consensus      2155 G~~~Ll~al~~~~-----------~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~---~irV~sI~wG~w 2220 (2582)
T TIGR02813      2155 GLLSLLAALNAEN-----------IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP---SAKVMSFNWGPW 2220 (2582)
T ss_pred             HHHHHHHHHHHhC-----------CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEECCee
Confidence            9999998887643           35799999999999999999999999999999999999874   599999999999


Q ss_pred             CCCCC
Q 022335          205 GDTPG  209 (299)
Q Consensus       205 ~t~~~  209 (299)
                      ++.+.
T Consensus      2221 dtgm~ 2225 (2582)
T TIGR02813      2221 DGGMV 2225 (2582)
T ss_pred             cCCcc
Confidence            86543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.2e-23  Score=170.24  Aligned_cols=175  Identities=21%  Similarity=0.217  Sum_probs=149.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHH---HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAA---VSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~---~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++||||+++||.+++++|+++|+ .|++++|+.+..+..   .+++...+.++.++.+|++++++++++++++...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 578888876543332   345555566788999999999999999999999899


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||+|......+.+.+.++++..+++|+.+++.+.+++.+    ..       .++||++||..+..+.++...|
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~ii~~ss~~~~~~~~~~~~y  149 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP-------LDFFVLFSSVAGVLGNPGQANY  149 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC-------cceEEEEccHHHhcCCCCchhh
Confidence            999999999987666777888999999999999999999998832    22       4789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG  205 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~  205 (299)
                      +++|+++..+++.++     ..|++++++.||+++
T Consensus       150 ~~sk~~~~~~~~~~~-----~~~~~~~~~~~g~~~  179 (180)
T smart00822      150 AAANAFLDALAAHRR-----ARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHHHHH-----hcCCceEEEeecccc
Confidence            999999999987654     447889999999884

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=1.9e-22  Score=187.17  Aligned_cols=227  Identities=11%  Similarity=0.050  Sum_probs=166.0

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-----C----CcEEEEEcCCCCHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-----G----IKAVGFEGDVRRQEH   77 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-----~----~~v~~~~~Dl~~~~~   77 (299)
                      ......+||++|||||+|+||++++++|+++|++|++++|+.+.++.+.+++.+.     +    .++.++.+|+++.++
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es  152 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ  152 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence            3444567999999999999999999999999999999999998888777665431     1    358899999999998


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +++.       ++++|+||||+|....      ...++...+++|+.+..++++++...    +       .++||++||
T Consensus       153 I~~a-------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-------VgRIV~VSS  208 (576)
T PLN03209        153 IGPA-------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA----K-------VNHFILVTS  208 (576)
T ss_pred             HHHH-------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh----C-------CCEEEEEcc
Confidence            7653       4589999999986431      12246778999999999998887542    2       479999999


Q ss_pred             cccc-ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHH
Q 022335          158 TLHY-TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       158 ~~~~-~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                      ..+. .+.+.. .|. +|+++..+.+.+..++. ..||++++|+||++.++... ....... .......+.++..+.+|
T Consensus       209 iga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~-~sGIrvTIVRPG~L~tp~d~-~~~t~~v-~~~~~d~~~gr~isreD  283 (576)
T PLN03209        209 LGTNKVGFPAA-ILN-LFWGVLCWKRKAEEALI-ASGLPYTIVRPGGMERPTDA-YKETHNL-TLSEEDTLFGGQVSNLQ  283 (576)
T ss_pred             chhcccCcccc-chh-hHHHHHHHHHHHHHHHH-HcCCCEEEEECCeecCCccc-cccccce-eeccccccCCCccCHHH
Confidence            8764 232222 244 78888888888888886 78999999999999654211 1111111 11112245677889999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ||+.+++++++.. .-.++++.+-.+.
T Consensus       284 VA~vVvfLasd~~-as~~kvvevi~~~  309 (576)
T PLN03209        284 VAELMACMAKNRR-LSYCKVVEVIAET  309 (576)
T ss_pred             HHHHHHHHHcCch-hccceEEEEEeCC
Confidence            9999999998432 2345666665554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.90  E-value=9.4e-22  Score=175.30  Aligned_cols=212  Identities=17%  Similarity=0.135  Sum_probs=155.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |+||++|||||+|+||++++++|+++|  ++|++++|+....+.+.+++.  ..++.++.+|+++.+++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            568999999999999999999999986  789999988765444433332  2468899999999999888765      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                       ++|+|||+||.... +..+.+   ..+.+++|+.+++++++++.+.    +       .++||++||.....|   ...
T Consensus        74 -~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~----~-------~~~iV~~SS~~~~~p---~~~  134 (324)
T TIGR03589        74 -GVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAIDN----G-------VKRVVALSTDKAANP---INL  134 (324)
T ss_pred             -cCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHHc----C-------CCEEEEEeCCCCCCC---CCH
Confidence             58999999996432 222222   3468999999999999998752    2       468999999765544   467


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc---CCC------CCCCCHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY---MPL------YKLGEKWDIAMA  240 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~dva~~  240 (299)
                      |++||++.+.+++.++.+++ ..|+++++++||.+..+..  .. ...+.......   .+.      +.+..++|++++
T Consensus       135 Y~~sK~~~E~l~~~~~~~~~-~~gi~~~~lR~g~v~G~~~--~~-i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a  210 (324)
T TIGR03589       135 YGATKLASDKLFVAANNISG-SKGTRFSVVRYGNVVGSRG--SV-VPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNF  210 (324)
T ss_pred             HHHHHHHHHHHHHHHHhhcc-ccCcEEEEEeecceeCCCC--Cc-HHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHH
Confidence            99999999999999888775 7799999999999976532  11 11222222111   121      236789999999


Q ss_pred             HHHHcCCCCCCccCcEE
Q 022335          241 ALYLTSDTGKYVNGTTL  257 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i  257 (299)
                      ++..+...   ..|+.+
T Consensus       211 ~~~al~~~---~~~~~~  224 (324)
T TIGR03589       211 VLKSLERM---LGGEIF  224 (324)
T ss_pred             HHHHHhhC---CCCCEE
Confidence            98887532   235555

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=2.8e-21  Score=172.32  Aligned_cols=221  Identities=14%  Similarity=0.113  Sum_probs=157.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +|++|||||+|+||++++++|+++|++|++++|+....+.........  ..++.++.+|+++.++++++++       +
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~   77 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------G   77 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------C
Confidence            789999999999999999999999999999988876554432222211  2468899999999999888776       6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW------  165 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~------  165 (299)
                      +|+|||+||....    ..+.+++.+.+++|+.+++++++++.+.+.          .++||++||..+..+..      
T Consensus        78 ~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~----------~~~iv~~SS~~~~~~~~~~~~~~  143 (325)
T PLN02989         78 CETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVSS----------VKRVILTSSMAAVLAPETKLGPN  143 (325)
T ss_pred             CCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC----------ceEEEEecchhheecCCccCCCC
Confidence            8999999996432    223355778999999999999999876531          36899999986543210      


Q ss_pred             --------C--------chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--CchHHhHHHHhcCC
Q 022335          166 --------Y--------QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDYMP  227 (299)
Q Consensus       166 --------~--------~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~~  227 (299)
                              .        ...|+.||.+.+.+++.++.++    |+++++++|+.+.++......  .............+
T Consensus       144 ~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~  219 (325)
T PLN02989        144 DVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN----EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP  219 (325)
T ss_pred             CccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc----CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC
Confidence                    0        1469999999999998877543    799999999999766543221  11112221112222


Q ss_pred             C----CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          228 L----YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       228 ~----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      .    +.+...+|+|++++.++....  . +..++++|+
T Consensus       220 ~~~~~r~~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~  255 (325)
T PLN02989        220 FNTTHHRFVDVRDVALAHVKALETPS--A-NGRYIIDGP  255 (325)
T ss_pred             CCCcCcCeeEHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence            2    346778999999988875432  1 335677443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=6.5e-22  Score=161.63  Aligned_cols=174  Identities=23%  Similarity=0.265  Sum_probs=138.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK---QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++|||||.+|||..+++.|+++|+ +|++++|+.   ...+...+++++.+.++.+++||++++++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            799999999999999999999976 599999983   3455678888888899999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      ++.|||++|......+.+.+.++++.++...+.+.+++.+++.+    .+       -..+|.+||+.+..+.+++..|+
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~-------l~~~i~~SSis~~~G~~gq~~Ya  150 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RP-------LDFFILFSSISSLLGGPGQSAYA  150 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TT-------TSEEEEEEEHHHHTT-TTBHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CC-------CCeEEEECChhHhccCcchHhHH
Confidence            99999999998888999999999999999999999999888865    11       46799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG  205 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~  205 (299)
                      ++.++++.|++..+.     .|.++.+|.-|..+
T Consensus       151 aAN~~lda~a~~~~~-----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  151 AANAFLDALARQRRS-----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHHHHHH-----TTSEEEEEEE-EBS
T ss_pred             HHHHHHHHHHHHHHh-----CCCCEEEEEccccC
Confidence            999999999886543     36778888877663

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=5.4e-21  Score=169.10  Aligned_cols=254  Identities=18%  Similarity=0.094  Sum_probs=168.3

Q ss_pred             CCCEEEEecCCChHHHH--HHHHHHHcCCeEEEEeCChhHH------------HHHHHHHHhcCCcEEEEEcCCCCHHHH
Q 022335           13 KGKVALITGGGSGIGFE--ISTQFGKHGASVAIMGRRKQVL------------DAAVSALRSLGIKAVGFEGDVRRQEHA   78 (299)
Q Consensus        13 ~~k~vlItGas~giG~a--ia~~la~~G~~Vv~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~Dl~~~~~v   78 (299)
                      .+|++||||+++|||.+  +|+.| ++|++|+++++..+..            +...+.+.+.+..+..++||+++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            37999999999999999  89999 9999999988543221            234445555566788899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCCCC-----------------CC-----------------CCCHHHHHHHHHhhhH
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFLVS-----------------AE-----------------DLSPNGFRTVMDIDSV  124 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n~~  124 (299)
                      +++++++.+.+|++|+||||+|......                 +.                 ..+.++++.+++  +.
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~--vM  196 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK--VM  196 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH--hh
Confidence            9999999999999999999999763311                 11                 123344444332  23


Q ss_pred             HH-----HHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc--hHHHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 022335          125 GT-----FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ--IHVAAAKAAVDAITRNLALEWGADYDIRVN  197 (299)
Q Consensus       125 ~~-----~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~e~~~~~gi~v~  197 (299)
                      |.     |.-.....+.|.         +++++|.+|+..+....|.|  ..-+.+|++|+.-++.|+.+|+ ++|||+|
T Consensus       197 ggedw~~Wi~al~~a~lla---------~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~-~~giran  266 (398)
T PRK13656        197 GGEDWELWIDALDEAGVLA---------EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLA-AKGGDAY  266 (398)
T ss_pred             ccchHHHHHHHHHhccccc---------CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEE
Confidence            32     222333444442         26899999999998888877  5899999999999999999998 8899999


Q ss_pred             EEeCCccCCCCCCCCCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCc----
Q 022335          198 GIAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLP----  272 (299)
Q Consensus       198 ~i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~----  272 (299)
                      ++.+|.+.|.. ...++. .-......+-.  +.-+.-|.+.+-+..|.++.--. .|..-.+|..-.+....|..    
T Consensus       267 ~i~~g~~~T~A-ss~Ip~~~ly~~~l~kvm--k~~g~he~~ieq~~rl~~~~ly~-~~~~~~~d~~~r~r~d~~el~~~v  342 (398)
T PRK13656        267 VSVLKAVVTQA-SSAIPVMPLYISLLFKVM--KEKGTHEGCIEQIYRLFSERLYR-DGAIPEVDEEGRLRLDDWELRPDV  342 (398)
T ss_pred             EEecCcccchh-hhcCCCcHHHHHHHHHHH--HhcCCCCChHHHHHHHHHHhccc-CCCCCCcCCcCCcccchhhcCHHH
Confidence            99999997643 333322 22111111111  11133445666666776542111 23333355444444444433    


Q ss_pred             hhHHHHHhHhh
Q 022335          273 KDAVKQLSRTV  283 (299)
Q Consensus       273 ~~~~~~~~~~~  283 (299)
                      +....++|..+
T Consensus       343 q~~v~~~~~~~  353 (398)
T PRK13656        343 QAAVRELWPQV  353 (398)
T ss_pred             HHHHHHHHHHh
Confidence            33345555544

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.88  E-value=8.9e-21  Score=170.80  Aligned_cols=231  Identities=15%  Similarity=0.095  Sum_probs=162.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |+||++|||||+|+||.++++.|+++|++|++++|+..........+. ...++.++.+|+++.+++.+++++.     +
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   75 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K   75 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence            568999999999999999999999999999999998765443333332 2346778999999999999988864     6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---------  162 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---------  162 (299)
                      +|+|||+|+....    ..+.+++...+++|+.+++++++++.+.   ..       .++||++||...+.         
T Consensus        76 ~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~-------~~~iv~~SS~~vyg~~~~~~~~~  141 (349)
T TIGR02622        76 PEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GS-------VKAVVNVTSDKCYRNDEWVWGYR  141 (349)
T ss_pred             CCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CC-------CCEEEEEechhhhCCCCCCCCCc
Confidence            8999999985321    2344567788999999999999987421   11       35899999964321         


Q ss_pred             ---cCCCchHHHHHHHHHHHHHHHHHHHhcCC---CCeEEEEEeCCccCCCCCCCC-CCchHHhHHHHhc--------CC
Q 022335          163 ---ASWYQIHVAAAKAAVDAITRNLALEWGAD---YDIRVNGIAPGPIGDTPGMNK-LAPDEINSKARDY--------MP  227 (299)
Q Consensus       163 ---~~~~~~~Y~~sKaal~~l~~~la~e~~~~---~gi~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~--------~~  227 (299)
                         +..+...|+.+|.+.+.+++.++.++...   +|+++++++|+.+.++..... .............        ..
T Consensus       142 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  221 (349)
T TIGR02622       142 ETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDA  221 (349)
T ss_pred             cCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCc
Confidence               12345689999999999999999887412   489999999999976532111 1111222222111        12


Q ss_pred             CCCCCCHHHHHHHHHHHcCCC--CCCccCcEEEeCCc
Q 022335          228 LYKLGEKWDIAMAALYLTSDT--GKYVNGTTLIVDGG  262 (299)
Q Consensus       228 ~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgg  262 (299)
                      .+.+...+|++++++.++...  .....|+.+++..|
T Consensus       222 ~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       222 TRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             ccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            334678889999988776421  11123567888654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.87  E-value=7.5e-21  Score=155.85  Aligned_cols=191  Identities=19%  Similarity=0.243  Sum_probs=162.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCe-----EEEEeCChhHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGAS-----VAIMGRRKQVLDAAVSALRSLG----IKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~-----Vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      -|++||||+++|||.+||.+|.+....     +++++|+.++.|+.+..+.+..    .++.++.+|+++..||.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            689999999999999999999987543     7789999999999999998763    3688999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCC---------------------------CCCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSA---------------------------EDLSPNGFRTVMDIDSVGTFTMCHEALKYL  137 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~---------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m  137 (299)
                      +.++|.++|.+..|||+.....+                           -..+.+++..+|+.|+.|++++.+.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999997543211                           123457888999999999999999999999


Q ss_pred             HhcCCCCCCCCCceEEEeccccccc---------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCC
Q 022335          138 KKGGPGRSSAGGGSILNISATLHYT---------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP  208 (299)
Q Consensus       138 ~~~~~~~~~~~~g~iv~vsS~~~~~---------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~  208 (299)
                      ..+.       ...+|++||..+..         .+.+...|+.||.+.+-|.-++-+.+. +.|+.-.+++||.. ++.
T Consensus       163 ~~~~-------~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~-~~g~~qyvv~pg~~-tt~  233 (341)
T KOG1478|consen  163 CHSD-------NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFK-PLGINQYVVQPGIF-TTN  233 (341)
T ss_pred             hcCC-------CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccc-ccchhhhcccCcee-ecc
Confidence            9876       56899999987643         446778899999999999988888885 88999999999987 444


Q ss_pred             CCCCC
Q 022335          209 GMNKL  213 (299)
Q Consensus       209 ~~~~~  213 (299)
                      +..++
T Consensus       234 ~~~~~  238 (341)
T KOG1478|consen  234 SFSEY  238 (341)
T ss_pred             hhhhh
Confidence            44443

>PRK06720 hypothetical protein; Provisional

Probab=99.86  E-value=3.2e-20  Score=149.36  Aligned_cols=149  Identities=21%  Similarity=0.219  Sum_probs=124.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+.++...+++...+.+..++.+|+++.++++++++++.+.+|
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999998888887788876666788899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      ++|++|||||+... ..+.+.+.++ ++  .+|+.+.++.++.+.+.|.++.+.-.--+.|++..||+.....
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            99999999998765 3444445444 33  6788888999999999999876443333468999999876544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.84  E-value=5.6e-19  Score=158.53  Aligned_cols=232  Identities=17%  Similarity=0.058  Sum_probs=153.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-----LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +++++++|||||+|+||.+++++|+++|++|++++|+.+.     ++.+..+....+.++.++.+|+++.++++++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            5678999999999999999999999999999999987542     22221111112346889999999999999988865


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--  163 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--  163 (299)
                           ++|+|||+|+.....    ...+..+..+++|+.++.++++++.+.+.+..      .-.++|++||...+..  
T Consensus        83 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~------~~~~~v~~Ss~~vyg~~~  147 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETG------RQIKYYQAGSSEMYGSTP  147 (340)
T ss_pred             -----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccc------cceeEEEeccHHHhCCCC
Confidence                 689999999975321    12234467789999999999999987754321      0136889987543321  


Q ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHHhcCC---CCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh--------
Q 022335          164 --------SWYQIHVAAAKAAVDAITRNLALEWGAD---YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD--------  224 (299)
Q Consensus       164 --------~~~~~~Y~~sKaal~~l~~~la~e~~~~---~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--------  224 (299)
                              ......|+.||.+.+.+++.++.+++ -   .++.++.+.|+... . ..... ..........        
T Consensus       148 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~~~~~~gp~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~  223 (340)
T PLN02653        148 PPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYG-LFACNGILFNHESPRRGE-N-FVTRK-ITRAVGRIKVGLQKKLFL  223 (340)
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC-CeEEEeeeccccCCCCCc-c-cchhH-HHHHHHHHHcCCCCceEe
Confidence                    11356799999999999999988763 2   12333444454321 1 00000 0010111111        


Q ss_pred             --cCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          225 --YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       225 --~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                        ....+.+...+|+|++++.++...    .+..+++.+|...
T Consensus       224 g~g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~  262 (340)
T PLN02653        224 GNLDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESH  262 (340)
T ss_pred             CCCcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCce
Confidence              112235678999999999888532    1456777766543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=1.1e-18  Score=155.47  Aligned_cols=237  Identities=17%  Similarity=0.137  Sum_probs=159.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS--LGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++++||||+|+||.+++++|+++|++|+++.|+.+..+........  ...++.++.+|+++.++++++++       
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   76 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------   76 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------
Confidence            489999999999999999999999999999999887654443332221  12468899999999999888876       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-cC-----
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-AS-----  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~~-----  164 (299)
                      ++|+|||+|+..... .    .+...+.+++|+.++.++++++...   ..       -.+||++||..... +.     
T Consensus        77 ~~d~vih~A~~~~~~-~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~-------v~rvV~~SS~~~~~~~~~~~~~  141 (322)
T PLN02986         77 GCDAVFHTASPVFFT-V----KDPQTELIDPALKGTINVLNTCKET---PS-------VKRVILTSSTAAVLFRQPPIEA  141 (322)
T ss_pred             CCCEEEEeCCCcCCC-C----CCchhhhhHHHHHHHHHHHHHHHhc---CC-------ccEEEEecchhheecCCccCCC
Confidence            589999999864221 1    1223567899999999999886432   11       35899999976431 11     


Q ss_pred             -----------C-----CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhcC-
Q 022335          165 -----------W-----YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYM-  226 (299)
Q Consensus       165 -----------~-----~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~-  226 (299)
                                 +     ....|+.||.+.+.+++.+..++    |+++++++|+.+.++....... .......+.... 
T Consensus       142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~----~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  217 (322)
T PLN02986        142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN----GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN  217 (322)
T ss_pred             CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh----CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC
Confidence                       0     12569999999888888776543    7999999999997664332211 112222222111 


Q ss_pred             ----CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCchhHHHHHhHhhh
Q 022335          227 ----PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVE  284 (299)
Q Consensus       227 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~~~~~~~~~~~  284 (299)
                          ....+...+|+|++++..+....  ..| .+++.|+ .     .......+.+.+.+.
T Consensus       218 ~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~-~-----~s~~e~~~~i~~~~~  270 (322)
T PLN02986        218 LFNNRFYRFVDVRDVALAHIKALETPS--ANG-RYIIDGP-I-----MSVNDIIDILRELFP  270 (322)
T ss_pred             CCCCcCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC-C-----CCHHHHHHHHHHHCC
Confidence                12346889999999988885432  234 5666432 2     233444555555444

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.83  E-value=4.2e-19  Score=164.16  Aligned_cols=232  Identities=13%  Similarity=0.094  Sum_probs=156.8

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh---H--------------HHHHHHHHHh-cCCcEEE
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ---V--------------LDAAVSALRS-LGIKAVG   67 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~---~--------------~~~~~~~~~~-~~~~v~~   67 (299)
                      |-+.+.++++++|||||+|+||++++++|+++|++|+++++...   .              .+.+ +.+.+ .+.++.+
T Consensus        39 ~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~v~~  117 (442)
T PLN02572         39 PGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKEIEL  117 (442)
T ss_pred             CCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCcceE
Confidence            44556788999999999999999999999999999999874321   0              0111 11111 1346889


Q ss_pred             EEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCC
Q 022335           68 FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSA  147 (299)
Q Consensus        68 ~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~  147 (299)
                      +.+|+++.++++++++..     ++|+|||+|+... ......+.++++..+++|+.+++++++++...-   .      
T Consensus       118 v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v------  182 (442)
T PLN02572        118 YVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---P------  182 (442)
T ss_pred             EECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---C------
Confidence            999999999999988864     7999999997532 233344455677888999999999999876531   0      


Q ss_pred             CCceEEEecccccccc------------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCc
Q 022335          148 GGGSILNISATLHYTA------------------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGP  203 (299)
Q Consensus       148 ~~g~iv~vsS~~~~~~------------------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~  203 (299)
                       ..++|++||...+..                        ......|+.||.+.+.+++..+..    +|+++.+++|+.
T Consensus       183 -~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~----~gl~~v~lR~~~  257 (442)
T PLN02572        183 -DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA----WGIRATDLNQGV  257 (442)
T ss_pred             -CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh----cCCCEEEEeccc
Confidence             247999998754321                        112357999999998888876654    479999999999


Q ss_pred             cCCCCCCCCC-----------------CchHHhHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCCCCCccC--c
Q 022335          204 IGDTPGMNKL-----------------APDEINSKARDYM---------PLYKLGEKWDIAMAALYLTSDTGKYVNG--T  255 (299)
Q Consensus       204 v~t~~~~~~~-----------------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G--~  255 (299)
                      +..+......                 ....+........         ..+.+...+|++++++.++....  ..|  .
T Consensus       258 vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~  335 (442)
T PLN02572        258 VYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFR  335 (442)
T ss_pred             ccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCcee
Confidence            9765422110                 0001111111111         11356889999999988885321  234  3


Q ss_pred             EEEeC
Q 022335          256 TLIVD  260 (299)
Q Consensus       256 ~i~~d  260 (299)
                      .+++.
T Consensus       336 i~Nig  340 (442)
T PLN02572        336 VFNQF  340 (442)
T ss_pred             EEEeC
Confidence            56653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.83  E-value=1.4e-18  Score=156.77  Aligned_cols=231  Identities=16%  Similarity=0.083  Sum_probs=155.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEE-EEeCChhH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVA-IMGRRKQV--LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv-~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++|||||+|+||.++++.|.++|+.++ ++++....  ..... .+ ..+.++.++.+|+++.++++++++..     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5799999999999999999999998855 45543221  11111 11 11235788899999999998887752     6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---------  162 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---------  162 (299)
                      +|+|||+||....    +.+.++++..+++|+.++.++++++.+.|......  .....++|++||...+.         
T Consensus        75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~--~~~~~~~i~~SS~~vyg~~~~~~~~~  148 (355)
T PRK10217         75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED--KKSAFRFHHISTDEVYGDLHSTDDFF  148 (355)
T ss_pred             CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhccccc--ccCceEEEEecchhhcCCCCCCCCCc
Confidence            9999999986432    22345678899999999999999998764321000  00025899999854321         


Q ss_pred             ----cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc--C-------CCC
Q 022335          163 ----ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY--M-------PLY  229 (299)
Q Consensus       163 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~  229 (299)
                          +......|+.||.+.+.+++.++.++    ++++..+.|+.+..+..................  .       ..+
T Consensus       149 ~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  224 (355)
T PRK10217        149 TETTPYAPSSPYSASKASSDHLVRAWLRTY----GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIR  224 (355)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeee
Confidence                22345689999999999999987765    588888999888655432111111111211111  1       123


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       230 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+...+|++.++..++...   ..|..+++.++..+
T Consensus       225 ~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        225 DWLYVEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             CcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            4688999999998887542   35788888877653

>PLN02583 cinnamoyl-CoA reductase

Probab=99.82  E-value=2.6e-18  Score=151.33  Aligned_cols=204  Identities=11%  Similarity=0.049  Sum_probs=142.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV--LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++++|||||+|+||++++++|+++|++|+++.|+.+.  .+.....+...+.++.++.+|+++.+++.+.+.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            47899999999999999999999999999999986432  222223332223468889999999999876654       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS------  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~------  164 (299)
                      ++|.++|.++...     +.. .++++.+++|+.+++++++++.+.+.          .++||++||..+....      
T Consensus        78 ~~d~v~~~~~~~~-----~~~-~~~~~~~~~nv~gt~~ll~aa~~~~~----------v~riV~~SS~~a~~~~~~~~~~  141 (297)
T PLN02583         78 GCSGLFCCFDPPS-----DYP-SYDEKMVDVEVRAAHNVLEACAQTDT----------IEKVVFTSSLTAVIWRDDNIST  141 (297)
T ss_pred             CCCEEEEeCccCC-----ccc-ccHHHHHHHHHHHHHHHHHHHHhcCC----------ccEEEEecchHheecccccCCC
Confidence            6899998765321     111 23578999999999999999976531          3689999998654211      


Q ss_pred             --------CC--c------hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc--C
Q 022335          165 --------WY--Q------IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY--M  226 (299)
Q Consensus       165 --------~~--~------~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--~  226 (299)
                              +.  .      ..|+.||...+.+++.++.+    +|+++++|+|+.+.++......   .........  .
T Consensus       142 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~gi~~v~lrp~~v~Gp~~~~~~---~~~~~~~~~~~~  214 (297)
T PLN02583        142 QKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD----RGVNMVSINAGLLMGPSLTQHN---PYLKGAAQMYEN  214 (297)
T ss_pred             CCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH----hCCcEEEEcCCcccCCCCCCch---hhhcCCcccCcc
Confidence                    00  0      15999999888888777644    3799999999999765432111   000000000  0


Q ss_pred             CCCCCCCHHHHHHHHHHHcC
Q 022335          227 PLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       227 ~~~~~~~~~dva~~~~~l~s  246 (299)
                      ....+...+|+|++++..+.
T Consensus       215 ~~~~~v~V~Dva~a~~~al~  234 (297)
T PLN02583        215 GVLVTVDVNFLVDAHIRAFE  234 (297)
T ss_pred             cCcceEEHHHHHHHHHHHhc
Confidence            11236889999999988885

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.82  E-value=3.8e-18  Score=153.95  Aligned_cols=214  Identities=16%  Similarity=0.076  Sum_probs=149.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..++++|||||+|.||.+++++|+++|++|++++|+.+..+.....+.. +.++.++.+|+++.+++.++++       +
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------G   79 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------C
Confidence            4588999999999999999999999999999999987665555444432 4568899999999999888765       5


Q ss_pred             ccEEEEcCCCCCCCC-CCCCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----
Q 022335           92 LDILVNAAAGNFLVS-AEDLSPNGF--RTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----  164 (299)
Q Consensus        92 id~lv~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----  164 (299)
                      +|+|||+|+...... ....+.+.+  ..++++|+.++.++++++.+..   .       .++||++||...+...    
T Consensus        80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~-------~~~~v~~SS~~vyg~~~~~~  149 (353)
T PLN02896         80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T-------VKRVVFTSSISTLTAKDSNG  149 (353)
T ss_pred             CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C-------ccEEEEEechhhccccccCC
Confidence            899999999754321 122223332  4567888899999999886542   1       3589999997554211    


Q ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc--hHHhHH
Q 022335          165 ---------------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP--DEINSK  221 (299)
Q Consensus       165 ---------------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~  221 (299)
                                           +....|+.||.+.+.+++.++.++    |+++.+++|+.+..+.....++.  ......
T Consensus       150 ~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~  225 (353)
T PLN02896        150 RWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN----GIDLVSVITTTVAGPFLTPSVPSSIQVLLSP  225 (353)
T ss_pred             CCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCcccCCCcCCCCCchHHHHHHH
Confidence                                 011379999999999998777554    79999999998876643322221  111111


Q ss_pred             HHhcC---C----------CCCCCCHHHHHHHHHHHcCC
Q 022335          222 ARDYM---P----------LYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       222 ~~~~~---~----------~~~~~~~~dva~~~~~l~s~  247 (299)
                      .....   +          .+.+...+|+|++++.++..
T Consensus       226 ~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        226 ITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             hcCCccccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence            00100   0          11467899999999988853

>PLN02650 dihydroflavonol-4-reductase

Probab=99.82  E-value=1.9e-18  Score=155.74  Aligned_cols=207  Identities=12%  Similarity=0.048  Sum_probs=148.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .+++|||||+|.||.+++++|+++|++|++++|+.+..+.+.......  ..++.++.+|+++.+.++++++       .
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~   77 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------G   77 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------C
Confidence            678999999999999999999999999999999876555443322211  2358889999999999888776       5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----C--
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----W--  165 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----~--  165 (299)
                      +|+|||+|+.....   .  .+.++..+++|+.++.++++++.+...          ..+||++||.....+.    +  
T Consensus        78 ~d~ViH~A~~~~~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~----------~~r~v~~SS~~~~~~~~~~~~~~  142 (351)
T PLN02650         78 CTGVFHVATPMDFE---S--KDPENEVIKPTVNGMLSIMKACAKAKT----------VRRIVFTSSAGTVNVEEHQKPVY  142 (351)
T ss_pred             CCEEEEeCCCCCCC---C--CCchhhhhhHHHHHHHHHHHHHHhcCC----------ceEEEEecchhhcccCCCCCCcc
Confidence            89999999854211   1  122356789999999999999875421          2579999997533210    0  


Q ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHH----Hh-
Q 022335          166 ----------------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA----RD-  224 (299)
Q Consensus       166 ----------------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~----~~-  224 (299)
                                      ....|+.||.+.+.+++.++.++    |++++.++|+.+.++......... .....    .. 
T Consensus       143 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~v~Gp~~~~~~~~~-~~~~~~~~~~~~  217 (351)
T PLN02650        143 DEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN----GLDFISIIPTLVVGPFISTSMPPS-LITALSLITGNE  217 (351)
T ss_pred             CcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc----CCeEEEECCCceECCCCCCCCCcc-HHHHHHHhcCCc
Confidence                            11379999999999998887653    799999999999776533322221 11111    00 


Q ss_pred             ----cCCCCCCCCHHHHHHHHHHHcCC
Q 022335          225 ----YMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       225 ----~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                          ....+.+...+|+|++++.++..
T Consensus       218 ~~~~~~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        218 AHYSIIKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             cccCcCCCcceeeHHHHHHHHHHHhcC
Confidence                01124678999999999998864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.82  E-value=5.8e-18  Score=146.49  Aligned_cols=240  Identities=16%  Similarity=0.130  Sum_probs=168.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH--HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA--AVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+||||+|.||.+|++.|+++|+.|..+.|+++..+.  ....++....+.+.+..|+++++++...++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            58899999999999999999999999999999999987444  244444445579999999999999999988       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-C----
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-W----  165 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-~----  165 (299)
                      +.|+|+|.|.........     .-.+.++..+.|+.+++++....-   .       -.+||++||.++.... +    
T Consensus        78 gcdgVfH~Asp~~~~~~~-----~e~~li~pav~Gt~nVL~ac~~~~---s-------VkrvV~TSS~aAv~~~~~~~~~  142 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFDLED-----PEKELIDPAVKGTKNVLEACKKTK---S-------VKRVVYTSSTAAVRYNGPNIGE  142 (327)
T ss_pred             CCCEEEEeCccCCCCCCC-----cHHhhhhHHHHHHHHHHHHHhccC---C-------cceEEEeccHHHhccCCcCCCC
Confidence            789999999865432111     123678999999999999887432   0       3689999999987643 1    


Q ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc--hHHhHHHHhcC
Q 022335          166 -----------------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP--DEINSKARDYM  226 (299)
Q Consensus       166 -----------------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~  226 (299)
                                       ....|+.||    .+++..|.++++++|+...+|+|+.|..|........  ....+......
T Consensus       143 ~~vvdE~~wsd~~~~~~~~~~Y~~sK----~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~  218 (327)
T KOG1502|consen  143 NSVVDEESWSDLDFCRCKKLWYALSK----TLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLA  218 (327)
T ss_pred             CcccccccCCcHHHHHhhHHHHHHHH----HHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhccc
Confidence                             013588888    5555566666556689999999999987766553322  11111111111


Q ss_pred             ---C--CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCchhHHHHHhHhhhhcc
Q 022335          227 ---P--LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKRS  287 (299)
Q Consensus       227 ---~--~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  287 (299)
                         +  ...+...+|||.+.+++.....  -.|+.|-......       .+...+.+.+.+++..
T Consensus       219 ~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~~-------~~ei~~~l~~~~P~~~  275 (327)
T KOG1502|consen  219 ETYPNFWLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVVS-------IKEIADILRELFPDYP  275 (327)
T ss_pred             ccCCCCceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCccc-------HHHHHHHHHHhCCCCC
Confidence               1  1235789999999999885543  3477766665544       3444555555444433

>PLN02214 cinnamoyl-CoA reductase

Probab=99.81  E-value=9.2e-18  Score=150.75  Aligned_cols=207  Identities=13%  Similarity=0.042  Sum_probs=147.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA-AVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..+++++++||||+|.||.+++++|+++|++|++++|+.+.... ...++.....++.++.+|+++.+++.++++     
T Consensus         6 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          6 ASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-----
Confidence            34678999999999999999999999999999999998654322 122332222468889999999999888776     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----  164 (299)
                        ++|+|||+|+...         +++.+.+++|+.++.++++++...    .       ..+||++||..+..+.    
T Consensus        81 --~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~-------v~r~V~~SS~~avyg~~~~~  138 (342)
T PLN02214         81 --GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----K-------VKRVVITSSIGAVYMDPNRD  138 (342)
T ss_pred             --cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----C-------CCEEEEeccceeeeccCCCC
Confidence              6899999998541         235678999999999999987642    2       3589999996543211    


Q ss_pred             C-----------------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch--HHhHHHHhc
Q 022335          165 W-----------------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD--EINSKARDY  225 (299)
Q Consensus       165 ~-----------------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~--~~~~~~~~~  225 (299)
                      +                 ....|+.||.+.+.+++.++.++    |+++.+++|+.+..+.........  .........
T Consensus       139 ~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~  214 (342)
T PLN02214        139 PEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK----GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGS  214 (342)
T ss_pred             CCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCC
Confidence            0                 12469999999999988876553    799999999999766433221110  111111111


Q ss_pred             C-----CCCCCCCHHHHHHHHHHHcCC
Q 022335          226 M-----PLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       226 ~-----~~~~~~~~~dva~~~~~l~s~  247 (299)
                      .     ..+.+...+|+|++++.++..
T Consensus       215 ~~~~~~~~~~~i~V~Dva~a~~~al~~  241 (342)
T PLN02214        215 AKTYANLTQAYVDVRDVALAHVLVYEA  241 (342)
T ss_pred             cccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence            1     112467899999999888753

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.80  E-value=1.5e-17  Score=149.26  Aligned_cols=208  Identities=13%  Similarity=0.088  Sum_probs=145.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVS--ALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~--~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++++|||||+|.||.+++++|+++|++|+++.|+.+.......  .+.. ..++.++.+|+++.+++.++++       
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh-------
Confidence            47899999999999999999999999999988887654332221  1111 1358899999999998887765       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS------  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~------  164 (299)
                      ++|+|||+|+...   ...  .+.+...+++|+.++.++++++.+..   +       .++||++||...+...      
T Consensus        80 ~~d~vih~A~~~~---~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~---~-------~~~~v~~SS~~~~g~~~~~~~~  144 (338)
T PLN00198         80 GCDLVFHVATPVN---FAS--EDPENDMIKPAIQGVHNVLKACAKAK---S-------VKRVILTSSAAAVSINKLSGTG  144 (338)
T ss_pred             cCCEEEEeCCCCc---cCC--CChHHHHHHHHHHHHHHHHHHHHhcC---C-------ccEEEEeecceeeeccCCCCCC
Confidence            6899999998531   111  12345678999999999999986531   1       3689999997654311      


Q ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch-HHhHHHHhc
Q 022335          165 ------------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDY  225 (299)
Q Consensus       165 ------------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~  225 (299)
                                        +....|+.||.+.+.+++.++.+    +|+++++++|+.+..+......... .........
T Consensus       145 ~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~  220 (338)
T PLN00198        145 LVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE----NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITG  220 (338)
T ss_pred             ceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh----cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcC
Confidence                              12446999999999998887754    3799999999999765422111110 000111110


Q ss_pred             ----------CC----CCCCCCHHHHHHHHHHHcCC
Q 022335          226 ----------MP----LYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       226 ----------~~----~~~~~~~~dva~~~~~l~s~  247 (299)
                                .+    ...+...+|++++++.++..
T Consensus       221 ~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        221 NEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             CccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence                      01    13578899999999888864

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.80  E-value=1.2e-17  Score=147.96  Aligned_cols=223  Identities=19%  Similarity=0.135  Sum_probs=151.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           16 VALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++||||+|+||.+++++|+++|  .+|++++|.... .....+.+.. ..++.++.+|+++++++.++++..     ++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            48999999999999999999987  678888764311 1111112211 236788999999999998888753     69


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---------  163 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---------  163 (299)
                      |+|||+|+....    +...+..+..+++|+.++.++++++...+.          +.++|++||...+.+         
T Consensus        75 d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----------~~~~i~~Ss~~v~g~~~~~~~~~e  140 (317)
T TIGR01181        75 DAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWH----------EFRFHHISTDEVYGDLEKGDAFTE  140 (317)
T ss_pred             CEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----------CceEEEeeccceeCCCCCCCCcCC
Confidence            999999986532    123345667899999999999887765432          247999998543221         


Q ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC---------CCC
Q 022335          164 ---SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL---------YKL  231 (299)
Q Consensus       164 ---~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~  231 (299)
                         ......|+.+|.+.+.+++.++.++    ++++.++.|+.+..+...................+.         ..+
T Consensus       141 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (317)
T TIGR01181       141 TTPLAPSSPYSASKAASDHLVRAYHRTY----GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDW  216 (317)
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEee
Confidence               1234579999999999999887664    689999999988655332211111222222222111         135


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       232 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ...+|+++++..++.+.   ..|+.+++.++..+
T Consensus       217 i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~~  247 (317)
T TIGR01181       217 LYVEDHCRAIYLVLEKG---RVGETYNIGGGNER  247 (317)
T ss_pred             EEHHHHHHHHHHHHcCC---CCCceEEeCCCCce
Confidence            67899999999888542   35677887666543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=1.6e-17  Score=147.91  Aligned_cols=209  Identities=15%  Similarity=0.097  Sum_probs=143.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH--hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR--SLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++++|||||+|.||.+++++|+++|++|++++|+............  ....++.++.+|+++++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            37899999999999999999999999999999988654332222111  112468899999999998877766       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc--ccC----
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY--TAS----  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~--~~~----  164 (299)
                      ++|+|||+|+.... ...    +.....+++|+.++.++++++....   .       ..+||++||....  .+.    
T Consensus        76 ~~d~Vih~A~~~~~-~~~----~~~~~~~~~nv~gt~~ll~a~~~~~---~-------~~~~v~~SS~~~~~y~~~~~~~  140 (322)
T PLN02662         76 GCEGVFHTASPFYH-DVT----DPQAELIDPAVKGTLNVLRSCAKVP---S-------VKRVVVTSSMAAVAYNGKPLTP  140 (322)
T ss_pred             CCCEEEEeCCcccC-CCC----ChHHHHHHHHHHHHHHHHHHHHhCC---C-------CCEEEEccCHHHhcCCCcCCCC
Confidence            68999999986431 111    1124678999999999999876431   1       3589999997531  110    


Q ss_pred             -----------CC-----chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhc--
Q 022335          165 -----------WY-----QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDY--  225 (299)
Q Consensus       165 -----------~~-----~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~--  225 (299)
                                 +.     ...|+.+|.+.+.+++.+..+    +|++++.++|+.+.++....... ...........  
T Consensus       141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~  216 (322)
T PLN02662        141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE----NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ  216 (322)
T ss_pred             CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH----cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc
Confidence                       10     136999999888888776644    37999999999997664322111 11111111111  


Q ss_pred             -C--CCCCCCCHHHHHHHHHHHcCC
Q 022335          226 -M--PLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       226 -~--~~~~~~~~~dva~~~~~l~s~  247 (299)
                       .  ....+...+|+|++++.++..
T Consensus       217 ~~~~~~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        217 TFPNASYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             cCCCCCcCeEEHHHHHHHHHHHhcC
Confidence             1  123468899999999988854

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=2.5e-17  Score=148.10  Aligned_cols=226  Identities=18%  Similarity=0.120  Sum_probs=144.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-----LDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-----~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++.+.+.... .+.++.++.+|+++.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            589999999999999999999999999999987542     2222111111 1245889999999999999988864   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc------
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT------  162 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~------  162 (299)
                        ++|+|||+|+......    ..+.-...+++|+.++.++++++.+.-.+.        ..++|++||...+.      
T Consensus        78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--------~~~~v~~SS~~vyg~~~~~~  143 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK--------SVKFYQASTSELYGKVQEIP  143 (343)
T ss_pred             --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc--------CeeEEEeccHHhhCCCCCCC
Confidence              6899999999654321    112234567899999999999887641110        23799999964332      


Q ss_pred             -----cCCCchHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEeCCccCCCCCCCCCCchHHhHHH----------Hhc
Q 022335          163 -----ASWYQIHVAAAKAAVDAITRNLALEWGAD--YDIRVNGIAPGPIGDTPGMNKLAPDEINSKA----------RDY  225 (299)
Q Consensus       163 -----~~~~~~~Y~~sKaal~~l~~~la~e~~~~--~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~----------~~~  225 (299)
                           +......|+.||.+.+.+++.++.+++-+  .++.++...|+.-. . ...... .......          .+.
T Consensus       144 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~-~-~~~~~~-~~~~~~~~~~~~~~~~~g~g  220 (343)
T TIGR01472       144 QNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE-N-FVTRKI-TRAAAKIKLGLQEKLYLGNL  220 (343)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc-c-ccchHH-HHHHHHHHcCCCCceeeCCC
Confidence                 11235689999999999999998776300  01222333343110 0 000000 1111111          111


Q ss_pred             CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          226 MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       226 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      ...+.+...+|++++++.++...    .+..+++.+|..
T Consensus       221 ~~~rd~i~V~D~a~a~~~~~~~~----~~~~yni~~g~~  255 (343)
T TIGR01472       221 DAKRDWGHAKDYVEAMWLMLQQD----KPDDYVIATGET  255 (343)
T ss_pred             ccccCceeHHHHHHHHHHHHhcC----CCccEEecCCCc
Confidence            22345688999999998887532    134677776654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02240 UDP-glucose 4-epimerase

Probab=99.79  E-value=5.4e-17  Score=146.26  Aligned_cols=231  Identities=17%  Similarity=0.114  Sum_probs=151.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH----hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR----SLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      |++++++||||+|+||.+++++|+++|++|++++|...........+.    ....++.++.+|+++++++.++++..  
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--   80 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--   80 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC--
Confidence            458899999999999999999999999999999875432222111221    12346888999999999998887753  


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----  162 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----  162 (299)
                         ++|+|||+|+.....    .+.+++.+.+++|+.++.++++++    .+.+       ..++|++||...+.     
T Consensus        81 ---~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-------~~~~v~~Ss~~vyg~~~~~  142 (352)
T PLN02240         81 ---RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHG-------CKKLVFSSSATVYGQPEEV  142 (352)
T ss_pred             ---CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcC-------CCEEEEEccHHHhCCCCCC
Confidence               799999999965321    123456778999999999998754    3322       35899999964331     


Q ss_pred             ------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC-------CCCCch--HHhHHHH-hc-
Q 022335          163 ------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM-------NKLAPD--EINSKAR-DY-  225 (299)
Q Consensus       163 ------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~-------~~~~~~--~~~~~~~-~~-  225 (299)
                            +......|+.+|.+.+.+++.++.+.   .++.+..+.++.+..+...       ......  ....... .. 
T Consensus       143 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  219 (352)
T PLN02240        143 PCTEEFPLSATNPYGRTKLFIEEICRDIHASD---PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRR  219 (352)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCC
Confidence                  11235689999999999998887542   3677777777554322100       000000  1111111 11 


Q ss_pred             ---------------CCCCCCCCHHHHHHHHHHHcCCC--CCCccCcEEEeCCcccc
Q 022335          226 ---------------MPLYKLGEKWDIAMAALYLTSDT--GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       226 ---------------~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgg~~~  265 (299)
                                     ...+.+...+|+|++++.++...  .....|+.+++.++..+
T Consensus       220 ~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~  276 (352)
T PLN02240        220 PELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGT  276 (352)
T ss_pred             CceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcE
Confidence                           11123467899999887766321  12244678888777654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.78  E-value=8.1e-17  Score=145.00  Aligned_cols=230  Identities=14%  Similarity=0.035  Sum_probs=155.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh----c-CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS----L-GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~----~-~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      ..|+++++|||||+|.||.+++++|.++|++|++++|...........+..    . ..++.++.+|+++.+++.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            457889999999999999999999999999999999865432222222211    1 1358889999999988877765 


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                            ++|+|||.|+......    ..++....+++|+.++.++++++..    ..       -.++|++||...+...
T Consensus        90 ------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~-------~~~~v~~SS~~vyg~~  148 (348)
T PRK15181         90 ------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AH-------VSSFTYAASSSTYGDH  148 (348)
T ss_pred             ------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cC-------CCeEEEeechHhhCCC
Confidence                  5899999998643211    1122345789999999999887743    22       3589999987543211


Q ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHHhcCC--
Q 022335          165 -----------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYMP--  227 (299)
Q Consensus       165 -----------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~--  227 (299)
                                 .....|+.+|.+.+.+++.++.+    +|+++..+.|+.+..+.....    ..-...........+  
T Consensus       149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~  224 (348)
T PRK15181        149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARS----YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIY  224 (348)
T ss_pred             CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH----hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcE
Confidence                       12357999999999988876654    379999999998876533211    011222222221111  


Q ss_pred             -------CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 -------LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 -------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                             .+.+...+|+|++++..+........|..+++.+|...
T Consensus       225 ~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~  269 (348)
T PRK15181        225 INGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRT  269 (348)
T ss_pred             EeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence                   12457799999998876643222236788998877553

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.77  E-value=8.8e-17  Score=144.97  Aligned_cols=230  Identities=16%  Similarity=0.099  Sum_probs=151.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++|||||+|+||.+++++|+++|++ |+.+++..  ...+... .+. .+.++.++.+|+++.+++++++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5999999999999999999999987 44455532  1112211 111 1345788999999999999988752     79


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---------  163 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---------  163 (299)
                      |+|||+|+.....    ......++.+++|+.++.++++++.++|.......  ....++|++||...+..         
T Consensus        75 d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~--~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (352)
T PRK10084         75 DAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDK--KNAFRFHHISTDEVYGDLPHPDEVEN  148 (352)
T ss_pred             CEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhcccccccc--ccceeEEEecchhhcCCCCccccccc
Confidence            9999999965321    11223466899999999999999988765321100  00247999999643221         


Q ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc--CC--
Q 022335          164 ------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY--MP--  227 (299)
Q Consensus       164 ------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~--~~--  227 (299)
                                  ......|+.||.+.+.+++.++.++    |+++..+.|+.+..+..................  .+  
T Consensus       149 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PRK10084        149 SEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (352)
T ss_pred             cccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEe
Confidence                        1234689999999999999988765    577777888877655321111011111111111  11  


Q ss_pred             -----CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 -----LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 -----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                           ...+...+|++.++..++...   ..|..+++.++...
T Consensus       225 ~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        225 GKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence                 123678999999998877532   24777888776543

>PLN02686 cinnamoyl-CoA reductase

Probab=99.76  E-value=3e-16  Score=142.16  Aligned_cols=211  Identities=11%  Similarity=0.078  Sum_probs=143.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL------GIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      ....++|++|||||+|+||.+++++|+++|++|+++.|+.+..+.+. ++...      ..++.++.+|+++.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            34577999999999999999999999999999999888876555442 22211      125788999999999998887


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-c
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-Y  161 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-~  161 (299)
                      +       ++|.++|.++..........    .....++|+.++.++++++...   .+       -.++|++||..+ .
T Consensus       127 ~-------~~d~V~hlA~~~~~~~~~~~----~~~~~~~nv~gt~~llea~~~~---~~-------v~r~V~~SS~~~~v  185 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAGLSGY----TKSMAELEAKASENVIEACVRT---ES-------VRKCVFTSSLLACV  185 (367)
T ss_pred             H-------hccEEEecCeeecccccccc----cchhhhhhHHHHHHHHHHHHhc---CC-------ccEEEEeccHHHhc
Confidence            6       46899999886543221111    1234567888888888876532   11       247999999631 1


Q ss_pred             ------cc----------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHh
Q 022335          162 ------TA----------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEIN  219 (299)
Q Consensus       162 ------~~----------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~  219 (299)
                            ..                ......|+.||.+.+.+++.++.+    +|+++++++|+.+.++...... .....
T Consensus       186 yg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~gl~~v~lRp~~vyGp~~~~~~-~~~~~  260 (367)
T PLN02686        186 WRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG----KGLKLATICPALVTGPGFFRRN-STATI  260 (367)
T ss_pred             ccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh----cCceEEEEcCCceECCCCCCCC-ChhHH
Confidence                  00                001246999999999999877654    4799999999999776432211 11111


Q ss_pred             HHHHhcCC-----CCCCCCHHHHHHHHHHHcC
Q 022335          220 SKARDYMP-----LYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       220 ~~~~~~~~-----~~~~~~~~dva~~~~~l~s  246 (299)
                      .......+     ...+...+|++++++.++.
T Consensus       261 ~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        261 AYLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             HHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            11111111     1136789999999988775

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.76  E-value=2.4e-16  Score=141.30  Aligned_cols=227  Identities=15%  Similarity=0.112  Sum_probs=147.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++|||||+|+||.+++++|+++|++|++++|...........+... +.++.++.+|+++.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            5999999999999999999999999999886533222222223222 34577889999999998887763     37999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----------  164 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  164 (299)
                      |||+|+......    ..+...+.+++|+.++.++++++    ++.+       .++||++||...+...          
T Consensus        77 vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-------~~~~v~~Ss~~~yg~~~~~~~~E~~~  141 (338)
T PRK10675         77 VIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAAN-------VKNLIFSSSATVYGDQPKIPYVESFP  141 (338)
T ss_pred             EEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcC-------CCEEEEeccHHhhCCCCCCccccccC
Confidence            999998653221    12234567899999999987754    3332       3689999997543211          


Q ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC-------CCCCch---HHhHHHHhc-------
Q 022335          165 --WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM-------NKLAPD---EINSKARDY-------  225 (299)
Q Consensus       165 --~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~-------~~~~~~---~~~~~~~~~-------  225 (299)
                        .....|+.+|.+.+.+++.++.+..   ++++..+.++.+..+.-.       ......   .........       
T Consensus       142 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (338)
T PRK10675        142 TGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF  218 (338)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEe
Confidence              2357899999999999999876542   577777776555432100       000000   111111111       


Q ss_pred             ---------CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          226 ---------MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       226 ---------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                               .....+...+|+|++++.++........|+.+++.++..+
T Consensus       219 ~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~  267 (338)
T PRK10675        219 GNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGS  267 (338)
T ss_pred             CCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCce
Confidence                     0112467899999998877743212233578888776544

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.76  E-value=2e-16  Score=136.03  Aligned_cols=203  Identities=14%  Similarity=0.081  Sum_probs=132.9

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ-EHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~~~~   87 (299)
                      .....+++++||||+|+||++++++|+++|++|+++.|+.++.+....    .+.++.++.+|+++. +++.+       
T Consensus        12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~~-------   80 (251)
T PLN00141         12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLVE-------   80 (251)
T ss_pred             cccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHHH-------
Confidence            345668899999999999999999999999999999999876443221    134688999999983 33222       


Q ss_pred             Hc-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---c
Q 022335           88 HF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---A  163 (299)
Q Consensus        88 ~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---~  163 (299)
                      .+ .++|+||+++|......  .      ...+++|+.++.++++++.    +.+       .++||++||.....   +
T Consensus        81 ~~~~~~d~vi~~~g~~~~~~--~------~~~~~~n~~~~~~ll~a~~----~~~-------~~~iV~iSS~~v~g~~~~  141 (251)
T PLN00141         81 AIGDDSDAVICATGFRRSFD--P------FAPWKVDNFGTVNLVEACR----KAG-------VTRFILVSSILVNGAAMG  141 (251)
T ss_pred             HhhcCCCEEEECCCCCcCCC--C------CCceeeehHHHHHHHHHHH----HcC-------CCEEEEEccccccCCCcc
Confidence            22 37999999998642211  1      1124678888888877763    333       47899999986432   2


Q ss_pred             CCCchHHHHHHHHHHHHH-HHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAIT-RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~-~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      .+....|...|.+...+. +..+.++-+..|+++++|+||++.+++........      ..........+++|+|+.+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~------~~~~~~~~~i~~~dvA~~~~  215 (251)
T PLN00141        142 QILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVME------PEDTLYEGSISRDQVAEVAV  215 (251)
T ss_pred             cccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEEC------CCCccccCcccHHHHHHHHH
Confidence            233455766665544433 33333321267999999999999654322111000      00011123579999999999


Q ss_pred             HHcCC
Q 022335          243 YLTSD  247 (299)
Q Consensus       243 ~l~s~  247 (299)
                      .++..
T Consensus       216 ~~~~~  220 (251)
T PLN00141        216 EALLC  220 (251)
T ss_pred             HHhcC
Confidence            99854

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.74  E-value=5e-16  Score=138.20  Aligned_cols=226  Identities=16%  Similarity=0.068  Sum_probs=149.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|+||.+++++|.++|++|+++++...........+... .++.++.+|+++.++++++++.     +++|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            3799999999999999999999999998876433222222222221 2577889999999999888773     479999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----------  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  164 (299)
                      ||+||......    ..++..+.+..|+.++..+++++.    +.+       ..++|++||...+...           
T Consensus        75 v~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-------~~~~v~~ss~~~~g~~~~~~~~e~~~~  139 (328)
T TIGR01179        75 IHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQ----QTG-------VKKFIFSSSAAVYGEPSSIPISEDSPL  139 (328)
T ss_pred             EECccccCcch----hhcCchhhhhhhHHHHHHHHHHHH----hcC-------CCEEEEecchhhcCCCCCCCccccCCC
Confidence            99999653321    223345678899999999987653    222       3689999986543211           


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-----CCchHHh----HHHH-hc---------
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-----LAPDEIN----SKAR-DY---------  225 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-----~~~~~~~----~~~~-~~---------  225 (299)
                      .....|+.+|++.+.+++.++.+.   .++++.++.|+.+..+.....     .......    .... ..         
T Consensus       140 ~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (328)
T TIGR01179       140 GPINPYGRSKLMSERILRDLSKAD---PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTD  216 (328)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHhc---cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCc
Confidence            134679999999999999987653   379999999988765421110     0111111    1111 00         


Q ss_pred             CCC------CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          226 MPL------YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       226 ~~~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+.      ..+...+|+++++..++........|+.+++.++..+
T Consensus       217 ~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       217 YPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             ccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence            011      2357789999999888753222234677777665543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.74  E-value=9e-16  Score=138.58  Aligned_cols=218  Identities=18%  Similarity=0.150  Sum_probs=145.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHH---HHHHHHHHhcC--------CcEEEEEcCCCCHH------
Q 022335           16 VALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVL---DAAVSALRSLG--------IKAVGFEGDVRRQE------   76 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~---~~~~~~~~~~~--------~~v~~~~~Dl~~~~------   76 (299)
                      +++||||+|+||.+++++|+++|  ++|+++.|+.+..   +.+.+.+....        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  6799999976532   23333332211        46899999998652      


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEec
Q 022335           77 HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS  156 (299)
Q Consensus        77 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vs  156 (299)
                      ....+.       .++|++||||+.....       ..++..+++|+.++..+++.+..    ..       ..++|++|
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~~-------~~~~v~iS  135 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----GR-------AKPLHYVS  135 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----CC-------CceEEEEc
Confidence            333222       3799999999864321       22456778999999988877653    22       34599999


Q ss_pred             cccccccC----------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhH
Q 022335          157 ATLHYTAS----------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS  220 (299)
Q Consensus       157 S~~~~~~~----------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~  220 (299)
                      |.......                .....|+.+|.+.+.+++.++     ..|+++++++||.+.++.............
T Consensus       136 S~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~  210 (367)
T TIGR01746       136 TISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS-----DRGLPVTIVRPGRILGNSYTGAINSSDILW  210 (367)
T ss_pred             cccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH-----hcCCCEEEECCCceeecCCCCCCCchhHHH
Confidence            98765431                113469999999998886543     338999999999997542222221222111


Q ss_pred             HH------HhcCCC-----CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          221 KA------RDYMPL-----YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       221 ~~------~~~~~~-----~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ..      ....|.     ..+.+.+|++++++.++........|+.+++.++.
T Consensus       211 ~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~  264 (367)
T TIGR01746       211 RMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPE  264 (367)
T ss_pred             HHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCC
Confidence            11      111121     22678899999999988655433458888888754

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.74  E-value=4e-16  Score=139.03  Aligned_cols=209  Identities=19%  Similarity=0.165  Sum_probs=146.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++++||||+|+||+++++.|+++|++|++++|+.+....    +.  ...+.++.+|+++.+++.++++       ++|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE--GLDVEIVEGDLRDPASLRKAVA-------GCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc--cCCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            369999999999999999999999999999998754322    11  2257889999999999888776       6899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC---------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW---------  165 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  165 (299)
                      |||+++....      ..++++..+++|+.++.++++++..    ..       .+++|++||...+.+.+         
T Consensus        68 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~~v~~SS~~~~~~~~~~~~~~e~~  130 (328)
T TIGR03466        68 LFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AG-------VERVVYTSSVATLGVRGDGTPADETT  130 (328)
T ss_pred             EEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hC-------CCeEEEEechhhcCcCCCCCCcCccC
Confidence            9999985321      1123567889999999999888653    22       36899999976543211         


Q ss_pred             ------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHH-hHHHHhcCC-----CCCCCC
Q 022335          166 ------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI-NSKARDYMP-----LYKLGE  233 (299)
Q Consensus       166 ------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~  233 (299)
                            ....|+.+|.+.+.+++.++.+    +|+++..++|+.+..+........... ........+     ...+..
T Consensus       131 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  206 (328)
T TIGR03466       131 PSSLDDMIGHYKRSKFLAEQAALEMAAE----KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVH  206 (328)
T ss_pred             CCCcccccChHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEE
Confidence                  1347999999999999887654    379999999998865432211111111 111111111     123567


Q ss_pred             HHHHHHHHHHHcCCCCCCccCcEEEeC
Q 022335          234 KWDIAMAALYLTSDTGKYVNGTTLIVD  260 (299)
Q Consensus       234 ~~dva~~~~~l~s~~~~~~~G~~i~~d  260 (299)
                      .+|+|+++...+...   ..|+.+++.
T Consensus       207 v~D~a~a~~~~~~~~---~~~~~~~~~  230 (328)
T TIGR03466       207 VDDVAEGHLLALERG---RIGERYILG  230 (328)
T ss_pred             HHHHHHHHHHHHhCC---CCCceEEec
Confidence            999999988877542   357777774

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.73  E-value=2.2e-16  Score=144.17  Aligned_cols=225  Identities=10%  Similarity=0.040  Sum_probs=148.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..++.++||||||+|.||.+++++|+++ |++|++++|+.+..+.+..... ....++.++.+|+++.+.+.++++    
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence            3455678999999999999999999998 5899999987654433221110 112368999999999999887765    


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---  164 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---  164 (299)
                         ++|+|||+|+.........    +-.+.+..|+.++.++++++...            +.++|++||...+...   
T Consensus        86 ---~~d~ViHlAa~~~~~~~~~----~~~~~~~~n~~gt~~ll~aa~~~------------~~r~v~~SS~~vYg~~~~~  146 (386)
T PLN02427         86 ---MADLTINLAAICTPADYNT----RPLDTIYSNFIDALPVVKYCSEN------------NKRLIHFSTCEVYGKTIGS  146 (386)
T ss_pred             ---cCCEEEEcccccChhhhhh----ChHHHHHHHHHHHHHHHHHHHhc------------CCEEEEEeeeeeeCCCcCC
Confidence               5899999999654322111    11234567999999888776421            2479999996432110   


Q ss_pred             ------C------------------------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC--C
Q 022335          165 ------W------------------------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN--K  212 (299)
Q Consensus       165 ------~------------------------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~--~  212 (299)
                            +                        ....|+.||.+.+.+++.++.    .+|+++.+++|+.+..+....  .
T Consensus       147 ~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~g~~~~ilR~~~vyGp~~~~~~~  222 (386)
T PLN02427        147 FLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA----ENGLEFTIVRPFNWIGPRMDFIPG  222 (386)
T ss_pred             CCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh----hcCCceEEecccceeCCCCCcccc
Confidence                  0                        113699999999988876653    347999999999997654211  0


Q ss_pred             -----CCchHH----hHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          213 -----LAPDEI----NSKARDYMP---------LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       213 -----~~~~~~----~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                           ......    ........+         .+.+...+|+|++++.++... ....|..+++.++
T Consensus       223 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        223 IDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             ccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence                 000011    111211111         124688999999998887532 1235777888765

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.71  E-value=2.3e-15  Score=137.41  Aligned_cols=226  Identities=20%  Similarity=0.212  Sum_probs=176.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ..+.||++|||||+|.||..+++++++.+.+ ++++++++-+.-....+++..  ..++.++-+|++|.+.++++++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            3588999999999999999999999998766 889999999888888888775  467889999999999999998854 


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                          ++|+|+|.|+.-+ -|+-+..   ..+.+.+|+.|+.++++++...-           -.++|.+|+--+..|   
T Consensus       325 ----kvd~VfHAAA~KH-VPl~E~n---P~Eai~tNV~GT~nv~~aa~~~~-----------V~~~V~iSTDKAV~P---  382 (588)
T COG1086         325 ----KVDIVFHAAALKH-VPLVEYN---PEEAIKTNVLGTENVAEAAIKNG-----------VKKFVLISTDKAVNP---  382 (588)
T ss_pred             ----CCceEEEhhhhcc-CcchhcC---HHHHHHHhhHhHHHHHHHHHHhC-----------CCEEEEEecCcccCC---
Confidence                7999999998643 2344433   34678999999999999997542           357999999877766   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC--------CCCCCHHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL--------YKLGEKWDIA  238 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva  238 (299)
                      ...||+||...+.++.+++.... ..+-++.++.-|-|-..   +...-+-+.++..+.-|+        +-+.+.+|.+
T Consensus       383 tNvmGaTKr~aE~~~~a~~~~~~-~~~T~f~~VRFGNVlGS---rGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv  458 (588)
T COG1086         383 TNVMGATKRLAEKLFQAANRNVS-GTGTRFCVVRFGNVLGS---RGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAV  458 (588)
T ss_pred             chHhhHHHHHHHHHHHHHhhccC-CCCcEEEEEEecceecC---CCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHH
Confidence            46899999999999999988764 44789999999988543   222234445555555444        2346677888


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.++.-..   ..-.|+.+.+|-|..+
T Consensus       459 ~LVlqA~a---~~~gGeifvldMGepv  482 (588)
T COG1086         459 QLVLQAGA---IAKGGEIFVLDMGEPV  482 (588)
T ss_pred             HHHHHHHh---hcCCCcEEEEcCCCCe
Confidence            87766553   3468999999988765

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.70  E-value=1.7e-15  Score=127.68  Aligned_cols=225  Identities=19%  Similarity=0.133  Sum_probs=155.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCe--EEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGAS--VAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~--Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++|||||.|.||.++++.+.++...  |+.++.-.  ...+.+ ..+ ....++.|++.||.|.+.+.+++.+-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV-EDSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh-hcCCCceEEeccccCHHHHHHHHHhc-----
Confidence            46899999999999999999987553  56666421  112222 222 12357999999999999999998864     


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc---------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY---------  161 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~---------  161 (299)
                      .+|++||.|+-.+-    +.+..+-...+++|++|++.|++++..+..+          -+++.||.-.-+         
T Consensus        74 ~~D~VvhfAAESHV----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----------frf~HISTDEVYG~l~~~~~~  139 (340)
T COG1088          74 QPDAVVHFAAESHV----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----------FRFHHISTDEVYGDLGLDDDA  139 (340)
T ss_pred             CCCeEEEechhccc----cccccChhhhhhcchHHHHHHHHHHHHhccc----------ceEEEeccccccccccCCCCC
Confidence            79999999986553    3344445567899999999999999877542          257887763321         


Q ss_pred             ----ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHH--HhcC-------CC
Q 022335          162 ----TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--RDYM-------PL  228 (299)
Q Consensus       162 ----~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~--~~~~-------~~  228 (299)
                          .+......|++|||+.+.|+++..+.|    |+.+....+.--..|-......-+......  ....       ..
T Consensus       140 FtE~tp~~PsSPYSASKAasD~lVray~~TY----glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~i  215 (340)
T COG1088         140 FTETTPYNPSSPYSASKAASDLLVRAYVRTY----GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQI  215 (340)
T ss_pred             cccCCCCCCCCCcchhhhhHHHHHHHHHHHc----CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcce
Confidence                233456789999999999999999766    688888877544333222221111111111  1112       23


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +.+...+|=+.++..++...   .-|++.++.||....+
T Consensus       216 RDWl~VeDh~~ai~~Vl~kg---~~GE~YNIgg~~E~~N  251 (340)
T COG1088         216 RDWLYVEDHCRAIDLVLTKG---KIGETYNIGGGNERTN  251 (340)
T ss_pred             eeeEEeHhHHHHHHHHHhcC---cCCceEEeCCCccchH
Confidence            45778999999999888643   3499999999987643

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.70  E-value=1.4e-15  Score=132.58  Aligned_cols=236  Identities=18%  Similarity=0.137  Sum_probs=159.2

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           18 LITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        18 lItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      |||||+|.||.+++++|.++|  .+|.++++......  ...+... ....++.+|+++.+++.++++       ++|+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHhc-------CCceE
Confidence            699999999999999999999  78988888765322  1112121 223389999999999999887       78999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---C--------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---S--------  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---~--------  164 (299)
                      ||.|+......     ....+..+++|+.|+-+++++....    .       -.++|++||.....+   .        
T Consensus        71 ~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~-------VkrlVytSS~~vv~~~~~~~~~~~~dE  134 (280)
T PF01073_consen   71 FHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----G-------VKRLVYTSSISVVFDNYKGDPIINGDE  134 (280)
T ss_pred             EEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----C-------CCEEEEEcCcceeEeccCCCCcccCCc
Confidence            99998654322     2345678999999999999888642    2       468999999887554   1        


Q ss_pred             ------CCchHHHHHHHHHHHHHHHHHH-HhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc---------CCC
Q 022335          165 ------WYQIHVAAAKAAVDAITRNLAL-EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY---------MPL  228 (299)
Q Consensus       165 ------~~~~~Y~~sKaal~~l~~~la~-e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~---------~~~  228 (299)
                            .....|+.||+..+.++..... ++.....+++.+|+|..|..+... .+.+. ..+.....         ...
T Consensus       135 ~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~-~~~~~-~~~~~~~g~~~~~~g~~~~~  212 (280)
T PF01073_consen  135 DTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ-RLVPR-LVKMVRSGLFLFQIGDGNNL  212 (280)
T ss_pred             CCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc-cccch-hhHHHHhcccceeecCCCce
Confidence                  1234799999999988876554 221123599999999999765322 22111 11111111         111


Q ss_pred             CCCCCHHHHHHHHHHHcC---CC--CCCccCcEEEeCCccccCCCCCCchhHHHHHhHhhhh
Q 022335          229 YKLGEKWDIAMAALYLTS---DT--GKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEK  285 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s---~~--~~~~~G~~i~~dgg~~~~~~~~~~~~~~~~~~~~~~~  285 (299)
                      ..+...+++|.+++.-..   +.  .....|+.+.+..+...    .-...++..+|+....
T Consensus       213 ~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~----~~~~~f~~~~~~~~G~  270 (280)
T PF01073_consen  213 FDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV----PSFWDFMRPLWEALGY  270 (280)
T ss_pred             ECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCcc----CcHHHHHHHHHHHCCC
Confidence            235779999998765332   22  45689999998887544    2124456666666533

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.69  E-value=2.3e-15  Score=127.77  Aligned_cols=212  Identities=19%  Similarity=0.188  Sum_probs=151.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      ||||||+|.||.+++++|.++|+.|+.+.|+...........     ++.++.+|+++.+.++++++..     .+|.||
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence            799999999999999999999999888887765433222211     6999999999999999999876     899999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----------C
Q 022335           97 NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----------W  165 (299)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------~  165 (299)
                      |+|+....    ..+.+.....++.|+.+..++++++...    +       ..++|++||...+...           .
T Consensus        71 ~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-------~~~~i~~sS~~~y~~~~~~~~~e~~~~~  135 (236)
T PF01370_consen   71 HLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAAREA----G-------VKRFIFLSSASVYGDPDGEPIDEDSPIN  135 (236)
T ss_dssp             EEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHH----T-------TSEEEEEEEGGGGTSSSSSSBETTSGCC
T ss_pred             Eeeccccc----cccccccccccccccccccccccccccc----c-------cccccccccccccccccccccccccccc
Confidence            99986421    1122445677888888888887777643    2       3589999996543322           1


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCC---CCCCCCchHHhHHHHhcCC---------CCCCCC
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP---GMNKLAPDEINSKARDYMP---------LYKLGE  233 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~  233 (299)
                      ....|+.+|...+.+.+.+..+.    ++++.++.|+.+..+.   ..................+         ...+..
T Consensus       136 ~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  211 (236)
T PF01370_consen  136 PLSPYGASKRAAEELLRDYAKKY----GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIH  211 (236)
T ss_dssp             HSSHHHHHHHHHHHHHHHHHHHH----TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEE
T ss_pred             ccccccccccccccccccccccc----ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEE
Confidence            34569999999999999888765    6999999999887665   1111112233333332221         123577


Q ss_pred             HHHHHHHHHHHcCCCCCCccCcEEEe
Q 022335          234 KWDIAMAALYLTSDTGKYVNGTTLIV  259 (299)
Q Consensus       234 ~~dva~~~~~l~s~~~~~~~G~~i~~  259 (299)
                      .+|+|++++.++....  ..|+.+++
T Consensus       212 v~D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  212 VDDLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHHHHHHHhCCC--CCCCEEEe
Confidence            8999999999886544  56777765

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.69  E-value=1.4e-15  Score=147.79  Aligned_cols=225  Identities=12%  Similarity=0.055  Sum_probs=150.8

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH-AKKVVES   84 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-v~~~~~~   84 (299)
                      +.-+.+++++||||||+|.||.+++++|+++ |++|++++|+.......   .  ...++.++.+|+++.++ ++++++ 
T Consensus       308 ~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~--~~~~~~~~~gDl~d~~~~l~~~l~-  381 (660)
T PRK08125        308 PACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L--GHPRFHFVEGDISIHSEWIEYHIK-  381 (660)
T ss_pred             chhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c--CCCceEEEeccccCcHHHHHHHhc-
Confidence            3344577899999999999999999999986 79999999976432221   1  12358889999998665 344333 


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                            ++|+|||+|+........    +..+..+++|+.++.++++++...            +.++|++||...+...
T Consensus       382 ------~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~------------~~~~V~~SS~~vyg~~  439 (660)
T PRK08125        382 ------KCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY------------NKRIIFPSTSEVYGMC  439 (660)
T ss_pred             ------CCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc------------CCeEEEEcchhhcCCC
Confidence                  699999999975432211    123456889999999998887632            2479999996433210


Q ss_pred             ---------------C---CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCc----hHH
Q 022335          165 ---------------W---YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAP----DEI  218 (299)
Q Consensus       165 ---------------~---~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~----~~~  218 (299)
                                     +   ....|+.||.+.+.+++.++.++    |+++..+.|+.+..+.....    ...    ...
T Consensus       440 ~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~----g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~  515 (660)
T PRK08125        440 TDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE----GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQL  515 (660)
T ss_pred             CCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc----CCceEEEEEceeeCCCccccccccccccchHHHH
Confidence                           1   12369999999999998876543    69999999998875532110    000    111


Q ss_pred             hHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          219 NSKARDY---------MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       219 ~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      .......         ...+.+...+|++++++.++........|+.+++.+|.
T Consensus       516 i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        516 ILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             HHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            1111111         11234678999999998887543223467888877663

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.67  E-value=2.4e-14  Score=128.93  Aligned_cols=216  Identities=16%  Similarity=0.089  Sum_probs=143.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHHHHHHHcCCc
Q 022335           15 KVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR-RQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++|||||+|.||.+++++|.++ |++|++++|+......    +.. ...+.++.+|++ +.+.+.++++       ++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            46999999999999999999986 6999999987643222    111 235889999998 6666655544       68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC--------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS--------  164 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~--------  164 (299)
                      |+|||+|+...+...    .++-+..+++|+.++.++++++..    .        +.++|++||...+...        
T Consensus        70 d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~~----~--------~~~~v~~SS~~vyg~~~~~~~~ee  133 (347)
T PRK11908         70 DVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAVK----Y--------GKHLVFPSTSEVYGMCPDEEFDPE  133 (347)
T ss_pred             CEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHHh----c--------CCeEEEEecceeeccCCCcCcCcc
Confidence            999999986543211    122345678999999988877652    2        2479999997433210        


Q ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----Cc----hHHhHHHHhc-
Q 022335          165 ----------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----AP----DEINSKARDY-  225 (299)
Q Consensus       165 ----------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~----~~~~~~~~~~-  225 (299)
                                .....|+.+|.+.+.+.+.++.+    +|+++..+.|+.+..+......    ..    .......... 
T Consensus       134 ~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~  209 (347)
T PRK11908        134 ASPLVYGPINKPRWIYACSKQLMDRVIWAYGME----EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGE  209 (347)
T ss_pred             ccccccCcCCCccchHHHHHHHHHHHHHHHHHH----cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCC
Confidence                      11236999999999998887654    3688888999877654322110    00    1111111111 


Q ss_pred             --------CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          226 --------MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       226 --------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                              ...+.+...+|++++++.++........|+.+++.++
T Consensus       210 ~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        210 PISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             ceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence                    1223478999999999988864322245788888664

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.67  E-value=9.1e-16  Score=131.70  Aligned_cols=219  Identities=20%  Similarity=0.197  Sum_probs=151.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc--CCcEE----EEEcCCCCHHHHHHHHHHHHHHc
Q 022335           17 ALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL--GIKAV----GFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~v~----~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ||||||+|.||..++++|++.+. +++++++++..+-.+..+++..  +.++.    .+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999885 5999999999999998888543  22343    4588999999999988754    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                       ++|+|+|.|+.-+..-. +..   ..+.+++|+.|+.++++++...-           -.++|++|+--+..|   ...
T Consensus        77 -~pdiVfHaAA~KhVpl~-E~~---p~eav~tNv~GT~nv~~aa~~~~-----------v~~~v~ISTDKAv~P---tnv  137 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPLM-EDN---PFEAVKTNVLGTQNVAEAAIEHG-----------VERFVFISTDKAVNP---TNV  137 (293)
T ss_dssp             -T-SEEEE------HHHH-CCC---HHHHHHHHCHHHHHHHHHHHHTT------------SEEEEEEECGCSS-----SH
T ss_pred             -CCCEEEEChhcCCCChH-HhC---HHHHHHHHHHHHHHHHHHHHHcC-----------CCEEEEccccccCCC---CcH
Confidence             89999999986543222 222   34679999999999999998541           358999999877765   468


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC--------CCCCCHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL--------YKLGEKWDIAMAA  241 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~  241 (299)
                      |++||.-.+.++.+.+...+ ..+.++.+++-|.|-..   +...-+-+.++....-|+        +-+.+++|.++.+
T Consensus       138 mGatKrlaE~l~~~~~~~~~-~~~t~f~~VRFGNVlgS---~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lv  213 (293)
T PF02719_consen  138 MGATKRLAEKLVQAANQYSG-NSDTKFSSVRFGNVLGS---RGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLV  213 (293)
T ss_dssp             HHHHHHHHHHHHHHHCCTSS-SS--EEEEEEE-EETTG---TTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCC-CCCcEEEEEEecceecC---CCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHH
Confidence            99999999999988887764 56789999999988532   223345555666665555        2357888999987


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.-+...   ..|+.+.+|=|..+
T Consensus       214 l~a~~~~---~~geifvl~mg~~v  234 (293)
T PF02719_consen  214 LQAAALA---KGGEIFVLDMGEPV  234 (293)
T ss_dssp             HHHHHH-----TTEEEEE---TCE
T ss_pred             HHHHhhC---CCCcEEEecCCCCc
Confidence            7655322   46889999987765

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=4e-14  Score=129.20  Aligned_cols=212  Identities=19%  Similarity=0.117  Sum_probs=142.1

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH--HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA--AVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ....++++++||||+|.||++++++|+++|++|++++|+.+..+.  ...++.....++.++.+|++++++++++++.. 
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-  133 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-  133 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-
Confidence            345668899999999999999999999999999999998765321  11222222346889999999999999888743 


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                        .+++|+||||++.....     .    ...+++|+.+..++++++.    +.+       .++||++||.....+   
T Consensus       134 --~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa~----~~g-------v~r~V~iSS~~v~~p---  188 (390)
T PLN02657        134 --GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAGR----EVG-------AKHFVLLSAICVQKP---  188 (390)
T ss_pred             --CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHHH----HcC-------CCEEEEEeeccccCc---
Confidence              12699999998843211     1    1234678888777777653    332       468999999865433   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCC----------CCCCCCHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP----------LYKLGEKWD  236 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~d  236 (299)
                      ...|..+|...+...+.     . ..|++...++|+.+.....       ..........+          ...+...+|
T Consensus       189 ~~~~~~sK~~~E~~l~~-----~-~~gl~~tIlRp~~~~~~~~-------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~D  255 (390)
T PLN02657        189 LLEFQRAKLKFEAELQA-----L-DSDFTYSIVRPTAFFKSLG-------GQVEIVKDGGPYVMFGDGKLCACKPISEAD  255 (390)
T ss_pred             chHHHHHHHHHHHHHHh-----c-cCCCCEEEEccHHHhcccH-------HHHHhhccCCceEEecCCcccccCceeHHH
Confidence            44678889888776543     1 4589999999987743210       01111111111          112467889


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCC
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      +|..++.++.+..  ..|+.+++.|
T Consensus       256 lA~~i~~~~~~~~--~~~~~~~Igg  278 (390)
T PLN02657        256 LASFIADCVLDES--KINKVLPIGG  278 (390)
T ss_pred             HHHHHHHHHhCcc--ccCCEEEcCC
Confidence            9999888774322  3567788765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.64  E-value=3e-14  Score=138.90  Aligned_cols=226  Identities=12%  Similarity=0.037  Sum_probs=149.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKH--GASVAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .++++||||||+|.||++++++|.++  +++|+++++..  +..+.+...  ....++.++.+|+++.+.+.+++..   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh---
Confidence            45789999999999999999999998  67899888753  222221110  1134688999999999887766532   


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc----
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~----  163 (299)
                        .++|+|||+|+......    ...+..+.+++|+.++.++++++...   ..       ..++|++||...+..    
T Consensus        79 --~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~-------vkr~I~~SS~~vyg~~~~~  142 (668)
T PLN02260         79 --EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQ-------IRRFIHVSTDEVYGETDED  142 (668)
T ss_pred             --cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhc---CC-------CcEEEEEcchHHhCCCccc
Confidence              37999999999653221    11223467789999999998876432   11       258999999653321    


Q ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC-------
Q 022335          164 ----------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-------  226 (299)
Q Consensus       164 ----------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-------  226 (299)
                                ......|+.+|.+.+.+++.+..++    ++++.+++|+.+..+.......-..+........       
T Consensus       143 ~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~----~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~  218 (668)
T PLN02260        143 ADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGD  218 (668)
T ss_pred             cccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecC
Confidence                      1123579999999999998876554    6899999999887654322111111112211111       


Q ss_pred             --CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 --PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 --~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                        ....+...+|+|+++..++...   ..|..+++.++..+
T Consensus       219 g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        219 GSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             CCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence              1123577999999998887432   34677887766543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.64  E-value=3.3e-14  Score=125.83  Aligned_cols=213  Identities=14%  Similarity=0.091  Sum_probs=137.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--HcCCccE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE--HFGKLDI   94 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~--~~g~id~   94 (299)
                      +|||||+|.||++++++|+++|+.++++.|+.......          ..+..+|+.+..+.+.+++.+.+  .++++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            79999999999999999999999777665554321111          01234577776666666655543  3468999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----------  163 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  163 (299)
                      |||+|+......   .+.   +..++.|+.++.++++++..    .        +.++|++||...+..           
T Consensus        72 Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~----~--------~~~~i~~SS~~vyg~~~~~~~~E~~~  133 (308)
T PRK11150         72 IFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLE----R--------EIPFLYASSAATYGGRTDDFIEEREY  133 (308)
T ss_pred             EEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHH----c--------CCcEEEEcchHHhCcCCCCCCccCCC
Confidence            999998644321   111   34689999999999888743    2        246999999754321           


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--CCc--hHHhHHHHhc-C---------CCC
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--LAP--DEINSKARDY-M---------PLY  229 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--~~~--~~~~~~~~~~-~---------~~~  229 (299)
                      ......|+.+|.+.+.+++.+..+    .++++.++.|+.+..+.....  +..  ..+....... .         ..+
T Consensus       134 ~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r  209 (308)
T PRK11150        134 EKPLNVYGYSKFLFDEYVRQILPE----ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKR  209 (308)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH----cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceee
Confidence            112457999999999988877543    378999999988866532211  110  0111112111 1         112


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       230 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+...+|++++++.++...    .|..+++-+|...
T Consensus       210 ~~i~v~D~a~a~~~~~~~~----~~~~yni~~~~~~  241 (308)
T PRK11150        210 DFVYVGDVAAVNLWFWENG----VSGIFNCGTGRAE  241 (308)
T ss_pred             eeeeHHHHHHHHHHHHhcC----CCCeEEcCCCCce
Confidence            3578999999988877532    2457777666543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.63  E-value=6.9e-14  Score=126.93  Aligned_cols=217  Identities=17%  Similarity=0.065  Sum_probs=144.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++++|||||+|.||.++++.|.++|++|++++|.....      +......+.++.+|+++.+.+..++.       ++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   86 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMFCHEFHLVDLRVMENCLKVTK-------GV   86 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccccceEEECCCCCHHHHHHHHh-------CC
Confidence            478999999999999999999999999999999864311      11111125678899999888766654       68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----------  162 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----------  162 (299)
                      |+|||+|+..........   +....+..|+.++.++++++..    .+       ..++|++||...+.          
T Consensus        87 D~Vih~Aa~~~~~~~~~~---~~~~~~~~N~~~t~nll~aa~~----~~-------vk~~V~~SS~~vYg~~~~~~~~~~  152 (370)
T PLN02695         87 DHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAARI----NG-------VKRFFYASSACIYPEFKQLETNVS  152 (370)
T ss_pred             CEEEEcccccCCcccccc---CchhhHHHHHHHHHHHHHHHHH----hC-------CCEEEEeCchhhcCCccccCcCCC
Confidence            999999985432222111   1234567899999888887642    22       35899999964221          


Q ss_pred             -------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC----CCCchHHhHHHHh---cC--
Q 022335          163 -------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN----KLAPDEINSKARD---YM--  226 (299)
Q Consensus       163 -------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~----~~~~~~~~~~~~~---~~--  226 (299)
                             +......|+.+|.+.+.+++.++..+    |+++..+.|+.+..+....    ......+......   ..  
T Consensus       153 ~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~----g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~  228 (370)
T PLN02695        153 LKESDAWPAEPQDAYGLEKLATEELCKHYTKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEM  228 (370)
T ss_pred             cCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEE
Confidence                   22234589999999999998876543    7999999999887653211    1111222222221   11  


Q ss_pred             -----CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          227 -----PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       227 -----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                           ....+...+|++.+++.++...    .++.+++-++..
T Consensus       229 ~g~g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~  267 (370)
T PLN02695        229 WGDGKQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  267 (370)
T ss_pred             eCCCCeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCc
Confidence                 1123578999999998877532    245667766543

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.63  E-value=6e-14  Score=124.16  Aligned_cols=211  Identities=17%  Similarity=0.142  Sum_probs=146.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc-cEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL-DIL   95 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i-d~l   95 (299)
                      +|||||+|.||.+++++|.++|++|+.++|.........       ..+.++.+|+++.+.+.+.++       .. |.+
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~v   68 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDAV   68 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCEE
Confidence            999999999999999999999999999999775433221       357888999999966666555       33 999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----CC-----
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----WY-----  166 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----~~-----  166 (299)
                      ||+|+......... +  +....+++|+.++.++++++..    ..       ..+||+.||.....+.    +.     
T Consensus        69 ih~aa~~~~~~~~~-~--~~~~~~~~nv~gt~~ll~aa~~----~~-------~~~~v~~ss~~~~~~~~~~~~~~E~~~  134 (314)
T COG0451          69 IHLAAQSSVPDSNA-S--DPAEFLDVNVDGTLNLLEAARA----AG-------VKRFVFASSVSVVYGDPPPLPIDEDLG  134 (314)
T ss_pred             EEccccCchhhhhh-h--CHHHHHHHHHHHHHHHHHHHHH----cC-------CCeEEEeCCCceECCCCCCCCcccccC
Confidence            99999754321111 1  3456889999999999998875    22       4679997775543321    11     


Q ss_pred             ----chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC---chHHhHHHHhcCC---C-------C
Q 022335          167 ----QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---PDEINSKARDYMP---L-------Y  229 (299)
Q Consensus       167 ----~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~---~-------~  229 (299)
                          ...|+.+|.+.+.++...+..    .|+.+.++.|+.+..+.......   ............+   .       .
T Consensus       135 ~~~p~~~Yg~sK~~~E~~~~~~~~~----~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (314)
T COG0451         135 PPRPLNPYGVSKLAAEQLLRAYARL----YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTR  210 (314)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH----hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeE
Confidence                115999999999999888872    37999999998886655444321   1111222222222   1       1


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       230 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      .+...+|++.++..++......    .+++.++.
T Consensus       211 ~~i~v~D~a~~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         211 DFVYVDDVADALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             eeEeHHHHHHHHHHHHhCCCCc----EEEeCCCC
Confidence            2566899999999998654322    77777765

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.62  E-value=6e-14  Score=124.35  Aligned_cols=215  Identities=13%  Similarity=0.111  Sum_probs=140.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +|||||+|.||.++++.|.++|+ .|++++|..... .. .++   .  ...+..|+++.+.++.+.+.   .+.++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~---~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL---A--DLVIADYIDKEDFLDRLEKG---AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh---h--heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence            68999999999999999999998 688887654321 11 111   1  13466788887776665543   34689999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----------C
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----------S  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  164 (299)
                      ||+|+....      ..++.+..+++|+.++.++++++...            +.++|++||...+..           .
T Consensus        71 vh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~------------~~~~v~~SS~~vy~~~~~~~~e~~~~~  132 (314)
T TIGR02197        71 FHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAEK------------GIPFIYASSAATYGDGEAGFREGRELE  132 (314)
T ss_pred             EECccccCc------cccchHHHHHHHHHHHHHHHHHHHHh------------CCcEEEEccHHhcCCCCCCcccccCcC
Confidence            999996421      22345678899999999998887532            247999999654321           1


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--CCc--hHHhHHHHhcC--------------
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--LAP--DEINSKARDYM--------------  226 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--~~~--~~~~~~~~~~~--------------  226 (299)
                      .....|+.+|.+.+.+++......  ..++++..+.|+.+..+.....  +..  ...........              
T Consensus       133 ~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (314)
T TIGR02197       133 RPLNVYGYSKFLFDQYVRRRVLPE--ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDG  210 (314)
T ss_pred             CCCCHHHHHHHHHHHHHHHHhHhh--ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCC
Confidence            235679999999999987643332  2367888899988865542211  100  11111111110              


Q ss_pred             -CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 -PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                       ....+...+|+++++..++..    ..+..+++.++..+
T Consensus       211 ~~~~~~i~v~D~a~~i~~~~~~----~~~~~yni~~~~~~  246 (314)
T TIGR02197       211 EQLRDFVYVKDVVDVNLWLLEN----GVSGIFNLGTGRAR  246 (314)
T ss_pred             CceeeeEEHHHHHHHHHHHHhc----ccCceEEcCCCCCc
Confidence             112467899999999998864    24557777776543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.62  E-value=1.3e-13  Score=120.76  Aligned_cols=195  Identities=14%  Similarity=0.104  Sum_probs=132.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|.||.+++++|.++|++|++++|.                     .+|+.+.++++++++..     ++|++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v   54 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAV   54 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence            37999999999999999999999999999884                     47999999998887753     68999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----------C
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----------S  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  164 (299)
                      ||+++......    .....+..+++|+.++.++++++..    .        +.++|++||...+.+           .
T Consensus        55 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~--------~~~~v~~Ss~~vy~~~~~~~~~E~~~~  118 (287)
T TIGR01214        55 VNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAAR----H--------GARLVHISTDYVFDGEGKRPYREDDAT  118 (287)
T ss_pred             EECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHH----c--------CCeEEEEeeeeeecCCCCCCCCCCCCC
Confidence            99998653211    1223456789999999999888643    2        247999998643321           1


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCC-------CCCCCCHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP-------LYKLGEKWDI  237 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dv  237 (299)
                      .....|+.+|.+.+.+++.+        +.++.+++|+.+..+.....+ ............+       ...+...+|+
T Consensus       119 ~~~~~Y~~~K~~~E~~~~~~--------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  189 (287)
T TIGR01214       119 NPLNVYGQSKLAGEQAIRAA--------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDL  189 (287)
T ss_pred             CCcchhhHHHHHHHHHHHHh--------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHH
Confidence            13467999999888777643        357889999988655421111 1111221211111       1234568999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ++++..++....  ..|..+++-++.
T Consensus       190 a~a~~~~~~~~~--~~~~~~ni~~~~  213 (287)
T TIGR01214       190 ARVIAALLQRLA--RARGVYHLANSG  213 (287)
T ss_pred             HHHHHHHHhhcc--CCCCeEEEECCC
Confidence            999998885421  134555554433

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.60  E-value=1.7e-13  Score=126.82  Aligned_cols=214  Identities=14%  Similarity=0.045  Sum_probs=140.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHH-HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL-DAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++++||||||+|.||++++++|.++|++|+++++..... +.....+  ...++.++..|+.++.     +       .+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l-------~~  183 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L-------LE  183 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-------cC
Confidence            578999999999999999999999999999998753221 1111111  1245788889987652     1       25


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---------  162 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---------  162 (299)
                      +|+|||+|+....... .   .+..+.+++|+.++.++++++...            +.++|++||...+.         
T Consensus       184 ~D~ViHlAa~~~~~~~-~---~~p~~~~~~Nv~gt~nLleaa~~~------------g~r~V~~SS~~VYg~~~~~p~~E  247 (442)
T PLN02206        184 VDQIYHLACPASPVHY-K---FNPVKTIKTNVVGTLNMLGLAKRV------------GARFLLTSTSEVYGDPLQHPQVE  247 (442)
T ss_pred             CCEEEEeeeecchhhh-h---cCHHHHHHHHHHHHHHHHHHHHHh------------CCEEEEECChHHhCCCCCCCCCc
Confidence            8999999986543211 1   123567899999999998887532            24799999976432         


Q ss_pred             -------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--CCchHHhHHHHhcCC------
Q 022335          163 -------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMP------  227 (299)
Q Consensus       163 -------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~~------  227 (299)
                             +......|+.+|.+.+.++..+..++    |+++..+.|+.+..+.....  .....+........+      
T Consensus       248 ~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~----g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~  323 (442)
T PLN02206        248 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA----NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD  323 (442)
T ss_pred             cccccCCCCCccchHHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCC
Confidence                   11124579999999998888765543    68999999887765432111  001122222221111      


Q ss_pred             ---CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          228 ---LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       228 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                         .+.+...+|+|++++.++...    .+..+++.++..
T Consensus       324 G~~~rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~  359 (442)
T PLN02206        324 GKQTRSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPGE  359 (442)
T ss_pred             CCEEEeEEeHHHHHHHHHHHHhcC----CCceEEEcCCCc
Confidence               123678999999998877432    233677766554

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.57  E-value=5.4e-13  Score=123.22  Aligned_cols=215  Identities=12%  Similarity=0.006  Sum_probs=139.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.++||||||+|.||.+++++|.++|++|++++|...........+. ...++.++..|+.+..     +       .++
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~-------~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L-------LEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c-------cCC
Confidence            35789999999999999999999999999999985322111111111 1235778889987542     1       268


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----------  162 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----------  162 (299)
                      |+|||+|+........    .+-.+.+++|+.++.++++++...            +.++|++||...+.          
T Consensus       186 D~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~~------------g~r~V~~SS~~VYg~~~~~p~~E~  249 (436)
T PLN02166        186 DQIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV------------GARFLLTSTSEVYGDPLEHPQKET  249 (436)
T ss_pred             CEEEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHHHh------------CCEEEEECcHHHhCCCCCCCCCcc
Confidence            9999999865432211    123467899999999998777532            24799999975332          


Q ss_pred             ------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--CchHHhHHHHhcCC-------
Q 022335          163 ------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDYMP-------  227 (299)
Q Consensus       163 ------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~~-------  227 (299)
                            +......|+.+|.+.+.+++.+...+    ++++..+.|+.+..+......  .-..+........+       
T Consensus       250 ~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~----~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g  325 (436)
T PLN02166        250 YWGNVNPIGERSCYDEGKRTAETLAMDYHRGA----GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDG  325 (436)
T ss_pred             ccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCC
Confidence                  11123469999999999998776543    688999998888655321110  01112222222111       


Q ss_pred             --CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          228 --LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       228 --~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                        .+.+...+|+++++..++...    .+..+++-++..
T Consensus       326 ~~~rdfi~V~Dva~ai~~~~~~~----~~giyNIgs~~~  360 (436)
T PLN02166        326 KQTRSFQYVSDLVDGLVALMEGE----HVGPFNLGNPGE  360 (436)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcC----CCceEEeCCCCc
Confidence              123678999999998887422    234677765544

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.55  E-value=2.4e-12  Score=99.30  Aligned_cols=217  Identities=17%  Similarity=0.103  Sum_probs=161.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--CC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--GK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g~   91 (299)
                      -.+|+|.|+-+.+|.+++..|-++++-|.-++..+.+          ....-.++..|-+=.|+-+.+++++-+.+  .+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe----------~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gek   72 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE----------QADSSILVDGNKSWTEQEQSVLEQVGSSLQGEK   72 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc----------cccceEEecCCcchhHHHHHHHHHHHHhhcccc
Confidence            4579999999999999999999999999988875531          11112344556555666677777777766  37


Q ss_pred             ccEEEEcCCCCCCCCCCCCC-HHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           92 LDILVNAAAGNFLVSAEDLS-PNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      +|.++|.||.+..++...-+ ....+.++.-.+.......+....+++.         +|-+-..+.-.+..+.|++..|
T Consensus        73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---------GGLL~LtGAkaAl~gTPgMIGY  143 (236)
T KOG4022|consen   73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---------GGLLQLTGAKAALGGTPGMIGY  143 (236)
T ss_pred             cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---------CceeeecccccccCCCCcccch
Confidence            99999999977665443222 1223445555566666666666666553         5777777888888999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      +.+|+|+++|+++|+.+-. -+.|--+.+|.|-..+|++..++++..++.          .+.+.+.+++..+-...+.+
T Consensus       144 GMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs----------sWTPL~fi~e~flkWtt~~~  213 (236)
T KOG4022|consen  144 GMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS----------SWTPLSFISEHFLKWTTETS  213 (236)
T ss_pred             hHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc----------CcccHHHHHHHHHHHhccCC
Confidence            9999999999999998642 245788899999989888888888776553          36778899999888887777


Q ss_pred             CCccCcEEEe
Q 022335          250 KYVNGTTLIV  259 (299)
Q Consensus       250 ~~~~G~~i~~  259 (299)
                      +.-+|..+.+
T Consensus       214 RPssGsLlqi  223 (236)
T KOG4022|consen  214 RPSSGSLLQI  223 (236)
T ss_pred             CCCCCceEEE
Confidence            8888877764

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.54  E-value=4.6e-13  Score=118.20  Aligned_cols=202  Identities=15%  Similarity=0.069  Sum_probs=134.3

Q ss_pred             EEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEE
Q 022335           18 LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVN   97 (299)
Q Consensus        18 lItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~   97 (299)
                      |||||+|.||.++++.|.++|+.|+++.+.                    ..+|+++.++++++++..     ++|+|||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence            699999999999999999999998766432                    147999999988887753     6899999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--------------
Q 022335           98 AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--------------  163 (299)
Q Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--------------  163 (299)
                      +|+.......   ..++....+++|+.++.++++++...    +       -.++|++||...+.+              
T Consensus        56 ~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~----~-------~~~~i~~SS~~vyg~~~~~~~~E~~~~~~  121 (306)
T PLN02725         56 AAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYRH----G-------VKKLLFLGSSCIYPKFAPQPIPETALLTG  121 (306)
T ss_pred             eeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHHc----C-------CCeEEEeCceeecCCCCCCCCCHHHhccC
Confidence            9986421110   11122456888999999888887632    2       357999999653221              


Q ss_pred             -C-CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-C---CchHHhHHH----H----------
Q 022335          164 -S-WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-L---APDEINSKA----R----------  223 (299)
Q Consensus       164 -~-~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-~---~~~~~~~~~----~----------  223 (299)
                       . +....|+.+|.+.+.+.+.+..++    ++++.++.|+.+..+..... .   .-......+    .          
T Consensus       122 ~~~p~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (306)
T PLN02725        122 PPEPTNEWYAIAKIAGIKMCQAYRIQY----GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWG  197 (306)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcC
Confidence             1 112359999999998888776543    68999999998876532110 0   001111111    1          


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          224 DYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       224 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ...+...+...+|++++++.++...   ..+..+++.+|..+
T Consensus       198 ~g~~~~~~i~v~Dv~~~~~~~~~~~---~~~~~~ni~~~~~~  236 (306)
T PLN02725        198 SGSPLREFLHVDDLADAVVFLMRRY---SGAEHVNVGSGDEV  236 (306)
T ss_pred             CCCeeeccccHHHHHHHHHHHHhcc---ccCcceEeCCCCcc
Confidence            1122235788999999999988542   12344576655543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.53  E-value=3.9e-13  Score=113.99  Aligned_cols=157  Identities=23%  Similarity=0.192  Sum_probs=117.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +++|||||.|-||.+++.+|++.|++|+++|.....-.......     .+.++..|+.|.+-+++++++-     ++|.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~-----~ida   70 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEEN-----KIDA   70 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHhc-----CCCE
Confidence            36999999999999999999999999999997654322222211     1688999999999999998875     8999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----------c
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----------A  163 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----------~  163 (299)
                      |||.||...-.    .+.++-.+.++.|+.|+..|+++..    +.+       -.+|||-||.+-+.           +
T Consensus        71 ViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~----~~g-------v~~~vFSStAavYG~p~~~PI~E~~~  135 (329)
T COG1087          71 VVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAML----QTG-------VKKFIFSSTAAVYGEPTTSPISETSP  135 (329)
T ss_pred             EEECccccccc----hhhhCHHHHHhhchHhHHHHHHHHH----HhC-------CCEEEEecchhhcCCCCCcccCCCCC
Confidence            99999965432    2444556789999999999976654    433       35678766654321           2


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIA  200 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~  200 (299)
                      ......|+.||...+.+.+.++..+    +.+..+++
T Consensus       136 ~~p~NPYG~sKlm~E~iL~d~~~a~----~~~~v~LR  168 (329)
T COG1087         136 LAPINPYGRSKLMSEEILRDAAKAN----PFKVVILR  168 (329)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHhC----CCcEEEEE
Confidence            2345689999999999999888654    46666664

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.52  E-value=1.2e-12  Score=116.53  Aligned_cols=204  Identities=14%  Similarity=0.052  Sum_probs=131.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +++||||+|.||++++++|.++|++|++++|+.+....    +..  ..+.++.+|+++++++.+.++       ++|+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~V   68 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSFK-------GVTAI   68 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence            69999999999999999999999999999998754322    222  247889999999999877766       68999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA  175 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKa  175 (299)
                      ||+++....         +.....++|+.++.++++++..    .+       -.++|++||..... . +...|..+|.
T Consensus        69 i~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~~----~g-------vkr~I~~Ss~~~~~-~-~~~~~~~~K~  126 (317)
T CHL00194         69 IDASTSRPS---------DLYNAKQIDWDGKLALIEAAKA----AK-------IKRFIFFSILNAEQ-Y-PYIPLMKLKS  126 (317)
T ss_pred             EECCCCCCC---------CccchhhhhHHHHHHHHHHHHH----cC-------CCEEEEeccccccc-c-CCChHHHHHH
Confidence            998763211         1123456788888777766643    22       35899999864321 1 2345777887


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHH---HHhcCCCCCCCCHHHHHHHHHHHcCCCCCCc
Q 022335          176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK---ARDYMPLYKLGEKWDIAMAALYLTSDTGKYV  252 (299)
Q Consensus       176 al~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  252 (299)
                      ..+.+.+        ..|++...+.|+.+.... ............   .........+...+|+|+++..++....  .
T Consensus       127 ~~e~~l~--------~~~l~~tilRp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~  195 (317)
T CHL00194        127 DIEQKLK--------KSGIPYTIFRLAGFFQGL-ISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--T  195 (317)
T ss_pred             HHHHHHH--------HcCCCeEEEeecHHhhhh-hhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--c
Confidence            7655442        347888999998553211 000000000000   0000011234677999999988885432  3


Q ss_pred             cCcEEEeCCcccc
Q 022335          253 NGTTLIVDGGLWL  265 (299)
Q Consensus       253 ~G~~i~~dgg~~~  265 (299)
                      .|+.+++-|+..+
T Consensus       196 ~~~~~ni~g~~~~  208 (317)
T CHL00194        196 KNKTFPLVGPKSW  208 (317)
T ss_pred             cCcEEEecCCCcc
Confidence            5788888877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.51  E-value=9.1e-13  Score=107.62  Aligned_cols=172  Identities=16%  Similarity=0.131  Sum_probs=123.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      |+|+||+|.+|+.++++|.++|++|+++.|++++.+.        ..+++++.+|+.+++++.+.+.       +.|++|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence            6899999999999999999999999999999987655        5679999999999988888766       789999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC---------c
Q 022335           97 NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY---------Q  167 (299)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------~  167 (299)
                      +++|....         +            ...++.++..+++.+       -.++|++|+.......+.         .
T Consensus        66 ~~~~~~~~---------~------------~~~~~~~~~a~~~~~-------~~~~v~~s~~~~~~~~~~~~~~~~~~~~  117 (183)
T PF13460_consen   66 HAAGPPPK---------D------------VDAAKNIIEAAKKAG-------VKRVVYLSSAGVYRDPPGLFSDEDKPIF  117 (183)
T ss_dssp             ECCHSTTT---------H------------HHHHHHHHHHHHHTT-------SSEEEEEEETTGTTTCTSEEEGGTCGGG
T ss_pred             hhhhhhcc---------c------------ccccccccccccccc-------cccceeeeccccCCCCCcccccccccch
Confidence            99974332         1            345566677777765       568999999886654333         2


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      ..|...|...+.+.       . ..+++...++|+++.++.....    .....  .........+.+|+|..++.++
T Consensus       118 ~~~~~~~~~~e~~~-------~-~~~~~~~ivrp~~~~~~~~~~~----~~~~~--~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  118 PEYARDKREAEEAL-------R-ESGLNWTIVRPGWIYGNPSRSY----RLIKE--GGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             HHHHHHHHHHHHHH-------H-HSTSEEEEEEESEEEBTTSSSE----EEESS--TSTTSHCEEEHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHH-------H-hcCCCEEEEECcEeEeCCCcce----eEEec--cCCCCcCcCCHHHHHHHHHHHh
Confidence            35666665444333       1 3389999999999865542210    00000  1111124578899999998876

...

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.51  E-value=2.2e-12  Score=113.82  Aligned_cols=145  Identities=14%  Similarity=0.145  Sum_probs=105.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|.||.+++++|.++| +|+.++|...                 .+..|++|.+.++++++..     ++|+|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999 7888887531                 2457999999998887753     68999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----------C
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----------S  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----------~  164 (299)
                      ||+|+......    ..++-+..+.+|+.++.++++++...            +.++|++||...+.+           .
T Consensus        59 ih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~------------g~~~v~~Ss~~Vy~~~~~~p~~E~~~~  122 (299)
T PRK09987         59 VNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV------------GAWVVHYSTDYVFPGTGDIPWQETDAT  122 (299)
T ss_pred             EECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc------------CCeEEEEccceEECCCCCCCcCCCCCC
Confidence            99999654321    11222456789999999998877532            347999998543211           1


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                      .....|+.+|.+.+.+++..    . .   +...++|+++..+
T Consensus       123 ~P~~~Yg~sK~~~E~~~~~~----~-~---~~~ilR~~~vyGp  157 (299)
T PRK09987        123 APLNVYGETKLAGEKALQEH----C-A---KHLIFRTSWVYAG  157 (299)
T ss_pred             CCCCHHHHHHHHHHHHHHHh----C-C---CEEEEecceecCC
Confidence            23357999999998887543    2 2   2477778777644

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.49  E-value=4.1e-12  Score=123.87  Aligned_cols=218  Identities=15%  Similarity=0.118  Sum_probs=138.8

Q ss_pred             EEEEecCCChHHHHHHHHHH--HcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHH--HHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFG--KHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHA--KKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la--~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v--~~~~~~~~~~~g   90 (299)
                      ++|||||+|.||.+++++|.  ++|++|++++|+... ..........+ .++.++.+|+++++..  ...++.+    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            69999999999999999999  589999999996532 22222222222 4689999999985310  1111112    3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS------  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~------  164 (299)
                      ++|+|||+|+.....    .+   ......+|+.++.++++++.    +.+       ..++|++||.......      
T Consensus        77 ~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~----~~~-------~~~~v~~SS~~v~g~~~~~~~e  138 (657)
T PRK07201         77 DIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAE----RLQ-------AATFHHVSSIAVAGDYEGVFRE  138 (657)
T ss_pred             CCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHH----hcC-------CCeEEEEeccccccCccCcccc
Confidence            799999999964321    12   24567889999888877754    222       3679999987654211      


Q ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---Cch----HHhHHHHh---cCC
Q 022335          165 -------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---APD----EINSKARD---YMP  227 (299)
Q Consensus       165 -------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---~~~----~~~~~~~~---~~~  227 (299)
                             .....|+.+|...+.+.+.       ..|+++.++.|+.+..+......   ...    ........   ..+
T Consensus       139 ~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (657)
T PRK07201        139 DDFDEGQGLPTPYHRTKFEAEKLVRE-------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLP  211 (657)
T ss_pred             ccchhhcCCCCchHHHHHHHHHHHHH-------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccc
Confidence                   1234699999999888752       23799999999988654221111   000    01111100   011


Q ss_pred             -------CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 -------LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 -------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                             ...+...+|+++++..++..  ....|+.+++-++..+
T Consensus       212 ~~~~~~~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~  254 (657)
T PRK07201        212 MVGPDGGRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQ  254 (657)
T ss_pred             cccCCCCeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCC
Confidence                   11245688999999888753  3357888988776543

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.49  E-value=3.8e-12  Score=109.79  Aligned_cols=185  Identities=11%  Similarity=0.081  Sum_probs=151.1

Q ss_pred             CCEEEEecC-CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC--
Q 022335           14 GKVALITGG-GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG--   90 (299)
Q Consensus        14 ~k~vlItGa-s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g--   90 (299)
                      ..+|||.|. ...|++.+|..|-++|+-|+++..+.++.+....+-   ..++..+..|..++.++...+.++.+.+.  
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p   79 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP   79 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence            468899995 899999999999999999999999887655443332   34588888899888888888777776654  


Q ss_pred             ------------CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe-c
Q 022335           91 ------------KLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI-S  156 (299)
Q Consensus        91 ------------~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v-s  156 (299)
                                  .+..||....... .++++.++.+.|.+.++.|+..++.+++.++|+++.+...     +.+||.+ -
T Consensus        80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~-----~~~iil~~P  154 (299)
T PF08643_consen   80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQ-----KSKIILFNP  154 (299)
T ss_pred             CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----CceEEEEeC
Confidence                        4566777766555 4789999999999999999999999999999999983311     3555555 5


Q ss_pred             cccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          157 ATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       157 S~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                      |+.+....++...-.....++.+|+++|++|+. .++|.|..+..|.++-.
T Consensus       155 si~ssl~~PfhspE~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  155 SISSSLNPPFHSPESIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             chhhccCCCccCHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeeccc
Confidence            777777888999999999999999999999996 89999999999977533

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK05865 hypothetical protein; Provisional

Probab=99.46  E-value=2.4e-12  Score=125.98  Aligned_cols=180  Identities=15%  Similarity=0.104  Sum_probs=126.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +++||||+|.||.+++++|+++|++|++++|+....         ...++.++.+|+++.+++.++++       ++|+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~~~~v~~v~gDL~D~~~l~~al~-------~vD~V   65 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------WPSSADFIAADIRDATAVESAMT-------GADVV   65 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------cccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            699999999999999999999999999999975321         11257889999999999888776       58999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA  175 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKa  175 (299)
                      ||+|+....             .+++|+.++.++++++    ++.+       .++||++||..              |.
T Consensus        66 VHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~g-------vkr~V~iSS~~--------------K~  107 (854)
T PRK05865         66 AHCAWVRGR-------------NDHINIDGTANVLKAM----AETG-------TGRIVFTSSGH--------------QP  107 (854)
T ss_pred             EECCCcccc-------------hHHHHHHHHHHHHHHH----HHcC-------CCeEEEECCcH--------------HH
Confidence            999975321             3678999988776554    4433       46899999963              76


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh--cCCC------CCCCCHHHHHHHHHHHcCC
Q 022335          176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD--YMPL------YKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       176 al~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~dva~~~~~l~s~  247 (299)
                      +.+.+.+        .+|+++..+.|+.+..+..      .........  ..+.      ..+...+|++.++..++..
T Consensus       108 aaE~ll~--------~~gl~~vILRp~~VYGP~~------~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~  173 (854)
T PRK05865        108 RVEQMLA--------DCGLEWVAVRCALIFGRNV------DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLD  173 (854)
T ss_pred             HHHHHHH--------HcCCCEEEEEeceEeCCCh------HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhC
Confidence            6665442        2379999999998865421      111111111  1111      1357789999999888743


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      .  ...|..+++-++..+
T Consensus       174 ~--~~~ggvyNIgsg~~~  189 (854)
T PRK05865        174 T--VIDSGPVNLAAPGEL  189 (854)
T ss_pred             C--CcCCCeEEEECCCcc
Confidence            2  123556777766553

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.45  E-value=2e-12  Score=110.75  Aligned_cols=155  Identities=21%  Similarity=0.209  Sum_probs=117.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH---HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA---VSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~---~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++||||||.|-||.+++.+|.++|+.|+++|.-.......   .+++...+..+.++..|++|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            67899999999999999999999999999998643322222   2222223578999999999999999999976     


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc--------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT--------  162 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~--------  162 (299)
                      ++|.|+|.|+......    +.+.-...++.|+.|+++++.+.    ++.+       -..+|+.||..-+.        
T Consensus        77 ~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~-------~~~~V~sssatvYG~p~~ip~t  141 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHN-------VKALVFSSSATVYGLPTKVPIT  141 (343)
T ss_pred             CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcC-------CceEEEecceeeecCcceeecc
Confidence            7999999998654322    22333678899999999986654    4444       35789988866431        


Q ss_pred             ---cCC-CchHHHHHHHHHHHHHHHHHHHh
Q 022335          163 ---ASW-YQIHVAAAKAAVDAITRNLALEW  188 (299)
Q Consensus       163 ---~~~-~~~~Y~~sKaal~~l~~~la~e~  188 (299)
                         +.. ....|+.+|.+++.+.......+
T Consensus       142 e~~~t~~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  142 EEDPTDQPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             CcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence               222 56789999999999998887654

>PLN02996 fatty acyl-CoA reductase

Probab=99.43  E-value=2.5e-11  Score=113.78  Aligned_cols=222  Identities=15%  Similarity=0.138  Sum_probs=140.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEEeCChh---HHHHHHHHH---------Hh-c--------CCcEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQ---VLDAAVSAL---------RS-L--------GIKAV   66 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~---~Vv~~~r~~~---~~~~~~~~~---------~~-~--------~~~v~   66 (299)
                      .++||+++||||+|.||..++.+|++.+-   +|+++.|...   ..+.+..++         .+ .        ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            47899999999999999999999998643   4788888543   111221111         11 0        14789


Q ss_pred             EEEcCCCC-------HHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 022335           67 GFEGDVRR-------QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKK  139 (299)
Q Consensus        67 ~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~  139 (299)
                      ++..|++.       .+.++++++       ++|+|||+|+....   .    +..+..+++|+.|+.++++++...   
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~---  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKKC---  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            99999984       333445444       68999999986532   1    235678899999999998877532   


Q ss_pred             cCCCCCCCCCceEEEeccccccccCC------------------------------------------------------
Q 022335          140 GGPGRSSAGGGSILNISATLHYTASW------------------------------------------------------  165 (299)
Q Consensus       140 ~~~~~~~~~~g~iv~vsS~~~~~~~~------------------------------------------------------  165 (299)
                      ..       -.++|++||........                                                      
T Consensus       151 ~~-------~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (491)
T PLN02996        151 VK-------VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLG  223 (491)
T ss_pred             CC-------CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhc
Confidence            01       24789998865432100                                                      


Q ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---CCCc----hHHhHHHHh------
Q 022335          166 --------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---KLAP----DEINSKARD------  224 (299)
Q Consensus       166 --------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---~~~~----~~~~~~~~~------  224 (299)
                              ....|+.||+..+.+++.    +. . |+.+.+++|..|..+...+   +...    .........      
T Consensus       224 ~~~~~~~~~pn~Y~~TK~~aE~lv~~----~~-~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~  297 (491)
T PLN02996        224 MERAKLHGWPNTYVFTKAMGEMLLGN----FK-E-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCF  297 (491)
T ss_pred             hhHHHhCCCCCchHhhHHHHHHHHHH----hc-C-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEE
Confidence                    113499999999888854    32 3 7999999999886543211   1100    111111111      


Q ss_pred             ---cCCCCCCCCHHHHHHHHHHHcCCCC-CCccCcEEEeCCc
Q 022335          225 ---YMPLYKLGEKWDIAMAALYLTSDTG-KYVNGTTLIVDGG  262 (299)
Q Consensus       225 ---~~~~~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgg  262 (299)
                         ......+...+|++++++..+.... ..-.+.++++.+|
T Consensus       298 ~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        298 LADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             ecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence               1123456788999999877765321 1123567777665

>PLN02778 3,5-epimerase/4-reductase

Probab=99.38  E-value=1.2e-10  Score=102.57  Aligned_cols=193  Identities=16%  Similarity=0.138  Sum_probs=118.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+++|||||+|.||.++++.|.++|++|+...                        .|+++.+.+...++..     ++|
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~~-----~~D   59 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDAV-----KPT   59 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHhc-----CCC
Confidence            46899999999999999999999999987432                        2455555555555432     789


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc--c----------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH--Y----------  161 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~--~----------  161 (299)
                      +|||+||....... +...++-.+.+++|+.++.++++++...            +.+.+++||...  .          
T Consensus        60 ~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~------------gv~~v~~sS~~vy~~~~~~p~~~~~  126 (298)
T PLN02778         60 HVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRER------------GLVLTNYATGCIFEYDDAHPLGSGI  126 (298)
T ss_pred             EEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh------------CCCEEEEecceEeCCCCCCCcccCC
Confidence            99999997543211 1112234568899999999999888642            123455544221  1          


Q ss_pred             --c----cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEE-EeCCccCCCCCCCCCCchHHhHHHHhcCC---C-CC
Q 022335          162 --T----ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNG-IAPGPIGDTPGMNKLAPDEINSKARDYMP---L-YK  230 (299)
Q Consensus       162 --~----~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~-i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~-~~  230 (299)
                        .    +.+....|+.||.+.+.+++.++.    ..++|+.. +.++..        . ...+........+   . ..
T Consensus       127 ~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~----~~~lr~~~~~~~~~~--------~-~~~fi~~~~~~~~~~~~~~s  193 (298)
T PLN02778        127 GFKEEDTPNFTGSFYSKTKAMVEELLKNYEN----VCTLRVRMPISSDLS--------N-PRNFITKITRYEKVVNIPNS  193 (298)
T ss_pred             CCCcCCCCCCCCCchHHHHHHHHHHHHHhhc----cEEeeecccCCcccc--------c-HHHHHHHHHcCCCeeEcCCC
Confidence              0    111235799999999999877542    22455521 111100        0 1112233322221   1 23


Q ss_pred             CCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       231 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +...+|++++++.++...   ..| .+++.++..+
T Consensus       194 ~~yv~D~v~al~~~l~~~---~~g-~yNigs~~~i  224 (298)
T PLN02778        194 MTILDELLPISIEMAKRN---LTG-IYNFTNPGVV  224 (298)
T ss_pred             CEEHHHHHHHHHHHHhCC---CCC-eEEeCCCCcc
Confidence            667889999988887432   234 7887666544

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.37  E-value=8.3e-12  Score=109.32  Aligned_cols=198  Identities=15%  Similarity=0.084  Sum_probs=123.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++||||++|-||.++.+.|.++|+.|+.++|.                     .+|+++.+++.++++..     ++|+|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~V   55 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDVV   55 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCeE
Confidence            69999999999999999999999999999876                     67999999999999876     79999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----------  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  164 (299)
                      ||+|++....    .-..+-+..+.+|+.++..+.+++...            +.++|++||..-+.+.           
T Consensus        56 in~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~~~~------------~~~li~~STd~VFdG~~~~~y~E~d~~  119 (286)
T PF04321_consen   56 INCAAYTNVD----ACEKNPEEAYAINVDATKNLAEACKER------------GARLIHISTDYVFDGDKGGPYTEDDPP  119 (286)
T ss_dssp             EE------HH----HHHHSHHHHHHHHTHHHHHHHHHHHHC------------T-EEEEEEEGGGS-SSTSSSB-TTS--
T ss_pred             eccceeecHH----hhhhChhhhHHHhhHHHHHHHHHHHHc------------CCcEEEeeccEEEcCCcccccccCCCC
Confidence            9999865221    112234567899999999998888642            5789999997544332           


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC-------CCCCCCCHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-------PLYKLGEKWDI  237 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dv  237 (299)
                      .....|+-+|...+...+...     +   +..+++++++... ....+ ............       .....+..+|+
T Consensus       120 ~P~~~YG~~K~~~E~~v~~~~-----~---~~~IlR~~~~~g~-~~~~~-~~~~~~~~~~~~~i~~~~d~~~~p~~~~dl  189 (286)
T PF04321_consen  120 NPLNVYGRSKLEGEQAVRAAC-----P---NALILRTSWVYGP-SGRNF-LRWLLRRLRQGEPIKLFDDQYRSPTYVDDL  189 (286)
T ss_dssp             --SSHHHHHHHHHHHHHHHH------S---SEEEEEE-SEESS-SSSSH-HHHHHHHHHCTSEEEEESSCEE--EEHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHhc-----C---CEEEEecceeccc-CCCch-hhhHHHHHhcCCeeEeeCCceeCCEEHHHH
Confidence            124689999998888776521     2   5677778877544 11111 112222222111       11235678899


Q ss_pred             HHHHHHHcCCCC-CCccCcEEEeCCcccc
Q 022335          238 AMAALYLTSDTG-KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       238 a~~~~~l~s~~~-~~~~G~~i~~dgg~~~  265 (299)
                      |..+..++.... ..-.+..+++.|...+
T Consensus       190 A~~i~~l~~~~~~~~~~~Giyh~~~~~~~  218 (286)
T PF04321_consen  190 ARVILELIEKNLSGASPWGIYHLSGPERV  218 (286)
T ss_dssp             HHHHHHHHHHHHH-GGG-EEEE---BS-E
T ss_pred             HHHHHHHHHhcccccccceeEEEecCccc
Confidence            999999985432 1123456666655443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.35  E-value=2.3e-11  Score=104.48  Aligned_cols=159  Identities=18%  Similarity=0.214  Sum_probs=98.9

Q ss_pred             EecCCChHHHHHHHHHHHcCC--eEEEEeCChhH---HHHHHHHHH----------hcCCcEEEEEcCCCCH------HH
Q 022335           19 ITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQV---LDAAVSALR----------SLGIKAVGFEGDVRRQ------EH   77 (299)
Q Consensus        19 ItGas~giG~aia~~la~~G~--~Vv~~~r~~~~---~~~~~~~~~----------~~~~~v~~~~~Dl~~~------~~   77 (299)
                      ||||+|.||.++..+|++++.  +|+++.|..+.   .+++.+.+.          ....+++++..|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  89999997633   333322221          1256899999999985      34


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .+.+.+       .+|+|||||+.....       ..+++..++|+.|+.++++.+..    ..       ..++++|||
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~-------~~~~~~~~~NV~gt~~ll~la~~----~~-------~~~~~~iST  135 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN-------APYSELRAVNVDGTRNLLRLAAQ----GK-------RKRFHYIST  135 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----SS----------EEEEEE
T ss_pred             hhcccc-------ccceeeecchhhhhc-------ccchhhhhhHHHHHHHHHHHHHh----cc-------CcceEEecc
Confidence            444444       589999999865332       12344678999999999888762    11       247999999


Q ss_pred             cccc--cc------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCC
Q 022335          158 TLHY--TA------------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGD  206 (299)
Q Consensus       158 ~~~~--~~------------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t  206 (299)
                      ....  ..                  ......|..||...+.+.+..+.+.    |+.+.+++||.+-.
T Consensus       136 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~----g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  136 AYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH----GLPVTIYRPGIIVG  200 (249)
T ss_dssp             GGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-------EEEEEE-EEE-
T ss_pred             ccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC----CceEEEEecCcccc
Confidence            3211  11                  1223579999999999999887654    69999999998854

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.34  E-value=1.1e-10  Score=99.92  Aligned_cols=179  Identities=19%  Similarity=0.171  Sum_probs=125.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      +||||++|-+|.++++.|. .+..|+.+++..                     +|+++.+.+.+++.+.     ++|+||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence            9999999999999999998 778899998854                     7999999999999987     899999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----------C
Q 022335           97 NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----------W  165 (299)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------~  165 (299)
                      |+|++......    +.+-+..+.+|..++.++.++....            +..+|++|+-.-+.+.           .
T Consensus        56 n~AAyt~vD~a----E~~~e~A~~vNa~~~~~lA~aa~~~------------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~  119 (281)
T COG1091          56 NAAAYTAVDKA----ESEPELAFAVNATGAENLARAAAEV------------GARLVHISTDYVFDGEKGGPYKETDTPN  119 (281)
T ss_pred             ECccccccccc----cCCHHHHHHhHHHHHHHHHHHHHHh------------CCeEEEeecceEecCCCCCCCCCCCCCC
Confidence            99997654322    2234578999999999999998754            6789999975443322           2


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc-------CCCCCCCCHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-------MPLYKLGEKWDIA  238 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~dva  238 (299)
                      ....|+.||.+-+..++...     +   +..+|...|+..... ..+ -....+.....       ...+..+..+|+|
T Consensus       120 P~nvYG~sKl~GE~~v~~~~-----~---~~~I~Rtswv~g~~g-~nF-v~tml~la~~~~~l~vv~Dq~gsPt~~~dlA  189 (281)
T COG1091         120 PLNVYGRSKLAGEEAVRAAG-----P---RHLILRTSWVYGEYG-NNF-VKTMLRLAKEGKELKVVDDQYGSPTYTEDLA  189 (281)
T ss_pred             ChhhhhHHHHHHHHHHHHhC-----C---CEEEEEeeeeecCCC-CCH-HHHHHHHhhcCCceEEECCeeeCCccHHHHH
Confidence            35789999988888776543     2   233344444433211 000 01111111111       1224467899999


Q ss_pred             HHHHHHcCCC
Q 022335          239 MAALYLTSDT  248 (299)
Q Consensus       239 ~~~~~l~s~~  248 (299)
                      .++..++...
T Consensus       190 ~~i~~ll~~~  199 (281)
T COG1091         190 DAILELLEKE  199 (281)
T ss_pred             HHHHHHHhcc
Confidence            9999988654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.30  E-value=8.6e-10  Score=116.12  Aligned_cols=220  Identities=14%  Similarity=0.108  Sum_probs=139.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC----CeEEEEeCChhHH---HHHHHHHHhc-------CCcEEEEEcCCCCH----
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG----ASVAIMGRRKQVL---DAAVSALRSL-------GIKAVGFEGDVRRQ----   75 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G----~~Vv~~~r~~~~~---~~~~~~~~~~-------~~~v~~~~~Dl~~~----   75 (299)
                      .++++|||++|.||.+++.+|++++    .+|+++.|+....   +.+.+.....       ..++.++.+|++++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999987    7788888875432   2222222211       13688999999854    


Q ss_pred             --HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 022335           76 --EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSIL  153 (299)
Q Consensus        76 --~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv  153 (299)
                        +...++.       .++|++||||+....    ..+   +......|+.|+.++++.+..    .+       ..+++
T Consensus      1051 ~~~~~~~l~-------~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~----~~-------~~~~v 1105 (1389)
T TIGR03443      1051 SDEKWSDLT-------NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAE----GK-------AKQFS 1105 (1389)
T ss_pred             CHHHHHHHH-------hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHh----CC-------CceEE
Confidence              3322222       379999999986531    112   333456799999999887642    22       35799


Q ss_pred             Eecccccccc-----------------C-----------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC
Q 022335          154 NISATLHYTA-----------------S-----------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG  205 (299)
Q Consensus       154 ~vsS~~~~~~-----------------~-----------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~  205 (299)
                      ++||...+..                 .           .....|+.||.+.+.+++..+     ..|+++.+++||.+.
T Consensus      1106 ~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-----~~g~~~~i~Rpg~v~ 1180 (1389)
T TIGR03443      1106 FVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-----KRGLRGCIVRPGYVT 1180 (1389)
T ss_pred             EEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-----hCCCCEEEECCCccc
Confidence            9999654311                 0           012359999999998887643     238999999999996


Q ss_pred             CCCCCCCCCchHHhHHHH------hcCC----CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          206 DTPGMNKLAPDEINSKAR------DYMP----LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       206 t~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      .+.........+......      ...|    ...+...++++++++.++........+..+++.++.
T Consensus      1181 G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1181 GDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             cCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            543222111222211111      1112    134677999999999887543222334566666553

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.28  E-value=1.4e-10  Score=108.15  Aligned_cols=162  Identities=19%  Similarity=0.238  Sum_probs=118.0

Q ss_pred             CCEEE----EecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVAL----ITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vl----ItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |..+|    |+||++|+|.+++..|...|+.|+.+.+...+.                   +              ....
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-------------------~--------------~~~~   80 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-------------------A--------------AGWG   80 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc-------------------c--------------cCcC
Confidence            44555    888899999999999999999999887654310                   0              0001


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      .+++.+|+-+...       .+.+++        .+.+.+++.+++.|..         .|+||+++|.....   ....
T Consensus        81 ~~~~~~~~d~~~~-------~~~~~l--------~~~~~~~~~~l~~l~~---------~griv~i~s~~~~~---~~~~  133 (450)
T PRK08261         81 DRFGALVFDATGI-------TDPADL--------KALYEFFHPVLRSLAP---------CGRVVVLGRPPEAA---ADPA  133 (450)
T ss_pred             CcccEEEEECCCC-------CCHHHH--------HHHHHHHHHHHHhccC---------CCEEEEEccccccC---CchH
Confidence            2455444432210       112222        2344667777777643         58999999987653   3456


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|+++.+++++++.|+  .+||+++.|.|++                            ..+++++.++.|++++..
T Consensus       134 ~~~akaal~gl~rsla~E~--~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~  183 (450)
T PRK08261        134 AAAAQRALEGFTRSLGKEL--RRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRS  183 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHh--hcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCcc
Confidence            9999999999999999999  4599999998874                            256689999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+.++++...
T Consensus       184 a~~~g~~i~~~~~~~~  199 (450)
T PRK08261        184 AYVSGQVVRVGAADAA  199 (450)
T ss_pred             CCccCcEEEecCCccc
Confidence            9999999999998753

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.26  E-value=8.2e-10  Score=89.49  Aligned_cols=84  Identities=23%  Similarity=0.282  Sum_probs=73.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +++||||+ |+|.++++.|+++|++|++++|+++..+.+...+.. ..++.++.+|+++++++.++++.+.+.++++|++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            69999998 777889999999999999999998877776665543 4578889999999999999999999999999999


Q ss_pred             EEcCCC
Q 022335           96 VNAAAG  101 (299)
Q Consensus        96 v~~ag~  101 (299)
                      |+....
T Consensus        80 v~~vh~   85 (177)
T PRK08309         80 VAWIHS   85 (177)
T ss_pred             EEeccc
Confidence            988764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.26  E-value=5e-10  Score=99.24  Aligned_cols=224  Identities=15%  Similarity=0.130  Sum_probs=143.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++.+++||||+|.+|++++.+|.+++  ..|.+++..+..-.-..++......++.++.+|+.+..++.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            47899999999999999999999998  678888877642111111111135679999999999999888777       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-------  163 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-------  163 (299)
                      +. .+||+|+...+    .....+-+..+.+|+.|+.++..+..    +.+       -.++|++||..-..+       
T Consensus        76 ~~-~Vvh~aa~~~~----~~~~~~~~~~~~vNV~gT~nvi~~c~----~~~-------v~~lIYtSs~~Vvf~g~~~~n~  139 (361)
T KOG1430|consen   76 GA-VVVHCAASPVP----DFVENDRDLAMRVNVNGTLNVIEACK----ELG-------VKRLIYTSSAYVVFGGEPIING  139 (361)
T ss_pred             Cc-eEEEeccccCc----cccccchhhheeecchhHHHHHHHHH----HhC-------CCEEEEecCceEEeCCeecccC
Confidence            56 77777764332    22222456788999999777766654    333       568999999765432       


Q ss_pred             -----CC--CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC--------CC
Q 022335          164 -----SW--YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM--------PL  228 (299)
Q Consensus       164 -----~~--~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--------~~  228 (299)
                           .|  ..-.|+.||+-.+.+++....    ..+....+++|-.|..+ ..+.+.+...........        ..
T Consensus       140 ~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~----~~~l~T~aLR~~~IYGp-gd~~~~~~i~~~~~~g~~~f~~g~~~~~  214 (361)
T KOG1430|consen  140 DESLPYPLKHIDPYGESKALAEKLVLEANG----SDDLYTCALRPPGIYGP-GDKRLLPKIVEALKNGGFLFKIGDGENL  214 (361)
T ss_pred             CCCCCCccccccccchHHHHHHHHHHHhcC----CCCeeEEEEccccccCC-CCccccHHHHHHHHccCceEEeeccccc
Confidence                 22  124899999888888776552    44789999999888644 333332221111111110        11


Q ss_pred             CCCCCHHHHHHHH----HHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAMAA----LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~~~----~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..+...+-|+.+.    ..|.+ ....++||...+..|...
T Consensus       215 ~~~~~~~Nva~ahilA~~aL~~-~~~~~~Gq~yfI~d~~p~  254 (361)
T KOG1430|consen  215 NDFTYGENVAWAHILAARALLD-KSPSVNGQFYFITDDTPV  254 (361)
T ss_pred             cceEEechhHHHHHHHHHHHHh-cCCccCceEEEEeCCCcc
Confidence            1122233233331    12222 567799999999888766

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.26  E-value=3.4e-10  Score=99.47  Aligned_cols=163  Identities=16%  Similarity=0.140  Sum_probs=115.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChh---HHHHHHHHHH-------hcCCcEEEEEcCCCC------HHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQ---VLDAAVSALR-------SLGIKAVGFEGDVRR------QEH   77 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~---~~~~~~~~~~-------~~~~~v~~~~~Dl~~------~~~   77 (299)
                      +++++|||+|.+|..+..+|..+ -++|++..|-++   ..+++.+.+.       ....++.++..|++.      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            47999999999999999998876 458999888654   2333333333       224689999999984      344


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .+++.+       .+|.++||++....-       ....+....|+.|+..+++...-.    +       ...+.+|||
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~~g----k-------~Kp~~yVSs  135 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAATG----K-------PKPLHYVSS  135 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHhcC----C-------CceeEEEee
Confidence            555554       689999999854321       113456778999999988877521    1       223999999


Q ss_pred             ccccccC--------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          158 TLHYTAS--------------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       158 ~~~~~~~--------------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                      ++.....                    .....|+-||.+.+.+++...     +.|+++.++.||++-.+
T Consensus       136 isv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-----~rGLpv~I~Rpg~I~gd  200 (382)
T COG3320         136 ISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-----DRGLPVTIFRPGYITGD  200 (382)
T ss_pred             eeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-----hcCCCeEEEecCeeecc
Confidence            8754221                    123679999999999887654     44899999999999543

>PRK12320 hypothetical protein; Provisional

Probab=99.20  E-value=1.7e-09  Score=104.10  Aligned_cols=186  Identities=12%  Similarity=0.037  Sum_probs=119.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|.||.+++.+|.++|++|++++|+....         ...++.++.+|+++.. +.+++       .++|+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA-------GEADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence            599999999999999999999999999999875321         1235788999999873 43333       268999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA  175 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKa  175 (299)
                      ||+|+....        .    ...+|+.++.++++++.    +.        +.+||++||..+.   +.  .|..   
T Consensus        65 IHLAa~~~~--------~----~~~vNv~Gt~nLleAA~----~~--------GvRiV~~SS~~G~---~~--~~~~---  112 (699)
T PRK12320         65 IHLAPVDTS--------A----PGGVGITGLAHVANAAA----RA--------GARLLFVSQAAGR---PE--LYRQ---  112 (699)
T ss_pred             EEcCccCcc--------c----hhhHHHHHHHHHHHHHH----Hc--------CCeEEEEECCCCC---Cc--cccH---
Confidence            999985321        0    12478888888877764    22        3479999986432   11  1221   


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHH----hcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR----DYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       176 al~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                           .+.+..    ..++.+..+.|+.+..+......  ......+.    ...++ .+...+|++++++.++...   
T Consensus       113 -----aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~--~r~I~~~l~~~~~~~pI-~vIyVdDvv~alv~al~~~---  177 (699)
T PRK12320        113 -----AETLVS----TGWAPSLVIRIAPPVGRQLDWMV--CRTVATLLRSKVSARPI-RVLHLDDLVRFLVLALNTD---  177 (699)
T ss_pred             -----HHHHHH----hcCCCEEEEeCceecCCCCcccH--hHHHHHHHHHHHcCCce-EEEEHHHHHHHHHHHHhCC---
Confidence                 222222    23578888888888654322111  11122211    11122 1248899999998888542   


Q ss_pred             ccCcEEEeCCccccC
Q 022335          252 VNGTTLIVDGGLWLS  266 (299)
Q Consensus       252 ~~G~~i~~dgg~~~~  266 (299)
                      ..| .+++.++..++
T Consensus       178 ~~G-iyNIG~~~~~S  191 (699)
T PRK12320        178 RNG-VVDLATPDTTN  191 (699)
T ss_pred             CCC-EEEEeCCCeeE
Confidence            235 88888886653

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.17  E-value=1.7e-09  Score=94.59  Aligned_cols=192  Identities=14%  Similarity=0.046  Sum_probs=116.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC-ccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK-LDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~-id~   94 (299)
                      +++||||+|.+|++++++|.++|++|.+++|+++..+         ...+..+.+|+.|++++...++.. +.+.+ +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            3899999999999999999999999999999986431         124566789999999999888643 22335 899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      ++++++...       .  ..+            ..+.+++.+++.+       -.+||++||.....+.+       .+
T Consensus        71 v~~~~~~~~-------~--~~~------------~~~~~i~aa~~~g-------v~~~V~~Ss~~~~~~~~-------~~  115 (285)
T TIGR03649        71 VYLVAPPIP-------D--LAP------------PMIKFIDFARSKG-------VRRFVLLSASIIEKGGP-------AM  115 (285)
T ss_pred             EEEeCCCCC-------C--hhH------------HHHHHHHHHHHcC-------CCEEEEeeccccCCCCc-------hH
Confidence            999876321       0  011            1123445555544       46899999865433211       22


Q ss_pred             HHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCCCCCCchHHhH---HH-HhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          175 AAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGMNKLAPDEINS---KA-RDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       175 aal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      ...+.+       +. . .|+...+++|+++..+.. ..........   .. ........+..++|+|+++..++....
T Consensus       116 ~~~~~~-------l~-~~~gi~~tilRp~~f~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~  186 (285)
T TIGR03649       116 GQVHAH-------LD-SLGGVEYTVLRPTWFMENFS-EEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV  186 (285)
T ss_pred             HHHHHH-------HH-hccCCCEEEEeccHHhhhhc-ccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC
Confidence            211111       11 3 389999999997743321 1100000000   00 001111246889999999988886432


Q ss_pred             CCccCcEEEeCCcc
Q 022335          250 KYVNGTTLIVDGGL  263 (299)
Q Consensus       250 ~~~~G~~i~~dgg~  263 (299)
                        ..|..+++-|+.
T Consensus       187 --~~~~~~~l~g~~  198 (285)
T TIGR03649       187 --APNTDYVVLGPE  198 (285)
T ss_pred             --cCCCeEEeeCCc
Confidence              234555554443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.17  E-value=7.6e-10  Score=93.13  Aligned_cols=224  Identities=14%  Similarity=0.031  Sum_probs=151.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEeC---ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH--GASVAIMGR---RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~--G~~Vv~~~r---~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..+.++||||.|.||...+..++..  ..+.+.++-   ...  ....++. ....+.+++..|+.+...+.-++.+   
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~---   78 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPV-RNSPNYKFVEGDIADADLVLYLFET---   78 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhh-ccCCCceEeeccccchHHHHhhhcc---
Confidence            3489999999999999999998875  444544432   111  1112222 2245789999999999998887763   


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---  164 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---  164 (299)
                        .++|.|+|.|+..........+    -+.++.|++++..|++.......          -.++|.+|+-.-+...   
T Consensus        79 --~~id~vihfaa~t~vd~s~~~~----~~~~~nnil~t~~Lle~~~~sg~----------i~~fvhvSTdeVYGds~~~  142 (331)
T KOG0747|consen   79 --EEIDTVIHFAAQTHVDRSFGDS----FEFTKNNILSTHVLLEAVRVSGN----------IRRFVHVSTDEVYGDSDED  142 (331)
T ss_pred             --CchhhhhhhHhhhhhhhhcCch----HHHhcCCchhhhhHHHHHHhccC----------eeEEEEecccceecCcccc
Confidence              4899999999865443222212    24578899999999888875542          3579999986543221   


Q ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC---------
Q 022335          165 ---------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM---------  226 (299)
Q Consensus       165 ---------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~---------  226 (299)
                               -....|+++|+|.+++.+++..+|    |+.+..+..+-|..|.......-..+........         
T Consensus       143 ~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy----~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~  218 (331)
T KOG0747|consen  143 AVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY----GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGL  218 (331)
T ss_pred             ccccccccCCCCCchHHHHHHHHHHHHHHhhcc----CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcc
Confidence                     134679999999999999998766    6999999998887664433322223333222221         


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..+.+...+|+++++...+-.   .-.|+..++.--+.+
T Consensus       219 ~~rs~l~veD~~ea~~~v~~K---g~~geIYNIgtd~e~  254 (331)
T KOG0747|consen  219 QTRSYLYVEDVSEAFKAVLEK---GELGEIYNIGTDDEM  254 (331)
T ss_pred             cceeeEeHHHHHHHHHHHHhc---CCccceeeccCcchh
Confidence            223467899999998888754   236888887654444

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.16  E-value=2.1e-09  Score=102.20  Aligned_cols=125  Identities=20%  Similarity=0.299  Sum_probs=87.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEEeCChh---HHHHHHHHH---------Hhc---------CCcEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQ---VLDAAVSAL---------RSL---------GIKAV   66 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~---~Vv~~~r~~~---~~~~~~~~~---------~~~---------~~~v~   66 (299)
                      .++||+|+||||+|.||..++++|++.+.   +|+++.|...   ..+.+.+++         ++.         ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            37899999999999999999999998764   5788888542   222222222         111         24688


Q ss_pred             EEEcCCCCH------HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022335           67 GFEGDVRRQ------EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKG  140 (299)
Q Consensus        67 ~~~~Dl~~~------~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~  140 (299)
                      ++..|++++      +..+.+.+       .+|+|||+|+....    +   +..+..+++|+.++.++++.+...-   
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f----~---~~~~~a~~vNV~GT~nLLelA~~~~---  258 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF----D---ERYDVAIDINTRGPCHLMSFAKKCK---  258 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc----c---cCHHHHHHHHHHHHHHHHHHHHHcC---
Confidence            999999987      33333333       69999999986531    1   3466788999999999988775321   


Q ss_pred             CCCCCCCCCceEEEecccc
Q 022335          141 GPGRSSAGGGSILNISATL  159 (299)
Q Consensus       141 ~~~~~~~~~g~iv~vsS~~  159 (299)
                      .       ..++|++|+..
T Consensus       259 ~-------lk~fV~vSTay  270 (605)
T PLN02503        259 K-------LKLFLQVSTAY  270 (605)
T ss_pred             C-------CCeEEEccCce
Confidence            1       24588888754

>PLN00016 RNA-binding protein; Provisional

Probab=99.16  E-value=5.1e-10  Score=102.01  Aligned_cols=201  Identities=19%  Similarity=0.175  Sum_probs=122.2

Q ss_pred             CCCCEEEEe----cCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH-------HHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335           12 LKGKVALIT----GGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAV-------SALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus        12 l~~k~vlIt----Gas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~-------~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      ...++||||    ||+|.||.+++++|+++|++|++++|+........       .++..  ..+.++.+|+++   +.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHh
Confidence            345789999    99999999999999999999999999875432221       12222  237888899876   333


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc
Q 022335           81 VVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH  160 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~  160 (299)
                      ++.     ..++|+|||+++..         .+           +    ++.++..+++.+       -.++|++||...
T Consensus       125 ~~~-----~~~~d~Vi~~~~~~---------~~-----------~----~~~ll~aa~~~g-------vkr~V~~SS~~v  168 (378)
T PLN00016        125 KVA-----GAGFDVVYDNNGKD---------LD-----------E----VEPVADWAKSPG-------LKQFLFCSSAGV  168 (378)
T ss_pred             hhc-----cCCccEEEeCCCCC---------HH-----------H----HHHHHHHHHHcC-------CCEEEEEccHhh
Confidence            321     13799999987621         11           1    222344444433       358999999765


Q ss_pred             cccCCC--------chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCC-----
Q 022335          161 YTASWY--------QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP-----  227 (299)
Q Consensus       161 ~~~~~~--------~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~-----  227 (299)
                      +.....        ...+. +|...+.+.+        ..++.+..++|+++..+...... ...+........+     
T Consensus       169 yg~~~~~p~~E~~~~~p~~-sK~~~E~~l~--------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~~~~~~~~~i~~~g  238 (378)
T PLN00016        169 YKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ--------KLGVNWTSFRPQYIYGPGNNKDC-EEWFFDRLVRGRPVPIPG  238 (378)
T ss_pred             cCCCCCCCCCCCCcCCCcc-hHHHHHHHHH--------HcCCCeEEEeceeEECCCCCCch-HHHHHHHHHcCCceeecC
Confidence            432111        01112 6766665432        34789999999988755322111 1111122211111     


Q ss_pred             ----CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 ----LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 ----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                          ...+...+|+|+++..++...  ...|+.+++-++..+
T Consensus       239 ~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~  278 (378)
T PLN00016        239 SGIQLTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRAV  278 (378)
T ss_pred             CCCeeeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCcc
Confidence                123567999999999888542  235788888776544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.16  E-value=8.7e-10  Score=96.50  Aligned_cols=209  Identities=15%  Similarity=0.051  Sum_probs=115.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      +|||||+|.||.++++.|+++|++|++++|+.+......        ...  ..|+.. +.       ..+.+.++|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~--~~~~~~-~~-------~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG--YKPWAP-LA-------ESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee--eecccc-cc-------hhhhcCCCCEEE
Confidence            689999999999999999999999999999876432211        001  112221 11       122345799999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----------C-
Q 022335           97 NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----------W-  165 (299)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----------~-  165 (299)
                      |+||.....  .....+.....+++|+.++.++++++...    +.     ....+|+.|+...+...          + 
T Consensus        63 h~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-----~~~~~i~~S~~~~yg~~~~~~~~E~~~~~  131 (292)
T TIGR01777        63 NLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAA----EQ-----KPKVFISASAVGYYGTSEDRVFTEEDSPA  131 (292)
T ss_pred             ECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhc----CC-----CceEEEEeeeEEEeCCCCCCCcCcccCCC
Confidence            999964321  12233455677889999988887777532    10     01234444543211100          0 


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch-HHhHH-----HHhcCCCCCCCCHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSK-----ARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~dva~  239 (299)
                      ....|+..+...+...+    .+. ..++.+.+++|+.+..+. ......- .....     .........+...+|+|+
T Consensus       132 ~~~~~~~~~~~~e~~~~----~~~-~~~~~~~ilR~~~v~G~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~  205 (292)
T TIGR01777       132 GDDFLAELCRDWEEAAQ----AAE-DLGTRVVLLRTGIVLGPK-GGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQ  205 (292)
T ss_pred             CCChHHHHHHHHHHHhh----hch-hcCCceEEEeeeeEECCC-cchhHHHHHHHhcCcccccCCCCcccccEeHHHHHH
Confidence            11123333333322222    222 458999999999986542 1111000 00000     111122235688999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCcc
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ++..++....  ..| .+++-++.
T Consensus       206 ~i~~~l~~~~--~~g-~~~~~~~~  226 (292)
T TIGR01777       206 LILFALENAS--ISG-PVNATAPE  226 (292)
T ss_pred             HHHHHhcCcc--cCC-ceEecCCC
Confidence            9999885422  233 45555444

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.15  E-value=7e-09  Score=101.43  Aligned_cols=143  Identities=17%  Similarity=0.144  Sum_probs=100.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ..+++|||||+|.||+++++.|.++|++|..                        ...|+++.+.++..+...     ++
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~-----~p  429 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV-----KP  429 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh-----CC
Confidence            3567999999999999999999999988731                        124688888887777654     79


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----------  162 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----------  162 (299)
                      |+|||+|+....... +...++-+..+++|+.++.++++++...            +.++|++||...+.          
T Consensus       430 d~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~------------g~~~v~~Ss~~v~~~~~~~~~~~~  496 (668)
T PLN02260        430 THVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN------------GLLMMNFATGCIFEYDAKHPEGSG  496 (668)
T ss_pred             CEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc------------CCeEEEEcccceecCCcccccccC
Confidence            999999996532111 2222344678899999999999988643            23466665532110          


Q ss_pred             -c-------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeC
Q 022335          163 -A-------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAP  201 (299)
Q Consensus       163 -~-------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~p  201 (299)
                       +       .+....|+.||.+.+.+++....    -..+|+..+..
T Consensus       497 ~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~----~~~~r~~~~~~  539 (668)
T PLN02260        497 IGFKEEDKPNFTGSFYSKTKAMVEELLREYDN----VCTLRVRMPIS  539 (668)
T ss_pred             CCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh----heEEEEEEecc
Confidence             1       11236799999999999877642    23577777664

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.14  E-value=8.2e-10  Score=92.93  Aligned_cols=226  Identities=17%  Similarity=0.204  Sum_probs=122.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      ++||||+|-||++++..|.+.|+.|+++.|++.+.+..          ..   ..+...+.+....+      ..+|+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~----------~~---~~v~~~~~~~~~~~------~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN----------LH---PNVTLWEGLADALT------LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh----------cC---ccccccchhhhccc------CCCCEEE
Confidence            58999999999999999999999999999998653331          11   11112222222211      1799999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH---
Q 022335           97 NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA---  173 (299)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s---  173 (299)
                      |-||..-....  .+ ++..+.   =+.+.+..++.+..++.+..+      +.++..-+|..++.+......|.=.   
T Consensus        62 NLAG~~I~~rr--Wt-~~~K~~---i~~SRi~~T~~L~e~I~~~~~------~P~~~isaSAvGyYG~~~~~~~tE~~~~  129 (297)
T COG1090          62 NLAGEPIAERR--WT-EKQKEE---IRQSRINTTEKLVELIAASET------KPKVLISASAVGYYGHSGDRVVTEESPP  129 (297)
T ss_pred             ECCCCcccccc--CC-HHHHHH---HHHHHhHHHHHHHHHHHhccC------CCcEEEecceEEEecCCCceeeecCCCC
Confidence            99995432211  11 111111   123667777888877775432      3444444555566554332222211   


Q ss_pred             -HHHHHHHHHHHHHHh--cCCCCeEEEEEeCCccCCCCC--CCCCCch-HHh--HHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          174 -KAAVDAITRNLALEW--GADYDIRVNGIAPGPIGDTPG--MNKLAPD-EIN--SKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       174 -Kaal~~l~~~la~e~--~~~~gi~v~~i~pG~v~t~~~--~~~~~~~-~~~--~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                       .-.+..+++.+-.+.  +...|+||+.+.-|.|-++..  ...+.+. ...  -.+.+.-....+...||+.+++.|++
T Consensus       130 g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll  209 (297)
T COG1090         130 GDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLL  209 (297)
T ss_pred             CCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHH
Confidence             223333443322221  124599999999998876421  1222110 000  00111111123678999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccCCCCCCc-hhHHHHHhHh
Q 022335          246 SDTGKYVNGTTLIVDGGLWLSRPRHLP-KDAVKQLSRT  282 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~~~~~~~-~~~~~~~~~~  282 (299)
                      ....  ++       |=+-++.|..+. ..+...+.+.
T Consensus       210 ~~~~--ls-------Gp~N~taP~PV~~~~F~~al~r~  238 (297)
T COG1090         210 ENEQ--LS-------GPFNLTAPNPVRNKEFAHALGRA  238 (297)
T ss_pred             hCcC--CC-------CcccccCCCcCcHHHHHHHHHHH
Confidence            6532  33       334444555544 3334444443

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.13  E-value=3.5e-10  Score=95.18  Aligned_cols=215  Identities=20%  Similarity=0.145  Sum_probs=145.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH----hcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR----SLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +|++||||-+|-=|..+|+.|.++|+.|+.+.|+.+...-..-.+.    ..+.+++.+.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            7899999999999999999999999999999887432111100121    12345889999999999999999988    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc--------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY--------  161 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~--------  161 (299)
                       .+|-+.|.++.++.    ..+.++-+.+.+++.+|+.+++.++.-+-  ..       ..++..-||..-+        
T Consensus        78 -~PdEIYNLaAQS~V----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~-------~~rfYQAStSE~fG~v~~~pq  143 (345)
T COG1089          78 -QPDEIYNLAAQSHV----GVSFEQPEYTADVDAIGTLRLLEAIRILG--EK-------KTRFYQASTSELYGLVQEIPQ  143 (345)
T ss_pred             -Cchhheeccccccc----cccccCcceeeeechhHHHHHHHHHHHhC--Cc-------ccEEEecccHHhhcCcccCcc
Confidence             89999998886543    23333345678899999999988775332  11       3567777664422        


Q ss_pred             ---ccCCCchHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCccCCCCCCCCCCchHHhH---------HHHhcCC
Q 022335          162 ---TASWYQIHVAAAKAAVDAITRNLALEWG--ADYDIRVNGIAPGPIGDTPGMNKLAPDEINS---------KARDYMP  227 (299)
Q Consensus       162 ---~~~~~~~~Y~~sKaal~~l~~~la~e~~--~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~---------~~~~~~~  227 (299)
                         .|+.....|+++|.+..-++...+..|+  .-.||-.|.=+|.  +...+...........         .+.+...
T Consensus       144 ~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~--Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldA  221 (345)
T COG1089         144 KETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL--RGETFVTRKITRAVARIKLGLQDKLYLGNLDA  221 (345)
T ss_pred             ccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC--CccceehHHHHHHHHHHHccccceEEeccccc
Confidence               3566788999999999999988887764  1225555555553  2121111111111111         1223345


Q ss_pred             CCCCCCHHHHHHHHHHHcCCC
Q 022335          228 LYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       228 ~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .+.++.+.|..++++.++.+.
T Consensus       222 kRDWG~A~DYVe~mwlmLQq~  242 (345)
T COG1089         222 KRDWGHAKDYVEAMWLMLQQE  242 (345)
T ss_pred             cccccchHHHHHHHHHHHccC
Confidence            567888899999988888543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.11  E-value=3e-10  Score=95.82  Aligned_cols=103  Identities=17%  Similarity=0.161  Sum_probs=80.3

Q ss_pred             CCEEEEecC-CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGG-GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGa-s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.+=.||.. +||||+++|++|+++|++|+++++...        +...    ..+.+|+++.++++++++.+.+.++++
T Consensus        14 D~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~i   81 (227)
T TIGR02114        14 DSVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE----PHPNLSIREIETTKDLLITLKELVQEH   81 (227)
T ss_pred             CCceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc----cCCcceeecHHHHHHHHHHHHHHcCCC
Confidence            445566666 678999999999999999999886321        1110    024689999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH  131 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  131 (299)
                      |++|||||+....++.+.+.++|++++.   .+.+.+.+
T Consensus        82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        82 DILIHSMAVSDYTPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             CEEEECCEeccccchhhCCHHHHhhhcc---hhhhhccc
Confidence            9999999987777888889999987744   34445544

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.94  E-value=8.3e-08  Score=88.69  Aligned_cols=250  Identities=17%  Similarity=0.064  Sum_probs=156.9

Q ss_pred             CCcCCCCCCEEEEecCC-ChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHH-Hhc---CCcEEEEEcCCCCHHHHHH
Q 022335            7 FKADILKGKVALITGGG-SGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSAL-RSL---GIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas-~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~-~~~---~~~v~~~~~Dl~~~~~v~~   80 (299)
                      ++.....++++||||++ +.||.+++..|++.|++|+++..+-+ +..+..+.+ ...   +..+.+++.+..+..+|+.
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            34456789999999998 67999999999999999998776543 223333333 222   4568889999999999999


Q ss_pred             HHHHHHHHcC--------------CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCC
Q 022335           81 VVESTFEHFG--------------KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSS  146 (299)
Q Consensus        81 ~~~~~~~~~g--------------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~  146 (299)
                      +++.+-++.-              .+|.++-.|++...+.+.+..... +..+.+-+....+++-.    +++....+..
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rligg----l~~~~s~r~v  543 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGG----LKKQGSSRGV  543 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHH----hhhhccccCc
Confidence            9999865321              467888888877666666654321 22223323333333333    3333333323


Q ss_pred             CCCceEEEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC
Q 022335          147 AGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM  226 (299)
Q Consensus       147 ~~~g~iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~  226 (299)
                      ..+-++|.=.|-. ..-+.+-.+|+-+|++++.+..-+..|-.....+.+..-..||++.+..+..   ++..-...+..
T Consensus       544 ~~R~hVVLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~---Ndiiv~aiEk~  619 (866)
T COG4982         544 DTRLHVVLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGH---NDIIVAAIEKA  619 (866)
T ss_pred             ccceEEEecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCC---cchhHHHHHHh
Confidence            3334555544321 1224567899999999999998888775224456666777899987654322   22222222222


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCC---ccCcEEEeCCccccC
Q 022335          227 PLYKLGEKWDIAMAALYLTSDTGKY---VNGTTLIVDGGLWLS  266 (299)
Q Consensus       227 ~~~~~~~~~dva~~~~~l~s~~~~~---~~G~~i~~dgg~~~~  266 (299)
                      -. +.-+++|+|..++-|++....-   -+=-..++.||+...
T Consensus       620 GV-~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         620 GV-RTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             Cc-eecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            22 2347889999999999765321   122445677888774

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.90  E-value=8.6e-08  Score=80.98  Aligned_cols=202  Identities=15%  Similarity=0.057  Sum_probs=129.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..+++++||||+|.||.+++..|..+|+.|+++|.-...-+.....+-. ..++..+.-|+..+     ++.       .
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~-------e   91 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK-------E   91 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-------H
Confidence            4578999999999999999999999999999998754433332222211 22455555566544     444       5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc----------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY----------  161 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~----------  161 (299)
                      +|.++|.|+...+-.+-.-+    .+++..|++++.+.+..+..-            +.+++..|+..-+          
T Consensus        92 vD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv------------~aR~l~aSTseVYgdp~~hpq~e  155 (350)
T KOG1429|consen   92 VDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRV------------GARFLLASTSEVYGDPLVHPQVE  155 (350)
T ss_pred             hhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHh------------CceEEEeecccccCCcccCCCcc
Confidence            78899998866553332222    247889999999987776433            4678887775532          


Q ss_pred             ------ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--CCchHHhHHHHhcCCC-----
Q 022335          162 ------TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPL-----  228 (299)
Q Consensus       162 ------~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~-----  228 (299)
                            .+......|...|-..+.|+....    +..||.+-...+--+..+.+.-.  -.-..+..+.....|+     
T Consensus       156 ~ywg~vnpigpr~cydegKr~aE~L~~~y~----k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~  231 (350)
T KOG1429|consen  156 TYWGNVNPIGPRSCYDEGKRVAETLCYAYH----KQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGD  231 (350)
T ss_pred             ccccccCcCCchhhhhHHHHHHHHHHHHhh----cccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcC
Confidence                  233456789999977766665555    45578888887765544432211  1112222333333333     


Q ss_pred             ----CCCCCHHHHHHHHHHHcC
Q 022335          229 ----YKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       229 ----~~~~~~~dva~~~~~l~s  246 (299)
                          +.+....|+.+.++.|..
T Consensus       232 G~qtRSF~yvsD~Vegll~Lm~  253 (350)
T KOG1429|consen  232 GKQTRSFQYVSDLVEGLLRLME  253 (350)
T ss_pred             CcceEEEEeHHHHHHHHHHHhc
Confidence                456778899999888884

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.86  E-value=1.8e-08  Score=88.20  Aligned_cols=84  Identities=23%  Similarity=0.266  Sum_probs=68.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh---hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK---QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++......+.+..+|+++.+++.+.++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467999999999 69999999999999997 99999996   67777777776555556667789888777766544   


Q ss_pred             HHcCCccEEEEcCCCC
Q 022335           87 EHFGKLDILVNAAAGN  102 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~  102 (299)
                          ..|+||||..+.
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                569999998654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.81  E-value=2.7e-08  Score=90.50  Aligned_cols=82  Identities=24%  Similarity=0.257  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCC
Q 022335           10 DILKGKVALITGG----------------GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR   73 (299)
Q Consensus        10 ~~l~~k~vlItGa----------------s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   73 (299)
                      .+|+||++|||||                ||++|+++|++|+++|++|++++++.+ ++        ...  .+..+|++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~~~--~~~~~dv~  252 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------TPA--GVKRIDVE  252 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------CCC--CcEEEccC
Confidence            4578999999999                555999999999999999999998752 11        111  13467999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCCCCC
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAAAGNFLV  105 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~  105 (299)
                      +.+++.+.+.   +.++++|++|||||+....
T Consensus       253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        253 SAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             CHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            9888777765   4578999999999986443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.81  E-value=3.6e-08  Score=83.67  Aligned_cols=197  Identities=19%  Similarity=0.160  Sum_probs=114.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      |+|+||+|.+|+.+++.|.+.+++|.++.|+.+  ....++++..+  +.++.+|+.+++++.+.++       ++|.|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEE
Confidence            689999999999999999999999999999983  23445555554  4567999999999888877       899999


Q ss_pred             EcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC----CchHHHH
Q 022335           97 NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----YQIHVAA  172 (299)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~----~~~~Y~~  172 (299)
                      ++.+...     + ..  ++        ....+++++..    .+       -.++| .||........    ....+-.
T Consensus        70 ~~~~~~~-----~-~~--~~--------~~~~li~Aa~~----ag-------Vk~~v-~ss~~~~~~~~~~~~p~~~~~~  121 (233)
T PF05368_consen   70 SVTPPSH-----P-SE--LE--------QQKNLIDAAKA----AG-------VKHFV-PSSFGADYDESSGSEPEIPHFD  121 (233)
T ss_dssp             EESSCSC-----C-CH--HH--------HHHHHHHHHHH----HT--------SEEE-ESEESSGTTTTTTSTTHHHHHH
T ss_pred             eecCcch-----h-hh--hh--------hhhhHHHhhhc----cc-------cceEE-EEEecccccccccccccchhhh
Confidence            9987543     1 11  11        11233444432    22       24566 45555443211    1122223


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC----chH---HhHHHHhcCCCCCC-CCHHHHHHHHHHH
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA----PDE---INSKARDYMPLYKL-GEKWDIAMAALYL  244 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~---~~~~~~~~~~~~~~-~~~~dva~~~~~l  244 (299)
                      .|..++.+.+        ..++....|.||+.-.. ......    ...   .............+ .+.+|+++.+..+
T Consensus       122 ~k~~ie~~l~--------~~~i~~t~i~~g~f~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~i  192 (233)
T PF05368_consen  122 QKAEIEEYLR--------ESGIPYTIIRPGFFMEN-LLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAI  192 (233)
T ss_dssp             HHHHHHHHHH--------HCTSEBEEEEE-EEHHH-HHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHH
T ss_pred             hhhhhhhhhh--------hccccceeccccchhhh-hhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHH
Confidence            5655543332        23789999999966321 111000    000   00000010111123 3789999999998


Q ss_pred             cCCCCCCccCcEEEeCC
Q 022335          245 TSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dg  261 (299)
                      +.+...+-.|..+.+-|
T Consensus       193 l~~p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  193 LLDPEKHNNGKTIFLAG  209 (233)
T ss_dssp             HHSGGGTTEEEEEEEGG
T ss_pred             HcChHHhcCCEEEEeCC
Confidence            87755544677777644

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.70  E-value=2.2e-07  Score=76.71  Aligned_cols=83  Identities=23%  Similarity=0.303  Sum_probs=68.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++++++|+||+|++|+.+++.|+++|++|++++|+.++++.+.+++.+.. ...+..+|..+.+++.+.+.       
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-------   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK-------   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh-------
Confidence            5789999999999999999999999999999999999998888888775321 23455678888888777665       


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      +.|++|++...
T Consensus        97 ~~diVi~at~~  107 (194)
T cd01078          97 GADVVFAAGAA  107 (194)
T ss_pred             cCCEEEECCCC
Confidence            57988887653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.63  E-value=1.2e-07  Score=92.88  Aligned_cols=163  Identities=19%  Similarity=0.205  Sum_probs=136.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHH---HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDA---AVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~---~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..|.++|+||-||+|..++..|..+|++ +|+.+|+--+.-.   ....++..+..|.+-..|++..+..+.++++. .+
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NK 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hh
Confidence            3789999999999999999999999999 7888887544322   34455667878888889999999999999865 45


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++.+..++|-|.+....-+++.+.+.|++.-+..+.++.++-+.-.....+         ---+|..||.+.-++..++.
T Consensus      1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---------LdyFv~FSSvscGRGN~GQt 1916 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---------LDYFVVFSSVSCGRGNAGQT 1916 (2376)
T ss_pred             cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc---------cceEEEEEeecccCCCCccc
Confidence            789999999999888888899999999999999999999987776554332         24688899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLA  185 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la  185 (299)
                      -|+.+..+.+.+++.-.
T Consensus      1917 NYG~aNS~MERiceqRr 1933 (2376)
T KOG1202|consen 1917 NYGLANSAMERICEQRR 1933 (2376)
T ss_pred             ccchhhHHHHHHHHHhh
Confidence            99999999999998644

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.62  E-value=1.9e-07  Score=78.95  Aligned_cols=101  Identities=16%  Similarity=0.122  Sum_probs=69.2

Q ss_pred             CCEEEEecCCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSG-IGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~g-iG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.+-.||+.|+| +|.++|++|+++|++|++++|+....       .....++.++.++     +.+++.+.+.+.++++
T Consensus        15 D~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-------~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~   82 (229)
T PRK06732         15 DSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-------PEPHPNLSIIEIE-----NVDDLLETLEPLVKDH   82 (229)
T ss_pred             CCceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-------CCCCCCeEEEEEe-----cHHHHHHHHHHHhcCC
Confidence            446678877665 99999999999999999998764210       0011245555532     2333334444455689


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGT  126 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  126 (299)
                      |++|||||+....+....+.++|.+++++|....
T Consensus        83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            9999999987655666667888888888876543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.60  E-value=1e-05  Score=70.05  Aligned_cols=196  Identities=17%  Similarity=0.057  Sum_probs=119.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|.+|++++++|.++|++|+++.|+.+......       ..+.+...|+.+++++...++       ++|.+
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~~   67 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDGV   67 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence            6999999999999999999999999999999998766654       568889999999999888877       78998


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA  175 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKa  175 (299)
                      ++..+... ... .        .......+.....+..-     ..       ..+++.+|......  .....|..+|.
T Consensus        68 ~~i~~~~~-~~~-~--------~~~~~~~~~~~~a~~a~-----~~-------~~~~~~~s~~~~~~--~~~~~~~~~~~  123 (275)
T COG0702          68 LLISGLLD-GSD-A--------FRAVQVTAVVRAAEAAG-----AG-------VKHGVSLSVLGADA--ASPSALARAKA  123 (275)
T ss_pred             EEEecccc-ccc-c--------hhHHHHHHHHHHHHHhc-----CC-------ceEEEEeccCCCCC--CCccHHHHHHH
Confidence            88887543 211 1        01111222222222221     11       34577777776554  23567888888


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEe-CCccCCCCCCCCCCchHHhHHHHhcCCC----CCCCCHHHHHHHHHHHcCCCCC
Q 022335          176 AVDAITRNLALEWGADYDIRVNGIA-PGPIGDTPGMNKLAPDEINSKARDYMPL----YKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       176 al~~l~~~la~e~~~~~gi~v~~i~-pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ..+...++.        |+.-..+. ++++... ....  ............+.    ......+|++..+...+.... 
T Consensus       124 ~~e~~l~~s--------g~~~t~lr~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~-  191 (275)
T COG0702         124 AVEAALRSS--------GIPYTTLRRAAFYLGA-GAAF--IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA-  191 (275)
T ss_pred             HHHHHHHhc--------CCCeEEEecCeeeecc-chhH--HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc-
Confidence            877766543        45544444 4443211 0000  00001111000111    124678899998877775443 


Q ss_pred             CccCcEEEeCCc
Q 022335          251 YVNGTTLIVDGG  262 (299)
Q Consensus       251 ~~~G~~i~~dgg  262 (299)
                       ..|+.+.+-|-
T Consensus       192 -~~~~~~~l~g~  202 (275)
T COG0702         192 -TAGRTYELAGP  202 (275)
T ss_pred             -ccCcEEEccCC
Confidence             44555555443

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.53  E-value=3.9e-07  Score=82.66  Aligned_cols=83  Identities=27%  Similarity=0.287  Sum_probs=63.6

Q ss_pred             CCCCCEEEEecC---------------CCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC
Q 022335           11 ILKGKVALITGG---------------GSG-IGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR   74 (299)
Q Consensus        11 ~l~~k~vlItGa---------------s~g-iG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   74 (299)
                      +|+||++|||||               |+| +|.++|++|.++|++|+++.++....         ...  ....+|+++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~  250 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVST  250 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEecc
Confidence            578999999999               666 99999999999999999988765320         111  224679999


Q ss_pred             HHHH-HHHHHHHHHHcCCccEEEEcCCCCCCCCC
Q 022335           75 QEHA-KKVVESTFEHFGKLDILVNAAAGNFLVSA  107 (299)
Q Consensus        75 ~~~v-~~~~~~~~~~~g~id~lv~~ag~~~~~~~  107 (299)
                      .+++ ++++++.   ++++|++|+|||+....+.
T Consensus       251 ~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       251 AEEMLEAALNEL---AKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             HHHHHHHHHHhh---cccCCEEEEcccccccccc
Confidence            9998 5555443   4789999999998755443

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.53  E-value=3.5e-06  Score=75.98  Aligned_cols=177  Identities=17%  Similarity=0.126  Sum_probs=105.7

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +.+....+-.+|+|+||+|++|+-+++.|.++|..|.++.|+.+..+.... +.........+..|.....++...+.+.
T Consensus        71 ~~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~  149 (411)
T KOG1203|consen   71 PPNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEA  149 (411)
T ss_pred             cCCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhh
Confidence            444556678899999999999999999999999999999999987776655 1111222344444555444333322222


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      ..  -...+++.++|.-....  +     ..--.++.+.|..+++.+..    ...       -.++|.+||+.+.....
T Consensus       150 ~~--~~~~~v~~~~ggrp~~e--d-----~~~p~~VD~~g~knlvdA~~----~aG-------vk~~vlv~si~~~~~~~  209 (411)
T KOG1203|consen  150 VP--KGVVIVIKGAGGRPEEE--D-----IVTPEKVDYEGTKNLVDACK----KAG-------VKRVVLVGSIGGTKFNQ  209 (411)
T ss_pred             cc--ccceeEEecccCCCCcc--c-----CCCcceecHHHHHHHHHHHH----HhC-------CceEEEEEeecCcccCC
Confidence            11  13456666766433221  1     11112355556667766662    222       35799999998877665


Q ss_pred             CchHHHHHHHHHHHHHHHH-HHHhcCCCCeEEEEEeCCccCC
Q 022335          166 YQIHVAAAKAAVDAITRNL-ALEWGADYDIRVNGIAPGPIGD  206 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~l-a~e~~~~~gi~v~~i~pG~v~t  206 (299)
                      ....+..  .++-.-.+-. ...+. +.|+.-..|.||....
T Consensus       210 ~~~~~~~--~~~~~~~k~~~e~~~~-~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  210 PPNILLL--NGLVLKAKLKAEKFLQ-DSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             Cchhhhh--hhhhhHHHHhHHHHHH-hcCCCcEEEecccccc
Confidence            5444442  1111112122 23333 6689999999987754

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.44  E-value=4.9e-06  Score=76.22  Aligned_cols=126  Identities=17%  Similarity=0.275  Sum_probs=87.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEEeCChh---HHH--------HHHHHHHhcC----CcEEEEEcCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQ---VLD--------AAVSALRSLG----IKAVGFEGDV   72 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~---~Vv~~~r~~~---~~~--------~~~~~~~~~~----~~v~~~~~Dl   72 (299)
                      -++||+++||||+|.+|.-+...|++---   +++++-|...   .-+        .+.+.+.+..    .++..+..|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            46899999999999999999999997632   4677666421   112        2333444332    4677888888


Q ss_pred             CCH------HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCC
Q 022335           73 RRQ------EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSS  146 (299)
Q Consensus        73 ~~~------~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~  146 (299)
                      +++      .+.+.+.+       .+|++||+|+...       -.|.++..+.+|.+|+.++.+.+-....-       
T Consensus        89 ~~~~LGis~~D~~~l~~-------eV~ivih~AAtvr-------Fde~l~~al~iNt~Gt~~~l~lak~~~~l-------  147 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLAD-------EVNIVIHSAATVR-------FDEPLDVALGINTRGTRNVLQLAKEMVKL-------  147 (467)
T ss_pred             cCcccCCChHHHHHHHh-------cCCEEEEeeeeec-------cchhhhhhhhhhhHhHHHHHHHHHHhhhh-------
Confidence            865      33333333       7999999998543       23556778899999999999988765543       


Q ss_pred             CCCceEEEeccccc
Q 022335          147 AGGGSILNISATLH  160 (299)
Q Consensus       147 ~~~g~iv~vsS~~~  160 (299)
                         ..++.+|....
T Consensus       148 ---~~~vhVSTAy~  158 (467)
T KOG1221|consen  148 ---KALVHVSTAYS  158 (467)
T ss_pred             ---heEEEeehhhe
Confidence               34777776544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.39  E-value=2.1e-05  Score=62.60  Aligned_cols=149  Identities=15%  Similarity=0.068  Sum_probs=100.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      .+.|+||||-.|..|+++..++|+.|+.+.||+++....        ..+.+++.|+.+++++.+.+.       +.|+|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~DaV   66 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDAV   66 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCceE
Confidence            588999999999999999999999999999999865442        247788999999999877666       89999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC--------CC-
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS--------WY-  166 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~--------~~-  166 (299)
                      |...|.....     ..+   .+.        ...++++..++...       ..|++.|+...+..-.        |. 
T Consensus        67 IsA~~~~~~~-----~~~---~~~--------k~~~~li~~l~~ag-------v~RllVVGGAGSL~id~g~rLvD~p~f  123 (211)
T COG2910          67 ISAFGAGASD-----NDE---LHS--------KSIEALIEALKGAG-------VPRLLVVGGAGSLEIDEGTRLVDTPDF  123 (211)
T ss_pred             EEeccCCCCC-----hhH---HHH--------HHHHHHHHHHhhcC-------CeeEEEEcCccceEEcCCceeecCCCC
Confidence            9998865321     111   111        12455566666544       5789999887664322        22 


Q ss_pred             -chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          167 -QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       167 -~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                       -.-|..+++.-+. -+.|..+    .++.-.-++|..+..|
T Consensus       124 P~ey~~~A~~~ae~-L~~Lr~~----~~l~WTfvSPaa~f~P  160 (211)
T COG2910         124 PAEYKPEALAQAEF-LDSLRAE----KSLDWTFVSPAAFFEP  160 (211)
T ss_pred             chhHHHHHHHHHHH-HHHHhhc----cCcceEEeCcHHhcCC
Confidence             2234444444333 3344433    3477778888765443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.36  E-value=2.1e-06  Score=77.12  Aligned_cols=77  Identities=21%  Similarity=0.365  Sum_probs=66.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +.+||.|+ |++|+.+|..|+++| .+|++++|+.+++.+..+..   ..++..+.+|+.+.+.+.++++       ..|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cCC
Confidence            46899999 999999999999999 88999999998877765543   3379999999999999999888       459


Q ss_pred             EEEEcCCCC
Q 022335           94 ILVNAAAGN  102 (299)
Q Consensus        94 ~lv~~ag~~  102 (299)
                      +|||++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999998754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.35  E-value=5.7e-06  Score=64.06  Aligned_cols=78  Identities=22%  Similarity=0.398  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++++++|.|+ ||.|++++..|++.|++ |+++.|+.++++++.+++.  +..+.++..+  +   +.+.+.     
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~~--~---~~~~~~-----   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPLE--D---LEEALQ-----   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEGG--G---HCHHHH-----
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeHH--H---HHHHHh-----
Confidence            3688999999998 89999999999999999 9999999999999988882  2335555443  2   222222     


Q ss_pred             cCCccEEEEcCCCC
Q 022335           89 FGKLDILVNAAAGN  102 (299)
Q Consensus        89 ~g~id~lv~~ag~~  102 (299)
                        ..|++|++.+..
T Consensus        75 --~~DivI~aT~~~   86 (135)
T PF01488_consen   75 --EADIVINATPSG   86 (135)
T ss_dssp             --TESEEEE-SSTT
T ss_pred             --hCCeEEEecCCC
Confidence              789999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.25  E-value=5.9e-06  Score=75.60  Aligned_cols=76  Identities=21%  Similarity=0.367  Sum_probs=60.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |+|.|+ |.+|+.+++.|++++-  +|++++|+.++++++.+++  .+.++.++.+|+.+.++++++++       +.|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 9999999999999874  7999999999888877765  45689999999999999888877       5699


Q ss_pred             EEEcCCCC
Q 022335           95 LVNAAAGN  102 (299)
Q Consensus        95 lv~~ag~~  102 (299)
                      |||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.24  E-value=3.7e-05  Score=63.23  Aligned_cols=201  Identities=16%  Similarity=0.146  Sum_probs=119.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++++|||++|=+|.||.+.+.++|.   +.++.+..                     .+|+++.++.+++++..     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence            5799999999999999999998875   34444432                     46999999999999875     7


Q ss_pred             ccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc---------
Q 022335           92 LDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY---------  161 (299)
Q Consensus        92 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~---------  161 (299)
                      +.+|||.|+.... -.--..+.+-|+..+++|-    ++++.+...-           -.++++..|..-+         
T Consensus        56 PthVIhlAAmVGGlf~N~~ynldF~r~Nl~ind----NVlhsa~e~g-----------v~K~vsclStCIfPdkt~yPId  120 (315)
T KOG1431|consen   56 PTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIND----NVLHSAHEHG-----------VKKVVSCLSTCIFPDKTSYPID  120 (315)
T ss_pred             CceeeehHhhhcchhhcCCCchHHHhhcceech----hHHHHHHHhc-----------hhhhhhhcceeecCCCCCCCCC
Confidence            8899998852211 0001234555555554432    2222222221           1223444332111         


Q ss_pred             -------ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-----Cch-------------
Q 022335          162 -------TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-----APD-------------  216 (299)
Q Consensus       162 -------~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-----~~~-------------  216 (299)
                             -+.+....|+-+|..+.-..+..+.+++    -...++.|--+..+.-+-..     .+.             
T Consensus       121 Etmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg----~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gt  196 (315)
T KOG1431|consen  121 ETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG----RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGT  196 (315)
T ss_pred             HHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCC
Confidence                   1224567799999888888888888875    23444444433333211111     110             


Q ss_pred             HHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          217 EINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +...-+....|++-+...+|.|++++|++.+-+   .=+.|++.-|.
T Consensus       197 d~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~---~vEpiils~ge  240 (315)
T KOG1431|consen  197 DELTVWGSGSPLRQFIYSDDLADLFIWVLREYE---GVEPIILSVGE  240 (315)
T ss_pred             ceEEEecCCChHHHHhhHhHHHHHHHHHHHhhc---CccceEeccCc
Confidence            011122334577778888999999999996532   33556665554

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.22  E-value=2.4e-05  Score=66.52  Aligned_cols=207  Identities=19%  Similarity=0.203  Sum_probs=128.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++|-++-|.||+|.+|+.++.+|++.|-+|++--|-.+.   -..+++-.+  +++.++..|+.|++|++++++.    
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~---~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~----  130 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEY---DPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH----  130 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCcc---chhheeecccccceeeeccCCCCHHHHHHHHHh----
Confidence            5779999999999999999999999999999998886532   122222222  4799999999999999999984    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                         -++|||..|--.+..  +.+      .-++|..++-.+.+..-    +..       --++|.+|+..+..  ..-.
T Consensus       131 ---sNVVINLIGrd~eTk--nf~------f~Dvn~~~aerlArick----e~G-------VerfIhvS~Lganv--~s~S  186 (391)
T KOG2865|consen  131 ---SNVVINLIGRDYETK--NFS------FEDVNVHIAERLARICK----EAG-------VERFIHVSCLGANV--KSPS  186 (391)
T ss_pred             ---CcEEEEeeccccccC--Ccc------cccccchHHHHHHHHHH----hhC-------hhheeehhhccccc--cChH
Confidence               589999998544321  111      12455555555544432    221       34799999987543  2344


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHH--HhcCCCCCC--------CCHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--RDYMPLYKL--------GEKWDIA  238 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~--------~~~~dva  238 (299)
                      -|--||++-+--++   .++.     ....|.|.-+..+.  ..+. ......+  ....|+...        ...-|||
T Consensus       187 r~LrsK~~gE~aVr---dafP-----eAtIirPa~iyG~e--Drfl-n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVa  255 (391)
T KOG2865|consen  187 RMLRSKAAGEEAVR---DAFP-----EATIIRPADIYGTE--DRFL-NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVA  255 (391)
T ss_pred             HHHHhhhhhHHHHH---hhCC-----cceeechhhhcccc--hhHH-HHHHHHHHhcCceeeecCCcceeeccEEEehHH
Confidence            56677776654443   3332     35567776664321  0000 0011111  222333322        2345899


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCC
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      .+|+.-+.+..  -.|..+..-|
T Consensus       256 a~IvnAvkDp~--s~Gktye~vG  276 (391)
T KOG2865|consen  256 AAIVNAVKDPD--SMGKTYEFVG  276 (391)
T ss_pred             HHHHHhccCcc--ccCceeeecC
Confidence            99988886553  4677776654

>PLN00106 malate dehydrogenase

Probab=98.21  E-value=1.3e-05  Score=71.00  Aligned_cols=150  Identities=12%  Similarity=0.052  Sum_probs=94.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      -..++|+|||++|.+|..++..|+.++.  .++++|.++  .+....++.+......+  .++++.++..+.+       
T Consensus        16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i--~~~~~~~d~~~~l-------   84 (323)
T PLN00106         16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQV--RGFLGDDQLGDAL-------   84 (323)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceE--EEEeCCCCHHHHc-------
Confidence            3457899999999999999999997655  699999987  23323344433322222  2433333333333       


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc--------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY--------  161 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~--------  161 (299)
                      .+.|++|+.||.....   .   ..+++.+..|+.....    +.+.+.+..+       ..||+++|....        
T Consensus        85 ~~aDiVVitAG~~~~~---g---~~R~dll~~N~~i~~~----i~~~i~~~~p-------~aivivvSNPvD~~~~i~t~  147 (323)
T PLN00106         85 KGADLVIIPAGVPRKP---G---MTRDDLFNINAGIVKT----LCEAVAKHCP-------NALVNIISNPVNSTVPIAAE  147 (323)
T ss_pred             CCCCEEEEeCCCCCCC---C---CCHHHHHHHHHHHHHH----HHHHHHHHCC-------CeEEEEeCCCccccHHHHHH
Confidence            3789999999975331   2   2355667777776444    4555555542       345555554432        


Q ss_pred             -----ccCCCchHHHHHHHHHHHHHHHHHHHhc
Q 022335          162 -----TASWYQIHVAAAKAAVDAITRNLALEWG  189 (299)
Q Consensus       162 -----~~~~~~~~Y~~sKaal~~l~~~la~e~~  189 (299)
                           .+++..-.|+.++.-...|-..++.+++
T Consensus       148 ~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        148 VLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             HHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence                 2344456778887677778888888875

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.17  E-value=1.2e-05  Score=75.03  Aligned_cols=77  Identities=27%  Similarity=0.412  Sum_probs=60.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +.++...+++...+  +.++..|..+            +..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHh
Confidence            46799999999888 99999999999999999999975 44555555565444  5577777775            123


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      +++|+||+++|+.
T Consensus        67 ~~~d~vv~~~g~~   79 (450)
T PRK14106         67 EGVDLVVVSPGVP   79 (450)
T ss_pred             hcCCEEEECCCCC
Confidence            5799999999974

>PRK09620 hypothetical protein; Provisional

Probab=98.09  E-value=4.9e-06  Score=70.20  Aligned_cols=83  Identities=30%  Similarity=0.364  Sum_probs=51.4

Q ss_pred             CCCCEEEEecCC----------------ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH
Q 022335           12 LKGKVALITGGG----------------SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ   75 (299)
Q Consensus        12 l~~k~vlItGas----------------~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   75 (299)
                      |+||++|||+|.                |.+|.++|++|.++|+.|++++........   .+. .+..+..+..    .
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s----~   72 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEG----I   72 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEec----H
Confidence            479999999886                999999999999999999988864321000   000 0112223333    2


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCC
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNF  103 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~  103 (299)
                      .+..+.+.++... .++|++||+|++..
T Consensus        73 ~d~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         73 IDLQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHHHHhcc-cCCCEEEECccccc
Confidence            2222222222211 26899999999753

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.07  E-value=2.9e-05  Score=69.02  Aligned_cols=73  Identities=21%  Similarity=0.308  Sum_probs=55.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-C-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKH-G-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~-G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++++++++||||+|.||..++++|+++ | .++++++|+..+++.+.+++..         .|+.   ++.       +.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~~  212 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------EA  212 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------HH
Confidence            588999999999999999999999865 5 5799999998887777665521         2222   222       23


Q ss_pred             cCCccEEEEcCCCC
Q 022335           89 FGKLDILVNAAAGN  102 (299)
Q Consensus        89 ~g~id~lv~~ag~~  102 (299)
                      +...|++|+.++..
T Consensus       213 l~~aDiVv~~ts~~  226 (340)
T PRK14982        213 LPEADIVVWVASMP  226 (340)
T ss_pred             HccCCEEEECCcCC
Confidence            34789999999854

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.92  E-value=3.8e-05  Score=63.91  Aligned_cols=216  Identities=20%  Similarity=0.117  Sum_probs=132.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-----LDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-----~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|++||||-+|.=|..++.-|+.+|+.|..+-|+.+.     .+.+...-. ..++..+.+-.|++|..++.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            4589999999999999999999999999988776543     222222111 22456788889999999999999988  


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-------
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-------  160 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-------  160 (299)
                         +++-+.|.|+..+..-..+++    +-+-++...|++.++.++-..-...        +-++--.|+..-       
T Consensus       106 ---kPtEiYnLaAQSHVkvSFdlp----eYTAeVdavGtLRlLdAi~~c~l~~--------~VrfYQAstSElyGkv~e~  170 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKVSFDLP----EYTAEVDAVGTLRLLDAIRACRLTE--------KVRFYQASTSELYGKVQEI  170 (376)
T ss_pred             ---CchhhhhhhhhcceEEEeecc----cceeeccchhhhhHHHHHHhcCccc--------ceeEEecccHhhcccccCC
Confidence               778888888765543222222    2344677788888887775442222        234444443221       


Q ss_pred             ----cccCCCchHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCccCCCCCCCCCCchHHhH---------HHHhc
Q 022335          161 ----YTASWYQIHVAAAKAAVDAITRNLALEWG--ADYDIRVNGIAPGPIGDTPGMNKLAPDEINS---------KARDY  225 (299)
Q Consensus       161 ----~~~~~~~~~Y~~sKaal~~l~~~la~e~~--~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~---------~~~~~  225 (299)
                          ..|+.....|+++|.+..=++-..+..|.  .-.||-.|.=+|--=  +.+...........         ...+.
T Consensus       171 PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRG--enFVTRKItRsvakI~~gqqe~~~LGNL  248 (376)
T KOG1372|consen  171 PQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRG--ENFVTRKITRSVAKISLGQQEKIELGNL  248 (376)
T ss_pred             CcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccc--cchhhHHHHHHHHHhhhcceeeEEecch
Confidence                23555678999999776555545554442  133666666666311  11111111111111         11233


Q ss_pred             CCCCCCCCHHHHHHHHHHHcCCC
Q 022335          226 MPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       226 ~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      ...+.++.+.|-.++++.++.+.
T Consensus       249 ~a~RDWGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  249 SALRDWGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             hhhcccchhHHHHHHHHHHHhcC
Confidence            45567788889999988887543

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.91  E-value=4.7e-05  Score=66.63  Aligned_cols=79  Identities=18%  Similarity=0.228  Sum_probs=68.9

Q ss_pred             EEEecCCChHHHHHHHHHHH----cCCeEEEEeCChhHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           17 ALITGGGSGIGFEISTQFGK----HGASVAIMGRRKQVLDAAVSALRSLG----IKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        17 vlItGas~giG~aia~~la~----~G~~Vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++|.||||.-|..++.++..    .|.++.+++||+.++++..+.+.+..    ....++.||.+|++++.+++.+    
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~----   83 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ----   83 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh----
Confidence            89999999999999999999    78889999999999999999887653    2233889999999999999885    


Q ss_pred             cCCccEEEEcCCCC
Q 022335           89 FGKLDILVNAAAGN  102 (299)
Q Consensus        89 ~g~id~lv~~ag~~  102 (299)
                         ..++|||+|..
T Consensus        84 ---~~vivN~vGPy   94 (423)
T KOG2733|consen   84 ---ARVIVNCVGPY   94 (423)
T ss_pred             ---hEEEEeccccc
Confidence               47899999854

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.87  E-value=0.0001  Score=65.37  Aligned_cols=148  Identities=11%  Similarity=0.046  Sum_probs=89.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++.++++|||+.|.+|..++..|+.++  ..++++|++  ..+....++.+...+..  ..+.+++.+..+.++     
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~~--v~~~td~~~~~~~l~-----   75 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPAK--VTGYADGELWEKALR-----   75 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCce--EEEecCCCchHHHhC-----
Confidence            4567799999999999999999999654  569999993  33333334444332222  234444443333333     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc--------
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH--------  160 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~--------  160 (299)
                        +.|+||+++|.....   .   +.+.+.+..|+...-.+    .+.|++..       ..+||+++|...        
T Consensus        76 --gaDvVVitaG~~~~~---~---~tR~dll~~N~~i~~~i----~~~i~~~~-------~~~iviv~SNPvdv~~~~~~  136 (321)
T PTZ00325         76 --GADLVLICAGVPRKP---G---MTRDDLFNTNAPIVRDL----VAAVASSA-------PKAIVGIVSNPVNSTVPIAA  136 (321)
T ss_pred             --CCCEEEECCCCCCCC---C---CCHHHHHHHHHHHHHHH----HHHHHHHC-------CCeEEEEecCcHHHHHHHHH
Confidence              789999999964321   1   23455677777655444    55555554       345777777432        


Q ss_pred             -----cccCCCchHHHHHHHHHH--HHHHHHHHHh
Q 022335          161 -----YTASWYQIHVAAAKAAVD--AITRNLALEW  188 (299)
Q Consensus       161 -----~~~~~~~~~Y~~sKaal~--~l~~~la~e~  188 (299)
                           ..+.+..-.|+.+  .|+  .|-..++..+
T Consensus       137 ~~~~~~sg~p~~~viG~g--~LDs~R~r~~la~~l  169 (321)
T PTZ00325        137 ETLKKAGVYDPRKLFGVT--TLDVVRARKFVAEAL  169 (321)
T ss_pred             hhhhhccCCChhheeech--hHHHHHHHHHHHHHh
Confidence                 1233445567776  254  4555666665

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.78  E-value=0.00015  Score=63.33  Aligned_cols=76  Identities=28%  Similarity=0.417  Sum_probs=56.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+++.... .+.+   ++    +..       +..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~~-------~~~  183 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----ELQ-------EEL  183 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cch-------hcc
Confidence            577999999997 899999999999999 789999999998888887775321 1111   11    111       122


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      ...|+|||+....
T Consensus       184 ~~~DivInaTp~g  196 (278)
T PRK00258        184 ADFDLIINATSAG  196 (278)
T ss_pred             ccCCEEEECCcCC
Confidence            4689999998654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.78  E-value=0.0002  Score=56.58  Aligned_cols=76  Identities=24%  Similarity=0.365  Sum_probs=56.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++++++|+|+ |++|.++++.|.+.| .+|++++|+.+..++..+++....     +..+..+.++.          ..
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~~   80 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------LA   80 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------cc
Confidence            56899999998 899999999999996 789999999988877776664321     22233333332          24


Q ss_pred             CccEEEEcCCCCC
Q 022335           91 KLDILVNAAAGNF  103 (299)
Q Consensus        91 ~id~lv~~ag~~~  103 (299)
                      ..|++|++.....
T Consensus        81 ~~Dvvi~~~~~~~   93 (155)
T cd01065          81 EADLIINTTPVGM   93 (155)
T ss_pred             cCCEEEeCcCCCC
Confidence            7899999987543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.75  E-value=0.00033  Score=60.86  Aligned_cols=76  Identities=18%  Similarity=0.316  Sum_probs=57.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+++...+ .+.....|     +.         ....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~~---------~~~~  178 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMD-----EL---------PLHR  178 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----hh---------cccC
Confidence            45889999999 699999999999999999999999988888888775433 22222211     10         1236


Q ss_pred             ccEEEEcCCCCC
Q 022335           92 LDILVNAAAGNF  103 (299)
Q Consensus        92 id~lv~~ag~~~  103 (299)
                      .|+|||+.+...
T Consensus       179 ~DivInatp~gm  190 (270)
T TIGR00507       179 VDLIINATSAGM  190 (270)
T ss_pred             ccEEEECCCCCC
Confidence            899999998643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.71  E-value=0.00037  Score=61.38  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=55.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|++++|+|+++++|.+++..+.+.|.+|+++++++++.+.+.    +.+.+.   .+|..+.+..+.+.+...  ..++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  214 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR----QAGADA---VFNYRAEDLADRILAATA--GQGV  214 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EEeCCCcCHHHHHHHHcC--CCce
Confidence            5899999999999999999999999999999999876655442    233221   134444444444332221  1369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.+++++|
T Consensus       215 d~vi~~~~  222 (325)
T cd08253         215 DVIIEVLA  222 (325)
T ss_pred             EEEEECCc
Confidence            99999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.67  E-value=0.00031  Score=57.20  Aligned_cols=79  Identities=28%  Similarity=0.341  Sum_probs=49.2

Q ss_pred             CCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH
Q 022335           12 LKGKVALITGG----------------GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ   75 (299)
Q Consensus        12 l~~k~vlItGa----------------s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   75 (299)
                      |+||+||||+|                ||..|.++|+++..+|+.|.++..... +.        ....+..+.  +.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~--------~p~~~~~i~--v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP--------PPPGVKVIR--VESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEEE---SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc--------ccccceEEE--ecch
Confidence            57999999987                488999999999999999999887642 11        012344443  5555


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCC
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFL  104 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~  104 (299)
                      ++..+.+.   +.+..-|++|++|++...
T Consensus        70 ~em~~~~~---~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   70 EEMLEAVK---ELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHH---HHGGGGSEEEE-SB--SE
T ss_pred             hhhhhhhc---cccCcceeEEEecchhhe
Confidence            55555544   444556999999997643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.66  E-value=0.00013  Score=68.15  Aligned_cols=79  Identities=18%  Similarity=0.261  Sum_probs=54.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++||+++|||+++ +|.++|+.|+++|++|++.+++........+++...+.  .+...+  +..++   ..      ..
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~--~~~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGI--KVICGS--HPLEL---LD------ED   68 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCC--EEEeCC--CCHHH---hc------Cc
Confidence            5799999999986 99999999999999999999876444444455555443  322221  11111   11      14


Q ss_pred             ccEEEEcCCCCCC
Q 022335           92 LDILVNAAAGNFL  104 (299)
Q Consensus        92 id~lv~~ag~~~~  104 (299)
                      +|+||+++|+...
T Consensus        69 ~d~vV~s~gi~~~   81 (447)
T PRK02472         69 FDLMVKNPGIPYT   81 (447)
T ss_pred             CCEEEECCCCCCC
Confidence            8999999998644

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.65  E-value=0.001  Score=57.98  Aligned_cols=77  Identities=21%  Similarity=0.267  Sum_probs=62.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      .-++|.||+|-.|.-++++|+.+|.+-++.+|+..++..+.+++   +.+...+++..  ++.+++.++       +.++
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~V   74 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQV   74 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cceE
Confidence            35899999999999999999999999999999999999887776   44455555554  666666555       7899


Q ss_pred             EEEcCCCCC
Q 022335           95 LVNAAAGNF  103 (299)
Q Consensus        95 lv~~ag~~~  103 (299)
                      |+||+|...
T Consensus        75 VlncvGPyt   83 (382)
T COG3268          75 VLNCVGPYT   83 (382)
T ss_pred             EEecccccc
Confidence            999999543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.63  E-value=0.00034  Score=62.30  Aligned_cols=117  Identities=14%  Similarity=0.200  Sum_probs=68.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-------CeEEEEeCChhH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHG-------ASVAIMGRRKQV--LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G-------~~Vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +++||||+|.+|.+++..|+..+       ..|+++++++..  ++...-++.+..   .....|++...+..+      
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---~~~~~~~~~~~~~~~------   74 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---FPLLKSVVATTDPEE------   74 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---ccccCCceecCCHHH------
Confidence            59999999999999999999854       579999996532  222211221100   011123333333222      


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                       .+.+.|+|||.||.....   ..+.   .+.+..|+    .+++.+.+.+.+..+.     .+.+|.+|.
T Consensus        75 -~l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~----~i~~~i~~~i~~~~~~-----~~iiivvsN  129 (325)
T cd01336          75 -AFKDVDVAILVGAMPRKE---GMER---KDLLKANV----KIFKEQGEALDKYAKK-----NVKVLVVGN  129 (325)
T ss_pred             -HhCCCCEEEEeCCcCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHhCCC-----CeEEEEecC
Confidence             234799999999975331   2222   23455554    4566667777766311     466777765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.62  E-value=0.00033  Score=66.54  Aligned_cols=47  Identities=26%  Similarity=0.367  Sum_probs=42.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      .+++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+.+.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            578999999999 69999999999999999999999988888877665

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.60  E-value=0.00086  Score=73.86  Aligned_cols=179  Identities=14%  Similarity=0.088  Sum_probs=112.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.++.++|++.+++++.+++.+|.++|+.|+++.....    ........+..+..+.+.--+.+++..++..+....+
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhcccc
Confidence            456888999988999999999999999999988753211    0011111122333445555667888888888877788


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH-
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH-  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~-  169 (299)
                      .++.+||..+..... ....+...+...-..-+...|.+.|.+.+.+....       ++.++.++...|..+..+... 
T Consensus      1828 ~~~g~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~-------~~~~~~vsr~~G~~g~~~~~~~ 1899 (2582)
T TIGR02813      1828 QIDGFIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA-------RASFVTVSRIDGGFGYSNGDAD 1899 (2582)
T ss_pred             ccceEEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCC-------CeEEEEEEecCCccccCCcccc
Confidence            999999987744210 00000001111112333446677777665554332       578999998887666533222 


Q ss_pred             -------HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC
Q 022335          170 -------VAAAKAAVDAITRNLALEWGADYDIRVNGIAPG  202 (299)
Q Consensus       170 -------Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG  202 (299)
                             -....+++.+|+|+++.||. ...+|...+.|.
T Consensus      1900 ~~~~~~~~~~~~a~l~Gl~Ktl~~E~P-~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1900 SGTQQVKAELNQAALAGLTKTLNHEWN-AVFCRALDLAPK 1938 (2582)
T ss_pred             ccccccccchhhhhHHHHHHhHHHHCC-CCeEEEEeCCCC
Confidence                   13458999999999999995 445555555554

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.53  E-value=0.0024  Score=56.70  Aligned_cols=80  Identities=26%  Similarity=0.406  Sum_probs=57.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..+++++|+|+++++|.+++..+...|++|+++++++++.+.+    ...+..   ...|..+.+..+.+.+....  .+
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~  235 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KELGAD---YVIDYRKEDFVREVRELTGK--RG  235 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC---eEEecCChHHHHHHHHHhCC--CC
Confidence            3578999999999999999999999999999999988765543    222322   12355565555554443321  36


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++++++|
T Consensus       236 ~d~~i~~~g  244 (342)
T cd08266         236 VDVVVEHVG  244 (342)
T ss_pred             CcEEEECCc
Confidence            999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.51  E-value=0.0011  Score=57.98  Aligned_cols=77  Identities=17%  Similarity=0.117  Sum_probs=56.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+++........+...     +++.+       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHh-------hh
Confidence            467899999998 6799999999999998 6999999999999998888654332333222     11111       12


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      ...|+|||+..
T Consensus       191 ~~aDiVInaTp  201 (284)
T PRK12549        191 AAADGLVHATP  201 (284)
T ss_pred             CCCCEEEECCc
Confidence            36899999954

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.49  E-value=0.00021  Score=59.20  Aligned_cols=48  Identities=21%  Similarity=0.448  Sum_probs=41.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA   57 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~   57 (299)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++.+++++.++...++
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            346889999999996 899999999999999999999998776666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.47  E-value=0.001  Score=58.23  Aligned_cols=42  Identities=24%  Similarity=0.358  Sum_probs=37.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA   53 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~   53 (299)
                      .++|++++|+|. |++|+++++.|...|++|++++|+.+..+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            678999999999 669999999999999999999999865443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.44  E-value=0.0066  Score=53.73  Aligned_cols=112  Identities=13%  Similarity=0.145  Sum_probs=74.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +.+.|+|+ |++|.+++..|+.+|  ..|++++++++..+....++.+.    +....+..   .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------
Confidence            36889996 899999999999999  57999999999888888877553    12222222   12221           


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +...|++|+++|.....   ..+..   +.++.|.    -+++.+.+.+++..+      .+.|+++|.
T Consensus        66 l~~aDIVIitag~~~~~---g~~R~---dll~~N~----~i~~~~~~~i~~~~~------~~~vivvsN  118 (306)
T cd05291          66 CKDADIVVITAGAPQKP---GETRL---DLLEKNA----KIMKSIVPKIKASGF------DGIFLVASN  118 (306)
T ss_pred             hCCCCEEEEccCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHHhCC------CeEEEEecC
Confidence            23789999999964321   22222   2344443    456666777777553      577777764

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.41  E-value=0.0021  Score=56.17  Aligned_cols=81  Identities=16%  Similarity=0.167  Sum_probs=56.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++|.|+ ||-|++++-.|++.|+ +|+++.|+.++.+++.+.+............+.   .+..+..       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~---~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCH---hHHHHHH-------
Confidence            456899999998 8899999999999997 488999999999998887753321111112221   1211111       


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      ...|+|||+..+.
T Consensus       193 ~~~divINaTp~G  205 (283)
T PRK14027        193 AAADGVVNATPMG  205 (283)
T ss_pred             hhcCEEEEcCCCC
Confidence            2579999987643

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.40  E-value=0.0012  Score=57.80  Aligned_cols=79  Identities=15%  Similarity=0.216  Sum_probs=56.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++++++.... .+.  .  +...++...       ..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~--~--~~~~~~~~~-------~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT--R--LEGDSGGLA-------IE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce--e--ccchhhhhh-------cc
Confidence            367899999987 8999999999999997 59999999999888887764321 111  1  111122211       22


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      ...|+|||+....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            4689999998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK06849 hypothetical protein; Provisional

Probab=97.38  E-value=0.0024  Score=58.56  Aligned_cols=82  Identities=18%  Similarity=0.200  Sum_probs=55.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .++|||||++.++|..+++.|.+.|++|++++.++...-.....+    .....++..-.+++...+.+.++.+++ ++|
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id   78 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE-NID   78 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            678999999999999999999999999999998864432221212    123333223334444444444454544 589


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      ++|....
T Consensus        79 ~vIP~~e   85 (389)
T PRK06849         79 LLIPTCE   85 (389)
T ss_pred             EEEECCh
Confidence            9998765

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.37  E-value=0.027  Score=48.33  Aligned_cols=257  Identities=17%  Similarity=0.133  Sum_probs=138.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeCChh------HH-----HHHHHHH-HhcCCcEEEEEcCCCCHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQ------VL-----DAAVSAL-RSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r~~~------~~-----~~~~~~~-~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      .|+|||+|+|+|.|.+.-...+= .|++.+.+.....      ..     .....+. .+.+-=.+.+..|..+.+--+.
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHH
Confidence            57899999999999975444331 4666665543111      01     1112222 3334445678899999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCCC-CC---------------------------------CCCCCHHHHHHHHHhhhHHH
Q 022335           81 VVESTFEHFGKLDILVNAAAGNFL-VS---------------------------------AEDLSPNGFRTVMDIDSVGT  126 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~~-~~---------------------------------~~~~~~~~~~~~~~~n~~~~  126 (299)
                      +++.+.+.+|++|.+|+.-+-... .+                                 ++..+.++++.+..+-=---
T Consensus       121 vIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGeD  200 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGED  200 (398)
T ss_pred             HHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcch
Confidence            999999999999999997532111 00                                 11223333433322110000


Q ss_pred             H-HHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCc
Q 022335          127 F-TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGP  203 (299)
Q Consensus       127 ~-~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~  203 (299)
                      | ..+.+++..       +...++.+-|..|-+....-  ......-+.+|.-|++-+..+...++ ..|=+.++...-.
T Consensus       201 Wq~WidaLl~a-------dvlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa-~~gG~A~vsVlKa  272 (398)
T COG3007         201 WQMWIDALLEA-------DVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLA-ALGGGARVSVLKA  272 (398)
T ss_pred             HHHHHHHHHhc-------cccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHH-hcCCCeeeeehHH
Confidence            1 112222221       12222455565555544332  23456788999999999999999986 5443444332222


Q ss_pred             cCCCCC--CCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCc----hhHHH
Q 022335          204 IGDTPG--MNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLP----KDAVK  277 (299)
Q Consensus       204 v~t~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~----~~~~~  277 (299)
                      +-|...  .+.++  -......+.  ++.-++-|-+.+-+..|.|+.-  -.|+.+.+|..-.+.-.+|..    +...+
T Consensus       273 vVTqASsaIP~~p--lYla~lfkv--MKekg~HEgcIeQi~rlfse~l--y~g~~~~~D~e~rlR~Dd~El~~dvQ~~v~  346 (398)
T COG3007         273 VVTQASSAIPMMP--LYLAILFKV--MKEKGTHEGCIEQIDRLFSEKL--YSGSKIQLDDEGRLRMDDWELRPDVQDQVR  346 (398)
T ss_pred             HHhhhhhcccccc--HHHHHHHHH--HHHcCcchhHHHHHHHHHHHHh--hCCCCCCcCcccccccchhhcCHHHHHHHH
Confidence            222211  11111  111111110  0112455668888888887543  348888888766665555533    34456


Q ss_pred             HHhHhhh
Q 022335          278 QLSRTVE  284 (299)
Q Consensus       278 ~~~~~~~  284 (299)
                      .+|.-++
T Consensus       347 ~lw~qvt  353 (398)
T COG3007         347 ELWDQVT  353 (398)
T ss_pred             HHHHhcC
Confidence            6666543

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.33  E-value=0.0022  Score=57.45  Aligned_cols=82  Identities=23%  Similarity=0.332  Sum_probs=60.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh---------------------hHHHHHHHHHHhcCC--cE
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK---------------------QVLDAAVSALRSLGI--KA   65 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~~--~v   65 (299)
                      ..|++++|+|.|+ ||+|..++..|++.|. ++.++|++.                     .+.+.+++.+.+.+.  ++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            3578899999997 6799999999999998 688898863                     345566677766644  45


Q ss_pred             EEEEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           66 VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        66 ~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..+..|++ .+.+++++       .+.|++|.+..
T Consensus        99 ~~~~~~~~-~~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         99 VPVVTDVT-VEELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence            66677775 34444443       36899888863

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.32  E-value=0.0034  Score=57.00  Aligned_cols=76  Identities=18%  Similarity=0.228  Sum_probs=55.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.+++++|+|+ |.+|+.+++.+...|++|++++++.++++.+...+   +..   +..+..+.+.+.+.+.       .
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l~-------~  230 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAVK-------R  230 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHHc-------c
Confidence            56778999988 78999999999999999999999987766544333   221   2234455555544433       6


Q ss_pred             ccEEEEcCCC
Q 022335           92 LDILVNAAAG  101 (299)
Q Consensus        92 id~lv~~ag~  101 (299)
                      .|++|+++++
T Consensus       231 aDvVI~a~~~  240 (370)
T TIGR00518       231 ADLLIGAVLI  240 (370)
T ss_pred             CCEEEEcccc
Confidence            7999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.31  E-value=0.0014  Score=60.27  Aligned_cols=74  Identities=19%  Similarity=0.197  Sum_probs=54.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+.|++++|.|+ |++|+.++..|+++|. +++++.|+.++.+.+.+++..    ...+     ..++..+       .+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~~~-----~~~~l~~-------~l  240 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----ASAH-----YLSELPQ-------LI  240 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----CeEe-----cHHHHHH-------Hh
Confidence            578999999999 9999999999999996 599999998888777776521    1111     1223222       23


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      ...|+||++.+-
T Consensus       241 ~~aDiVI~aT~a  252 (414)
T PRK13940        241 KKADIIIAAVNV  252 (414)
T ss_pred             ccCCEEEECcCC
Confidence            468999999873

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.30  E-value=0.0076  Score=52.00  Aligned_cols=144  Identities=10%  Similarity=0.188  Sum_probs=82.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCCh-------------------hHHHHHHHHHHhcCCc--EEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRK-------------------QVLDAAVSALRSLGIK--AVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~--v~~~   68 (299)
                      .|++..|+|.|+ ||+|..++..|++.| .++.+++.+.                   .+.+.+.+.+.+.+..  +..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            477888999976 599999999999999 5588887642                   2333445555554433  3333


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAG  148 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~  148 (299)
                      . +.-+++.+.+++.      .++|+||.+....          .           .-..+    ..+..+.        
T Consensus       106 ~-~~i~~e~~~~ll~------~~~D~VIdaiD~~----------~-----------~k~~L----~~~c~~~--------  145 (268)
T PRK15116        106 D-DFITPDNVAEYMS------AGFSYVIDAIDSV----------R-----------PKAAL----IAYCRRN--------  145 (268)
T ss_pred             e-cccChhhHHHHhc------CCCCEEEEcCCCH----------H-----------HHHHH----HHHHHHc--------
Confidence            2 2223444444431      2578777775411          0           00111    1222222        


Q ss_pred             CceEEEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 022335          149 GGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIR  195 (299)
Q Consensus       149 ~g~iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~  195 (299)
                      +-.+|.+++..+.....-.-.-..+|...+.|++.++++|.+.+||+
T Consensus       146 ~ip~I~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        146 KIPLVTTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             CCCEEEECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            23355554444333222223344568888899999999996336774

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.23  E-value=0.015  Score=45.21  Aligned_cols=112  Identities=15%  Similarity=0.230  Sum_probs=74.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG----IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+.|+|++|.+|.+++..|...+.  .+++++++++.++....++.+..    .+..+...|   .++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~---~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD---YEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS---GGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc---ccc-----------c
Confidence            589999999999999999998854  49999999998888888776541    223333322   222           2


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..+|....   ...+..   +.+..|.    .+++.+.+.+.+..+      .+.++.++.
T Consensus        68 ~~aDivvitag~~~~---~g~sR~---~ll~~N~----~i~~~~~~~i~~~~p------~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRK---PGMSRL---DLLEANA----KIVKEIAKKIAKYAP------DAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSS---TTSSHH---HHHHHHH----HHHHHHHHHHHHHST------TSEEEE-SS
T ss_pred             ccccEEEEecccccc---ccccHH---HHHHHhH----hHHHHHHHHHHHhCC------ccEEEEeCC
Confidence            368999999996532   122322   3344444    456666677666653      566666654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.19  E-value=0.016  Score=51.06  Aligned_cols=40  Identities=23%  Similarity=0.394  Sum_probs=35.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL   51 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~   51 (299)
                      .+.+++++|+|. |++|+.++..|...|++|.+++|+.+..
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            467999999997 6799999999999999999999997653

>cd00704 MDH Malate dehydrogenase

Probab=97.19  E-value=0.006  Score=54.30  Aligned_cols=112  Identities=15%  Similarity=0.196  Sum_probs=68.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHH--HH--HHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEH--AK--KVV   82 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~--v~--~~~   82 (299)
                      ++.||||+|.+|..++..|+.+|.       .++++++++  +.++..              ..|+.+...  ..  .+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~--------------~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV--------------VMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee--------------eeehhhhcccccCCcEEe
Confidence            589999999999999999997653       599999987  433333              333333210  00  000


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCCCCCCceEEEecc
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKG-GPGRSSAGGGSILNISA  157 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~~~~~~~~g~iv~vsS  157 (299)
                      ....+.+...|++|+.||.....   ..+..   +.+..|.    .+++.+.+.+.+. ++      .+.+|.+|.
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~---g~tR~---dll~~N~----~i~~~i~~~i~~~~~~------~~iiivvsN  127 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKP---GMERA---DLLRKNA----KIFKEQGEALNKVAKP------TVKVLVVGN  127 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCc---CCcHH---HHHHHhH----HHHHHHHHHHHHhCCC------CeEEEEeCC
Confidence            11223345799999999975321   22322   3344443    5677778888776 23      577777763

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.19  E-value=0.00093  Score=55.45  Aligned_cols=214  Identities=14%  Similarity=0.114  Sum_probs=120.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +..++||||+-|.+|..+|.-|-.+ |-. |++.+-.... +.    .-+   .--++-.|+-|..++++++-.     .
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~----V~~---~GPyIy~DILD~K~L~eIVVn-----~  109 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-AN----VTD---VGPYIYLDILDQKSLEEIVVN-----K  109 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hh----hcc---cCCchhhhhhccccHHHhhcc-----c
Confidence            4668999999999999999987754 655 4444432211 00    101   112345688888887776542     3


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc-cccccc------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA-TLHYTA------  163 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS-~~~~~~------  163 (299)
                      ++|-+||..+....     ..+.......++|+.|..++++.+..+-.             =||+-| +.+..|      
T Consensus       110 RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~~kL-------------~iFVPSTIGAFGPtSPRNP  171 (366)
T KOG2774|consen  110 RIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAKHKL-------------KVFVPSTIGAFGPTSPRNP  171 (366)
T ss_pred             ccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHHcCe-------------eEeecccccccCCCCCCCC
Confidence            89999997653221     11122233568999999999988875522             245533 333322      


Q ss_pred             CC------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEE-eCCccCCCCCC---CCCCchHHhHHHHhc---CCC--
Q 022335          164 SW------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGI-APGPIGDTPGM---NKLAPDEINSKARDY---MPL--  228 (299)
Q Consensus       164 ~~------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i-~pG~v~t~~~~---~~~~~~~~~~~~~~~---~~~--  228 (299)
                      .|      ....|+.||--.+-+.+.+-..+    |+...++ .||.+..+.--   ..+....+.+...+.   .++  
T Consensus       172 TPdltIQRPRTIYGVSKVHAEL~GEy~~hrF----g~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrp  247 (366)
T KOG2774|consen  172 TPDLTIQRPRTIYGVSKVHAELLGEYFNHRF----GVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRP  247 (366)
T ss_pred             CCCeeeecCceeechhHHHHHHHHHHHHhhc----CccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCC
Confidence            22      34679999988877777666544    5777666 47766432111   111111111111110   111  


Q ss_pred             -C--CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCC
Q 022335          229 -Y--KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       229 -~--~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                       .  .+..-+|+-.+++.++...+..+.-.+.++.|
T Consensus       248 dtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  248 DTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             CccCceeehHHHHHHHHHHHhCCHHHhhhheeeece
Confidence             1  13456677776666665555555555666554

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.18  E-value=0.0062  Score=54.06  Aligned_cols=73  Identities=25%  Similarity=0.358  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|++++|+|++ |+|...+......|++|+.+++++++++...+    .+.+..+   |-++++.++.+-+       .+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~----lGAd~~i---~~~~~~~~~~~~~-------~~  230 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK----LGADHVI---NSSDSDALEAVKE-------IA  230 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH----hCCcEEE---EcCCchhhHHhHh-------hC
Confidence            39999999999 99998887766799999999999987655433    3333332   3234444444333       28


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|..++
T Consensus       231 d~ii~tv~  238 (339)
T COG1064         231 DAIIDTVG  238 (339)
T ss_pred             cEEEECCC
Confidence            99999987

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.14  E-value=0.0024  Score=60.01  Aligned_cols=47  Identities=28%  Similarity=0.368  Sum_probs=40.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      .+++++++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            467899999996 79999999999999999999999988777665543

>PRK14968 putative methyltransferase; Provisional

Probab=97.14  E-value=0.014  Score=47.45  Aligned_cols=77  Identities=21%  Similarity=0.224  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK---AVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~---v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++++|-.|++.|.   ++..+++++.+|+.++.++...+...+.+...+.+   +.++.+|+.+.     +    .+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~----~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----F----RG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----c----cc--
Confidence            57889999998776   56666777899999999998877777777654432   88888887542     1    11  


Q ss_pred             CCccEEEEcCCCCC
Q 022335           90 GKLDILVNAAAGNF  103 (299)
Q Consensus        90 g~id~lv~~ag~~~  103 (299)
                      +.+|.++.|.....
T Consensus        89 ~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 DKFDVILFNPPYLP  102 (188)
T ss_pred             cCceEEEECCCcCC
Confidence            26899999987544

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.11  E-value=0.0062  Score=50.48  Aligned_cols=82  Identities=18%  Similarity=0.373  Sum_probs=57.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEE
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR-------------------KQVLDAAVSALRSLGI--KAVG   67 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~v~~   67 (299)
                      ..|++.+|+|.| .||+|..+++.|+..|. ++.++|.+                   ..+.+.+.+.+++.+.  ++..
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            457789999998 56999999999999997 68899876                   3456666777776654  3444


Q ss_pred             EEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           68 FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        68 ~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      +..++.. +.+.+++       .+.|++|.+..
T Consensus        96 ~~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        96 LKERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             ehhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence            5545533 3333333       37899888754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.11  E-value=0.0038  Score=55.63  Aligned_cols=114  Identities=12%  Similarity=0.118  Sum_probs=69.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH--HH--HHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAK--KV--VES   84 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~--~~--~~~   84 (299)
                      ++.|+|++|.+|..++..|+.++.       .++++|++++..            .......|+.+.....  ..  ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            378999999999999999998654       499999865420            0122334444443110  00  001


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCCCCCCceEEEecc
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKG-GPGRSSAGGGSILNISA  157 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~~~~~~~~g~iv~vsS  157 (299)
                      ..+.+...|++|+.||.....   .   +.+.+.+..|+    .+++.+.+.+.+. ++      .+.||.+|.
T Consensus        69 ~~~~~~~aDiVVitAG~~~~~---~---~tr~~ll~~N~----~i~k~i~~~i~~~~~~------~~iiivvsN  126 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRKE---G---MERRDLLSKNV----KIFKEQGRALDKLAKK------DCKVLVVGN  126 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCCC---C---CcHHHHHHHHH----HHHHHHHHHHHhhCCC------CeEEEEeCC
Confidence            123445799999999965321   1   22445566555    4667777777775 22      467777664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.10  E-value=0.034  Score=49.42  Aligned_cols=114  Identities=11%  Similarity=0.124  Sum_probs=76.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .++++.|+|+ |++|..++..|+..|.  .+++++++++.++....++.+..   .++.+..   .+.++          
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~~----------   70 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYSD----------   70 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHHH----------
Confidence            4778999998 9999999999999987  69999999998888888886542   2233222   12111          


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                       +..-|++|..+|.....   ..+..   +.++.|.    .+++.+.+.+.+..+      .+.+++++.
T Consensus        71 -~~~adivIitag~~~k~---g~~R~---dll~~N~----~i~~~i~~~i~~~~~------~~~vivvsN  123 (315)
T PRK00066         71 -CKDADLVVITAGAPQKP---GETRL---DLVEKNL----KIFKSIVGEVMASGF------DGIFLVASN  123 (315)
T ss_pred             -hCCCCEEEEecCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHHhCC------CeEEEEccC
Confidence             23689999999975321   22322   3344444    355555667666543      577777774

>PRK05086 malate dehydrogenase; Provisional

Probab=97.08  E-value=0.0054  Score=54.38  Aligned_cols=106  Identities=9%  Similarity=0.113  Sum_probs=58.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           15 KVALITGGGSGIGFEISTQFGK---HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~---~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.++|+||+|++|.+++..|..   .+..++++++++. .+...-++.+.+....+..++   .+++.+       .+..
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~---~~d~~~-------~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFS---GEDPTP-------ALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeC---CCCHHH-------HcCC
Confidence            3689999999999999998855   2456888888753 222112232211111111111   112111       2236


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGG  141 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~  141 (299)
                      .|+||.++|.....   ..+.   .+.+..|..    +++.+.+.|.+..
T Consensus        70 ~DiVIitaG~~~~~---~~~R---~dll~~N~~----i~~~ii~~i~~~~  109 (312)
T PRK05086         70 ADVVLISAGVARKP---GMDR---SDLFNVNAG----IVKNLVEKVAKTC  109 (312)
T ss_pred             CCEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhC
Confidence            99999999975432   1122   234555554    4555566666654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.06  E-value=0.0034  Score=54.57  Aligned_cols=79  Identities=20%  Similarity=0.352  Sum_probs=57.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +..|+.++|.|+ ||-+++++..|++.|+ +|+++.|+.++.+++.+.+.+.+..+.  ..+..+.+..+          
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~~----------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE--AAALADLEGLE----------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccc--ccccccccccc----------
Confidence            345899999986 5789999999999996 699999999999999998876554222  12222222211          


Q ss_pred             CCccEEEEcCCCCC
Q 022335           90 GKLDILVNAAAGNF  103 (299)
Q Consensus        90 g~id~lv~~ag~~~  103 (299)
                       ..|++||+....-
T Consensus       190 -~~dliINaTp~Gm  202 (283)
T COG0169         190 -EADLLINATPVGM  202 (283)
T ss_pred             -ccCEEEECCCCCC
Confidence             3799999986543

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.04  E-value=0.00081  Score=45.47  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=24.0

Q ss_pred             CC-CEEEEecCCChHHHHHHHHHH-HcCCeEEEEeCCh
Q 022335           13 KG-KVALITGGGSGIGFEISTQFG-KHGASVAIMGRRK   48 (299)
Q Consensus        13 ~~-k~vlItGas~giG~aia~~la-~~G~~Vv~~~r~~   48 (299)
                      +| |+|||+|+|+|.|++-...++ ..|++.+.++...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            45 899999999999999444444 6788998888754

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.04  E-value=0.0035  Score=55.96  Aligned_cols=76  Identities=25%  Similarity=0.416  Sum_probs=51.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC--C
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG--K   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g--~   91 (299)
                      |.++||+||+||+|...+.-..+.|+.++++..++++.+ .   +++.+.+..+   |.++.+    +.+++++..+  +
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~---~~~lGAd~vi---~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-L---LKELGADHVI---NYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-H---HHhcCCCEEE---cCCccc----HHHHHHHHcCCCC
Confidence            899999999999999988877788988777777765544 3   3344433222   223322    4444444432  5


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++...|
T Consensus       212 vDvv~D~vG  220 (326)
T COG0604         212 VDVVLDTVG  220 (326)
T ss_pred             ceEEEECCC
Confidence            999999988

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.01  E-value=0.0097  Score=50.87  Aligned_cols=78  Identities=22%  Similarity=0.371  Sum_probs=52.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..+.+++|+|+++ +|++++..+...|.+|+++++++++.+.+    +..+.. .+  .|..+.+..+.+.   ....+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~--~~~~~~~~~~~~~---~~~~~~  201 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KELGAD-HV--IDYKEEDLEEELR---LTGGGG  201 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHhCCc-ee--ccCCcCCHHHHHH---HhcCCC
Confidence            3588999999999 99999998888999999999987654443    222221 11  2333333333322   222357


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++++++
T Consensus       202 ~d~vi~~~~  210 (271)
T cd05188         202 ADVVIDAVG  210 (271)
T ss_pred             CCEEEECCC
Confidence            999999987

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.00  E-value=0.0065  Score=52.54  Aligned_cols=116  Identities=12%  Similarity=0.164  Sum_probs=72.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcC----CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           17 ALITGGGSGIGFEISTQFGKHG----ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.|+|++|.+|..++..|+..|    ..|+++|.+++.++....++.+.....  ....++..++..+.       +..-
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~-------~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEA-------FKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHH-------hCCC
Confidence            4799998899999999999998    689999999988888877776542211  11122211122222       2368


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      |++|..+|.....   ..+..   ..+..    ..-+.+.+.+.+.+..+      .+.+++++.
T Consensus        72 DiVv~t~~~~~~~---g~~r~---~~~~~----n~~i~~~i~~~i~~~~p------~a~~i~~tN  120 (263)
T cd00650          72 DVVIITAGVGRKP---GMGRL---DLLKR----NVPIVKEIGDNIEKYSP------DAWIIVVSN  120 (263)
T ss_pred             CEEEECCCCCCCc---CCCHH---HHHHH----HHHHHHHHHHHHHHHCC------CeEEEEecC
Confidence            9999999864322   11211   11222    33456666777776653      577777754

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.00  E-value=0.0062  Score=53.99  Aligned_cols=74  Identities=24%  Similarity=0.400  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+.+++|+|+++++|++++..+.+.|++|+.+++++++.+.+    ...+.+ .++  |.   +++.+.   + ....++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~-~~~--~~---~~~~~~---~-~~~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGAD-YVI--DG---SKFSED---V-KKLGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCc-EEE--ec---HHHHHH---H-HhccCC
Confidence            478999999999999999999999999999999887654443    222321 112  21   112222   2 223479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++++++|
T Consensus       228 d~v~~~~g  235 (332)
T cd08259         228 DVVIELVG  235 (332)
T ss_pred             CEEEECCC
Confidence            99999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.00  E-value=0.0063  Score=54.55  Aligned_cols=81  Identities=23%  Similarity=0.345  Sum_probs=57.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh---------------------hHHHHHHHHHHhcCC--cEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK---------------------QVLDAAVSALRSLGI--KAV   66 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~~--~v~   66 (299)
                      .|+..+|+|.|+ ||+|..++..|++.|. ++.++|.+.                     .+.+...+.+++.+.  ++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            577889999999 8999999999999999 699999863                     344555566665543  455


Q ss_pred             EEEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           67 GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        67 ~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      .+..+++ ++.+.+++.       +.|++|.+..
T Consensus       100 ~~~~~~~-~~~~~~~~~-------~~DlVid~~D  125 (339)
T PRK07688        100 AIVQDVT-AEELEELVT-------GVDLIIDATD  125 (339)
T ss_pred             EEeccCC-HHHHHHHHc-------CCCEEEEcCC
Confidence            6666765 334444333       6788888743

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.00  E-value=0.0063  Score=53.28  Aligned_cols=81  Identities=21%  Similarity=0.236  Sum_probs=52.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK---QVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .+++|+++|.|+ ||-+++++-.|+..|+ +|+++.|++   ++.+.+.+.+.... ..+.+..  +.+.+.+.      
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~--~~~~~~l~------  191 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTD--LADQQAFA------  191 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEec--hhhhhhhh------
Confidence            467899999998 5559999999999997 599999984   46777776664321 1122221  11111111      


Q ss_pred             HHHcCCccEEEEcCCC
Q 022335           86 FEHFGKLDILVNAAAG  101 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~  101 (299)
                       +...+.|+|||+..+
T Consensus       192 -~~~~~aDivINaTp~  206 (288)
T PRK12749        192 -EALASADILTNGTKV  206 (288)
T ss_pred             -hhcccCCEEEECCCC
Confidence             122468999998754

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.99  E-value=0.0047  Score=57.21  Aligned_cols=47  Identities=17%  Similarity=0.369  Sum_probs=40.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~   58 (299)
                      .+.+++++|.|+ |.+|+.++..|...|+ +|++++|+.++.+.+.+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            477999999987 9999999999999997 6999999988777666554

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.96  E-value=0.0055  Score=56.63  Aligned_cols=47  Identities=26%  Similarity=0.403  Sum_probs=40.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      .+.+++++|+|+ |.+|..+++.|.+.| .+|++++|+.++.+...+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            477999999997 999999999999999 67999999987766665544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.95  E-value=0.0037  Score=55.94  Aligned_cols=80  Identities=15%  Similarity=0.290  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|++|++|..++..+...|++|+.+++++++.+.+.+.+   +.+ .++  |-.+.++..+.+.....  +++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~-~vi--~~~~~~~~~~~i~~~~~--~gv  222 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFD-DAF--NYKEEPDLDAALKRYFP--NGI  222 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCc-eeE--EcCCcccHHHHHHHhCC--CCc
Confidence            4899999999999999998877788999999898887655554323   322 122  21222233333332221  479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       223 d~v~d~~g  230 (338)
T cd08295         223 DIYFDNVG  230 (338)
T ss_pred             EEEEECCC
Confidence            99999877

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.95  E-value=0.019  Score=51.12  Aligned_cols=153  Identities=12%  Similarity=0.091  Sum_probs=97.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCChhH--HHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRKQV--LDAAVSALRSLG----IKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~~~--~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~   81 (299)
                      +.+.|+|++|.+|..++..|+.+|.       .+++++.+++.  ++....++.+..    .++.+. .  .+       
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~--~~-------   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-D--DP-------   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-c--Cc-------
Confidence            4799999999999999999998876       79999996543  555555554432    112211 1  11       


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc--
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL--  159 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~--  159 (299)
                          .+.+..-|++|..||.... +  ..+..+   .+..|.    -+++.+.+.+.+..+.     .+.||++|.-.  
T Consensus        73 ----~~~~~daDivvitaG~~~k-~--g~tR~d---ll~~N~----~i~~~i~~~i~~~~~~-----~~iiivvsNPvD~  133 (322)
T cd01338          73 ----NVAFKDADWALLVGAKPRG-P--GMERAD---LLKANG----KIFTAQGKALNDVASR-----DVKVLVVGNPCNT  133 (322)
T ss_pred             ----HHHhCCCCEEEEeCCCCCC-C--CCcHHH---HHHHHH----HHHHHHHHHHHhhCCC-----CeEEEEecCcHHH
Confidence                1123468999999997532 1  223222   344444    5677777787776521     46777776411  


Q ss_pred             ------ccc-cCCCchHHHHHHHHHHHHHHHHHHHhcC-CCCeEE
Q 022335          160 ------HYT-ASWYQIHVAAAKAAVDAITRNLALEWGA-DYDIRV  196 (299)
Q Consensus       160 ------~~~-~~~~~~~Y~~sKaal~~l~~~la~e~~~-~~gi~v  196 (299)
                            -.. +.+....|+.++..-..|...+++.++- ...|+.
T Consensus       134 ~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         134 NALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             HHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence                  122 2566678888999989999999988751 234554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.94  E-value=0.0065  Score=55.38  Aligned_cols=81  Identities=19%  Similarity=0.353  Sum_probs=57.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCCc--EEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGIK--AVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~~--v~~~   68 (299)
                      .+++++|+|.|+ ||+|..++..|+..|.. +.+++++                   ..+.+.+.+.+.+.+..  +..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            467888999966 79999999999999985 8889887                   45667777777766543  4444


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ...++. +.+.+++.       +.|+||++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            444442 33333333       6898888864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.90  E-value=0.0022  Score=55.00  Aligned_cols=73  Identities=15%  Similarity=0.192  Sum_probs=54.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++||+||++- |+.++..|.++|++|+...+++...+.+.    ..+  ...+..+..+.+++.+++.+-     ++|+|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g--~~~v~~g~l~~~~l~~~l~~~-----~i~~V   69 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQ--ALTVHTGALDPQELREFLKRH-----SIDIL   69 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccC--CceEEECCCCHHHHHHHHHhc-----CCCEE
Confidence            6999999998 99999999999999999888775433321    111  223445667778877777643     79999


Q ss_pred             EEcCC
Q 022335           96 VNAAA  100 (299)
Q Consensus        96 v~~ag  100 (299)
                      |+.+.
T Consensus        70 IDAtH   74 (256)
T TIGR00715        70 VDATH   74 (256)
T ss_pred             EEcCC
Confidence            99986

This enzyme was found to be a monomer by gel filtration.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.90  E-value=0.02  Score=48.35  Aligned_cols=148  Identities=12%  Similarity=0.163  Sum_probs=84.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|++.+++|.|+ ||+|..+++.|++.|.. ++++|.+.                   .+.+.+++.+.+.+.  ++..+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            466788999986 58999999999999985 77877542                   245555666666554  34444


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAG  148 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~  148 (299)
                      ...++ ++...+++.      .++|++|.+..-             +....        .+.+.+    .+.        
T Consensus        87 ~~~i~-~~~~~~l~~------~~~D~VvdaiD~-------------~~~k~--------~L~~~c----~~~--------  126 (231)
T cd00755          87 EEFLT-PDNSEDLLG------GDPDFVVDAIDS-------------IRAKV--------ALIAYC----RKR--------  126 (231)
T ss_pred             eeecC-HhHHHHHhc------CCCCEEEEcCCC-------------HHHHH--------HHHHHH----HHh--------
Confidence            44444 333333332      358888887531             11111        111222    222        


Q ss_pred             CceEEEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeE--EEEEe
Q 022335          149 GGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIR--VNGIA  200 (299)
Q Consensus       149 ~g~iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~--v~~i~  200 (299)
                      +-.+|...+..+.........-..+|.-.+.|++.+++++. +.||+  +.+|+
T Consensus       127 ~ip~I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lr-k~~~~~~~~~v~  179 (231)
T cd00755         127 KIPVISSMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLR-KRGIFFGVPVVY  179 (231)
T ss_pred             CCCEEEEeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHH-HcCCCCCeEEEe
Confidence            12344444433322211223334567777899999999996 66775  44443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.86  E-value=0.013  Score=46.74  Aligned_cols=152  Identities=13%  Similarity=0.030  Sum_probs=92.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++.+.++|.||+|-.|..+.+++.+.+-  +|+++.|++..-+       ..+..+.....|++..++...-+      
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------at~k~v~q~~vDf~Kl~~~a~~~------   81 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------ATDKVVAQVEVDFSKLSQLATNE------   81 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------cccceeeeEEechHHHHHHHhhh------
Confidence            46788899999999999999999998863  4999998742111       22344555667877666544433      


Q ss_pred             cCCccEEEEcCCCCCCC----CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 FGKLDILVNAAAGNFLV----SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                       .++|+++|+-|.....    .+...+.+.   .        +.+.     .|.+.+-      -.+|+.+||..+...+
T Consensus        82 -qg~dV~FcaLgTTRgkaGadgfykvDhDy---v--------l~~A-----~~AKe~G------ck~fvLvSS~GAd~sS  138 (238)
T KOG4039|consen   82 -QGPDVLFCALGTTRGKAGADGFYKVDHDY---V--------LQLA-----QAAKEKG------CKTFVLVSSAGADPSS  138 (238)
T ss_pred             -cCCceEEEeecccccccccCceEeechHH---H--------HHHH-----HHHHhCC------CeEEEEEeccCCCccc
Confidence             4899999998754321    222222221   1        1122     2222220      2479999998776554


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                      .  ..|--.|.-++.-+.    |+.   ==++.++.||++..+
T Consensus       139 r--FlY~k~KGEvE~~v~----eL~---F~~~~i~RPG~ll~~  172 (238)
T KOG4039|consen  139 R--FLYMKMKGEVERDVI----ELD---FKHIIILRPGPLLGE  172 (238)
T ss_pred             c--eeeeeccchhhhhhh----hcc---ccEEEEecCcceecc
Confidence            3  345556655443332    221   127788999998654

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.85  E-value=0.0059  Score=56.83  Aligned_cols=79  Identities=25%  Similarity=0.273  Sum_probs=55.3

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC
Q 022335           11 ILKGKVALITGG----------------GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR   74 (299)
Q Consensus        11 ~l~~k~vlItGa----------------s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   74 (299)
                      +|+||++|||+|                ||-.|.+||+++..+|++|.++.-...        + .....+.++.  +.+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~-~~p~~v~~i~--V~t  321 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------L-ADPQGVKVIH--VES  321 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------C-CCCCCceEEE--ecC
Confidence            589999999998                488999999999999999999875431        1 0122344443  333


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcCCCCCC
Q 022335           75 QEHAKKVVESTFEHFGKLDILVNAAAGNFL  104 (299)
Q Consensus        75 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~  104 (299)
                         .+++.+.+.+.+. .|++|++|++...
T Consensus       322 ---a~eM~~av~~~~~-~Di~I~aAAVaDy  347 (475)
T PRK13982        322 ---ARQMLAAVEAALP-ADIAIFAAAVADW  347 (475)
T ss_pred             ---HHHHHHHHHhhCC-CCEEEEeccccce
Confidence               4444455545444 7999999987543

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.85  E-value=0.0044  Score=55.86  Aligned_cols=80  Identities=18%  Similarity=0.314  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|++|++|..++..+...|++|+.+++++++.+.+.+++   +.+. ++  |-.+.+++.+.+.+...  +++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~-vi--~~~~~~~~~~~i~~~~~--~gv  229 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDE-AF--NYKEEPDLDAALKRYFP--EGI  229 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCE-EE--ECCCcccHHHHHHHHCC--CCc
Confidence            4889999999999999998877788999999888887655543233   3322 22  22222223333332221  369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       230 D~v~d~vG  237 (348)
T PLN03154        230 DIYFDNVG  237 (348)
T ss_pred             EEEEECCC
Confidence            99999887

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.84  E-value=0.0084  Score=53.20  Aligned_cols=72  Identities=21%  Similarity=0.370  Sum_probs=52.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +.+++++|.|+ |.+|+.+++.|.+.| .+|++++|+.++.+.+.+++   +.  ..+     +.++..+.+.       
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~--~~~-----~~~~~~~~l~-------  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GG--NAV-----PLDELLELLN-------  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CC--eEE-----eHHHHHHHHh-------
Confidence            67999999988 999999999999876 56889999988777766655   22  111     2233333333       


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ..|++|.+.+.
T Consensus       238 ~aDvVi~at~~  248 (311)
T cd05213         238 EADVVISATGA  248 (311)
T ss_pred             cCCEEEECCCC
Confidence            57999999874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.83  E-value=0.025  Score=53.20  Aligned_cols=84  Identities=20%  Similarity=0.204  Sum_probs=58.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCC-------------CHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR-------------RQEH   77 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-------------~~~~   77 (299)
                      ...+.+++|.|+ |.+|...+..+...|++|++++++.++++...    ..+.  .++..|..             +.+.
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~----~lGa--~~v~v~~~e~g~~~~gYa~~~s~~~  233 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ----SMGA--EFLELDFKEEGGSGDGYAKVMSEEF  233 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCC--eEEeccccccccccccceeecCHHH
Confidence            345679999996 89999999999999999999999987654432    2333  33344432             2344


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCC
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~  101 (299)
                      .+...+...++..+.|++|+++-+
T Consensus       234 ~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       234 IAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHHhCCCCEEEECccc
Confidence            444444455556789999999843

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.82  E-value=0.014  Score=49.88  Aligned_cols=82  Identities=15%  Similarity=0.293  Sum_probs=56.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEE
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVG   67 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~   67 (299)
                      ..|++++|+|.|+ ||+|..+++.|+..|.. +.++|.+.                   .+.+.+++.+.+.+.  ++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            3577899999999 99999999999999975 77776532                   345555666666544  4555


Q ss_pred             EEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           68 FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        68 ~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      +...++ ++.+.+++       ..+|++|.+..
T Consensus       107 ~~~~i~-~~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        107 INARLD-DDELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             EeccCC-HHHHHHHH-------hcCCEEEecCC
Confidence            555554 33333333       36898888853

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.82  E-value=0.0079  Score=51.99  Aligned_cols=105  Identities=18%  Similarity=0.253  Sum_probs=69.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Q 022335           14 GKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g~   91 (299)
                      |.+++|++|+|..|.-.. ++++ +|++|+.++-.+++..-+.+++.   .+.   -.|=..+    ++.+.+.+.. .+
T Consensus       151 GetvvVSaAaGaVGsvvg-QiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~---~idyk~~----d~~~~L~~a~P~G  219 (340)
T COG2130         151 GETVVVSAAAGAVGSVVG-QIAKLKGCRVVGIAGGAEKCDFLTEELG---FDA---GIDYKAE----DFAQALKEACPKG  219 (340)
T ss_pred             CCEEEEEecccccchHHH-HHHHhhCCeEEEecCCHHHHHHHHHhcC---Cce---eeecCcc----cHHHHHHHHCCCC
Confidence            999999999999997554 4555 69999999999988877776662   111   1122222    3333344444 47


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      ||+.+-|.|..                          +..+.++.|..         .+||+..+-++.+...
T Consensus       220 IDvyfeNVGg~--------------------------v~DAv~~~ln~---------~aRi~~CG~IS~YN~~  257 (340)
T COG2130         220 IDVYFENVGGE--------------------------VLDAVLPLLNL---------FARIPVCGAISQYNAP  257 (340)
T ss_pred             eEEEEEcCCch--------------------------HHHHHHHhhcc---------ccceeeeeehhhcCCC
Confidence            99999999842                          12233555544         5789988887776543

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.80  E-value=0.0086  Score=53.62  Aligned_cols=78  Identities=12%  Similarity=0.164  Sum_probs=51.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      |.++||+|++|++|.+++..+...|+ +|+.+++++++.+.+.+++   +.+. ++.  -.+ +++.+.+.++..  +++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~-vi~--~~~-~~~~~~i~~~~~--~gv  225 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDA-AIN--YKT-DNVAERLRELCP--EGV  225 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcE-EEE--CCC-CCHHHHHHHHCC--CCc
Confidence            38999999999999998887777898 7999988887665554433   3322 222  122 222222333221  479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       226 d~vid~~g  233 (345)
T cd08293         226 DVYFDNVG  233 (345)
T ss_pred             eEEEECCC
Confidence            99999877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.80  E-value=0.0095  Score=53.03  Aligned_cols=120  Identities=15%  Similarity=0.203  Sum_probs=72.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.+.+.|+|| |.+|..++..++..| +.|++++.+++.++...-++.... ........++...+.+ .       +.
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~-~~~~~~~~i~~~~d~~-~-------l~   72 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS-TLVGSNINILGTNNYE-D-------IK   72 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc-cccCCCeEEEeCCCHH-H-------hC
Confidence            35678999997 889999999999998 789999998876554433333221 1000001111101112 1       23


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .-|++|..+|.....   ..+.   .+.+..|.    -+.+.+.+.|.+..+      .+.+|+++.
T Consensus        73 ~ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p------~a~vivvsN  123 (319)
T PTZ00117         73 DSDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCP------NAFVICVTN  123 (319)
T ss_pred             CCCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCC------CeEEEEecC
Confidence            679999999864321   2222   33455555    467777777777653      566777765

>PLN00203 glutamyl-tRNA reductase

Probab=96.79  E-value=0.0094  Score=56.40  Aligned_cols=47  Identities=13%  Similarity=0.248  Sum_probs=41.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~   58 (299)
                      +|.+++++|.|+ |.+|+.+++.|..+|+ +|+++.|+.++.+.+.+++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            478999999999 9999999999999997 5999999998888877655

>PRK04148 hypothetical protein; Provisional

Probab=96.78  E-value=0.0035  Score=48.02  Aligned_cols=56  Identities=18%  Similarity=0.280  Sum_probs=44.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE   76 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   76 (299)
                      +++.+++.|.+  .|.++|..|++.|++|+++|.++...+...+.      .+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence            46789999998  78888999999999999999999765544332      2677888888754

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.77  E-value=0.0085  Score=52.52  Aligned_cols=79  Identities=27%  Similarity=0.381  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+++++|+|+++++|++++..+...|++|++++++.+..+.+ .+   .+.+.   ..|..+.+..+.+.+ ... .+++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~g~~~---~~~~~~~~~~~~~~~-~~~-~~~~  209 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RA---LGADV---AINYRTEDFAEEVKE-ATG-GRGV  209 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HH---cCCCE---EEeCCchhHHHHHHH-HhC-CCCe
Confidence            588999999999999999999999999999999987665544 22   23221   233333333333222 111 1469


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.+++++|
T Consensus       210 d~vi~~~g  217 (323)
T cd05276         210 DVILDMVG  217 (323)
T ss_pred             EEEEECCc
Confidence            99999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.77  E-value=0.026  Score=53.18  Aligned_cols=84  Identities=21%  Similarity=0.283  Sum_probs=55.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-------------HHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ-------------EHA   78 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-------------~~v   78 (299)
                      ..+.+|+|+|+ |.+|...+..+...|++|+++++++++++..    ++.+.+...+  |..+.             +..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a----eslGA~~v~i--~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV----ESMGAEFLEL--DFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCeEEEe--ccccccccccchhhhcchhHH
Confidence            45889999987 6899999998889999999999998776643    3345443322  22221             212


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCC
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGN  102 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~  102 (299)
                      ++..+.+.+..++.|++|.++|+.
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCC
Confidence            222222233335799999999964

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.75  E-value=0.0079  Score=56.17  Aligned_cols=60  Identities=10%  Similarity=0.277  Sum_probs=45.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .++|.|+ |.+|+.+++.|.++|+.|++++++++..+...+.     ..+.++.+|.++.+.+++.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHHc
Confidence            5888987 9999999999999999999999998876654331     1355666777766554443

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.73  E-value=0.0058  Score=54.36  Aligned_cols=79  Identities=10%  Similarity=0.224  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|++|++|..++..+...|++|+.+++++++.+.+    ++.+.+.. +  |-.+.+...+.+.....  +++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~----~~lGa~~v-i--~~~~~~~~~~~~~~~~~--~gv  208 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL----KKLGFDVA-F--NYKTVKSLEETLKKASP--DGY  208 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCEE-E--eccccccHHHHHHHhCC--CCe
Confidence            488999999999999998887777899999999887765544    23343322 2  22222233333333321  369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       209 dvv~d~~G  216 (325)
T TIGR02825       209 DCYFDNVG  216 (325)
T ss_pred             EEEEECCC
Confidence            99999877

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.71  E-value=0.0082  Score=50.62  Aligned_cols=73  Identities=15%  Similarity=0.355  Sum_probs=56.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH-HHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKV-VESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~-~~~~~~~~g~id~   94 (299)
                      .++|.|+ |.+|..+|+.|.+.|++|++++++++..++..++-    ...+.+.+|-++++-++++ ++       ..|+
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~agi~-------~aD~   69 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAGID-------DADA   69 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcCCC-------cCCE
Confidence            4555554 67999999999999999999999998766633311    2478899999999987776 33       6788


Q ss_pred             EEEcCC
Q 022335           95 LVNAAA  100 (299)
Q Consensus        95 lv~~ag  100 (299)
                      +|...|
T Consensus        70 vva~t~   75 (225)
T COG0569          70 VVAATG   75 (225)
T ss_pred             EEEeeC
Confidence            888876

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.65  E-value=0.0058  Score=48.98  Aligned_cols=39  Identities=18%  Similarity=0.267  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .+|.|++++|+|++.-+|..+++.|.++|++|+++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            368899999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.65  E-value=0.0094  Score=53.60  Aligned_cols=80  Identities=24%  Similarity=0.349  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +|+++||.||++|+|.+.+.-....|+..++++++++..+- .+   ..+.+   ...|-.+++-++.+....   .+++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l-~k---~lGAd---~vvdy~~~~~~e~~kk~~---~~~~  226 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLEL-VK---KLGAD---EVVDYKDENVVELIKKYT---GKGV  226 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHH-HH---HcCCc---EeecCCCHHHHHHHHhhc---CCCc
Confidence            48899999999999999988777778556666655544332 22   23321   223555544333332221   5689


Q ss_pred             cEEEEcCCCC
Q 022335           93 DILVNAAAGN  102 (299)
Q Consensus        93 d~lv~~ag~~  102 (299)
                      |+|+-|.|..
T Consensus       227 DvVlD~vg~~  236 (347)
T KOG1198|consen  227 DVVLDCVGGS  236 (347)
T ss_pred             cEEEECCCCC
Confidence            9999999853

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.64  E-value=0.01  Score=44.17  Aligned_cols=71  Identities=25%  Similarity=0.314  Sum_probs=53.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEE
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV   96 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv   96 (299)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+..    ...+  +.++.+|.++++..+++--      .+.+.+|
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~----~~~~--~~~i~gd~~~~~~l~~a~i------~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL----REEG--VEVIYGDATDPEVLERAGI------EKADAVV   67 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHTT--SEEEES-TTSHHHHHHTTG------GCESEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH----Hhcc--cccccccchhhhHHhhcCc------cccCEEE
Confidence            567777 4799999999999777999999998765554    3333  7789999999999777522      3678888


Q ss_pred             EcCC
Q 022335           97 NAAA  100 (299)
Q Consensus        97 ~~ag  100 (299)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            8765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.64  E-value=0.018  Score=52.04  Aligned_cols=82  Identities=15%  Similarity=0.205  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEE
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVG   67 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~   67 (299)
                      ..|++.+|+|.|+ ||+|..++..|+..|.. +.++|.+.                   .+.+..++.+++.+.  ++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            3577899999998 89999999999999986 77777642                   456677777777654  4555


Q ss_pred             EEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           68 FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        68 ~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      +...++. +...+++.       +.|+||.+..
T Consensus       103 ~~~~i~~-~~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        103 SVRRLTW-SNALDELR-------DADVILDGSD  127 (355)
T ss_pred             EEeecCH-HHHHHHHh-------CCCEEEECCC
Confidence            5556553 33333333       6788888753

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.63  E-value=0.051  Score=45.59  Aligned_cols=42  Identities=19%  Similarity=0.294  Sum_probs=37.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA   57 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~   57 (299)
                      ++.|+||+|.+|.+++..|++.|++|++.+|++++.+.....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            589999999999999999999999999999998887766553

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.61  E-value=0.02  Score=47.86  Aligned_cols=80  Identities=18%  Similarity=0.289  Sum_probs=54.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh------------------hHHHHHHHHHHhcCC--cEEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK------------------QVLDAAVSALRSLGI--KAVGFE   69 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~------------------~~~~~~~~~~~~~~~--~v~~~~   69 (299)
                      .|+..+++|.|+ ||+|..++..|+..|.. +.++|.+.                  .+.+.+.+.+.+.+.  ++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            467889999996 89999999999999987 88888762                  344555555655443  444555


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           70 GDVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        70 ~Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      ..+++ +.+.+++       .++|++|.+.
T Consensus       104 ~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHHHHH-------cCCCEEEECC
Confidence            55543 2333332       3678888774

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.60  E-value=0.017  Score=43.90  Aligned_cols=76  Identities=13%  Similarity=0.187  Sum_probs=55.8

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCeEEE-EeCCh----------------------hHHHHHHHHHHhcCCcEEEEEcC
Q 022335           16 VALITGGGSGIGFEISTQFGK-HGASVAI-MGRRK----------------------QVLDAAVSALRSLGIKAVGFEGD   71 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~-~G~~Vv~-~~r~~----------------------~~~~~~~~~~~~~~~~v~~~~~D   71 (299)
                      +++|.|++|.+|+.+++.+.+ .+..++. ++++.                      +.++++.++     .+   +-.|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            589999999999999999998 6888664 56665                      223333332     11   5679


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEEcCCC
Q 022335           72 VRRQEHAKKVVESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        72 l~~~~~v~~~~~~~~~~~g~id~lv~~ag~  101 (299)
                      +|.++.+.+.++.+.+.  ++.+|+-..|+
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999988887  78889988885

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.53  E-value=0.18  Score=44.93  Aligned_cols=122  Identities=14%  Similarity=0.159  Sum_probs=72.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +.+.+++.|+|+ |.+|..++..++..|. .|++++.+++.++...-++...    +....+...  ++.+         
T Consensus         3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d~~---------   70 (321)
T PTZ00082          3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NNYE---------   70 (321)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CCHH---------
Confidence            345678999995 8899999999999995 8999999987654322222211    112222211  1211         


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                        .+..-|++|..+|........+.+++. .+.+..|+    -+.+.+.+.+.+..+      .+.++++|.
T Consensus        71 --~l~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p------~a~~iv~sN  129 (321)
T PTZ00082         71 --DIAGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCP------NAFVIVITN  129 (321)
T ss_pred             --HhCCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCC------CeEEEEecC
Confidence              123689999999875432211111121 33444453    467777777777653      466777765

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.52  E-value=0.02  Score=50.75  Aligned_cols=78  Identities=13%  Similarity=0.231  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+||++++|.+++......|++|+.+++++++.+.+    ++.+.+. ++  |-.+++..++ +.+...  +++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l----~~~Ga~~-vi--~~~~~~~~~~-v~~~~~--~gv  212 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL----KELGFDA-VF--NYKTVSLEEA-LKEAAP--DGI  212 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE-EE--eCCCccHHHH-HHHHCC--CCc
Confidence            488999999999999998887778899999999888765544    2334322 22  2222222222 222211  469


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       213 d~vld~~g  220 (329)
T cd08294         213 DCYFDNVG  220 (329)
T ss_pred             EEEEECCC
Confidence            99998877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.51  E-value=0.011  Score=51.52  Aligned_cols=37  Identities=27%  Similarity=0.346  Sum_probs=34.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR   47 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~   47 (299)
                      .++||.++|.|+++-.|+.++..|.++|++|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            5789999999999999999999999999998888774

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.49  E-value=0.018  Score=46.64  Aligned_cols=45  Identities=24%  Similarity=0.313  Sum_probs=37.4

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD   52 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~   52 (299)
                      .....+.|+++.|.|. |.||+++|+.|...|++|+..+|.....+
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3455789999999976 89999999999999999999999886543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.47  E-value=0.087  Score=47.37  Aligned_cols=41  Identities=22%  Similarity=0.385  Sum_probs=35.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      .|.+++|.|+ |++|..++..+...|++|+++++++++++..
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4889999999 9999999888888899999999988776543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.39  E-value=0.017  Score=46.11  Aligned_cols=85  Identities=14%  Similarity=0.111  Sum_probs=58.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-------HhcCCcEEEEEcCCCCHHHHHHHHHH--H
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-------RSLGIKAVGFEGDVRRQEHAKKVVES--T   85 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~Dl~~~~~v~~~~~~--~   85 (299)
                      +++-++|. |-+|..+++.|+++|++|++.+|++++.+.+.++-       .+.-.+..++-.-+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            35778887 79999999999999999999999998887765431       11111234455567888999999887  7


Q ss_pred             HHHcCCccEEEEcCC
Q 022335           86 FEHFGKLDILVNAAA  100 (299)
Q Consensus        86 ~~~~g~id~lv~~ag  100 (299)
                      .....+=+++|++..
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            666555566776654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.35  E-value=0.018  Score=58.60  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-Ce-------------EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG-AS-------------VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHA   78 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G-~~-------------Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v   78 (299)
                      +.|.|+|.|+ |.+|+.+++.|++.. +.             |.+++++.+..+++.+..    .++..+.+|+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHH
Confidence            4778999997 999999999998753 22             778888887777665544    2467789999999998


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCC
Q 022335           79 KKVVESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~  101 (299)
                      .++++       .+|+||++...
T Consensus       643 ~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHhhc-------CCCEEEECCCc
Confidence            87766       58999999763

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.35  E-value=0.038  Score=45.68  Aligned_cols=37  Identities=16%  Similarity=0.346  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR   47 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~   47 (299)
                      ..|+.++++|.|+ ||+|..++..|++.|. +++++|.+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3577889999998 7899999999999999 59999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.35  E-value=0.03  Score=45.22  Aligned_cols=31  Identities=19%  Similarity=0.412  Sum_probs=27.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh
Q 022335           17 ALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK   48 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~-Vv~~~r~~   48 (299)
                      ++|.|+ ||+|..++..|++.|.. +.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            778885 89999999999999996 99998865

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.31  E-value=0.047  Score=45.20  Aligned_cols=37  Identities=22%  Similarity=0.283  Sum_probs=33.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      +++||.+||.|| |.+|...++.|.+.|++|+++++..
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            688999999998 8999999999999999999998754

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.31  E-value=0.027  Score=49.86  Aligned_cols=114  Identities=17%  Similarity=0.207  Sum_probs=68.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe--EEEEeCCh--hHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGAS--VAIMGRRK--QVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~--Vv~~~r~~--~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ++.|+|++|.+|..++..|+..|..  |+++++++  +.++....++.+.    +....+   ..+..  .+.       
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i---~~~~d--~~~-------   69 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEI---KISSD--LSD-------   69 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEE---EECCC--HHH-------
Confidence            6899999999999999999999875  99999965  4454444444321    111111   11111  111       


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                       +..-|++|.++|....   .+.+..   +.+..|.    .+++.+.+.+.+..+      .+.||++++-
T Consensus        70 -l~~aDiViitag~p~~---~~~~r~---dl~~~n~----~i~~~~~~~i~~~~~------~~~viv~~np  123 (309)
T cd05294          70 -VAGSDIVIITAGVPRK---EGMSRL---DLAKKNA----KIVKKYAKQIAEFAP------DTKILVVTNP  123 (309)
T ss_pred             -hCCCCEEEEecCCCCC---CCCCHH---HHHHHHH----HHHHHHHHHHHHHCC------CeEEEEeCCc
Confidence             2368999999996432   122322   2334444    345555555555432      5778888763

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.27  E-value=0.05  Score=45.99  Aligned_cols=81  Identities=17%  Similarity=0.381  Sum_probs=57.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|++.+|+|.| .||+|..+++.|+..|.. +.++|.+                   ..+.+.+.+.+++.+.  ++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            56788999998 579999999999999986 6666542                   3356677777777654  45666


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..+++ .+.+.+++.       ++|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            66663 344444433       6899998864

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.27  E-value=0.062  Score=41.31  Aligned_cols=78  Identities=19%  Similarity=0.468  Sum_probs=56.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcC--CcEEEEEcC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLG--IKAVGFEGD   71 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~--~~v~~~~~D   71 (299)
                      +++++|.|+ |++|..+++.|+..|.. +.++|.+                   ..+.+.+.+.+.+..  .++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888875 68999999999999995 8888752                   235677777777664  467777778


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           72 VRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        72 l~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            7 4455555553       6799998854

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.22  E-value=0.019  Score=50.49  Aligned_cols=79  Identities=23%  Similarity=0.303  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|++++|+|+++++|.+++..+...|++|+++.++++..+.. .   ..+.+..   .+....+....+.. ... -.++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~g~~~~---~~~~~~~~~~~~~~-~~~-~~~~  209 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-E---ALGADIA---INYREEDFVEVVKA-ETG-GKGV  209 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCcEE---EecCchhHHHHHHH-HcC-CCCe
Confidence            588999999999999999999889999999999887665432 2   2332211   12223333222222 111 1359


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.+|+++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.20  E-value=0.037  Score=50.54  Aligned_cols=48  Identities=21%  Similarity=0.358  Sum_probs=41.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALR   59 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~   59 (299)
                      +|+++++||+|+ |-+|.-+|++|+++| .+|+++.|+.++.+++++++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            488999999998 468999999999999 558899999999998888773

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.20  E-value=0.032  Score=49.48  Aligned_cols=79  Identities=14%  Similarity=0.243  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+.+++|.|+++++|.+++..+.+.|++|+.+++++++.+.+.+.+   +.+ .++  |..+.+..+.+.+ ...  +++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~~--~~~~~~~~~~v~~-~~~--~~~  215 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AAI--NYKTPDLAEALKE-AAP--DGI  215 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eEE--ecCChhHHHHHHH-hcc--CCc
Confidence            4789999999999999999988899999999998887655443322   221 222  2223332222222 221  479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++++.|
T Consensus       216 d~vi~~~g  223 (329)
T cd05288         216 DVYFDNVG  223 (329)
T ss_pred             eEEEEcch
Confidence            99999877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.18  E-value=0.042  Score=51.82  Aligned_cols=78  Identities=19%  Similarity=0.153  Sum_probs=53.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|.|+ |++|.++|+.|.++|++|+++++++. ......+.+.+.+  +.++..+-..             ..
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g--v~~~~~~~~~-------------~~   76 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG--ATVRLGPGPT-------------LP   76 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC--CEEEECCCcc-------------cc
Confidence            567899999997 77999999999999999999986543 3334445565555  3333322111             01


Q ss_pred             CCccEEEEcCCCCCC
Q 022335           90 GKLDILVNAAAGNFL  104 (299)
Q Consensus        90 g~id~lv~~ag~~~~  104 (299)
                      ...|.||...|+...
T Consensus        77 ~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         77 EDTDLVVTSPGWRPD   91 (480)
T ss_pred             CCCCEEEECCCcCCC
Confidence            358999999997543

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.17  E-value=0.26  Score=43.63  Aligned_cols=112  Identities=13%  Similarity=0.152  Sum_probs=73.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           17 ALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG-----IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +.|+|+ |.+|..+|..|+.++.  .+++++.+++.++....++.+..     .++.+...|   .+           .+
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~---y~-----------~~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD---YD-----------DC   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC---HH-----------Hh
Confidence            678998 9999999999998875  49999999988888777776532     134444322   11           12


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..||.... +  ..+.+. .+.++.|    ..+++.+.+.+.+..+      .+.++.+|.
T Consensus        67 ~~aDivvitaG~~~k-p--g~tr~R-~dll~~N----~~I~~~i~~~i~~~~p------~~i~ivvsN  120 (307)
T cd05290          67 ADADIIVITAGPSID-P--GNTDDR-LDLAQTN----AKIIREIMGNITKVTK------EAVIILITN  120 (307)
T ss_pred             CCCCEEEECCCCCCC-C--CCCchH-HHHHHHH----HHHHHHHHHHHHHhCC------CeEEEEecC
Confidence            368999999997432 1  122100 1234444    3577778888887763      566666655

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.17  E-value=0.064  Score=47.51  Aligned_cols=116  Identities=13%  Similarity=0.141  Sum_probs=69.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++.|+|++|.+|..+|..|+.++.  .++++|.++  .+...-++.+......+..+.  ..++.       .+.+..-|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~~-------~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEGL-------ENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCch-------HHHcCCCC
Confidence            378999999999999999998875  599999877  233333333322111211100  00111       12234789


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                      ++|..+|.... +  ..+.   .+.+..|..    +++.+.+.+.+..+      .+.||++|.-
T Consensus        70 ivvitaG~~~~-~--g~~R---~dll~~N~~----I~~~i~~~i~~~~p------~~iiivvsNP  118 (312)
T TIGR01772        70 VVVIPAGVPRK-P--GMTR---DDLFNVNAG----IVKDLVAAVAESCP------KAMILVITNP  118 (312)
T ss_pred             EEEEeCCCCCC-C--CccH---HHHHHHhHH----HHHHHHHHHHHhCC------CeEEEEecCc
Confidence            99999996432 1  2222   234555555    67777777777653      5777777663

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.16  E-value=0.044  Score=49.17  Aligned_cols=75  Identities=19%  Similarity=0.304  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|++++|+|+ |++|...+..+...|+ +|+++++++++++..    ++.+.+.. +  |..+ +++.++    .+..+.
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a----~~lGa~~v-i--~~~~-~~~~~~----~~~~g~  235 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA----REMGADKL-V--NPQN-DDLDHY----KAEKGY  235 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH----HHcCCcEE-e--cCCc-ccHHHH----hccCCC
Confidence            5889999986 8999999887777898 588889888765543    23343322 2  3222 223222    222356


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.++|
T Consensus       236 ~D~vid~~G  244 (343)
T PRK09880        236 FDVSFEVSG  244 (343)
T ss_pred             CCEEEECCC
Confidence            999999988

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.10  E-value=0.031  Score=46.86  Aligned_cols=74  Identities=23%  Similarity=0.259  Sum_probs=54.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.|+++|=.||++|   -++..+|+.|++|..+|-+++..+.......+.+..+.+.          ...++++.+..+.
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~----------~~~~edl~~~~~~  124 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYR----------QATVEDLASAGGQ  124 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccch----------hhhHHHHHhcCCC
Confidence            67999999999999   6899999999999999999887777665554444332222          2223444444478


Q ss_pred             ccEEEEc
Q 022335           92 LDILVNA   98 (299)
Q Consensus        92 id~lv~~   98 (299)
                      +|+|+|+
T Consensus       125 FDvV~cm  131 (243)
T COG2227         125 FDVVTCM  131 (243)
T ss_pred             ccEEEEh
Confidence            9999987

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.08  E-value=0.1  Score=46.09  Aligned_cols=111  Identities=16%  Similarity=0.193  Sum_probs=72.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCc---EEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           17 ALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIK---AVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~---v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.|.|+ |++|..++..|+..|  ..+++++.+++.++....++.+....   ..+..+  .+.+           .+..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-----------~l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-----------DAAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-----------HhCC
Confidence            357887 679999999999988  67999999999888888888665321   222221  1111           1236


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      -|++|.++|.....   ..+..   +.+..|    .-+++.+.+.+++..+      .+.|++++.
T Consensus        67 aDiVIitag~p~~~---~~~R~---~l~~~n----~~i~~~~~~~i~~~~p------~~~viv~sN  116 (300)
T cd00300          67 ADIVVITAGAPRKP---GETRL---DLINRN----APILRSVITNLKKYGP------DAIILVVSN  116 (300)
T ss_pred             CCEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHHHhCC------CeEEEEccC
Confidence            89999999965321   22222   223333    3466667777776653      577777774

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.08  E-value=0.039  Score=45.48  Aligned_cols=79  Identities=23%  Similarity=0.407  Sum_probs=52.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCCc--EEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGIK--AVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~~--v~~~   68 (299)
                      .|++.+|+|.|++ |+|..+++.|+..|.. +.++|.+                   ..+.+.+++.+++.+..  +..+
T Consensus        18 ~L~~s~VlIiG~g-glG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGLK-GLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcCC-HHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            4678889999865 5999999999999987 7777753                   22455666667766544  4445


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      ...+++  ...++       +.++|++|.+.
T Consensus        97 ~~~~~~--~~~~~-------~~~~dvVi~~~  118 (197)
T cd01492          97 TDDISE--KPEEF-------FSQFDVVVATE  118 (197)
T ss_pred             ecCccc--cHHHH-------HhCCCEEEECC
Confidence            544441  12222       23689888774

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.07  E-value=0.04  Score=51.46  Aligned_cols=78  Identities=21%  Similarity=0.286  Sum_probs=60.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +..+.++|.|+ |.+|+.+++.|.++|.+|++++++++..+.+.++    ...+.++..|.++++.+++.-      ..+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~~  297 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------IDE  297 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Ccc
Confidence            45788999999 9999999999999999999999998766654443    234677899999988765532      236


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      .|.+|....
T Consensus       298 a~~vi~~~~  306 (453)
T PRK09496        298 ADAFIALTN  306 (453)
T ss_pred             CCEEEECCC
Confidence            788876654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.06  E-value=0.064  Score=41.66  Aligned_cols=76  Identities=17%  Similarity=0.342  Sum_probs=51.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEEEcCCC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGI--KAVGFEGDVR   73 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~v~~~~~Dl~   73 (299)
                      +++|.|+ ||+|..+++.|+..|.. +.++|.+                   ..+.+.+++.+++.+.  ++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3788887 89999999999999984 8888754                   2345556666666543  4555555554


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      +...        .+.+.+.|++|.+..
T Consensus        80 ~~~~--------~~~~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL--------DDFLDGVDLVIDAID   98 (143)
T ss_pred             hhhH--------HHHhcCCCEEEECCC
Confidence            3322        222347888888864

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.03  E-value=0.052  Score=50.67  Aligned_cols=77  Identities=22%  Similarity=0.295  Sum_probs=51.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.+|+++|+|.+ ++|.++|+.|+++|++|++.+.+...  ...+++......+.++..... ..    ..       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~~~gi~~~~g~~~-~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKMFDGLVFYTGRLK-DA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhccCCcEEEeCCCC-HH----HH-------hC
Confidence            568999999986 99999999999999999999876542  112234332123444433322 11    11       26


Q ss_pred             ccEEEEcCCCCC
Q 022335           92 LDILVNAAAGNF  103 (299)
Q Consensus        92 id~lv~~ag~~~  103 (299)
                      .|.||...|+..
T Consensus        68 ~d~vv~spgi~~   79 (445)
T PRK04308         68 FDILALSPGISE   79 (445)
T ss_pred             CCEEEECCCCCC
Confidence            899999999864

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.03  E-value=0.072  Score=45.39  Aligned_cols=37  Identities=24%  Similarity=0.418  Sum_probs=30.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR   47 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~   47 (299)
                      ..|++.+|+|.|+ ||+|..++..|+..|.. ++++|.+
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3577888999976 59999999999999976 7777764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.00  E-value=0.041  Score=48.36  Aligned_cols=79  Identities=22%  Similarity=0.263  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++++++|+|+++++|++++..+...|++|+.++++.++.+.+ .   ..+.+ .++..+  ..+..+.+.+ ... ..++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~-~~~~~~--~~~~~~~~~~-~~~-~~~~  214 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-L---ALGAA-HVIVTD--EEDLVAEVLR-ITG-GKGV  214 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-H---HcCCC-EEEecC--CccHHHHHHH-HhC-CCCc
Confidence            578999999999999999999999999999999887665544 2   22321 222222  2222222222 111 1269


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.+++++|
T Consensus       215 d~vi~~~~  222 (328)
T cd08268         215 DVVFDPVG  222 (328)
T ss_pred             eEEEECCc
Confidence            99999887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.99  E-value=0.028  Score=45.68  Aligned_cols=44  Identities=20%  Similarity=0.385  Sum_probs=36.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS   60 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~   60 (299)
                      +|.|.|+ |.+|..+|..++..|++|++++++++.++...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778888 9999999999999999999999999988777666643

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK08223 hypothetical protein; Validated

Probab=95.99  E-value=0.045  Score=47.64  Aligned_cols=36  Identities=19%  Similarity=0.204  Sum_probs=30.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR   47 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~   47 (299)
                      .|++.+|+|.|+ ||+|..++..|+..|.. +.++|.+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            467888999987 58999999999999987 7777764

>PLN02928 oxidoreductase family protein

Probab=95.98  E-value=0.022  Score=51.31  Aligned_cols=38  Identities=29%  Similarity=0.439  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ..|.||++.|.|. |.||+++|+.|...|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4688999999998 8999999999999999999999874

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.95  E-value=0.38  Score=44.68  Aligned_cols=113  Identities=14%  Similarity=0.092  Sum_probs=75.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-------CC--eEEEEeCChhHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKH-------GA--SVAIMGRRKQVLDAAVSALRSLG----IKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~-------G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~   81 (299)
                      -+|.|+|++|.+|.+++-.|+..       |.  .+++++++++.++...-++.+..    .++.+ ..|  +.++    
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~~--~ye~----  173 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GID--PYEV----  173 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ecC--CHHH----
Confidence            46999999999999999999987       55  58999999999998888886542    12221 111  2222    


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCCCCCCCCceEEEecc
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKK-GGPGRSSAGGGSILNISA  157 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~-~~~~~~~~~~g~iv~vsS  157 (299)
                             +..-|++|..+|.... +  ..+..   +.++.|.    .+++.+.+.+.+ ..+      .+.||.+|.
T Consensus       174 -------~kdaDiVVitAG~prk-p--G~tR~---dLl~~N~----~I~k~i~~~I~~~a~p------~~ivIVVsN  227 (444)
T PLN00112        174 -------FQDAEWALLIGAKPRG-P--GMERA---DLLDING----QIFAEQGKALNEVASR------NVKVIVVGN  227 (444)
T ss_pred             -------hCcCCEEEECCCCCCC-C--CCCHH---HHHHHHH----HHHHHHHHHHHHhcCC------CeEEEEcCC
Confidence                   3468999999996432 1  22332   3445454    466667777777 332      577777774

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.94  E-value=0.44  Score=42.31  Aligned_cols=114  Identities=11%  Similarity=0.104  Sum_probs=74.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ...+.|+|+ |.+|..++..|+..|.  .+++++.+++.++....++.+..   ....+...  .+.++           
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence            347899996 9999999999998765  49999999888888777776542   11122221  12211           


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +...|++|..+|....   ...+..+   .+..|.    -+++.+.+.+.+..+      .+.++++|.
T Consensus        69 ~~~adivvitaG~~~k---~g~~R~d---ll~~N~----~i~~~~~~~i~~~~p------~~~vivvsN  121 (312)
T cd05293          69 TANSKVVIVTAGARQN---EGESRLD---LVQRNV----DIFKGIIPKLVKYSP------NAILLVVSN  121 (312)
T ss_pred             hCCCCEEEECCCCCCC---CCCCHHH---HHHHHH----HHHHHHHHHHHHhCC------CcEEEEccC
Confidence            2368999999996532   1233322   344443    456777777777653      577888775

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.92  E-value=0.017  Score=48.71  Aligned_cols=36  Identities=17%  Similarity=0.347  Sum_probs=33.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe---EEEEeCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS---VAIMGRR   47 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~---Vv~~~r~   47 (299)
                      .+++++++|.|+ |+.|++++..|.+.|.+   +++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            578999999999 89999999999999985   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.92  E-value=0.072  Score=48.42  Aligned_cols=80  Identities=14%  Similarity=0.375  Sum_probs=54.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR-------------------KQVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|++.+|+|.|+ ||+|..++..|+..|. ++.++|.+                   ..+.+.+.+.+.+.+.  ++..+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            467888999987 5999999999999997 58888875                   3355666667766654  45555


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      ...++ ++.+.+++.       ++|+||.+.
T Consensus       117 ~~~i~-~~~~~~~~~-------~~DlVid~~  139 (370)
T PRK05600        117 RERLT-AENAVELLN-------GVDLVLDGS  139 (370)
T ss_pred             eeecC-HHHHHHHHh-------CCCEEEECC
Confidence            55554 333333333       567777664

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=95.92  E-value=0.17  Score=40.93  Aligned_cols=79  Identities=24%  Similarity=0.225  Sum_probs=61.8

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..++.|++|+=.||+.|+   ++...+-.|+ .|++++.+++.++-..+...+..+++.++.+|+++..           
T Consensus        41 ~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~-----------  106 (198)
T COG2263          41 RGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR-----------  106 (198)
T ss_pred             cCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC-----------
Confidence            357889999999998774   3333344564 4999999999999888888877889999999988654           


Q ss_pred             HcCCccEEEEcCCCCC
Q 022335           88 HFGKLDILVNAAAGNF  103 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~  103 (299)
                        +++|.+|-|..+..
T Consensus       107 --~~~dtvimNPPFG~  120 (198)
T COG2263         107 --GKFDTVIMNPPFGS  120 (198)
T ss_pred             --CccceEEECCCCcc
Confidence              48899999986543

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.83  E-value=0.09  Score=43.40  Aligned_cols=36  Identities=31%  Similarity=0.543  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR   47 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~   47 (299)
                      .|++.+|+|.|+++ +|..+++.|+..|.. +.++|.+
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            46678899998876 999999999999988 7777754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.80  E-value=0.024  Score=44.17  Aligned_cols=42  Identities=19%  Similarity=0.329  Sum_probs=35.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS   60 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~   60 (299)
                      |+++|+.+-+|++||..|.++|.+|+++  +.+.-+.+..++..
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5789999999999999999999999999  66666777766643

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.80  E-value=0.26  Score=43.68  Aligned_cols=116  Identities=16%  Similarity=0.145  Sum_probs=69.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++.|+|++|.+|.++|..|+.++.  .+++++.+  .++...-++.+......+..+.  ..+++       .+.+..-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~-------y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEEL-------KKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCch-------HHhcCCCC
Confidence            589999999999999999998884  59999988  4455445554432112222110  11111       12234789


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                      ++|..||.... +  ..+..   +.++.|..    +++.+.+.+.+..+      .+.||++|.-
T Consensus        71 ivvitaG~~~k-~--g~tR~---dll~~N~~----i~~~i~~~i~~~~p------~a~vivvtNP  119 (310)
T cd01337          71 VVVIPAGVPRK-P--GMTRD---DLFNINAG----IVRDLATAVAKACP------KALILIISNP  119 (310)
T ss_pred             EEEEeCCCCCC-C--CCCHH---HHHHHHHH----HHHHHHHHHHHhCC------CeEEEEccCc
Confidence            99999997432 1  22322   34555554    45555666665543      5777777663

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.79  E-value=0.099  Score=47.44  Aligned_cols=78  Identities=15%  Similarity=0.268  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ +++|..++..+...|+ +|+.+++++++++..    ++.+.+.. +  |..+ .+++.+.+.++..  +
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a----~~~Ga~~~-i--~~~~~~~~~~~~v~~~~~--~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA----KKLGATDC-V--NPNDYDKPIQEVIVEITD--G  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCCeE-E--cccccchhHHHHHHHHhC--C
Confidence            4889999985 8999999887777898 698898888765544    22343221 2  3232 2233333333322  3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus       255 g~d~vid~~G  264 (368)
T TIGR02818       255 GVDYSFECIG  264 (368)
T ss_pred             CCCEEEECCC
Confidence            7999999988

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.77  E-value=0.058  Score=48.12  Aligned_cols=85  Identities=20%  Similarity=0.265  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||.|+++++|.+++..+...|++|+++.++.+..++..+.++..+.+..+...+.+ ..+..+.+.....  +++
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~--~~~  222 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATELLKSAPG--GRP  222 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHHHHHHcC--CCc
Confidence            5899999999999999999988899999988887664323333334344433222211110 0122222222211  269


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.++.+.|
T Consensus       223 d~vld~~g  230 (341)
T cd08290         223 KLALNCVG  230 (341)
T ss_pred             eEEEECcC
Confidence            99999877

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.77  E-value=0.077  Score=46.92  Aligned_cols=76  Identities=22%  Similarity=0.407  Sum_probs=49.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcC--CcEEEEEcCCC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLG--IKAVGFEGDVR   73 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~--~~v~~~~~Dl~   73 (299)
                      +|+|.|+ ||+|..+++.|+..|.. +.++|.+                   ..+.+.+++.+++.+  .++..+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            3788886 89999999999999987 7777753                   234555566666554  34555666666


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      +.+...+++       ..+|+||++.
T Consensus        80 ~~~~~~~f~-------~~~DvVv~a~   98 (312)
T cd01489          80 DPDFNVEFF-------KQFDLVFNAL   98 (312)
T ss_pred             CccchHHHH-------hcCCEEEECC
Confidence            532222232       3677777764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.75  E-value=0.052  Score=50.03  Aligned_cols=40  Identities=20%  Similarity=0.329  Sum_probs=35.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL   51 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~   51 (299)
                      .+.|++++|+|. |.||+.++..|...|++|+++++++.+.
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            367999999997 6899999999999999999999987653

>PRK14967 putative methyltransferase; Provisional

Probab=95.75  E-value=0.33  Score=40.79  Aligned_cols=75  Identities=25%  Similarity=0.297  Sum_probs=53.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.++|-.|++.|.   ++..+++.|. +|+.++.++..++...+.+...+.++.++..|+.+.      +.     .+.+
T Consensus        37 ~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~~f  102 (223)
T PRK14967         37 GRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FRPF  102 (223)
T ss_pred             CCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CCCe
Confidence            6789999997754   3444556666 899999999887777666655555677888786531      11     1479


Q ss_pred             cEEEEcCCCC
Q 022335           93 DILVNAAAGN  102 (299)
Q Consensus        93 d~lv~~ag~~  102 (299)
                      |.+|.|..+.
T Consensus       103 D~Vi~npPy~  112 (223)
T PRK14967        103 DVVVSNPPYV  112 (223)
T ss_pred             eEEEECCCCC
Confidence            9999998654

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.75  E-value=0.064  Score=37.76  Aligned_cols=36  Identities=28%  Similarity=0.512  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGR   46 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r   46 (299)
                      ..+++++++|.|+ |+.|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3477999999999 99999999999998 566878877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.74  E-value=0.18  Score=41.53  Aligned_cols=71  Identities=25%  Similarity=0.284  Sum_probs=48.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhc-----------CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSL-----------GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~-----------~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      ...+||+|.||.++++.|++.|+.|++.+|+. +.++...+.+...           ..++.++..-.   +.+..++.+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence            46678899999999999999999999986655 4455555544211           24566666554   445556666


Q ss_pred             HHHHcC
Q 022335           85 TFEHFG   90 (299)
Q Consensus        85 ~~~~~g   90 (299)
                      +.+.++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            666664

>PRK08328 hypothetical protein; Provisional

Probab=95.74  E-value=0.14  Score=43.35  Aligned_cols=37  Identities=19%  Similarity=0.405  Sum_probs=31.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK   48 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~   48 (299)
                      .|++.+|+|.|++ |+|.+++..|+..|.. +.++|.+.
T Consensus        24 ~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            4678889999874 8999999999999986 77887653

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.71  E-value=0.057  Score=48.06  Aligned_cols=42  Identities=24%  Similarity=0.265  Sum_probs=36.9

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      +...+++||++-|.| .|.||+++|+.+...|++|+..+|++.
T Consensus       139 ~~~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         139 LLGFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             ccccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            445679999999998 478999999999999999999999874

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.71  E-value=0.022  Score=43.40  Aligned_cols=85  Identities=14%  Similarity=0.135  Sum_probs=51.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhc----------CCcEEEEEcCCCCHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSL----------GIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~----------~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      ..++-|+|+ |.+|.++++.|.+.|+.|+.+ +|+....+.....+...          ..++.++.+  . ++.+..++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iav--p-DdaI~~va   85 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAV--P-DDAIAEVA   85 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S----CCHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEe--c-hHHHHHHH
Confidence            457889998 889999999999999998876 46655555555544211          123444432  2 23777777


Q ss_pred             HHHHHH--cCCccEEEEcCCCC
Q 022335           83 ESTFEH--FGKLDILVNAAAGN  102 (299)
Q Consensus        83 ~~~~~~--~g~id~lv~~ag~~  102 (299)
                      +++...  +.+=.+|||+.|-.
T Consensus        86 ~~La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   86 EQLAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHHHCC--S-TT-EEEES-SS-
T ss_pred             HHHHHhccCCCCcEEEECCCCC
Confidence            777665  33346899999843

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.70  E-value=0.086  Score=47.15  Aligned_cols=64  Identities=11%  Similarity=0.159  Sum_probs=45.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH---HHHHhc--CCcEEEEEcCCCC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAV---SALRSL--GIKAVGFEGDVRR   74 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~---~~~~~~--~~~v~~~~~Dl~~   74 (299)
                      ..|.|+++.|.|. |.||+++|+.|...|++|++.++++.......   ..+.+.  ..++.++.+-.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            4689999999986 67999999999999999999999875432211   112211  3456666666554

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.70  E-value=0.12  Score=46.86  Aligned_cols=78  Identities=13%  Similarity=0.247  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ-EHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~~~~~~g   90 (299)
                      .|.++||.|+ +++|..++..+...|+ +|+.+++++++++.+    ++.+.+. ++  |..+. +++.+.+.++..  +
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~----~~lGa~~-~i--~~~~~~~~~~~~v~~~~~--~  255 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA----KKFGATD-CV--NPKDHDKPIQQVLVEMTD--G  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHcCCCE-EE--cccccchHHHHHHHHHhC--C
Confidence            4899999985 8999999998888999 688899988776543    2234322 22  33332 234444444332  4


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus       256 g~d~vid~~g  265 (368)
T cd08300         256 GVDYTFECIG  265 (368)
T ss_pred             CCcEEEECCC
Confidence            7999999987

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.68  E-value=0.059  Score=47.61  Aligned_cols=79  Identities=14%  Similarity=0.194  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+++|.|+++++|.+++....+.|++|+.+.++.++.+.+.+    .+.+ .++.  -.+.+. .+.+..... -.++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~g~~-~~~~--~~~~~~-~~~i~~~~~-~~~~  209 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA----LGIG-PVVS--TEQPGW-QDKVREAAG-GAPI  209 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh----cCCC-EEEc--CCCchH-HHHHHHHhC-CCCC
Confidence            48899999999999999999888899999999888776555432    2322 2222  222222 222222211 1269


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       210 d~v~d~~g  217 (324)
T cd08292         210 SVALDSVG  217 (324)
T ss_pred             cEEEECCC
Confidence            99999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02740 Alcohol dehydrogenase-like

Probab=95.67  E-value=0.096  Score=47.79  Aligned_cols=78  Identities=14%  Similarity=0.259  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ-EHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~~~~~~g   90 (299)
                      .|.++||.|+ |++|..++..+...|+ +|+.+++++++++..    ++.+.+. ++  |..+. +++.+.+.++..  +
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a----~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG----KEMGITD-FI--NPKDSDKPVHERIREMTG--G  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH----HHcCCcE-EE--ecccccchHHHHHHHHhC--C
Confidence            4889999986 8999999988888899 588899988765554    2234322 22  32222 123333333322  2


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus       268 g~dvvid~~G  277 (381)
T PLN02740        268 GVDYSFECAG  277 (381)
T ss_pred             CCCEEEECCC
Confidence            6999999988

>PLN02602 lactate dehydrogenase

Probab=95.67  E-value=0.72  Score=41.59  Aligned_cols=113  Identities=12%  Similarity=0.149  Sum_probs=73.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +.+.|+|+ |.+|..++..|+..+.  .+++++.+++.++....++.+..   ....+.. + .+.++           +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~-~dy~~-----------~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-S-TDYAV-----------T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-C-CCHHH-----------h
Confidence            68999996 9999999999998765  49999999988888777776542   1222221 1 12111           2


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..||.....   ..+..   +.+..|    ..+++.+.+.+.+..+      .+.+|+++.
T Consensus       104 ~daDiVVitAG~~~k~---g~tR~---dll~~N----~~I~~~i~~~I~~~~p------~~ivivvtN  155 (350)
T PLN02602        104 AGSDLCIVTAGARQIP---GESRL---NLLQRN----VALFRKIIPELAKYSP------DTILLIVSN  155 (350)
T ss_pred             CCCCEEEECCCCCCCc---CCCHH---HHHHHH----HHHHHHHHHHHHHHCC------CeEEEEecC
Confidence            3689999999975321   22332   233333    3466677777776543      577777774

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.66  E-value=0.51  Score=38.02  Aligned_cols=76  Identities=14%  Similarity=0.167  Sum_probs=57.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .+++++|=.|++.|.   ++..+++++.+|+.++.+++.++...+.+...+.++.++.+|+.+..            .+.
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~~   82 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RGK   82 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CCc
Confidence            456789999988774   45566777778999999999888887777766667888888976421            147


Q ss_pred             ccEEEEcCCCC
Q 022335           92 LDILVNAAAGN  102 (299)
Q Consensus        92 id~lv~~ag~~  102 (299)
                      +|.++.|....
T Consensus        83 fD~Vi~n~p~~   93 (179)
T TIGR00537        83 FDVILFNPPYL   93 (179)
T ss_pred             ccEEEECCCCC
Confidence            89999997654

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.66  E-value=0.035  Score=43.05  Aligned_cols=38  Identities=24%  Similarity=0.365  Sum_probs=35.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      +++||.++|.|-+.-+|+.++..|.++|++|..+.++.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            67899999999999999999999999999999988654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.66  E-value=0.12  Score=45.76  Aligned_cols=92  Identities=15%  Similarity=0.214  Sum_probs=57.7

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH------HHHhc--CCcEEEEEcCCCCHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVS------ALRSL--GIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~------~~~~~--~~~v~~~~~Dl~~~~~v~   79 (299)
                      +...|+||++.|+|- |.+|+++|+.|...|++|++..|.....+....      .+.+.  ..++..+.+-  +++. +
T Consensus        10 ~~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~   85 (335)
T PRK13403         10 NVELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-A   85 (335)
T ss_pred             ChhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-H
Confidence            445789999999987 789999999999999999888765322111111      12211  2345444443  3444 4


Q ss_pred             HHH-HHHHHHcCCccEEEEcCCCCC
Q 022335           80 KVV-ESTFEHFGKLDILVNAAAGNF  103 (299)
Q Consensus        80 ~~~-~~~~~~~g~id~lv~~ag~~~  103 (299)
                      .++ +++.....+=.+|++..|++-
T Consensus        86 ~V~~~eil~~MK~GaiL~f~hgfni  110 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLFSHGFNI  110 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCcce
Confidence            554 345555544457888888653

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.64  E-value=0.078  Score=46.77  Aligned_cols=77  Identities=22%  Similarity=0.336  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      .+.+++|+|+++++|.+++..+...|++|+.+++++++.+.+ ++   .+.+. ++  |..+.+..+.+    .+..  .
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~---~g~~~-~~--~~~~~~~~~~~----~~~~~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RA---LGADV-AV--DYTRPDWPDQV----REALGGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HH---cCCCE-EE--ecCCccHHHHH----HHHcCCC
Confidence            478999999999999999998889999999999888765544 22   33221 22  22333332322    2222  2


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|.++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.61  E-value=0.07  Score=47.64  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|+|+ |++|..++..+...|++ |+++++++++.+.+ .+   .+.+. +  .|..+.+ .+++.+ ... ..+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~---~ga~~-~--i~~~~~~-~~~~~~-~~~-~~~  231 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KA---LGADF-V--INSGQDD-VQEIRE-LTS-GAG  231 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---hCCCE-E--EcCCcch-HHHHHH-HhC-CCC
Confidence            4889999986 89999999988889999 99998888765543 22   33321 2  2333332 333222 111 126


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.+.|
T Consensus       232 ~d~vid~~g  240 (339)
T cd08239         232 ADVAIECSG  240 (339)
T ss_pred             CCEEEECCC
Confidence            999999987

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.58  E-value=0.074  Score=46.56  Aligned_cols=79  Identities=19%  Similarity=0.292  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+    ...+.+. ++..+  ..+..+.+ ..... ...+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~~~~--~~~~~~~i-~~~~~-~~~~  209 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA----RALGADH-VIDYR--DPDLRERV-KALTG-GRGV  209 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH----HHcCCce-eeecC--CccHHHHH-HHHcC-CCCc
Confidence            588999999999999999999999999999999887654443    2233222 22221  11222221 11111 1369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.++++.|
T Consensus       210 d~v~~~~g  217 (323)
T cd08241         210 DVVYDPVG  217 (323)
T ss_pred             EEEEECcc
Confidence            99999876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK07877 hypothetical protein; Provisional

Probab=95.58  E-value=0.091  Score=51.72  Aligned_cols=79  Identities=15%  Similarity=0.234  Sum_probs=57.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCC------------------hhHHHHHHHHHHhcC--CcEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRR------------------KQVLDAAVSALRSLG--IKAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~------------------~~~~~~~~~~~~~~~--~~v~~~   68 (299)
                      .|++.+|+|.|+ | +|..++..|+..|.  ++.++|.+                  ..+.+..++.+.+.+  .++..+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            477899999999 4 99999999999994  78888763                  234555666666654  456777


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      ...++ ++.+.++++       ++|+||.+.
T Consensus       182 ~~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        182 TDGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             eccCC-HHHHHHHhc-------CCCEEEECC
Confidence            77766 556666554       578777775

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.55  E-value=0.21  Score=46.47  Aligned_cols=40  Identities=23%  Similarity=0.317  Sum_probs=35.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAV   55 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~   55 (299)
                      ++.|+||.|.+|.++++.|.++|++|.+++|+++..+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            5899999999999999999999999999999987654443

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.54  E-value=0.23  Score=44.57  Aligned_cols=40  Identities=25%  Similarity=0.283  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDA   53 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~   53 (299)
                      .|.+++|+|+ +++|.+++..+...|++ |+.+++++++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            4889999975 99999999888888998 6778888776554

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.53  E-value=0.093  Score=46.41  Aligned_cols=77  Identities=17%  Similarity=0.189  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+.+++|.|+++++|.+++....+.|++|+.+++++++.+.+    ++.+.+. ++  |..+. . .+.+....  -+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~-~-~~~~~~~~--~~~~  214 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL----KKLGAKE-VI--PREEL-Q-EESIKPLE--KQRW  214 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH----HHcCCCE-EE--cchhH-H-HHHHHhhc--cCCc
Confidence            367999999999999999988888999999999988765444    2233221 12  21221 1 12222221  2468


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       215 d~vld~~g  222 (326)
T cd08289         215 AGAVDPVG  222 (326)
T ss_pred             CEEEECCc
Confidence            99998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.52  E-value=1  Score=39.87  Aligned_cols=111  Identities=14%  Similarity=0.148  Sum_probs=69.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.|.|+ |.+|..++..|+.+|  ..|++++++++..+....++.+..   ....+...   +.+           .+.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d~~-----------~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---DYA-----------DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---CHH-----------HhC
Confidence            4889998 899999999999999  579999999887765555554321   11222211   111           134


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..|++|.++|.....   ..+.   .+.+..|    ..+++.+.+.+.+..+      .|.|++++.
T Consensus        67 ~aDiViita~~~~~~---~~~r---~dl~~~n----~~i~~~~~~~l~~~~~------~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKP---GETR---LDLLKRN----VAIFKEIIPQILKYAP------DAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHHHCC------CeEEEEecC
Confidence            789999999964321   1122   2233333    3456666666666542      577777754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.50  E-value=0.04  Score=47.80  Aligned_cols=44  Identities=16%  Similarity=0.268  Sum_probs=38.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~   58 (299)
                      +++++|.|+ ||-+++++..|++.|+. |.+++|+.++.+.+++.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            568999996 89999999999999986 999999998888776654

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.49  E-value=0.054  Score=45.38  Aligned_cols=37  Identities=19%  Similarity=0.443  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR   47 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~   47 (299)
                      .+|+|++++|.| .|.+|+++++.|.+.|++|+.++-.
T Consensus        19 ~~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~   55 (217)
T cd05211          19 DSLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDP   55 (217)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcC
Confidence            467899999999 6999999999999999987765543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.46  E-value=0.088  Score=49.03  Aligned_cols=40  Identities=20%  Similarity=0.346  Sum_probs=35.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL   51 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~   51 (299)
                      .+.||+++|+|.+ .||+.+|+.|...|++|+++++++...
T Consensus       251 ~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            5789999999987 599999999999999999998886543

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.45  E-value=0.046  Score=47.60  Aligned_cols=38  Identities=32%  Similarity=0.406  Sum_probs=35.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .++||.++|+|.|.-+|+.++..|.++|++|.++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            58899999999999999999999999999999888753

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=95.39  E-value=0.31  Score=42.97  Aligned_cols=59  Identities=15%  Similarity=0.235  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           26 IGFEISTQFGKHGASVAIMGRRKQVLD-AAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        26 iG~aia~~la~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      =|.++|+.|+++|+.|++.+|+++..+ ...+.+.+.+..+    ++     +..++++       .-|++|.+..
T Consensus        31 gGspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~----Aa-----S~aEAAa-------~ADVVIL~LP   90 (341)
T TIGR01724        31 GGSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKV----VS-----DDKEAAK-------HGEIHVLFTP   90 (341)
T ss_pred             CHHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCee----cC-----CHHHHHh-------CCCEEEEecC
Confidence            378999999999999999999887653 3344455544221    11     2333443       5699998865

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.38  E-value=0.12  Score=47.76  Aligned_cols=85  Identities=12%  Similarity=0.048  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .|.+++|.|++|++|..++..+...|+   +|+++++++++++...+.....    +.+..++  |-.+.++..+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i--~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV--NPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE--CCCccccHHHHHHHH
Confidence            378999999999999998776555554   6999999988776654422111    2122222  322222333333322


Q ss_pred             HHHcCCccEEEEcCC
Q 022335           86 FEHFGKLDILVNAAA  100 (299)
Q Consensus        86 ~~~~g~id~lv~~ag  100 (299)
                      .. -.++|.+|.+.|
T Consensus       253 t~-g~g~D~vid~~g  266 (410)
T cd08238         253 TG-GQGFDDVFVFVP  266 (410)
T ss_pred             hC-CCCCCEEEEcCC
Confidence            21 126899999876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.33  E-value=0.094  Score=46.21  Aligned_cols=80  Identities=15%  Similarity=0.183  Sum_probs=51.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..|.+++|.|+++++|.+++..+.+.|++|+++.+++++.+.+    ++.+.+. ++  |..+.+..+++ .+... -.+
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~-~~~~~-~~~  207 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL----KALGADE-VI--DSSPEDLAQRV-KEATG-GAG  207 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH----HhcCCCE-Ee--cccchhHHHHH-HHHhc-CCC
Confidence            3578999999999999999999889999999988887664443    2233221 11  22222222222 21111 136


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|.++.+.|
T Consensus       208 ~d~vl~~~g  216 (323)
T cd05282         208 ARLALDAVG  216 (323)
T ss_pred             ceEEEECCC
Confidence            999999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.32  E-value=0.12  Score=45.77  Aligned_cols=78  Identities=17%  Similarity=0.210  Sum_probs=47.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +.+++++||++++|.+++......|++|+.+++++++.+.+.    +.+.+. ++..  .+.+-.++ +.+... -.++|
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~----~~g~~~-~i~~--~~~~~~~~-v~~~~~-~~~~d  214 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK----KIGAEY-VLNS--SDPDFLED-LKELIA-KLNAT  214 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCcE-EEEC--CCccHHHH-HHHHhC-CCCCc
Confidence            344555599999999988776678999999998887655543    234332 2222  22222222 221111 12699


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      +++.+.|
T Consensus       215 ~vid~~g  221 (324)
T cd08291         215 IFFDAVG  221 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.31  E-value=0.18  Score=44.22  Aligned_cols=76  Identities=22%  Similarity=0.310  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+++|.|+++++|.+++......|++|+.+.+++++.+.+    .+.+.+.. +. +  .. +..+.+...   -.++
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~~-~--~~-~~~~~i~~~---~~~~  209 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL----KELGADEV-VI-D--DG-AIAEQLRAA---PGGF  209 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCcEE-Ee-c--Cc-cHHHHHHHh---CCCc
Confidence            588999999999999999998888999999998887654443    23333222 21 1  11 222222222   2369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.++++.|
T Consensus       210 d~vl~~~~  217 (320)
T cd08243         210 DKVLELVG  217 (320)
T ss_pred             eEEEECCC
Confidence            99999876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=95.26  E-value=0.15  Score=45.34  Aligned_cols=42  Identities=26%  Similarity=0.414  Sum_probs=37.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      .+.+++|.|+++.+|.+++..+.+.|++|+.++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999889999999999988776655

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.26  E-value=0.13  Score=45.58  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=51.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..|.+++|.|+++++|.+++......|++|+.+.+++++.+.+    ++.+.+ .++.  ..+. +..+.+.....  .+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~v~~--~~~~-~~~~~~~~~~~--~~  207 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL----KSLGCD-RPIN--YKTE-DLGEVLKKEYP--KG  207 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH----HHcCCc-eEEe--CCCc-cHHHHHHHhcC--CC
Confidence            3588999999999999999888888899999998887665443    223322 2222  2222 22222222221  36


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|.++++.|
T Consensus       208 vd~v~~~~g  216 (329)
T cd08250         208 VDVVYESVG  216 (329)
T ss_pred             CeEEEECCc
Confidence            999999876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.21  E-value=0.18  Score=45.65  Aligned_cols=78  Identities=15%  Similarity=0.283  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.+++|.|+ +++|..++..+...|+ +|+.+++++++.+.+    ++.+... ++  |..+ .+++.+.+.++..  +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~----~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~  256 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA----KKFGVTE-FV--NPKDHDKPVQEVIAEMTG--G  256 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCce-EE--cccccchhHHHHHHHHhC--C
Confidence            4889999985 8999998887778898 799999988765543    3334322 22  2222 1234444443332  3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus       257 ~~d~vid~~G  266 (369)
T cd08301         257 GVDYSFECTG  266 (369)
T ss_pred             CCCEEEECCC
Confidence            6999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.21  E-value=0.11  Score=45.33  Aligned_cols=80  Identities=16%  Similarity=0.229  Sum_probs=51.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .+|.+++|.|+++++|.+++..+...|++|+.+++++++.+.+    .+.+.+. ++..  .+.+..+.+. .... -.+
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~~~--~~~~~~~~~~-~~~~-~~~  205 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA----RAAGADH-VINY--RDEDFVERVR-EITG-GRG  205 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHCCCCE-EEeC--CchhHHHHHH-HHcC-CCC
Confidence            3588999999999999999998888999999998887665443    2333322 2222  2222222221 1111 126


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|.++++.+
T Consensus       206 ~d~vl~~~~  214 (320)
T cd05286         206 VDVVYDGVG  214 (320)
T ss_pred             eeEEEECCC
Confidence            999999876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.20  E-value=0.14  Score=46.44  Aligned_cols=77  Identities=21%  Similarity=0.239  Sum_probs=49.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|+|+ +++|..++..+...|+ +|+++++++++++.. .   +.+.+. +  .|..+.+-.++ +.+..  .++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~---~~Ga~~-~--i~~~~~~~~~~-i~~~~--~~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-R---ELGATA-T--VNAGDPNAVEQ-VRELT--GGG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-H---HcCCce-E--eCCCchhHHHH-HHHHh--CCC
Confidence            4889999985 8999998887777899 588888888765543 2   234321 2  23233222222 22221  136


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++|.+.|
T Consensus       260 ~d~vid~~G  268 (371)
T cd08281         260 VDYAFEMAG  268 (371)
T ss_pred             CCEEEECCC
Confidence            999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.16  E-value=0.089  Score=47.97  Aligned_cols=38  Identities=16%  Similarity=0.329  Sum_probs=32.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQV   50 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~   50 (299)
                      +.+++.|.||+|.+|+.+.+.|.++ ..+|..++++.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa   75 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA   75 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence            4568999999999999999999999 7788888876543

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.14  E-value=0.082  Score=47.38  Aligned_cols=39  Identities=21%  Similarity=0.229  Sum_probs=35.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      ..|.||++.|.|. |.||+.+|+.|...|++|+..+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4689999999998 99999999999999999999998754

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.08  E-value=0.39  Score=42.31  Aligned_cols=82  Identities=17%  Similarity=0.178  Sum_probs=55.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH----------HHhc--CCcEEEEEcCCCCHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA----------LRSL--GIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~----------~~~~--~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      ++.|+|. |.+|.++++.|+++|++|++.+|+++..+.+.+.          +.+.  ..++.++.  +.+. .++++++
T Consensus         2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~--vp~~-~~~~v~~   77 (298)
T TIGR00872         2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVM--VPHG-IVDAVLE   77 (298)
T ss_pred             EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEE--cCch-HHHHHHH
Confidence            4777775 7899999999999999999999999887766432          1111  12333333  3333 6777777


Q ss_pred             HHHHHcCCccEEEEcCCC
Q 022335           84 STFEHFGKLDILVNAAAG  101 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~  101 (299)
                      ++...+.+=+++|++...
T Consensus        78 ~l~~~l~~g~ivid~st~   95 (298)
T TIGR00872        78 ELAPTLEKGDIVIDGGNS   95 (298)
T ss_pred             HHHhhCCCCCEEEECCCC
Confidence            777665444677776543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PLN02494 adenosylhomocysteinase

Probab=95.02  E-value=0.12  Score=48.04  Aligned_cols=39  Identities=28%  Similarity=0.414  Sum_probs=35.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV   50 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~   50 (299)
                      .+.|++++|.|.+ .||+.+++.+...|++|+++++++.+
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            3679999999987 89999999999999999999988754

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.02  E-value=0.36  Score=44.33  Aligned_cols=81  Identities=21%  Similarity=0.283  Sum_probs=47.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ..|.+++|. |.++||..++..+...|++++++ ++++++++..    ++.+.+.    .|....++..+.+.++.. -.
T Consensus       184 ~~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a----~~~Ga~~----v~~~~~~~~~~~v~~~~~-~~  253 (393)
T TIGR02819       184 GPGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA----RSFGCET----VDLSKDATLPEQIEQILG-EP  253 (393)
T ss_pred             CCCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH----HHcCCeE----EecCCcccHHHHHHHHcC-CC
Confidence            348899995 56899999988777889986554 5555443332    3334331    222222222222222221 12


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      ++|++|.+.|..
T Consensus       254 g~Dvvid~~G~~  265 (393)
T TIGR02819       254 EVDCAVDCVGFE  265 (393)
T ss_pred             CCcEEEECCCCc
Confidence            599999999954

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]

Probab=95.02  E-value=0.19  Score=41.70  Aligned_cols=83  Identities=18%  Similarity=0.266  Sum_probs=58.6

Q ss_pred             CCEEEEecCCChHHH-----HHHHHHHHcCCeEEEEeCCh-----hH-------------------HHHHHHHHHhcC-C
Q 022335           14 GKVALITGGGSGIGF-----EISTQFGKHGASVAIMGRRK-----QV-------------------LDAAVSALRSLG-I   63 (299)
Q Consensus        14 ~k~vlItGas~giG~-----aia~~la~~G~~Vv~~~r~~-----~~-------------------~~~~~~~~~~~~-~   63 (299)
                      ++.++||-|-||.|+     ++...||+.|.+|++++.+-     +-                   +.-.++.+++.. .
T Consensus         2 ~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~DiGLRNLDlimGlE~RiVYd~vdVi~g~~~l~QALIkDKr~~   81 (272)
T COG2894           2 ARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDIGLRNLDLIMGLENRIVYDLVDVIEGEATLNQALIKDKRLE   81 (272)
T ss_pred             ceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCcCchhhhhhhcccceeeeeehhhhcCccchhhHhhccccCC
Confidence            689999999999997     67788999999999998632     11                   111122222222 2


Q ss_pred             cEEEEE------cCCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 022335           64 KAVGFE------GDVRRQEHAKKVVESTFEHFGKLDILVNA   98 (299)
Q Consensus        64 ~v~~~~------~Dl~~~~~v~~~~~~~~~~~g~id~lv~~   98 (299)
                      ++..++      -|.-+++.++.+++++++  ..+|.+++-
T Consensus        82 nL~lLPAsQtrdKdalt~E~v~~vv~eL~~--~~fDyIi~D  120 (272)
T COG2894          82 NLFLLPASQTRDKDALTPEGVKKVVNELKA--MDFDYIIID  120 (272)
T ss_pred             ceEecccccccCcccCCHHHHHHHHHHHHh--cCCCEEEec
Confidence            444444      377788999999999987  589988875

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.99  E-value=0.15  Score=46.08  Aligned_cols=76  Identities=17%  Similarity=0.228  Sum_probs=49.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      .|.++||.|+ +++|.+++..+...|++ |+.+++++++.+.+    ++.+.+ .++  |..+.+..+.    +.+..  
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~----~~~Ga~-~~i--~~~~~~~~~~----i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA----REFGAT-HTV--NSSGTDPVEA----IRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCc-eEE--cCCCcCHHHH----HHHHhCC
Confidence            4889999985 99999998877778986 88888887765554    233432 222  3233222222    22222  


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      .++|+++.+.|
T Consensus       244 ~g~d~vid~~g  254 (358)
T TIGR03451       244 FGADVVIDAVG  254 (358)
T ss_pred             CCCCEEEECCC
Confidence            25999999987

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.94  E-value=0.16  Score=45.01  Aligned_cols=78  Identities=19%  Similarity=0.268  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      .|.+++|.|+++++|.+++..+.+.|++++++.+++++.+.+    .+.+.+. ++  |..+.+.   +.+.+.+..  .
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~---~~~~~~~~~~~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC----KKLAAII-LI--RYPDEEG---FAPKVKKLTGEK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCcE-EE--ecCChhH---HHHHHHHHhCCC
Confidence            478999999999999999999989999988888887665544    2233321 22  2222221   222222222  3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|.++++.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            5999999875

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.92  E-value=0.048  Score=43.25  Aligned_cols=39  Identities=23%  Similarity=0.376  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      +++||+++|.|.|.-+|+-++..|.++|+.|.++.....
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~   71 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK   71 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC
Confidence            588999999999999999999999999999998877653

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK07411 hypothetical protein; Validated

Probab=94.92  E-value=0.21  Score=45.77  Aligned_cols=81  Identities=17%  Similarity=0.303  Sum_probs=54.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|+..+|+|.|+ ||+|..++..|+..|.. +.++|.+                   ..+.+..++.+++.+.  ++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            567888999987 58999999999999987 7777653                   2245566677766654  45555


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ...++.. ...+++.       ..|+||.+..
T Consensus       114 ~~~~~~~-~~~~~~~-------~~D~Vvd~~d  137 (390)
T PRK07411        114 ETRLSSE-NALDILA-------PYDVVVDGTD  137 (390)
T ss_pred             ecccCHH-hHHHHHh-------CCCEEEECCC
Confidence            5555542 3333332       5777777753

>PRK14851 hypothetical protein; Provisional

Probab=94.91  E-value=0.24  Score=48.58  Aligned_cols=80  Identities=14%  Similarity=0.222  Sum_probs=55.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcC--CcEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLG--IKAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~--~~v~~~   68 (299)
                      .|++.+|+|.| -||+|..++..|+..|.. +.++|.+                   ..+.+..++.+.+.+  .++..+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            47789999999 569999999999999986 6677642                   234555666666554  466777


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      ...++ ++.+.++++       ++|+||.+.
T Consensus       119 ~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        119 PAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             ecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            77775 444455544       567777554

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.90  E-value=0.058  Score=47.26  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=35.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      +++||.+.|.|.++-+|+.++..|.++|++|.++.++..
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            578999999999999999999999999999999977654

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.90  E-value=0.28  Score=40.71  Aligned_cols=57  Identities=18%  Similarity=0.253  Sum_probs=41.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVR   73 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~   73 (299)
                      +|+||.+||.|| |.+|..-++.|++.|++|++++.+.. .++.    +.+. +++.++.-+..
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~----l~~~-~~i~~~~~~~~   63 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTL----LAEQ-GGITWLARCFD   63 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHH----HHHc-CCEEEEeCCCC
Confidence            578999999986 56889999999999999999987653 2222    2222 26777766655

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.88  E-value=0.12  Score=36.88  Aligned_cols=41  Identities=17%  Similarity=0.230  Sum_probs=34.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcC---CeEEEE-eCChhHHHHHHHHH
Q 022335           17 ALITGGGSGIGFEISTQFGKHG---ASVAIM-GRRKQVLDAAVSAL   58 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G---~~Vv~~-~r~~~~~~~~~~~~   58 (299)
                      +.|+ |.|.+|.++++.|.+.|   .+|.++ +|++++.+++.++.
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            4455 88999999999999999   899965 99998888876655

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.88  E-value=0.03  Score=40.97  Aligned_cols=37  Identities=27%  Similarity=0.396  Sum_probs=32.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      +++|+.+||+|+ |.+|..=++.|.+.|++|.+++...
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            578999999999 8999999999999999999999886

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.88  E-value=0.25  Score=44.55  Aligned_cols=81  Identities=19%  Similarity=0.294  Sum_probs=49.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.++||+| ++++|.+++..+...|+ +|+++++++++.+.+    ++.+.+. ++..+-.+..+..+.+.+... -.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~----~~~g~~~-vi~~~~~~~~~~~~~i~~~~~-~~~  249 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA----REFGADA-TIDIDELPDPQRRAIVRDITG-GRG  249 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCCe-EEcCcccccHHHHHHHHHHhC-CCC
Confidence            588999997 59999999988888899 899898877654433    2334322 222111111111112222211 136


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++++.|
T Consensus       250 ~d~vid~~g  258 (361)
T cd08231         250 ADVVIEASG  258 (361)
T ss_pred             CcEEEECCC
Confidence            999999987

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.88  E-value=0.13  Score=46.49  Aligned_cols=74  Identities=20%  Similarity=0.328  Sum_probs=48.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|++++|.|+ |++|..++..+...|++|++++.+.++.....+   +.+.+.. +  |-.+.+.+.+       ..+++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~---~~Ga~~v-i--~~~~~~~~~~-------~~~~~  248 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN---RLGADSF-L--VSTDPEKMKA-------AIGTM  248 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH---hCCCcEE-E--cCCCHHHHHh-------hcCCC
Confidence            5889999775 899999988888889999888877654433322   2343222 2  2233322222       22468


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|.+.|
T Consensus       249 D~vid~~g  256 (360)
T PLN02586        249 DYIIDTVS  256 (360)
T ss_pred             CEEEECCC
Confidence            99999887

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.86  E-value=0.3  Score=44.84  Aligned_cols=41  Identities=17%  Similarity=0.193  Sum_probs=34.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA   53 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~   53 (299)
                      .|.+++|+|+++++|.+++..+...|+++++++++.++.+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~  229 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEY  229 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            47899999999999999998888899998888877765443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.82  E-value=0.29  Score=44.71  Aligned_cols=42  Identities=19%  Similarity=0.205  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      .|.+++|+|+++++|.+++..+...|++++++++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999988888899998888877665543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.81  E-value=0.26  Score=44.09  Aligned_cols=75  Identities=25%  Similarity=0.376  Sum_probs=48.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+++|+|+++++|.+++......|++|+.+.++ ++ ...   +++.+.+ .+  .|..+.+..+++    .. .+++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~---~~~~g~~-~~--~~~~~~~~~~~l----~~-~~~v  228 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPL---VKSLGAD-DV--IDYNNEDFEEEL----TE-RGKF  228 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHH---HHHhCCc-eE--EECCChhHHHHH----Hh-cCCC
Confidence            48999999999999999999888899998887764 22 222   2233322 12  233333333322    22 2579


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.++++.|
T Consensus       229 d~vi~~~g  236 (350)
T cd08248         229 DVILDTVG  236 (350)
T ss_pred             CEEEECCC
Confidence            99999877

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=94.81  E-value=0.46  Score=35.02  Aligned_cols=79  Identities=25%  Similarity=0.254  Sum_probs=51.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      |.++|-.|+++|.   +...+++.+ .+++.++.++...+-....+...+  .++.++..|+.+..      +..  ..+
T Consensus         1 g~~vlD~~~G~G~---~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~--~~~   69 (117)
T PF13659_consen    1 GDRVLDPGCGSGT---FLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGDARDLP------EPL--PDG   69 (117)
T ss_dssp             TEEEEEETSTTCH---HHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESHHHHHH------HTC--TTT
T ss_pred             CCEEEEcCcchHH---HHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECchhhch------hhc--cCc
Confidence            4567777777664   333334445 889999999988888777776653  47999999964332      111  126


Q ss_pred             CccEEEEcCCCCC
Q 022335           91 KLDILVNAAAGNF  103 (299)
Q Consensus        91 ~id~lv~~ag~~~  103 (299)
                      ++|+++.|.....
T Consensus        70 ~~D~Iv~npP~~~   82 (117)
T PF13659_consen   70 KFDLIVTNPPYGP   82 (117)
T ss_dssp             -EEEEEE--STTS
T ss_pred             eeEEEEECCCCcc
Confidence            8999999987653

...

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=94.81  E-value=0.28  Score=43.70  Aligned_cols=91  Identities=19%  Similarity=0.081  Sum_probs=55.9

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-------Hh--cCCcEEEEEcCCCCHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-------RS--LGIKAVGFEGDVRRQEHA   78 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-------~~--~~~~v~~~~~Dl~~~~~v   78 (299)
                      +...++++++.|+|.+ .+|.++++.|...|++|++..++.++......+.       .+  ...++.++.+-   ++..
T Consensus        11 ~~~~L~gktIgIIG~G-smG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVP---d~~~   86 (330)
T PRK05479         11 DLSLIKGKKVAIIGYG-SQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLP---DEVQ   86 (330)
T ss_pred             ChhhhCCCEEEEEeeH-HHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCC---HHHH
Confidence            4456889999999865 7999999999999999988777644333322211       11  12234444332   2333


Q ss_pred             HHHH-HHHHHHcCCccEEEEcCCCC
Q 022335           79 KKVV-ESTFEHFGKLDILVNAAAGN  102 (299)
Q Consensus        79 ~~~~-~~~~~~~g~id~lv~~ag~~  102 (299)
                      ..++ +++...+.+=.+|++++|+.
T Consensus        87 ~~V~~~~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         87 AEVYEEEIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHHHHHHHhcCCCCCEEEECCCCC
Confidence            5555 55555443324678888854

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=94.79  E-value=0.15  Score=43.99  Aligned_cols=84  Identities=20%  Similarity=0.292  Sum_probs=65.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +|-+++--||.+++|+++..-....|.+.+-+-|+.+..+++.+++...+.+..+-.-.+.+.+     .......++++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~-----~~k~~~~~~~p  234 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRK-----MKKFKGDNPRP  234 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchh-----hhhhhccCCCc
Confidence            3778999999999999988877778999999999999999999999998865554333333332     22233356789


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      ...+||.|.
T Consensus       235 rLalNcVGG  243 (354)
T KOG0025|consen  235 RLALNCVGG  243 (354)
T ss_pred             eEEEeccCc
Confidence            999999984

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.76  E-value=0.18  Score=43.79  Aligned_cols=76  Identities=17%  Similarity=0.205  Sum_probs=47.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|.|+ +++|..++..+...|++ |+++++++++++..    ++.+.+.. +  |..+.   .+.+.+... -.+
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a----~~~Ga~~~-i--~~~~~---~~~~~~~~~-~~g  187 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA----LSFGATAL-A--EPEVL---AERQGGLQN-GRG  187 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHcCCcEe-c--Cchhh---HHHHHHHhC-CCC
Confidence            5889999987 89999998887788997 77787777654432    23343221 1  21111   111222111 136


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.+.|
T Consensus       188 ~d~vid~~G  196 (280)
T TIGR03366       188 VDVALEFSG  196 (280)
T ss_pred             CCEEEECCC
Confidence            999999987

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.73  E-value=0.35  Score=41.02  Aligned_cols=76  Identities=22%  Similarity=0.403  Sum_probs=46.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcC--CcEEEEEcCCCC
Q 022335           17 ALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLG--IKAVGFEGDVRR   74 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~v~~~~~Dl~~   74 (299)
                      ++|.| .||+|..+++.|+..|.. +.++|.+.                   .+.+..++.+.+.+  .++..+..++++
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            67776 679999999999999987 77777642                   23444444554443  345555566654


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           75 QEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        75 ~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      .++...      +.+.++|++|++.
T Consensus        81 ~~~~~~------~f~~~~DvVi~a~   99 (234)
T cd01484          81 EQDFND------TFFEQFHIIVNAL   99 (234)
T ss_pred             hhhchH------HHHhCCCEEEECC
Confidence            322110      1123677777763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=94.71  E-value=0.089  Score=44.39  Aligned_cols=35  Identities=23%  Similarity=0.232  Sum_probs=30.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG   45 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~   45 (299)
                      .+|++++++|.| .|.+|+.+++.|.+.|++|+.++
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~   61 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVS   61 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            457899999997 69999999999999999999544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.68  E-value=0.2  Score=45.65  Aligned_cols=74  Identities=20%  Similarity=0.344  Sum_probs=48.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+++|.|+ +++|..++......|++|+++++++++..+..   ++.+.+.. +  |..+.+.+.       +..+++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a---~~lGa~~~-i--~~~~~~~v~-------~~~~~~  243 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAI---DRLGADSF-L--VTTDSQKMK-------EAVGTM  243 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHH---HhCCCcEE-E--cCcCHHHHH-------HhhCCC
Confidence            4889999986 89999999888888999998888765432222   23343322 2  222322222       222469


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       244 D~vid~~G  251 (375)
T PLN02178        244 DFIIDTVS  251 (375)
T ss_pred             cEEEECCC
Confidence            99999987

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.68  E-value=0.31  Score=43.07  Aligned_cols=113  Identities=14%  Similarity=0.215  Sum_probs=66.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLG----IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++.|+|+ |.+|..++..++..|. .|++++++++.++....++.+..    .... +... ++.+   .        +
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~~-~d~~---~--------~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITGT-NDYE---D--------I   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEeC-CCHH---H--------H
Confidence            46899999 8999999999999875 89999998877655444333221    1111 1110 1111   1        2


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|.++|.....   ..+.   .+.+..|+    -+.+.+.+.+.+..+      .+.+|+++.
T Consensus        69 ~~aDiVii~~~~p~~~---~~~r---~~~~~~n~----~i~~~i~~~i~~~~~------~~~viv~tN  120 (307)
T PRK06223         69 AGSDVVVITAGVPRKP---GMSR---DDLLGINA----KIMKDVAEGIKKYAP------DAIVIVVTN  120 (307)
T ss_pred             CCCCEEEECCCCCCCc---CCCH---HHHHHHHH----HHHHHHHHHHHHHCC------CeEEEEecC
Confidence            3679999999864321   2222   22233333    455666666666542      456666654

>PLN02827 Alcohol dehydrogenase-like

Probab=94.67  E-value=0.32  Score=44.38  Aligned_cols=78  Identities=18%  Similarity=0.271  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ-EHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~~~~~~g   90 (299)
                      .|.++||.|+ |++|..++..+...|+. |+++++++++.+..    ++.+.+. ++  |..+. ++..+.+.++..  +
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a----~~lGa~~-~i--~~~~~~~~~~~~v~~~~~--~  262 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA----KTFGVTD-FI--NPNDLSEPIQQVIKRMTG--G  262 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCcE-EE--cccccchHHHHHHHHHhC--C
Confidence            4899999986 89999998887788986 66777777654433    2334322 22  32221 233343333322  3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus       263 g~d~vid~~G  272 (378)
T PLN02827        263 GADYSFECVG  272 (378)
T ss_pred             CCCEEEECCC
Confidence            7999999988

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.66  E-value=0.15  Score=40.43  Aligned_cols=35  Identities=29%  Similarity=0.492  Sum_probs=31.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR   46 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r   46 (299)
                      +|+|+.++|.|| |.+|...++.|.+.|++|++++.
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            789999999986 57899999999999999998864

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.66  E-value=0.2  Score=45.19  Aligned_cols=73  Identities=22%  Similarity=0.400  Sum_probs=47.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC---hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR---KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|.+++|+|+ |++|...+..+...|++|++++++   +++.+    .+++.+.+.  +  |..+ +++.+ .    ...
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~----~~~~~Ga~~--v--~~~~-~~~~~-~----~~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD----IVEELGATY--V--NSSK-TPVAE-V----KLV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH----HHHHcCCEE--e--cCCc-cchhh-h----hhc
Confidence            5889999986 999999998777789999999984   43333    233444432  2  3222 22222 1    123


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      +.+|++|.+.|
T Consensus       237 ~~~d~vid~~g  247 (355)
T cd08230         237 GEFDLIIEATG  247 (355)
T ss_pred             CCCCEEEECcC
Confidence            57999999987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.66  E-value=0.3  Score=44.86  Aligned_cols=80  Identities=15%  Similarity=0.221  Sum_probs=51.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|++.+|+|.|+ ||+|..++..|+..|.. +.++|.+.                   .+.+..++.+.+.+.  ++..+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            357888999987 58999999999999986 77777532                   245555666666554  34445


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      ...++.. ...+++.       ..|+||.+.
T Consensus       118 ~~~i~~~-~~~~~~~-------~~D~Vvd~~  140 (392)
T PRK07878        118 EFRLDPS-NAVELFS-------QYDLILDGT  140 (392)
T ss_pred             eccCChh-HHHHHHh-------cCCEEEECC
Confidence            5555432 2233332       567777664

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.65  E-value=0.31  Score=44.16  Aligned_cols=79  Identities=13%  Similarity=0.178  Sum_probs=50.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ-EHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~v~~~~~~~~~~~   89 (299)
                      ..|.+++|.|+ +++|..++..+...|+ +|+.+++++++.+.+ +   +.+.+ .++  |..+. ..+.+.+.+...  
T Consensus       183 ~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~---~~ga~-~~i--~~~~~~~~~~~~~~~~~~--  252 (365)
T cd08277         183 EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-K---EFGAT-DFI--NPKDSDKPVSEVIREMTG--  252 (365)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-H---HcCCC-cEe--ccccccchHHHHHHHHhC--
Confidence            35889999975 9999999887778898 688889887765544 2   23322 112  22211 122233333322  


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      +++|+++.+.|
T Consensus       253 ~g~d~vid~~g  263 (365)
T cd08277         253 GGVDYSFECTG  263 (365)
T ss_pred             CCCCEEEECCC
Confidence            47999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	299
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		8e-46
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		1e-36
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-28
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		4e-27
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		7e-27
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-26
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-26
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-25
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-25
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		6e-25
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		5e-24
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-23
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		4e-23
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-22
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		2e-22
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-22
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		6e-22
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		8e-21
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		2e-20
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-20
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-20
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		5e-20
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		8e-20
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-19
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-19
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-19
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-19
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-19
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-19
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		6e-19
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		9e-19
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-18
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-18
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		8e-18
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-17
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-17
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-17
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		3e-17
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-17
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		6e-17
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-17
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		6e-17
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		7e-17
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		9e-17
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-16
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-16
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		3e-16
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		3e-16
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		5e-16
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		7e-16
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		2e-15
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-15
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-15
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-15
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-15
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		5e-15
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-15
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		8e-15
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		8e-15
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		9e-15
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-14
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		1e-14
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		2e-14
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-14
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-14
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		4e-14
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-14
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-14
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-13
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-13
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-13
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-13
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-13
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-13
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-13
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-13
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-13
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		3e-13
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-13
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		3e-13
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		4e-13
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-13
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-13
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		4e-13
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-13
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		6e-13
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-13
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		6e-13
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		8e-13
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		9e-13
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-12
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-12
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		1e-12
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-12
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-12
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-12
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		1e-12
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		1e-12
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-12
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		1e-12
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-12
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-12
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-12
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-12
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-12
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-12
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-12
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-12
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		6e-12
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		8e-12
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		9e-12
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-11
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-11
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-11
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-11
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-11
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-11
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		2e-11
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		2e-11
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		2e-11
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-11
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		3e-11
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-11
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-11
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		4e-11
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		5e-11
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		6e-11
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		6e-11
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		7e-11
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		8e-11
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-10
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		1e-10
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-10
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-10
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		4e-10
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		6e-10
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		6e-10
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		9e-10
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		1e-09
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		1e-09
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		1e-09
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-09
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-09
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		2e-09
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-09
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-09
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-09
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-09
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		5e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		6e-09
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		7e-09
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		9e-09
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		9e-09
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-08
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-08
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-08
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-08
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		3e-08
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-08
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		3e-08
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-08
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		4e-08
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		4e-08
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		5e-08
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-08
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		5e-08
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		5e-08
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		6e-08
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		6e-08
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		7e-08
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		7e-08
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		9e-08
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		9e-08
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-07
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-07
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-07
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		2e-07
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		3e-07
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		3e-07
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		4e-07
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		6e-07
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		6e-07
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		9e-07
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		1e-06
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		1e-06
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		1e-06
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-06
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		1e-06
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-06
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-06
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		2e-06
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-06
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-06
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-06
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-06
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		3e-06
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-06
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		3e-06
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		3e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		3e-06
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		3e-06
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		3e-06
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		3e-06
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		3e-06
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		3e-06
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		3e-06
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		3e-06
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		3e-06
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		4e-06
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		5e-06
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		5e-06
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		5e-06
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		5e-06
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		5e-06
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		6e-06
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		6e-06
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		7e-06
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		7e-06
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		7e-06
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		8e-06
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-05
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		1e-05
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		2e-05
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-05
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-05
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		2e-05
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-05
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		3e-05
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-05
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		4e-05
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		4e-05
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		4e-05
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		5e-05
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		5e-05
2o50_A	315	The Crystal Structure Of Toxoplasma Gondii Enoyl Ac		5e-05
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		6e-05
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		7e-05
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		7e-05
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		8e-05
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		1e-04
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		1e-04
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-04
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-04
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-04
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		1e-04
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-04
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-04
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		2e-04
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		3e-04
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		3e-04
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		3e-04
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		4e-04
1d7o_A	297	Crystal Structure Of Brassica Napus Enoyl Acyl Carr		4e-04
1eno_A	312	Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLE		4e-04
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		4e-04
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		5e-04
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		7e-04
1cwu_A	296	Brassica Napus Enoyl Acp Reductase A138g Mutant Com		7e-04
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		7e-04
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		8e-04
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		8e-04
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		8e-04
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		9e-04

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score =  180 bits (457), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/265 (40%), Positives = 141/265 (53%), Gaps = 12/265 (4%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKA 65
           F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R   +VL AA     + G + 
Sbjct: 20  FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 79
Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMDID+ G
Sbjct: 80  LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 139
Query: 126 TFTMCHEAL-KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
           TF +      K+ +             I+NI+ATL       Q+H          +TR+L
Sbjct: 140 TFNVSRVLYEKFFRD--------HGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 191
Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALY 243
           A+EWG   +IRVN +APGPI  T G+ +L  P    S      PL +LG K +IA + LY
Sbjct: 192 AVEWGPQ-NIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 250
Query: 244 LTSDTGKYVNGTTLIVDGGLWLSRP 268
           L S    YV G  L+ DGG WL+ P
Sbjct: 251 LASPLASYVTGAVLVADGGAWLTFP 275

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/252 (40%), Positives = 136/252 (53%), Gaps = 9/252 (3%)
Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
           K KV +ITGG SG G   +T+F K GA V I GR K+ L+ A   +     + +  + DV
Sbjct: 5   KEKVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDV 64
Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
           R  +  +K +E   E FG++DIL+N AAGNF+  AEDLS NG+ +V++I   GTF  C +
Sbjct: 65  RNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTF-YCSQ 123
Query: 133 AL-KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
           A+ KY  +            I+N  AT  + A    IH           T+ LA+EWG  
Sbjct: 124 AIGKYWIE------KGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRK 177
Query: 192 YDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           Y IRVN IAPGPI  T G +KL   +E   +    +PL +LG   +IA  A YL SD   
Sbjct: 178 YGIRVNAIAPGPIERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAA 237
Query: 251 YVNGTTLIVDGG 262
           Y+NGT    DGG
Sbjct: 238 YINGTCXTXDGG 249

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 127/257 (49%), Gaps = 18/257 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
           L+G+VAL+TGG  G+GF I+    + G SV +  R  ++  +AA       G++ + F  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   E  KK++E+  E FGKLD +VNAA  N    AE+   + FR V++++  GT+ +C
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXX-XXXXITRNLALEWG 189
            EA   L++            I+NI +      +   I            +T+ LA EWG
Sbjct: 139 REAFSLLRE-------SDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 191
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLT 245
             Y IRVN IAPG    T     +  D    +  DYM    PL + G   D+   A++L 
Sbjct: 192 -RYGIRVNVIAPGWY-RTKMTEAVFSD---PEKLDYMLKRIPLGRTGVPEDLKGVAVFLA 246
Query: 246 SDTGKYVNGTTLIVDGG 262
           S+  KYV G  + VDGG
Sbjct: 247 SEEAKYVTGQIIFVDGG 263

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  118 bits (295), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 10/256 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           L+GKV +ITG  +G+G  ++ +F    A V +  R K+   ++ +  ++ +G +A+  +G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWG 189
            EA+KY  +            ++N+S ++H    W   +H          +T+ LALE+ 
Sbjct: 125 REAIKYFVE------NDIKGTVINMS-SVHEKIPWPLFVHYAASKGGMKLMTKTLALEY- 176
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A   IRVN I PG I       K A  E  +     +P+  +GE  +IA  A +L S   
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236
Query: 250 KYVNGTTLIVDGGLWL 265
            YV G TL  DGG+ L
Sbjct: 237 SYVTGITLFADGGMTL 252

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  117 bits (293), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 10/256 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           L+GKV +ITG  +G+G  ++ +F    A V +  R K+   ++ +  ++ +G +A+  +G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWG 189
            EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ 
Sbjct: 125 REAIKYFVE------NDIKGTVINMS-SVHEKIPWPLFVHYAASKGGMKLMTETLALEY- 176
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A   IRVN I PG I       K A  E  +     +P+  +GE  +IA  A +L S   
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236
Query: 250 KYVNGTTLIVDGGLWL 265
            YV G TL  DGG+ L
Sbjct: 237 SYVTGITLFADGGMTL 252

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 10/254 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           L+GKV +ITG  +G+G  ++ +F    A V +  R K+   ++ +  ++ +G +A+  +G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWG 189
            EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ 
Sbjct: 125 REAIKYFVE------NDIKGTVINMS-SVHEKIPWPLFVHYAASKGGMKLMTETLALEY- 176
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A   IRVN I PG I       K A  E  +     +P+  +GE  +IA  A +L S   
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236
Query: 250 KYVNGTTLIVDGGL 263
            YV G TL  DGG+
Sbjct: 237 SYVTGITLFADGGM 250

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 10/254 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           L+GKV +ITG  +G+G  ++ +F    A V +  R K+   ++ +  ++ +G +A+  +G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWG 189
            EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ 
Sbjct: 125 REAIKYFVE------NDIKGTVINMS-SVHEKIPWPLFVHYAASKGGMKLMTETLALEY- 176
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A   IRVN I PG I       K A  E  +     +P+  +GE  +IA  A +L S   
Sbjct: 177 APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236
Query: 250 KYVNGTTLIVDGGL 263
            YV G TL  DGG+
Sbjct: 237 SYVTGITLFADGGM 250

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 12/255 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAVGFE 69
           LK KV +ITGG +G+G  ++ +FG+  A V I      ++ LDA    +   G +A+  +
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQ 71
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           GDV ++E    +V++  + FG LD+++N A     V + +LS + +  V+D +  G F  
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLG 131
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEW 188
             EA+KY  +            ++N+S ++H    W   +H          +T  LALE+
Sbjct: 132 SREAIKYFVE------NDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A   IRVN I PG +       K A     +     +P+  +G+  ++A  A +L S  
Sbjct: 185 -APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQ 243
Query: 249 GKYVNGTTLIVDGGL 263
             YV G TL  DGG+
Sbjct: 244 ASYVTGITLFADGGM 258

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 12/255 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAVGFE 69
           LK KV +ITGG +G+G  ++ +FG+  A V I      ++ LDA    +   G +A+  +
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQ 71
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           GDV ++E    +V++  + FG LD+++N A     V + +LS + +  V+D +  G F  
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLG 131
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEW 188
             EA+KY  +            ++N+S ++H    W   +H          +T  LALE+
Sbjct: 132 SREAIKYFVE------NDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A   IRVN I PG +       K A     +     +P+  +G+  ++A  A +L S  
Sbjct: 185 -APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQ 243
Query: 249 GKYVNGTTLIVDGGL 263
             YV G TL  DGG+
Sbjct: 244 ASYVTGITLFADGGM 258

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 12/255 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAVGFE 69
           LK KV +ITGG +G+G  ++ +FG+  A V I      ++ LDA    +   G +A+  +
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAK-KEVEEAGGQAIIVQ 71
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           GDV ++E    +V++  + FG LD+++N A     V + +LS + +  V+D +  G F  
Sbjct: 72  GDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLG 131
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEW 188
             EA+KY  +            ++N+S ++H    W   +H          +T  LALE+
Sbjct: 132 SREAIKYFVE------NDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKLMTETLALEY 184
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A   IRVN I PG +       K A     +     +P+  +G+  ++A  A +L S  
Sbjct: 185 -APKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQ 243
Query: 249 GKYVNGTTLIVDGGL 263
             YV G TL  DGG+
Sbjct: 244 ASYVTGITLFADGGM 258

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           MS ESPF    L   VA++TG  +GIG  I+  F K GASV +   + +  +A  +A+R 
Sbjct: 2   MSYESPFH---LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ 58
Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
            G KA+G E +V  ++H + V+++  + FGK+ +LVN A G       D+  + F     
Sbjct: 59  AGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGG-PKPFDMPMSDFEWAFK 117
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXI 180
           ++    F +   A  +++K            ILNIS+      +               +
Sbjct: 118 LNLFSLFRLSQLAAPHMQK-------AGGGAILNISSMAGENTNVRMASYGSSKAAVNHL 170
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
           TRN+A + G    IRVN IAPG I        L P EI      + PL +LGE  DIA A
Sbjct: 171 TRNIAFDVG-PMGIRVNAIAPGAIKTDALATVLTP-EIERAMLKHTPLGRLGEAQDIANA 228
Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
           AL+L S    +++G  L V GG
Sbjct: 229 ALFLCSPAAAWISGQVLTVSGG 250

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 19/260 (7%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFE 69
           +LKGKVAL+TG   GIG  I+    K GA+V +     +Q  +  V  ++ LG  A+   
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGT 126
            DV   E    +V+ T + FG++DILVN A     N L+    +    + TV++ +  G 
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMR---MKEEEWDTVINTNLKGV 117
Query: 127 FTMCHEAL-KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
           F +C +A+ +++ +            I+NI++ +  T +  Q +          +T+  A
Sbjct: 118 F-LCTKAVSRFMMRQRHGR-------IVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSA 169
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E  A  +I VN IAPG I     M  +  + I ++    +P  + GE  DIA A  +  
Sbjct: 170 KEL-ASRNITVNAIAPGFIA--TDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFA 226
Query: 246 SDTGKYVNGTTLIVDGGLWL 265
           SD  KY+ G TL VDGG+ +
Sbjct: 227 SDQSKYITGQTLNVDGGMVM 246

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 38/302 (12%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-----SLGIKA 65
           +L+G+VA++TGG +GIG  I  +  + G++V I  R+ + L +A   L+     +   + 
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +  + ++R +E    +V+ST + FGK++ LVN   G FL  AE +S  G+  V++ +  G
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
           TF MC        K            I+NI            +H          +T++LA
Sbjct: 135 TFYMCKAVYSSWMK-------EHGGSIVNIIVPTKAGFP-LAVHSGAARAGVYNLTKSLA 186
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-------MPLYKLGEKWDIA 238
           LEW     IR+N +APG I      ++ A +   S  + +       +P  ++G   +++
Sbjct: 187 LEWACS-GIRINCVAPGVI-----YSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS 240
Query: 239 MAALYLTSDTGKYVNGTTLIVDGGLWL-----SRPRH--LPKDA-----VKQLSRTVEKR 286
               +L S    ++ G ++ VDGG  L       P H   PK A     VK++  T +++
Sbjct: 241 SVVCFLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEK 300
Query: 287 SR 288
           ++
Sbjct: 301 AK 302

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 14/258 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGK+AL+TG   GIGF I++ + K GA++      ++++D  ++A ++ GI A G+  D
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++  + +V       G +DILVN A     V   +++   FR V+DID    F +  
Sbjct: 92  VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSK 151
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
             +  + K            I+NI + +                    +T+N+A E+G +
Sbjct: 152 AVIPSMIK-------KGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG-E 203
Query: 192 YDIRVNGIAPGPIG--DTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLT 245
            +I+ NGI PG I    T  + +L  D        ++    P  + GE  D+   A++L 
Sbjct: 204 ANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLA 263
Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD   +VNG  L VDGG+
Sbjct: 264 SDASNFVNGHILYVDGGI 281

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           LKGK  LITGG SGIG  +S  F K GA++AI    ++   +     +   G+K V   G
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNF------LVSAEDLSPNGFRTVMDIDSV 124
           D+  ++H K +V+ T    G L+ILVN  A  +       ++AE L    FR    I+  
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT-FR----INIF 159
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
             F +   AL +LK+            I+N ++ + Y  +   I            TR+L
Sbjct: 160 SYFHVTKAALSHLKQ---------GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSL 210
Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           +        IRVNG+APGPI  TP +     ++  S+    +P+ + G+ +++A A +YL
Sbjct: 211 SQSL-VQKGIRVNGVAPGPIW-TPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYL 268
Query: 245 TSDTGKYVNGTTLIVDGGLWLS 266
            S    YV G  + V+GG+ ++
Sbjct: 269 ASSDSSYVTGQMIHVNGGVIVN 290

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 7   FKADILK--GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK 64
           F +D L+  GK A+ITG G+GIG EI+  F   GASV +        +  V  ++ LG +
Sbjct: 2   FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           A     D+  ++    + +      GK+DILVN A G       D+    FR   +++  
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMPMADFRRAYELNVF 120
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
             F +       ++K            IL I++      +               + RN+
Sbjct: 121 SFFHLSQLVAPEMEK-------NGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNM 173
Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A + G + +IRVNGIAPG I  T  +  +   EI  K   + P+ +LG+  DIA AAL+L
Sbjct: 174 AFDLG-EKNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFL 231
Query: 245 TSDTGKYVNGTTLIVDGG 262
            S    +V+G  L V GG
Sbjct: 232 CSPAASWVSGQILTVSGG 249

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 23/262 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           LKGK  LITGG SGIG  +S  F K GA++AI    ++   +     +   G+K V   G
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNF------LVSAEDLSPNGFRTVMDIDSV 124
           D+  ++H K +V+ T    G L+ILVN  A  +       ++AE L    FR    I+  
Sbjct: 105 DLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKT-FR----INIF 159
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
             F +   AL +LK+            I+N ++ + Y  +   I            TR+L
Sbjct: 160 SYFHVTKAALSHLKQ---------GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSL 210
Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           +        IRVNG+APGPI  TP +     ++  S+    +P  + G+ +++A A +YL
Sbjct: 211 SQSL-VQKGIRVNGVAPGPIW-TPLIPSSFDEKKVSQFGSNVPXQRPGQPYELAPAYVYL 268
Query: 245 TSDTGKYVNGTTLIVDGGLWLS 266
            S    YV G  + V+GG+ ++
Sbjct: 269 ASSDSSYVTGQXIHVNGGVIVN 290

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 20/256 (7%)
Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
           + KVAL+TG G GIG EI+    K  + V  + R ++  D+ V  ++S G ++ G+ GDV
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102
Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
            ++E   +V+         +DILVN A       FL    D   +  RT ++        
Sbjct: 103 SKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLN-------- 154
Query: 129 MCHEALKYLKK-XXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
               +L Y+ +             I+NIS+ +  T +  Q +           T++LA E
Sbjct: 155 ----SLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKE 210
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A  +I VN IAPG I  +  M     ++I       +P  ++G   ++A  A +L+SD
Sbjct: 211 L-ASRNITVNAIAPGFI--SSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSD 267
Query: 248 TGKYVNGTTLIVDGGL 263
              Y+NG   ++DGGL
Sbjct: 268 KSGYINGRVFVIDGGL 283

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 119/253 (47%), Gaps = 9/253 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
            +GKVA ITGGG+G+G  ++T     GA   I  R+  VL A    + S  G K    + 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DVR  +  +  V    +  G  +I++N AAGNF+   E LSPN ++T+ DI   GT  + 
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            E  K L K             L+I+     T S + +           ++++LA EWG 
Sbjct: 144 LEIGKQLIK------AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG- 196
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR-DYMPLYKLGEKWDIAMAALYLTSDTG 249
            Y +R N I PGPI      ++L P     K     +P  +LG   ++A  A +L SD  
Sbjct: 197 KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYA 256
Query: 250 KYVNGTTLIVDGG 262
            ++NG  +  DGG
Sbjct: 257 SWINGAVIKFDGG 269

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+G  AL+TGG  GIG+ I  +    GASV    R ++ L+  ++  RS G K      D
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  +   ++++ +   HF GKL+ILVN A       A+D +   +  +M I+    + + 
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 126
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A  +LK             ++ IS+     A  Y+            +TR LA EW  
Sbjct: 127 VLAHPFLK-------ASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179
Query: 191 DYDIRVNGIAPGPIGDT-PGMNKLAPDEIN--SKARDYMPLYKLGEKWDIAMAALYLTSD 247
           D +IRVNG+ PG I  +   M    P++    +K  D   L ++GE  ++A    +L   
Sbjct: 180 D-NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFP 238
Query: 248 TGKYVNGTTLIVDGGL 263
              YV G  + VDGGL
Sbjct: 239 AASYVTGQIIYVDGGL 254

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+G  AL+TGG  GIG+ I  +    GASV    R ++ L+  ++  RS G K      D
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  +   ++++ +   HF GKL+ILVN A       A+D +   +  +M I+    + + 
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A  +LK             ++ IS+     A  Y+            +TR LA EW  
Sbjct: 126 VLAHPFLK-------ASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 178
Query: 191 DYDIRVNGIAPGPIGDT-PGMNKLAPDEIN--SKARDYMPLYKLGEKWDIAMAALYLTSD 247
           D +IRVNG+ PG I  +   M    P++    +K  D   L ++GE  ++A    +L   
Sbjct: 179 D-NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFP 237
Query: 248 TGKYVNGTTLIVDGGL 263
              YV G  + VDGGL
Sbjct: 238 AASYVTGQIIYVDGGL 253

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 9/253 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
            +GKVA ITGGG+G+G   +T     GA   I  R+  VL A    + S  G K    + 
Sbjct: 24  FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQC 83
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DVR  +  +  V    +  G  +I++N AAGNF+   E LSPN ++T+ DI   GT  + 
Sbjct: 84  DVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 143
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            E  K L K             L+I+     T S + +            +++LA EWG 
Sbjct: 144 LEIGKQLIK------AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWG- 196
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR-DYMPLYKLGEKWDIAMAALYLTSDTG 249
            Y  R N I PGPI      ++L P     K     +P  +LG   ++A  A +L SD  
Sbjct: 197 KYGXRFNVIQPGPIKTKGAFSRLDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLCSDYA 256
Query: 250 KYVNGTTLIVDGG 262
            ++NG  +  DGG
Sbjct: 257 SWINGAVIKFDGG 269

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  K+A+ITG  SGIG   + +F   GA V I GRRK VLDAA++    +G  AVG + D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA---EIGGGAVGIQAD 83
Query: 72  VRRQEHAKKVVESTFEHFGKLDIL-VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
                   ++ E      G++D+L VNA  G+ L   E ++   +    D +  G     
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGE-VTEEQYDDTFDRNVKGVLFTV 142
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            +AL  L +                 A   Y AS   +             RN  L+   
Sbjct: 143 QKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALR---------SFARNWILDL-K 192
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDE-------INSKARDYMPLYKLGEKWDIAMAALY 243
           D  IR+N ++PGP  +T G+ +LA  +       +N+ A   +P  ++G   ++A AAL+
Sbjct: 193 DRGIRINTLSPGPT-ETTGLVELAGKDPVQQQGLLNALAAQ-VPXGRVGRAEEVAAAALF 250
Query: 244 LTSDTGKYVNGTTLIVDGG 262
           L SD   +V G  L VDGG
Sbjct: 251 LASDDSSFVTGAELFVDGG 269

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L+GKV+L+TG   GIG  I+ +    G++V I G   +   A    +    G+KA G E 
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGN----FLVSAEDLSPNGFRTVMDIDSVGT 126
           ++  +E   K  E  +     +DILVN A       FL     +S   +  V+ ++  GT
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFL----RMSLLDWEEVLKVNLTGT 120
Query: 127 FTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLAL 186
           F +   +L+ + K            I+NIS+ + +T +  Q++           T++LA 
Sbjct: 121 FLVTQNSLRKMIKQRWGR-------IVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAK 173
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E  A  ++ VN +APG I     M  +  +EI  K ++ +PL + G   ++A   L+L S
Sbjct: 174 EL-APRNVLVNAVAPGFI--ETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCS 230
Query: 247 DTGKYVNGTTLIVDGGLW 264
           +   Y+ G  + V+GG++
Sbjct: 231 ELASYITGEVIHVNGGMF 248

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 13/254 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI--KAVGFE 69
           L GKVA+ITGG  GIG  I+T+F + GA V I GR     D    A +S+G   +   F+
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS---DVGEKAAKSVGTPDQIQFFQ 60
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            D   ++   K+ ++T + FG +  LVN A      S E+ +   +R ++ ++  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
               ++ +K             I+N+S+   +                  ++++ AL+  
Sbjct: 121 TRLGIQRMKN------KGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 190 -ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
             DYD+RVN + PG I  TP ++ L   E     R   P+  +GE  DIA   +YL S+ 
Sbjct: 175 LKDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE 233
Query: 249 GKYVNGTTLIVDGG 262
            K+  G+  +VDGG
Sbjct: 234 SKFATGSEFVVDGG 247

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 10/255 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  +VA++TG   GIG  I+ +  + GA V      +   +   +A +  G++  G   +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V        +VEST + FG L++LVN A       A  +  + +  V+D +    F +  
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR 145
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
             L+ + K            I+NI++ +    +  Q++          +TR LA E G+ 
Sbjct: 146 AVLRPMMK-------ARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGS- 197
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             I VN +APG I DT  M K  P E  +  +  +PL +LG   DIA A  +L S    Y
Sbjct: 198 RGITVNCVAPGFI-DTD-MTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGY 255
Query: 252 VNGTTLIVDGGLWLS 266
           + GTTL V+GG+++S
Sbjct: 256 ITGTTLHVNGGMFMS 270

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           K AL+TG   GIG  I+ Q  + G +VA+     K+  +A V  +++ G+ +   + +V 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
             +  K +++     FG LD+LVN A     N L+    +    +  V+D +  G F   
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMR---MKEQEWDDVIDTNLKGVFNCI 127
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            +A   + +            I+N+S+ +    +  Q +          +T++ A E  A
Sbjct: 128 QKATPQMLRQRSGA-------IINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAREL-A 179
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
              I VN +APG I     M     DE+  +    +PL + G+  DIA    +L SD  K
Sbjct: 180 SRGITVNAVAPGFI--VSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK 237
Query: 251 YVNGTTLIVDGGLWL 265
           Y+ G T+ V+GG+++
Sbjct: 238 YITGQTIHVNGGMYM 252

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 11/255 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEG 70
           LKGK A++TG   G+G  I+ + G  GA++ + G      LDA     ++ GI  V  +G
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV+  E  + +V++  + FG++DILVN A          +S   +  V++ +    + +C
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAY-LC 121
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            +A+  +              I+NI++      +  Q +           T+++A E+ A
Sbjct: 122 TKAVSKI------MLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
              I  N +APG I     M  + PD++     + +PL + G   ++A    +L SD   
Sbjct: 176 K-GIYCNAVAPGII--KTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSN 232
Query: 251 YVNGTTLIVDGGLWL 265
           Y+ G  + +DGGL +
Sbjct: 233 YITGQVINIDGGLVM 247

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 123/259 (47%), Gaps = 20/259 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVALITG GSG G  ++ +F K GA V I+ R K     A      +G  A+    D
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKA---GAERVAGEIGDAALAVAAD 63
Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           + ++      VE+    FGK+DILV NA  G+   +AE + P  F  ++ ++  G + M 
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISAT----LHYTASWYQIHXXXXXXXXXXITRNLAL 186
            + + + K+            ILN+++T         +WY             +T+ LA+
Sbjct: 124 SKLIPHFKE---NGAKGQECVILNVASTGAGRPRPNLAWYN----ATKGWVVSVTKALAI 176
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLA---PDEINSKARDYMPLYKLGEKWDIAMAALY 243
           E  A   IRV  + P   G+TP +        +EI  K RD +P+ +L +  D+A AA +
Sbjct: 177 EL-APAKIRVVALNP-VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAF 234
Query: 244 LTSDTGKYVNGTTLIVDGG 262
           L S     + G  L VDGG
Sbjct: 235 LCSPQASMITGVALDVDGG 253

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 9/256 (3%)
Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVG 67
           + D L  KVAL+T    GIGF I+ +  + GA V +  R++Q +D AV+ L+  G+   G
Sbjct: 9   RRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTG 68
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGT 126
               V + E  +++V +  +  G +DILV NAA   F  S  D++   +   +DI+    
Sbjct: 69  TVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAP 128
Query: 127 FTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLAL 186
             M    +  ++K            ++ +S+   ++ S               +T+ LA+
Sbjct: 129 ALMTKAVVPEMEK-------RGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 181
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E  A  +IRVN +APG I  +         E     ++ + + +LGE  D A    +L S
Sbjct: 182 EL-APRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCS 240
Query: 247 DTGKYVNGTTLIVDGG 262
           +   Y+ G T++V GG
Sbjct: 241 EDASYITGETVVVGGG 256

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 13/254 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI--KAVGFE 69
           L GKVA+ITGG  GIG  I+T+F + GA V I  R     D    A +S+G   +   F+
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHS---DVGEKAAKSVGTPDQIQFFQ 60
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            D   ++   K+ ++T + FG +  LVN A      S E+ +   +R ++ ++  G F  
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFG 120
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
               ++ +K             I+N+S+   +                  ++++ AL+  
Sbjct: 121 TRLGIQRMKN------KGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 190 -ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
             DYD+RVN + PG I  TP ++ L   E     R   P+  +GE  DIA   +YL S+ 
Sbjct: 175 LKDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE 233
Query: 249 GKYVNGTTLIVDGG 262
            K+  G+  +VDGG
Sbjct: 234 SKFATGSEFVVDGG 247

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 21/266 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L+GKVAL+TG G GIG E++ + G+ G  V +      +  +  V+A++  G  A   + 
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +V   E   ++ E   + FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            EA K+L+             IL  S T    A                  R +A++  A
Sbjct: 147 REAYKHLE--------IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM-A 197
Query: 191 DYDIRVNGIAPGPIGD----------TPGMNKLAPDEINS-KARDYMPLYKLGEKWDIAM 239
           D  I VN +APG I             P    L+ +E++   A  + PL ++G   DIA 
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR 257
Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWL 265
              +L S+ G +V G  + +DGG  +
Sbjct: 258 VVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 21/266 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L+GKVAL+TG G GIG E++ + G+ G  V +      +  +  V+A++  G  A   + 
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +V   E   ++ E   + FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            EA K+L+             IL  S T    A                  R +A++  A
Sbjct: 147 REAYKHLE--------IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM-A 197
Query: 191 DYDIRVNGIAPGPIGD----------TPGMNKLAPDEINS-KARDYMPLYKLGEKWDIAM 239
           D  I VN +APG I             P    L+ +E++   A  + PL ++G   DIA 
Sbjct: 198 DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIAR 257
Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWL 265
              +L S+ G +V G  + +DGG  +
Sbjct: 258 VVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 113/258 (43%), Gaps = 23/258 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            + KV ++TG G GIG   +    + GA+V +     +  +A    + + G  A+    D
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA------GNFLVSAEDLSPNGFRTVMDIDSVG 125
           V   E AK + + T   FG +D LVN AA       +FL++   + P  ++  M ++  G
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLT---IDPEYYKKFMSVNLDG 123
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNL 184
                    K + K            I+N S+    TA+W Y  +          +T+ L
Sbjct: 124 ALWCTRAVYKKMTK-------RGGGAIVNQSS----TAAWLYSNYYGLAKVGINGLTQQL 172
Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           + E G   +IR+N IAPGPI DT       P E+       +PL ++G   D+    L+L
Sbjct: 173 SRELGG-RNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFL 230
Query: 245 TSDTGKYVNGTTLIVDGG 262
            SD   ++ G    VDGG
Sbjct: 231 LSDEASWITGQIFNVDGG 248

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 7   FKADILK--GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGI 63
           F+++ ++  GK  LITG   GIG EI+      G  V I  R   +V DA  + L   G 
Sbjct: 20  FQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGY 79
Query: 64  KAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDS 123
           KA   + D   +    + +++  +  G L  LVN A       A  +    F  V+D + 
Sbjct: 80  KAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNL 139
Query: 124 VGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRN 183
              F  C EALK + K            ++N+++ +    +  Q +          ++++
Sbjct: 140 TSAFIGCREALKVMSKSRFGS-------VVNVASIIGERGNMGQTNYSASKGGMIAMSKS 192
Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
            A E GA  +IR N + PG I     MN    DE+ +     +PL +LG   ++A A  +
Sbjct: 193 FAYE-GALRNIRFNSVTPGFI--ETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAF 249
Query: 244 LTSDTGKYVNGTTLIVDGGLWL 265
           L SD   Y+ G TL V+GGL++
Sbjct: 250 LLSDHSSYITGETLKVNGGLYM 271

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           K AL+TG   GIG  I+ Q  + G +VA+     K+  +A V  +++ G+ +   + +V 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
             +  K  ++     FG LD+LVN A     N L   ++     +  V+D +  G F  C
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQE---WDDVIDTNLKGVFN-C 120
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
                 ++K            I+N+S+ +    +  Q +          +T++ A E  A
Sbjct: 121 ------IQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAREL-A 173
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
              I VN +APG I           DE+  +    +PL + G+  DIA    +L SD  K
Sbjct: 174 SRGITVNAVAPGFI--VSDXTDALSDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAK 231
Query: 251 YVNGTTLIVDGGLW 264
           Y+ G T+ V+GG +
Sbjct: 232 YITGQTIHVNGGXY 245

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 117/255 (45%), Gaps = 11/255 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK KV ++TG GSGIG  I+ +F  + + V  +   +  L+  V  LR +G + +G + D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V +++  ++ V  TFE + ++D+L  NA   + +    ++S   +  V+ ++    F   
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
              +  + K            I+N ++       +              +TR++A  +G 
Sbjct: 125 RAVIPIMLK-------QGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG- 176
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYMPL-YKLGEKWDIAMAALYLTSDT 248
           D  IR   + PG +    G+    P E+  +     M L  +L E  DIA   ++L SD 
Sbjct: 177 DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDE 236
Query: 249 GKYVNGTTLIVDGGL 263
             +VNG  ++VDGGL
Sbjct: 237 ASFVNGDAVVVDGGL 251

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 24/263 (9%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR---KQVLDAAVSALRSLGIKAVG 67
           +  GK  L+TGG  GIG  I+  F + GA VA+   R   K+V +A         I    
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA---------IGGAF 53
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           F+ D+  +    + VE      G++D+LVN AA     SA  +    +R V++++     
Sbjct: 54  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPM 113
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +   A + ++K            I+N+++     A                +TR+LAL+
Sbjct: 114 HLSALAAREMRKVGGGA-------IVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALD 166
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLA----PDEINSKARDYMPLYKLGEKWDIAMAALY 243
             A   IRVN +APG I     +  +A    P+       D   L +LG+  ++A A L+
Sbjct: 167 L-APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF 225
Query: 244 LTSDTGKYVNGTTLIVDGGLWLS 266
           L S+   ++ G  L VDGG+  S
Sbjct: 226 LASEKASFITGAILPVDGGMTAS 248

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 110/256 (42%), Gaps = 12/256 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEG 70
           L+G+  ++TGG  GIG  I+T F + GA+VA+ GR    +DA V+ L  LG  K +G + 
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTM 129
           DV  +     +     E FG +D+ V A AG F       ++P     +  ++  GTF  
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDV-VCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYA 126
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
               L  L              +L  S T   T      H            R  A+E  
Sbjct: 127 VQACLDAL------IASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIEL- 179
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A + I VN I PG I  T G+ +   + I S AR  +P   LG   DI   A +L +   
Sbjct: 180 APHKITVNAIMPGNI-MTEGLLENGEEYIASMARS-IPAGALGTPEDIGHLAAFLATKEA 237
Query: 250 KYVNGTTLIVDGGLWL 265
            Y+ G  + VDGG  L
Sbjct: 238 GYITGQAIAVDGGQVL 253

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 16/263 (6%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F++  L+GKVAL+TG   GIG  I+ + G+ GA V          +     L++ G++  
Sbjct: 20  FQSMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA 79
Query: 67  GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDS 123
           G   DV   E     +E   +H G+  I+VN A     N LV  +D   + +  V++ + 
Sbjct: 80  GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKD---DEWFDVVNTNL 136
Query: 124 VGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRN 183
              + +    L+ + K            I+NI + +    +  Q +           TR 
Sbjct: 137 NSLYRLSKAVLRGMTK-------ARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRA 189
Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           LA E G+   I VN +APG I DT  M +  P+         +PL +LG+  +IA    +
Sbjct: 190 LAREVGSRA-ITVNAVAPGFI-DTD-MTRELPEAQREALLGQIPLGRLGQAEEIAKVVGF 246
Query: 244 LTSDTGKYVNGTTLIVDGGLWLS 266
           L SD   YV G T+ V+GG+++S
Sbjct: 247 LASDGAAYVTGATVPVNGGMYMS 269

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 27/276 (9%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F++  L  +V ++TGGGSGIG   +  F K+GA V +    +   DAAV     +G KA 
Sbjct: 20  FQSXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE---DAAVRVANEIGSKAF 76
Query: 67  GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDID 122
           G   DV   + A+  VE T   +G++D+LVN A     GN +   E+     +  +  ++
Sbjct: 77  GVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET----WDRIXSVN 132
Query: 123 SVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITR 182
             G F      +   ++            I+N ++    +A   +            +TR
Sbjct: 133 VKGIFLCSKYVIPVXRR-------NGGGSIINTTSYTATSAIADRTAYVASKGAISSLTR 185
Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKL-----APDEINSKARDYMPLYKLGEKWDI 237
             A +  A   IRVN +APG I D+P   K+      P ++ S         + G   +I
Sbjct: 186 AXAXDH-AKEGIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEI 243
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPK 273
           A A L+L SD  ++  G+ L VDGG  +    HL K
Sbjct: 244 AEAXLFLASDRSRFATGSILTVDGGSSIG--NHLVK 277

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA-AVSALRSLGIKA 65
           F+ DI  G+  L+TGG SGIG  I+ QF + GA V  +G     LDA  V A R      
Sbjct: 4   FQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALG-----LDADGVHAPR------ 52
Query: 66  VGFEGDVRRQE---HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
                 +RR+E      + ++  FE   +LD+LVN A  +      DL+   F  V+ ++
Sbjct: 53  ---HPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLAT--FERVLRLN 107
Query: 123 SVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITR 182
                     A   L +            ILNI++      S  +            +TR
Sbjct: 108 LSAAMLASQLARPLLAQRGGS--------ILNIASMYSTFGSADRPAYSASKGAIVQLTR 159
Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAA 241
           +LA E+ A+  IRVN IAPG I DTP    L  D E   +     PL + GE  ++A AA
Sbjct: 160 SLACEYAAER-IRVNAIAPGWI-DTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAA 217
Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
            +L      +V G  L VDGG
Sbjct: 218 AFLCGPGASFVTGAVLAVDGG 238

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 20/268 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K  L+TGG  GIG  I  +F   GA +    R +  L+  +S  +  G +  G   D
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 72  VRRQEHAKKVVESTFEHFG-KLDILVNAAAG-----NFLVSAEDLSPNGFRTVMDIDSVG 125
              +   +K++++    FG KLDIL+N             +AED S   F    +++S  
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS---FHISTNLESAY 128
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
             +     L                 +++ S    Y+A+   ++          + RNLA
Sbjct: 129 HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQ---------LARNLA 179
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            EW +D  IR N +AP  I  TP    +  DE         PL + GE  +++    +L 
Sbjct: 180 CEWASD-GIRANAVAPAVIA-TPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC 237
Query: 246 SDTGKYVNGTTLIVDGGLWLSRPRHLPK 273
                Y+ G T+ VDGGL ++   + P+
Sbjct: 238 MPAASYITGQTICVDGGLTVNGFSYQPQ 265

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 24/259 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K+A+ITGG +GIG  I+ +F   GA +AI          A +A+R+LG + +  + D
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 62
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +    +   +     FG+ DILVN A    L+  ++L+   ++   +I+    F M  
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
             +  +K+            I+N+++T ++       H           TR LA + G D
Sbjct: 123 AFVPGMKR-------NGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD 175
Query: 192 YDIRVNGIAPGPI-------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
             I VN IAP  +            M  + P+ + +  R  +PL       D+  AA +L
Sbjct: 176 -GITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPL-------DLTGAAAFL 227
Query: 245 TSDTGKYVNGTTLIVDGGL 263
            SD   ++ G TL VDGG+
Sbjct: 228 ASDDASFITGQTLAVDGGM 246

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 23/260 (8%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA--VGFEGDV 72
           +V LITGGGSG+G   + +    GA ++++    + L+A+ +A+      A  +    DV
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV 73
Query: 73  RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
             +   +  V +T E FG++D    NA         E  +   F  V+ I+  G F    
Sbjct: 74  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133
Query: 132 EALKYLKKXXXXXXXXXXXX--ILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
           + LK +++              I  I     Y A+ + +           +TRN A+E+G
Sbjct: 134 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV---------VGLTRNSAVEYG 184
Query: 190 ADYDIRVNGIAPGPIGDTP----GMNKLAPDEINSKARDYM---PLYKLGEKWDIAMAAL 242
             Y IR+N IAPG I  TP     M +L P+     A +++   P  + GE  +IA    
Sbjct: 185 -RYGIRINAIAPGAIW-TPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVA 242
Query: 243 YLTSDTGKYVNGTTLIVDGG 262
           +L SD   YVN T + +DGG
Sbjct: 243 FLLSDDASYVNATVVPIDGG 262

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 20/262 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL+TG G GIG  ++   G+ GA V +      +  +  VS +++LG  A+  + 
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+R+     K+ +    HFG LDI V+ +        +D++   F  V  +++ G F + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            EA ++L +            + + + +  ++   + ++          + R  + + G 
Sbjct: 136 REAYRHLTE-------GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFV-RIFSKDCG- 186
Query: 191 DYDIRVNGIAP-GPIGD---------TPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
           D  I VN +AP G + D          P       ++    A    PL++ G   D+A  
Sbjct: 187 DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANV 246
Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
             +L S  G++VNG  L +DGG
Sbjct: 247 VGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 108/256 (42%), Gaps = 12/256 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEG 70
           L  +  L+TGG  GIG  I+T F + GA+VA+  R  + L +  + L  LG    +G   
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAED-LSPNGFRTVMDIDSVGTFTM 129
           DV           +  + FG LD+ V A AG F  +  D ++P     V+D++  GT   
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDV-VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYT 157
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
               L  L              IL  S T   T      H            R  A+E  
Sbjct: 158 VQACLAPLTA------SGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIEL- 210
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A   + VN I PG I  T G+  +  + I+  AR  +P+  LG   DI   A +L +D  
Sbjct: 211 APRGVTVNAILPGNI-LTEGLVDMGEEYISGMARS-IPMGMLGSPVDIGHLAAFLATDEA 268
Query: 250 KYVNGTTLIVDGGLWL 265
            Y+ G  ++VDGG  L
Sbjct: 269 GYITGQAIVVDGGQVL 284

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 20/262 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL+TG G GIG  ++   G+ GA V +      +  +  VS +++LG  A+  + 
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+R+     K+ +    HFG LDI V+ +        +D++   F  V  +++ G F + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            EA ++L +            +L  S T    +                  R  + + G 
Sbjct: 136 REAYRHLTE--------GGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCG- 186
Query: 191 DYDIRVNGIAP-GPIGD---------TPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
           D  I VN +AP G + D          P       ++    A    PL++ G   D+A  
Sbjct: 187 DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANV 246
Query: 241 ALYLTSDTGKYVNGTTLIVDGG 262
             +L S  G++VNG  L +DGG
Sbjct: 247 VGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 23/267 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA------ 65
           L+  +AL+TG GSGIG  +S +    GA+VA     +      V  L   G K       
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 66  -VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLVSAEDLSPNGFRTVMD 120
              F+ DV     A+ ++E     F +   +V + AG     FL+    +S + +  V+ 
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLL---HMSEDDWDKVIA 121
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXI 180
           ++  GTF +   A + L              I+NIS+ +    +  Q +          +
Sbjct: 122 VNLKGTFLVTQAAAQAL------VSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGL 175
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
           T+  A E G  + IR N + PG I  TP M +  P ++  K  + +P+  LG+  D+A  
Sbjct: 176 TQTAARELG-RHGIRCNSVLPGFIA-TP-MTQKVPQKVVDKITEMIPMGHLGDPEDVADV 232
Query: 241 ALYLTSDTGKYVNGTTLIVDGGLWLSR 267
             +L S+   Y+ GT++ V GGL+++ 
Sbjct: 233 VAFLASEDSGYITGTSVEVTGGLFMAE 259

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 81.3 bits (199), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 14/260 (5%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ 75
           VALITG GSGIG   +      G +V  +GR +  ++     +   G +A+  E DV  +
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 76  EHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
              +  V      FG LDI+V NA         +DL P  +   + ++  GTF   H  +
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
            YLK+            + +I+ T  +T                 I + LALE G  + I
Sbjct: 150 PYLKQ----RGGGAIVVVSSINGTRTFTTPGAT-AYTATKAAQVAIVQQLALELG-KHHI 203
Query: 195 RVNGIAPGPIGDTPGMN-KLAPDEINSKARDY----MPLY--KLGEKWDIAMAALYLTSD 247
           RVN + PG I      N KL  +E  +   ++    +P+   + G   D+A    +L S+
Sbjct: 204 RVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263
Query: 248 TGKYVNGTTLIVDGGLWLSR 267
             ++V G+ + +DGG  L R
Sbjct: 264 RARHVTGSPVWIDGGQGLLR 283

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 13/255 (5%)
Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSAL-RSLGIKAVG 67
           LKGKV ++TG  G  G+G E +    + GA+VAI    R Q  +  V  L ++ GIKA  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           ++  V   E  +K+V+     FG++D  +  A         D S   +  V+ +D  GTF
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF 137
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
             C +A+ +  K            +    A      + Y +           + R+LA E
Sbjct: 138 -HCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNV----AKAGCIHMARSLANE 192
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           W  D+  RVN I+PG I DT G++   P E        +P+ + G   ++  A +Y  SD
Sbjct: 193 W-RDF-ARVNSISPGYI-DT-GLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASD 248
Query: 248 TGKYVNGTTLIVDGG 262
              Y  G  L++DGG
Sbjct: 249 ASTYTTGADLLIDGG 263

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KVA+ITG   GIG E S    + GA V +    +  L  A +   S+G  AV    D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAA---SVGRGAVHHVVD 65
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           +  +   + +++ T + FG+LDI+ N AA     + LV+   ++ + +     +++ GT 
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVT--QMTVDVWDDTFTVNARGTM 123
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            MC  A+  L              I+NIS+   + A                +TR +A +
Sbjct: 124 LMCKYAIPRL-------ISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQ 176
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           +G  + +R N IAPG +  TP +    P  I      +    ++GE  +IA    +L SD
Sbjct: 177 YG-RHGVRCNAIAPGLV-RTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASD 234
Query: 248 TGKYVNGTTLIVDGGLWLSRPRHLP 272
              ++ G  +  D GL      HLP
Sbjct: 235 RAAFITGQVIAADSGLL----AHLP 255

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGR--------RKQVLDAAVSALRSLGIKAV 66
           KVA+ITG  +GIG   +  F + GA V I GR        R+Q+L A VS      + A 
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVA- 65
Query: 67  GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV-G 125
               DV       +++ +T   FGKLDILVN A        +  S  G  T   I+S   
Sbjct: 66  ----DVTTDAGQDEILSTTLGKFGKLDILVNNAGAAI---PDSQSKTG--TAQSIESYDA 116
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISAT---LHYTAS--WYQIHXXXXXXXXXXI 180
           T  +   ++  L K            I+NIS+    LH T    +Y I            
Sbjct: 117 TLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSI----AKAAIDQY 172
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK-------ARDYMPLYKLGE 233
           TRN A++    + IRVN I+PG +    G     P+E + K        ++ +P   +G+
Sbjct: 173 TRNTAIDL-IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQ 231
Query: 234 KWDIAMAALYLTS-DTGKYVNGTTLIVDGGLWL 265
             DIA    +L    T  Y+ G  L+VDGG  L
Sbjct: 232 PQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL 264

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 26/245 (10%)
Query: 45  GRRKQVLDAAVSALRSLGIK---AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAG 101
           G R  + D   S  R+L  +   AV    DV +++  K +V  T   FG+LD +VN A  
Sbjct: 33  GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGH 92
Query: 102 NFLVS-AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLH 160
           +      E+ S  GFR +++++ +GT+T+   AL YL+K            ++NIS+ + 
Sbjct: 93  HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK--------SQGNVINISSLVG 144
Query: 161 YTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---PDE 217
                  +           +T+ LAL+  + Y +RVN I+PG I  TP   +LA   PD 
Sbjct: 145 AIGQAQAVPYVATKGAVTAMTKALALDE-SPYGVRVNCISPGNIW-TPLWEELAALMPDP 202
Query: 218 INSKARDYM---PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL----SRPRH 270
             +  R+ M   PL ++G+  ++  AA++L S+   +  G  L+V GG  L       R 
Sbjct: 203 -RASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAELGYGCKASRS 260
Query: 271 LPKDA 275
            P DA
Sbjct: 261 TPVDA 265

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 18/256 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK ALITG  +GIG +++  + + GA VA+  R    L      +  +G KA+    D
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V + +  + +++      G +DI V  A    + +  D+    F+ + D +  G F    
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ 149
Query: 132 EALKYLKKX----XXXXXXXXXXXILNISATL-HYTASWYQIHXXXXXXXXXXITRNLAL 186
            A + +                  I+NI   + HY  S   +           +T+ +A+
Sbjct: 150 AAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAV---------VHLTKAMAV 200
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E  A + IRVN ++PG I  T  +  LA  + ++     +PL ++G   ++    LYL S
Sbjct: 201 EL-APHQIRVNSVSPGYI-RTELVEPLA--DYHALWEPKIPLGRMGRPEELTGLYLYLAS 256
Query: 247 DTGKYVNGTTLIVDGG 262
               Y+ G+ +++DGG
Sbjct: 257 AASSYMTGSDIVIDGG 272

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 14/252 (5%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD-AAVSALRSLGIKAVGFEGDVR 73
           +VA++TG  SG G  I+T+F   G  VA +    + L+  A +   +   K +    DV 
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAA--AGNFLVSAEDLSP-NGFRTVMDIDSVGTFTMC 130
            +      + +T E FG +D+LVN A   GN        +P   F  VM ++  G F  C
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
              L ++              I+NI++     A   +            +T+++A+++ A
Sbjct: 123 RAVLPHM-------LLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY-A 174
Query: 191 DYDIRVNGIAPGPIGDTPGMN-KLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
              IR N + PG I +TP    +L   E+  +    +P  ++G    +A A ++L  +  
Sbjct: 175 GSGIRCNAVCPGMI-ETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDA 233
Query: 250 KYVNGTTLIVDG 261
            YVNG  L++DG
Sbjct: 234 TYVNGAALVMDG 245

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 31/263 (11%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ AL+TG   G+G  I+      GA V + G R++ L    +    LG +   F  +
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAA---ELGERIFVFPAN 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFL-VSAEDLSPNGFRTVMDIDSVGT 126
           +  +E  K + +   E  G +DILVN A     G F+ +S ED     +  V+ ++    
Sbjct: 65  LSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED-----WDAVLTVNLTSV 119
Query: 127 FTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLAL 186
           F +  E    + +            I+NI++ +  T +  Q +           +++LA 
Sbjct: 120 FNLTRELTHPMMRRRNGR-------IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQ 172
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAAL 242
           E  A  ++ VN IAPG I            ++N K +D +    P+ ++G   DIA A +
Sbjct: 173 EI-ASRNVTVNCIAPGFI------ESAMTGKLNEKQKDAIMGNIPMKRMGVGADIAAAVV 225
Query: 243 YLTSDTGKYVNGTTLIVDGGLWL 265
           YL SD   YV G TL V+GG+ +
Sbjct: 226 YLASDEAAYVTGQTLHVNGGMAM 248

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 112/262 (42%), Gaps = 20/262 (7%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA-LRSLGIKA 65
           F++     KVA++TG   GIG  I+ +    G +V I    K      V+  + + G KA
Sbjct: 20  FQSXXETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKA 79
Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
           +  + DV      +++  +  E FG +D+LVN A    L +  +     F  V+ ++  G
Sbjct: 80  LTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKG 139
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISAT----LHYTASWYQIHXXXXXXXXXXIT 181
           TF    EA + L+             I+N S +    LH +   Y             ++
Sbjct: 140 TFNTLREAAQRLR---------VGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLS 190
Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           + L        DI VN +APGP   T    +   DE+  +     PL +LG   DIA A 
Sbjct: 191 KELR-----GRDITVNAVAPGPTA-TDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAV 244
Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L    G +VNG  L  +GG+
Sbjct: 245 AFLAGPDGAWVNGQVLRANGGI 266

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KV ++TG   GIG  I+ +F   G+         +V+D ++        K    E D
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGS---------KVIDLSIHDPGEA--KYDHIECD 54
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  K  ++  F+ +G + +LVN A        E +S   +R ++D++  G +    
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
            A+ Y+ +            I+NIS+      +               +T+++AL++   
Sbjct: 115 FAIPYMIRSRDPS-------IVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL 167
Query: 192 YDIRVNGIAPGPIGDTPGMNKLA-------PDEINSKARDY---MPLYKLGEKWDIAMAA 241
             +R N + P  I DTP + K A       P  I  K  ++    P+ ++G+  ++A A 
Sbjct: 168 --LRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAV 224
Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPK 273
            +L S    ++ GT L VDGGL +  P   P+
Sbjct: 225 AFLASREASFITGTCLYVDGGLSIRAPISTPE 256

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 77.4 bits (189), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 31/263 (11%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ AL+TG   G+G  I+      GA V + G R++ L    +    LG +   F  +
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAA---ELGERIFVFPAN 61
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFL-VSAEDLSPNGFRTVMDIDSVGT 126
           +  +E  K + +   E  G +DILVN A     G F+ +S ED     +  V+ ++    
Sbjct: 62  LSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDED-----WDAVLTVNLTSV 116
Query: 127 FTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLAL 186
           F +  E    + +            I+NI++ +  T +  Q +           +++LA 
Sbjct: 117 FNLTRELTHPMMRRRNGR-------IINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQ 169
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAAL 242
           E  A  ++ VN IAPG I            ++N K +D +    P+ ++G   DIA A +
Sbjct: 170 EI-ASRNVTVNCIAPGFI------ESAMTGKLNEKQKDAIMGNIPMKRMGVGADIAAAVV 222
Query: 243 YLTSDTGKYVNGTTLIVDGGLWL 265
           YL SD   YV G TL V+GG+ +
Sbjct: 223 YLASDEAAYVTGQTLHVNGGMAM 245

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 15/258 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKG  AL+TGG  GIG+ I  +    GA V    R ++ LD  +   R  G+   G   D
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  +    K++++    F GKL+ILVN A       A+D +   +  +M  +    + + 
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 138
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A   LK             ++ +S+   ++A                +T++LA EW  
Sbjct: 139 QIAYPLLK-------ASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAK 191
Query: 191 DYDIRVNGIAPG----PIGDTP-GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
           D +IRVN +APG    P+ +T    N    +EI++      P+ + G+  +++    +L 
Sbjct: 192 D-NIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK-TPMGRAGKPQEVSALIAFLC 249
Query: 246 SDTGKYVNGTTLIVDGGL 263
                Y+ G  +  DGG 
Sbjct: 250 FPAASYITGQIIWADGGF 267

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA-AVSAL-RSLGIKAVGFE 69
           LK + AL+TGG SGIG   +  + + GA VAI     +  DA  V AL    G KAV   
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFT 128
           GD+  +  A+ +V    E  G LDIL   A     +   +DL+   F+    ++    F 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
           +  EA+  L K            I+  S+   Y  S + +            +R LA + 
Sbjct: 167 ITQEAIPLLPK---------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQV 217
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A+  IRVN +APGPI     ++     +   +     P+ + G+  ++A   +YL S  
Sbjct: 218 -AEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE 276
Query: 249 GKYVNGTTLIVDGGLWL 265
             YV      V GG  L
Sbjct: 277 SSYVTAEVHGVCGGEHL 293

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 106/259 (40%), Gaps = 25/259 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G  A +TG GSGIG EI   F   GA + ++ R    LD A   L +    A     D
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA--AVAARIVAD 66
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V     A     +  E    + ILVN+A    L  A +     +R VM ++  G F    
Sbjct: 67  VT-DAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFW--- 122
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATL--------HYTASWYQIHXXXXXXXXXXITRN 183
            A +   +            + ++S T+         Y AS   +H          +TR 
Sbjct: 123 -ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQ---------LTRA 172
Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           LA EW A   +RVN +APG +     +      E+     D  P+ + GE  +IA AAL+
Sbjct: 173 LAAEW-AGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALF 231
Query: 244 LTSDTGKYVNGTTLIVDGG 262
           L S    YV G  L VDGG
Sbjct: 232 LASPAASYVTGAILAVDGG 250

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 29/269 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GKV L+TG G  IG   + +  + G ++A++   ++ L+ A +++R  G++A  +  D
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA--GNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           V  +E     V+S    FGK+D L N A   G F    +D   + F  V+ I+  G F +
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF-APVQDYPSDDFARVLTINVTGAFHV 123
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
                  LK             I+N ++                      +T   AL+  
Sbjct: 124 -------LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDL- 175
Query: 190 ADYDIRVNGIAPGPIGDTPGMN----------------KLAPDEINSKARDYMPLYKLGE 233
           A Y+IRVN I+PG +G  PG                     P  +  +    +P+ + G+
Sbjct: 176 APYNIRVNAISPGYMG--PGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGD 233
Query: 234 KWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             +I     +L  D   ++ G  L + GG
Sbjct: 234 INEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM----GRRKQVLDAAVSALRSLGIKAVG 67
           L GK A +TGG  GIG  I+ +    GA+VA+       R Q   A VS +   G +AV 
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQ---AVVSEIEQAGGRAVA 85
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              D R  E  ++ +  T E  G LDILVN+A        E+ +   F  V  ++    F
Sbjct: 86  IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPF 145
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHX-XXXXXXXXXITRNLAL 186
                A ++L              I+ I + L     W  I            +T+ LA 
Sbjct: 146 VAIRSASRHLGD---------GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLAR 196
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           + G    I VN + PG   DT   N    D   ++ R+ +     GE  DIA    +L  
Sbjct: 197 DLG-PRGITVNIVHPGST-DTD-XNPADGDHAEAQ-RERIATGSYGEPQDIAGLVAWLAG 252
Query: 247 DTGKYVNGTTLIVDGG 262
             GK+V G +L +DGG
Sbjct: 253 PQGKFVTGASLTIDGG 268

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 115/253 (45%), Gaps = 11/253 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KVAL+T    GIG  I+ +  + GA V +  R+++ +D  V+ L+  G+   G    
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71
Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V + E  +++V       G +DILV NAA   F  +  D +   +  ++ ++   T  M 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
              +  ++K            +L +S+   Y                  +T+NLA+E  A
Sbjct: 132 KAVVPEMEK-------RGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVEL-A 183
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSK-ARDYMPLYKLGEKWDIAMAALYLTSDTG 249
             +IRVN +APG I  T     L  D+   +  ++ + + +LG   D A    +L S+  
Sbjct: 184 PRNIRVNCLAPGLI-KTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDA 242
Query: 250 KYVNGTTLIVDGG 262
            Y+ G T++V GG
Sbjct: 243 SYITGETVVVGGG 255

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 14/219 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIK 64
           L G    ITG   GIG  I+ +  K GA++ I  +  Q        +  A   + ++G K
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102
Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           A+    DVR ++     VE   + FG +DILVN A+   L +  D        +M++++ 
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
           GT+      + YLKK            ILNIS  L+    W++ H              L
Sbjct: 163 GTYLASKACIPYLKK-------SKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 215
Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR 223
            +      +I VN + P     T  M+ L    I S+ R
Sbjct: 216 GMAEEFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCR 254

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 41/284 (14%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------------LDAAVSALR 59
           ++GKVA ITG   G G   +    + GA +  +   KQ+            L   V  + 
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI-LVNAAAGNFLVSAEDLSPNGFRTV 118
           +LG + +  + DVR  +  +  V+      G+LDI L NAA  +       + P  +R +
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145
Query: 119 MDIDSVGTFTMCHEALKYL---KKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXX 175
           +D++  G +     A+ ++   K+            +       +Y AS + +H      
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHG----- 200
Query: 176 XXXXITRNLALEWGADYDIRVNGIAPGPIG-----DTPGMNKLAPDEINSKARDY----- 225
               + R +ALE G   +IRVN + P  +      + P      PD  N    D+     
Sbjct: 201 ----LMRTMALELGP-RNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR 255
Query: 226 ----MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
               +P+  + E  DI+ A L+L SD  +Y+ G +L VDGG  L
Sbjct: 256 QMHVLPIPYV-EPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 31/262 (11%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KV ++TG   GIG  I+ +F   G+         +V+D ++        K    E D
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGS---------KVIDLSIHDPGEA--KYDHIECD 61
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  K  ++  F+ +G + +LVN A        E +S   +R ++D++  G +    
Sbjct: 62  VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 121
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
            A+ Y+ +            I+NIS+      +               +T+++AL++   
Sbjct: 122 FAIPYMIRSRDPS-------IVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL 174
Query: 192 YDIRVNGIAPGPIGDTPGMNKLA-------PDEINSKARDY---MPLYKLGEKWDIAMAA 241
             +R N + P  I DTP + K A       P  I  K  ++    P+ ++G+  ++A A 
Sbjct: 175 --LRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAV 231
Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L S    ++ GT L VDGGL
Sbjct: 232 AFLASREASFITGTCLYVDGGL 253

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 21/258 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           L+GKVAL+TG   GIG  I+    + GA V  +G      ++   A+   LG    G   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV--IGTATS--ESGAQAISDYLGDNGKGMAL 65
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           +V   E  + V+++  + FG +DILVN AA    N L+    +    +  +M+ +    F
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMR---MKEEEWSDIMETNLTSIF 122
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+ + K            I+N+ + +    +  Q +           T+++A E
Sbjct: 123 RLSKAVLRGMMKKRQGR-------IINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 175
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   + VN +APG I     M K   DE  +     +P  +LG+  +IA A  +L S 
Sbjct: 176 V-ASRGVTVNTVAPGFI--ETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASP 232
Query: 248 TGKYVNGTTLIVDGGLWL 265
              Y+ G TL V+GG+++
Sbjct: 233 EAAYITGETLHVNGGMYM 250

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 2   SLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL 61
           S+  PF    L G+ A++TG GSGIG  I+  + + GA V   GR   V + A   +   
Sbjct: 22  SMTGPFS---LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVA-DEIADG 77
Query: 62  GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI 121
           G  A     D+   E A  V E       ++D+LVN A       AE++S   +R V+ +
Sbjct: 78  GGSAEAVVADLADLEGAANVAEE-LAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTV 136
Query: 122 D---------SVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXX 172
           +         S GT  + H + +                I+ I++ L +           
Sbjct: 137 NLDAAWVLSRSFGTAMLAHGSGR----------------IVTIASMLSFQGGRNVAAYAA 180
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG 232
                  +TR LA EW A   + VN +APG +         A DE  ++    +P  +  
Sbjct: 181 SKHAVVGLTRALASEW-AGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWA 239
Query: 233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS 266
              D+   A++L SD   YV+G  L VDGG WL+
Sbjct: 240 TPEDMVGPAVFLASDAASYVHGQVLAVDGG-WLA 272

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 21/264 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           + GKVA+ITG  SGIG  I+  F K GA + ++ R+   L  A  +L+   G++ +    
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   E    VVES    FG  DILVN A      +  + +   ++   ++       + 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWEL-------LV 117
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A++  +             I++ ++       WY+             ++ LA E   
Sbjct: 118 MAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPD-----------EINSKARDYMPLYKLGEKWDIAM 239
           D +IRVN I PG I  TP   K A +            + S A ++ P+ +     ++A 
Sbjct: 178 D-NIRVNCINPGLI-LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELAN 235
Query: 240 AALYLTSDTGKYVNGTTLIVDGGL 263
             ++L S+   Y  G+   VDGG+
Sbjct: 236 FFVFLCSERATYSVGSAYFVDGGM 259

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 27/259 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEG 70
           L GK +LITG  SGIG  I+    K G+ V I G  ++ L +  +AL+ +  I+      
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVC---- 67
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           ++  +E    ++  T      LDILV  A       A  +    F  V+DI+    F + 
Sbjct: 68  NLANKEECSNLISKT----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILN 123
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
            EA+K + +            I+NIS+ +    +  Q +          +T++L+ E  A
Sbjct: 124 REAIKKMIQ-------KRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEV-A 175
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY----MPLYKLGEKWDIAMAALYLTS 246
              I VN +APG I           D++N K R+     +PL   G   D+A A  +L S
Sbjct: 176 TRGITVNAVAPGFIKSD------MTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLAS 229
Query: 247 DTGKYVNGTTLIVDGGLWL 265
           +   Y+ G TL V+GG+ +
Sbjct: 230 NNASYITGQTLHVNGGMLM 248

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVA++TGG SGIG  +     ++GA V  +   ++  D  VS           F+ DV  
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS-DVNVSD---------HFKIDVTN 64
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNG-FRTVMDIDSVGTFTMCHEA 133
           +E  K+ VE T + +G++DILVN  AG    S   L+P   +R ++D++  G++ M    
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVN-NAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYT 123
Query: 134 LKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYD 193
           +  +              I+NI++   Y A+               +TR++A+++     
Sbjct: 124 IPVM-------LAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP--K 174
Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEI----NSKARDY------MPLYKLGEKWDIAMAALY 243
           IR N + PG I  TP + K A  E+    N+  R         P+ ++G   ++A    +
Sbjct: 175 IRCNAVCPGTIM-TPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAF 233
Query: 244 LTSDTGKYVNGTTLIVDGGLWLSRPRHLPK 273
           L SD   ++ G  L VDGGL    P   P 
Sbjct: 234 LASDRSSFITGACLTVDGGLLSKLPISTPN 263

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 21/258 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           L+GKVAL+TG   GIG  I+    + GA V  +G      ++   A+   LG    G   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV--IGTATS--ESGAQAISDYLGDNGKGMAL 65
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           +V   E  + V+++  + FG +DILVN A     N L+    +    +  +M+ +    F
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMR---MKEEEWSDIMETNLTSIF 122
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+ + K            I+N+ + +    +  Q +           T+++A E
Sbjct: 123 RLSKAVLRGMMKKRQGR-------IINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 175
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   + VN +APG I     M K   DE  +     +P  +LG+  +IA A  +L S 
Sbjct: 176 V-ASRGVTVNTVAPGAI--ETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASP 232
Query: 248 TGKYVNGTTLIVDGGLWL 265
              Y+ G TL V+GG+++
Sbjct: 233 EAAYITGETLHVNGGMYM 250

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 21/264 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           + GKVA+ITG  SGIG  I+  F K GA + ++ R+   L  A  +L+   G++ +    
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   E    VVES    FG  DILVN A      +  + +   ++   ++  +      
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMA----- 119
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A++  +             I++ ++       WY+             ++ LA E   
Sbjct: 120 --AVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPD-----------EINSKARDYMPLYKLGEKWDIAM 239
           D +IRVN I PG I  TP   K A +            + S A ++ P+ +     ++A 
Sbjct: 178 D-NIRVNCINPGLI-LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELAN 235
Query: 240 AALYLTSDTGKYVNGTTLIVDGGL 263
             ++L S+   Y  G+   VDGG+
Sbjct: 236 FFVFLCSERATYSVGSAYFVDGGM 259

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G++AL+TGG  GIG  I+    + GA V I  R  +      + L + G        D
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPAD 85
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +  +  A+++ ++  E   +LDILVN A  ++  + E    +G+  VM ++    F+   
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQ 145
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXX-XXXXXXXITRNLALEWGA 190
           + L  L++            ++NI +    +A   Q +           ++R LA E   
Sbjct: 146 QLLPLLRR---SASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD--YMPLYKLGEKWDIAMAALYLTSDT 248
           ++ I VN IAPG       M +   ++  +   D   +P+ + G   ++A  A+ L    
Sbjct: 203 EH-INVNVIAPGRFPSR--MTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTA 259
Query: 249 GKYVNGTTLIVDGGLWL 265
           G Y+ G  + +DGG  L
Sbjct: 260 GAYMTGNVIPIDGGFHL 276

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 19/257 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVA +TG   GIG+ ++  + + GA VAI        + A    ++ G+ +  ++ +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRT---VMDIDSVGTFT 128
           +   +  ++ +    + FG +D+ V A AG       ++  + + +   ++ +D  G + 
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFV-ANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150
Query: 129 MCHEALKYLKKX---XXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
             H   K  KK               I+NI           Q            + ++LA
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQ--------LQAPYNTAKAACTHLAKSLA 202
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
           +EW      RVN I+PG I DT  +   A  ++ +K     PL + G   ++    LYL 
Sbjct: 203 IEWAPF--ARVNTISPGYI-DT-DITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLA 258
Query: 246 SDTGKYVNGTTLIVDGG 262
           S+   +  G+ +++DGG
Sbjct: 259 SNASTFTTGSDVVIDGG 275

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 23/270 (8%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRS-LGIKAVGF 68
           +LKGK A++TG  SGIG  ++T+  K GA V I G  + + ++   S L S  G+KA   
Sbjct: 1   MLKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYL 60
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+   +  +  +    E  G LDILVN A        E+   + +  ++ ++    F 
Sbjct: 61  NADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFH 120
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
               AL  ++K            I+NI++     AS  +            +T+  ALE 
Sbjct: 121 GTAAALPIMQK-------QGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALE- 172
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPD-------EINSKARDYM----PLYKLGEKWDI 237
            A   I  N I PG +  TP + K           +I + AR+ +    P  +      +
Sbjct: 173 NAGKGITCNAICPGWV-RTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQL 231
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
             AA++L+S     + GTTL +DGG W +R
Sbjct: 232 GGAAVFLSSAAADQMTGTTLSLDGG-WTAR 260

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 120/267 (44%), Gaps = 34/267 (12%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L GK  +ITGG  G+G E + Q    GA V +      VLD   +A  R LG  A     
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVL----ADVLDEEGAATARELGDAARYQHL 58
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           DV  +E  ++VV    E FG +D LVN A    G FL   E  S   FR V++I+  G F
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVF 115
Query: 128 TMCHEALKYLKKXX--XXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
                 +  +K               ++ ++ T  Y AS + +           +++  A
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRG---------LSKLAA 166
Query: 186 LEWGADYDIRVNGIAPG----PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           +E G D  IRVN + PG    P+    G+ +   +  N+      P+ ++GE  +IA A 
Sbjct: 167 VELGTDR-IRVNSVHPGMTYTPMTAETGIRQGEGNYPNT------PMGRVGEPGEIAGAV 219
Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRP 268
           + L SDT  YV G  L VDGG W + P
Sbjct: 220 VKLLSDTSSYVTGAELAVDGG-WTTGP 245

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K  LITG   GIG      F K GA +      +  L  A  A     + A     D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVXD 57
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA---GNF--LVSAEDLSPNGFRTVMDIDSVGT 126
           V      ++       H G+LD +V+ A     NF      ED     +  V+ ++  G+
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLED-----WELVLRVNLTGS 112
Query: 127 FTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLAL 186
           F +   A +  ++             + ++A+  Y  +  Q +          +TR LAL
Sbjct: 113 FLVAKAASEAXREKNPGS--------IVLTASRVYLGNLGQANYAASXAGVVGLTRTLAL 164
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E G  + IRVN +APG I +T    K+ P+++  KA    PL + G+  ++A AAL+L S
Sbjct: 165 ELG-RWGIRVNTLAPGFI-ETRXTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLS 221
Query: 247 DTGKYVNGTTLIVDGG 262
           D   ++ G  L VDGG
Sbjct: 222 DESSFITGQVLFVDGG 237

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 21/258 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           L+GKVAL+TG   GIG  I+    + GA V  +G      ++   A+   LG    G   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV--IGTATS--ESGAQAISDYLGDNGKGMAL 65
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           +V   E  + V+++  + FG +DILVN A     N L+    +    +  +M+ +    F
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMR---MKEEEWSDIMETNLTSIF 122
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+ + K            I+N+ + +    +  Q +           T+++A E
Sbjct: 123 RLSKAVLRGMMKKRQGR-------IINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMARE 175
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   + VN +APG I     M K   DE  +     +P  +LG+  +IA A  +L S 
Sbjct: 176 V-ASRGVTVNTVAPGFI--ETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASP 232
Query: 248 TGKYVNGTTLIVDGGLWL 265
              Y+ G TL V+GG+++
Sbjct: 233 EAAYITGETLHVNGGMYM 250

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 21/258 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           L+GKVAL+TG   GIG  I+    + GA V  +G      ++   A+   LG    G   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV--IGTATS--ESGAQAISDYLGDNGKGMAL 65
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           +V   E  + V+++  + FG +DILVN A     N L+    +    +  +M+ +    F
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMR---MKEEEWSDIMETNLTSIF 122
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+ + K            I+N+ + +    +  Q +           T+++A E
Sbjct: 123 RLSKAVLRGMMKKRQGR-------IINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 175
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   + VN +APG I     M K   DE  +     +P  +LG+  +IA A  +L S 
Sbjct: 176 V-ASRGVTVNTVAPGFI--ETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASP 232
Query: 248 TGKYVNGTTLIVDGGLWL 265
              Y+ G TL V+GG+++
Sbjct: 233 EAAYITGETLHVNGGMYM 250

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 115/270 (42%), Gaps = 23/270 (8%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAVGF 68
           +LKGKVA++TG  SGIG  I+T     GA + +   G   ++           G+K +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+ + E  + +V++     G++DILVN A        ED     +  ++ ++    F 
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
               AL ++KK            I+NI++     AS  +             T+  ALE 
Sbjct: 121 GTAAALPHMKK-------QGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKL--APDEIN-----SKARDYM----PLYKLGEKWDI 237
            A   I  N I PG +  TP + K   A  E N     + AR+ +    P  +      +
Sbjct: 174 -AGQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
              A++L SD    + GTT+ VDGG W +R
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGG-WTAR 260

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 21/258 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           L+GKVAL+TG   GIG  I+    + GA V  +G      ++   A+   LG    G   
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKV--IGTATS--ESGAQAISDYLGDNGKGMAL 65
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           +V   E  + V+++  + FG +DILVN A     N L+    +    +  +M+ +    F
Sbjct: 66  NVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMR---MKEEEWSDIMETNLTSIF 122
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+ + K            I+N+ + +    +  Q +           T+++A E
Sbjct: 123 RLSKAVLRGMMKKRQGR-------IINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMARE 175
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   + VN +APG I     M K   DE  +     +P  +LG+  +IA A  +L S 
Sbjct: 176 V-ASRGVTVNTVAPGFI--ETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASP 232
Query: 248 TGKYVNGTTLIVDGGLWL 265
              Y+ G TL V+GG+++
Sbjct: 233 EAAYITGETLHVNGGMYM 250

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 113/266 (42%), Gaps = 20/266 (7%)
Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +++PF    L+G+ AL+TG  +G+G  I+      GA V    RR    D  +  +   G
Sbjct: 1   MKNPFS---LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG 55
Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
             A     D      AK     +F   G  DILVN A       + + S   +  VMD++
Sbjct: 56  GNASALLIDFADPLAAK----DSFTDAG-FDILVNNAGIIRRADSVEFSELDWDEVMDVN 110
Query: 123 SVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITR 182
               F       K L              ++NI++ L +                  +T+
Sbjct: 111 LKALFFTTQAFAKEL------LAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTK 164
Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYMPLYKLGEKWDIAMAA 241
            LA EW A   I VN IAPG I +T     L  D   +KA  + +P  + G   DIA AA
Sbjct: 165 LLANEWAAK-GINVNAIAPGYI-ETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAA 222
Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSR 267
           ++L+S    YV+G  L VDGG WL+R
Sbjct: 223 VFLSSAAADYVHGAILNVDGG-WLAR 247

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 13/261 (4%)
Query: 4   ESPFKAD---ILKGKVALITGG-GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR 59
           E+P + D   +LKGKV L+T   G+GIG   + +    GA V I    ++ L      L 
Sbjct: 9   EAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA 68
Query: 60  SLGIKAV-GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
            LG+  V     DV   E    ++  T E  G+LD+LVN A         D++   +  V
Sbjct: 69  DLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRV 128
Query: 119 MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXX 178
           +++           AL+Y +             I+N ++ L + A   Q H         
Sbjct: 129 LNVTLTSVMRATRAALRYFR------GVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVM 182
Query: 179 XITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
            +TR  A+E   ++ +R+N ++P  I     + K +  E+  +        +  E W++A
Sbjct: 183 ALTRCSAIE-AVEFGVRINAVSP-SIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVA 240
Query: 239 MAALYLTSDTGKYVNGTTLIV 259
               +L SD   Y+ G  + V
Sbjct: 241 ATIAFLASDYSSYMTGEVVSV 261

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 10/256 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK AL+TG   G+GF  +      GA V +   R  +L  +V  L   G  A G   D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 72  VRRQEHAKKVVESTFEHFG-KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V   E A +   S  +  G  +DIL+N A   +     +L    ++ V+D +    F + 
Sbjct: 67  VT-DELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVS 125
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A K +              I+NI +     A                +T ++A EW A
Sbjct: 126 RSAAKRM------IARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEW-A 178
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            ++I+ N I PG I        +   + +S  +   P  + G   ++   A++L+S    
Sbjct: 179 QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASD 238
Query: 251 YVNGTTLIVDGGLWLS 266
           Y+NG  + VDGG WL+
Sbjct: 239 YINGQIIYVDGG-WLA 253

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 108/252 (42%), Gaps = 18/252 (7%)
Query: 17  ALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG-DVRR 74
           ALITG   GIG  I+ +  + G ++AI  G+ ++  +      R  G   V   G ++  
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
            E A  +V    E  G LD LVN A       LV  +D     +  V++ +    F    
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKD---EDWEAVLEANLSAVFRTTR 120
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
           EA+K + K            I+NI++ +    +  Q +           TR +A E+ A 
Sbjct: 121 EAVKLMMK-------ARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEY-AQ 172
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             I VN +APG I     M +  P E+       +P  + G   ++A A  +L S+   Y
Sbjct: 173 RGITVNAVAPGFIETE--MTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGY 230
Query: 252 VNGTTLIVDGGL 263
           + G TL VDGGL
Sbjct: 231 ITGQTLCVDGGL 242

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 15/254 (5%)
Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           + K AL+TG   G+G   + +  ++G ++ I   R K+        +  LG+K +  + +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +    K++ +   E FG+LD+ VN AA   L    +L    +   M+I++        
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQ 122
Query: 132 EALKYLKKXXXXXXXXXXXXILNISA--TLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
           EA K ++K            I++IS+  ++ Y  ++  +           +TR LA+E  
Sbjct: 123 EAAKLMEK-------NGGGHIVSISSLGSIRYLENYTTV--GVSKAALEALTRYLAVEL- 172
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           +   I VN ++ G I DT  +      E +   AR   P  ++ E  D+     +L S  
Sbjct: 173 SPKQIIVNAVSGGAI-DTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSK 231
Query: 249 GKYVNGTTLIVDGG 262
              + G T+IVDGG
Sbjct: 232 ADMIRGQTIIVDGG 245

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 12/254 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ AL+TG   G+G  ++      GA + I G     +   V   R++G  A     D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +    +      E    +DILVN A   F     +L    ++ V+D +    F +  
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGR 143
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
           EA K +              I+NI +     A                +TR +A EW A 
Sbjct: 144 EAAKRM-------IPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEW-AQ 195
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPD--EINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           Y I+ N I PG +     MN+   D  E ++  +   P  + G+  ++   A++L++   
Sbjct: 196 YGIQANAIGPGYM--LTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASAS 253
Query: 250 KYVNGTTLIVDGGL 263
            YVNG  + VDGG+
Sbjct: 254 DYVNGQIIYVDGGM 267

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 23/270 (8%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAVGF 68
           +LKGKVA++TG  SGIG  I+T     GA + +   G   ++           G+K +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+ + E  + +V++     G++DILVN A        ED     +  ++ ++    F 
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
               AL ++KK            I+NI++     AS  +             T+  ALE 
Sbjct: 121 GTAAALPHMKK-------QGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKL--APDEIN-----SKARDYM----PLYKLGEKWDI 237
            A   I  N I PG +  +P + K   A  E N     + AR+ +    P  +      +
Sbjct: 174 -AGQGITANAICPGWV-RSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
              A++L SD    + GTT+ VDGG W +R
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGG-WTAR 260

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 147 K-----AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 200
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 201 TVNAVCPGFV-ETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 147 K-----AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 200
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 201 TVNAVCPGWV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 147 K-----AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 200
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 201 TVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 23/270 (8%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAVGF 68
           +LKGKVA++TG  SGIG  I+T     GA + +   G   ++           G+K +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+ + E  + +V++     G++DILVN A        ED     +  ++ ++    F 
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
               AL ++KK            I+NI++     AS  +             T+  ALE 
Sbjct: 121 GTAAALPHMKK-------QGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173
Query: 189 GADYDIRVNGIAPG----PIGDTPGMNKLAPD---EINSKARDYM----PLYKLGEKWDI 237
            A   I  N I PG    P+ +   ++ LA     +  + AR+ +    P  +      +
Sbjct: 174 -AGQGITANAICPGWVRAPLVEKQ-ISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
              A++L SD    + GTT+ VDGG W +R
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGG-WTAR 260

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 142
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 143 K-----AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 196
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 197 TVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 255
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 256 IGPGAAAVTAQALNVCGGL 274

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 126
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 127 K-----AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 180
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 181 TVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 239
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 240 IGPGAAAVTAQALNVCGGL 258

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 25/264 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ A++TGG  GIG  I+    K GA+VAI         A V+ L + G      E D
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF---AVEVD 66
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V ++      ++   +  G  D+L   A  + +  A D++   +    D+++ G F    
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126
Query: 132 EALK-YLKKXXXXXXXXXXXXILNISATL--HYTASWYQIHXXXXXXXXXXITRNLALEW 188
            A + +L                 + A L  HY+AS + +            T+ LA E 
Sbjct: 127 IACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGW---------TQALAREM 177
Query: 189 GADYDIRVNGIAPGPIGDT---------PGMNKLAPDEINSKARDYMPLYKLGEKWDIAM 239
            A  +IRVN + PG +              +  + P+ + ++     PL ++ E  D+A 
Sbjct: 178 -APKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVAD 236
Query: 240 AALYLTSDTGKYVNGTTLIVDGGL 263
             ++L SD  +++ G  + V GG+
Sbjct: 237 VVVFLASDAARFMTGQGINVTGGV 260

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 147 K-----AGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLEL-ARTGI 200
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 201 TVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVL 142
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 143 K-----AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 196
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 197 TVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 255
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 256 IGPGAAAVTAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 17/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR 
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
               + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + L
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K                I+NI++T       +              T+ L LE  A   I
Sbjct: 147 K-----AGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGI 200
Query: 195 RVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VN + PG + +TP           + +++ +E   +    +P+ +  +  ++A    YL
Sbjct: 201 TVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 259
Query: 245 TSDTGKYVNGTTLIVDGGL 263
                  V    L V GGL
Sbjct: 260 IGPGAAAVTAQALNVCGGL 278

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 30/268 (11%)
Query: 5   SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK 64
           S FK   L G+ AL+TG   GIG  I+  F   GA V + G R+  L    +    LG  
Sbjct: 21  SMFK---LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA---DLGKD 74
Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDI 121
              F  ++  ++  K++ E        +DILVN A        V  +D     +  V+ +
Sbjct: 75  VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD---QDWDDVLAV 131
Query: 122 DSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXIT 181
           +     T+  E +  + +            I+NI++ +    +  Q +           +
Sbjct: 132 NLTAASTLTRELIHSMMRRRYGR-------IINITSIVGVVGNPGQTNYCAAKAGLIGFS 184
Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD----YMPLYKLGEKWDI 237
           + LA E  A  +I VN IAPG I           D++N K ++     +P+ ++G   +I
Sbjct: 185 KALAQEI-ASRNITVNCIAPGFI------KSAMTDKLNEKQKEAIMAMIPMKRMGIGEEI 237
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWL 265
           A A +YL SD   Y+ G TL ++GG+ +
Sbjct: 238 AFATVYLASDEAAYLTGQTLHINGGMAM 265

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  KVAL+TG   GIGFE++      GA+V      +   +   ++ +  G KA G   +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL----SPNGFRTVMDIDSVGTF 127
           +   E  +            +DILVN A     ++ ++L    S + +++V++ +    F
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAG----ITRDNLXXRXSEDEWQSVINTNLSSIF 118
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
               E ++   K            I++I + +    +  Q +           +++LA E
Sbjct: 119 RXSKECVRGXXKKRWGR-------IISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYE 171
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A  +I VN +APG I  T   +KL  DE  S     +P  ++GE  DIA A  +L S+
Sbjct: 172 V-ASRNITVNVVAPGFIA-TDXTDKL-TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASE 228
Query: 248 TGKYVNGTTLIVDGGLW 264
             KY+ G TL V+GG +
Sbjct: 229 EAKYITGQTLHVNGGXY 245

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 110/262 (41%), Gaps = 16/262 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK+A++TG  SGIG   +  F + GA V +  R    L      +   G +A    GD
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V  +   + +VE     FG LD    NA A   +     LS  G+R  +D +     T  
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTN----LTSA 121
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIH-XXXXXXXXXXITRNLALEWG 189
             A KY               +   S+ + +TA +  +            + + LA+E G
Sbjct: 122 FLAAKY---QVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELG 178
Query: 190 ADYDIRVNGIAPGPIGDTPG----MNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
           A   IRVN + PG   DTP     +   AP E          L ++    +IA AALYL 
Sbjct: 179 AR-GIRVNALLPGGT-DTPANFANLPGAAP-ETRGFVEGLHALKRIARPEEIAEAALYLA 235
Query: 246 SDTGKYVNGTTLIVDGGLWLSR 267
           SD   +V G  L+ DGG  +++
Sbjct: 236 SDGASFVTGAALLADGGASVTK 257

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR--------RKQVLDAAVSALRSLGI 63
             GK  +ITG  +GIG   +  F K GA V I GR        ++Q+L A V A +   I
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEK---I 80
Query: 64  KAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDS 123
            AV    DV        ++ +T   FGK+DILVN A  N      D + N  + V     
Sbjct: 81  NAV--VADVTEASGQDDIINTTLAKFGKIDILVNNAGANL----ADGTANTDQPVELYQK 134
Query: 124 VGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATL-----HYTASWYQIHXXXXXXXXX 178
             TF +  +A+  + +            I+N+S+ +     H    +Y            
Sbjct: 135 --TFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYY----ACAKAALD 188
Query: 179 XITRNLALEWGADYDIRVNGIAPGPIGD----TPGMNKLAPDEINS---KARDYMPLYKL 231
             TR  A++    + +RVN ++PG +        G+ + A D++ S     ++ +P+   
Sbjct: 189 QYTRCTAIDL-IQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC 247
Query: 232 GEKWDIAMAALYLTS-DTGKYVNGTTLIVDGGLWL 265
           G+  +IA   ++L   +   Y+ G +++ DGG  L
Sbjct: 248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL 282

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 23/264 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL TG G GIG  I+ + G+ GASV +  G   +  +  V+ L+ LG + V  + 
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+ +      + +    HFG LD +++ +         +++   F  V ++++ G F + 
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 138
Query: 131 HEALKYLKKXXXXXXXXXXXXILN-ISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
            + LK+ ++            ++  I     Y  S   +             R  A++ G
Sbjct: 139 QQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVE---------GFCRAFAVDCG 189
Query: 190 ADYDIRVNGIAPGPIGD----------TPGMNKLAPDE-INSKARDYMPLYKLGEKWDIA 238
           A   + VN IAPG +             PG  K  P E I+    +  PL ++G   DI 
Sbjct: 190 AK-GVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG 248
Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
            A   L  +  +++NG  + + GG
Sbjct: 249 RAVSALCQEESEWINGQVIKLTGG 272

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 32/276 (11%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGAS-VAI-MGRRKQVLDAA----------VSALR 59
           L+GKVA ITG   G G   + +  + GA  VAI + R++  LD A          V  + 
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
             G + +  + DVR     + VV+     FG +DILV+    +       L+   +  ++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163
Query: 120 DIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXX 179
             + +G +  C   L  + +            ++ +S+T+    +  Q H          
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQGGS------VIFVSSTVGLRGAPGQSHYAASKHGVQG 217
Query: 180 ITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-----LAPDEINSKARDYMPLYK---- 230
           +  +LA E G  ++IRVN + PG +     +N+       P   N    D   L+     
Sbjct: 218 LMLSLANEVG-RHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTL 276
Query: 231 LGEKW----DIAMAALYLTSDTGKYVNGTTLIVDGG 262
           L   W    D++ A  +L SD  +Y++G  + VDGG
Sbjct: 277 LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGF 68
              K  +ITG  +GIG   +  F + GA+V I GR  + L+     +   G+   +    
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV-----MDIDS 123
             DV  ++   +++ ST + FGK+D+LVN A            P+ F T      +DI  
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAI--------PDAFGTTGTDQGIDIYH 115
Query: 124 VGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQ-IHXXXXXXXXXXITR 182
             T  +  +A+  + K            I+N+S+ +    +    ++           TR
Sbjct: 116 -KTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR 174
Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYM-------PLYKLGEK 234
           + A++  A + IRVN ++PG + +T   N +  PD+ + K  ++M       P+   G+ 
Sbjct: 175 STAIDL-AKFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP 232
Query: 235 WDIAMAALYLTS-DTGKYVNGTTLIVDGGLWL 265
             IA   L+L   +   Y+ G +++ DGG  L
Sbjct: 233 EHIANIILFLADRNLSFYILGQSIVADGGTSL 264

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 120/268 (44%), Gaps = 35/268 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L GK  +ITGG  G+G E + Q    GA V +      VLD   +A  R LG  A     
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVL----ADVLDEEGAATARELGDAARYQHL 58
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           DV  +E  ++VV    E FG +D LVN A    G FL   E  S   FR V++I+  G F
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVF 115
Query: 128 TMCHEALKYLKKX--XXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
                 +  +K               ++ ++ T  Y AS + +           +++  A
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVR---------GLSKLAA 166
Query: 186 LEWGADYDIRVNGIAPG----PIGDTPGMNKLAPDEINSKARDYMPLYKLG-EKWDIAMA 240
           +E G D  IRVN + PG    P+    G+ +   +  N+      P+ ++G E  +IA A
Sbjct: 167 VELGTDR-IRVNSVHPGMTYTPMTAETGIRQGEGNYPNT------PMGRVGNEPGEIAGA 219
Query: 241 ALYLTSDTGKYVNGTTLIVDGGLWLSRP 268
            + L SDT  YV G  L VDGG W + P
Sbjct: 220 VVKLLSDTSSYVTGAELAVDGG-WTTGP 246

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQV----------LDAAVSAL 58
           L+G+VA ITG   G G   + +    GA   +V I G+              L   V  +
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 59  RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
            +   + V    D R  +  +KVV+      G+LDI+V  A      + +D++P  FR V
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128
Query: 119 MDIDSVGTF-TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXX 177
           MDI+  GT+ T+   A + ++             I+ IS+        + IH        
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEG-------GRGGSIILISSAAGMKMQPFMIHYTASKHAV 181
Query: 178 XXITRNLALEWGADYDIRVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMP 227
             + R  A E G  + IRVN + PGP+ +TP          G       +++     ++P
Sbjct: 182 TGLARAFAAELG-KHSIRVNSVHPGPV-NTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP 239
Query: 228 LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            + + E  DIA    +L SD  + V    + VD G
Sbjct: 240 DW-VAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           V ++TG   GIG  I+   GK G  V +   R  +  +     + + G +A+ F GDV +
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           +   + ++++  + +G +D++VN A          +  + +  V+D++  G F     A 
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           K + K            I+NI++ +    +  Q +           ++  A E GA  +I
Sbjct: 123 KIMMK-------KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE-GASRNI 174
Query: 195 RVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT-SDTGKYVN 253
            VN + PG I     M     +++  K    +PL + G+  ++A    +L  S    Y+ 
Sbjct: 175 NVNVVCPGFIASD--MTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYIT 232
Query: 254 GTTLIVDGGLWL 265
           G    +DGG+ +
Sbjct: 233 GQAFTIDGGIAI 244

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 9/250 (3%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           V L+TGG  GIG  +     + G  V +     ++  DA V+A+   G +AV   GDV  
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 75  QEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
                    +    FG+LD LV NA   ++    ++ S       + ++  G+     EA
Sbjct: 88  AADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEA 147
Query: 134 LKYLKKXXXXXXXXXXXXILNISATLHYTASWYQ-IHXXXXXXXXXXITRNLALEWGADY 192
           ++   +            I+N+S+      S  Q +            T  LA E  A+ 
Sbjct: 148 VRRXSR----LYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE- 202
Query: 193 DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV 252
            IRVN + PG I      +   PD     A   +P  + G   ++A A LYL S +  YV
Sbjct: 203 GIRVNAVRPGIIETDLHASGGLPDRAREXAPS-VPXQRAGXPEEVADAILYLLSPSASYV 261
Query: 253 NGTTLIVDGG 262
            G+ L V GG
Sbjct: 262 TGSILNVSGG 271

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQVL-------DAAVSA--LR 59
           + GKVA I+G   G G   + +  + GA   ++ I G  + +        D A +A  ++
Sbjct: 13  VAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVK 72
Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTV 118
            L  + V  + DVR  E  K  V+S  E  G+LDI+V NA  G        +  N ++ +
Sbjct: 73  DLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDM 132
Query: 119 MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISA---TLHYTASWYQIHXXXXXX 175
           +DI+  G +      + ++              +    A   T HY A+ + +       
Sbjct: 133 IDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGV------- 185
Query: 176 XXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-----LAPDEINSKARDYMP--- 227
               + R  A+E G  + IRVN + P  +  T  MN        PD  N    D+ P   
Sbjct: 186 --IGLMRAFAVELGP-HMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQ 242
Query: 228 -LYKLGEKW----DIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
            ++ L   W    DI+ A L+L SD  +YV G +L VD G  L
Sbjct: 243 MMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAGSLL 285

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 11/252 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK AL+TG   GIG  I+ +    GA+V +     +    A +A  S+G KA     D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAE---GAKAAAASIGKKARAIAAD 60
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      K +        G +DILVN A+    V+ +D+  + +R ++D++  GTF +  
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
                ++             +++I++   +  +                TR LA E G  
Sbjct: 121 AGTDQMR------AAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG-K 173
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           Y+I  N + PG I ++ G+     +E          +   G+   IA    +L SD  ++
Sbjct: 174 YNITANAVTPGLI-ESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARW 232
Query: 252 VNGTTLIVDGGL 263
           + G TL VD G+
Sbjct: 233 ITGQTLNVDAGM 244

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 15/257 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L  ++AL+TG   GIG  I+ +    GA VA+         D  V+A+ + G +A   + 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV ++   + +  +  E +G+LD+LVN A          +  + +++V+D++  G F   
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCS 145
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A K + K            I+NI++ +    +  Q +          +T+ +A E  A
Sbjct: 146 RAAAKIMLK-------QRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKEL-A 197
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD-TG 249
              I VN +APG I  T   ++LA +    K  + +PL + GE  ++A    +L +D   
Sbjct: 198 SRGITVNAVAPGFIA-TDMTSELAAE----KLLEVIPLGRYGEAAEVAGVVRFLAADPAA 252
Query: 250 KYVNGTTLIVDGGLWLS 266
            Y+ G  + +DGGL ++
Sbjct: 253 AYITGQVINIDGGLVMA 269

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 21/265 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK ALITG   GIG   +  + + GA+VAI       ++ A  A   +G  A   + D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEIGPAAYAVQXD 62
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGT-FTMC 130
           V RQ+     + +T EH G LDILVN AA   L    +++   +  +  I+  GT FT+ 
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             A + + +            I+N ++                      +T++  L+   
Sbjct: 123 AAARQXIAQ-------GRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDL-I 174
Query: 191 DYDIRVNGIAPGPIGDT--PGMNKLAPDEIN----SKAR---DYMPLYKLGEKWDIAMAA 241
            + I VN IAPG +      G++ L     N     K R   + +P  + G   D+   A
Sbjct: 175 KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXA 234
Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLS 266
           ++L S    Y+   T  VDGG W S
Sbjct: 235 IFLASAESDYIVSQTYNVDGGNWXS 259

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 10/253 (3%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           +VA +TGG  G+G  IS +    G +VA+    R   +   +   R  G     +  DV 
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             E  ++  E     FGK+D+L+N A      +   ++   +  VM  D    F +    
Sbjct: 86  DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVT--- 142
Query: 134 LKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYD 193
               K+            I+NI +      ++ Q +           T+ LALE  A   
Sbjct: 143 ----KQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALET-AKRG 197
Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN 253
           I VN ++PG +  T  +  +  D + +K    +P+ +LG   ++A    +L SD   +V 
Sbjct: 198 ITVNTVSPGYLA-TAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVT 256
Query: 254 GTTLIVDGGLWLS 266
           G  L ++GG+ +S
Sbjct: 257 GADLAINGGMHMS 269

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 24/255 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK  L+TG  SGIG      F + GAS+  + R +++L  AV+AL +  I  V    D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV---AD 60
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  + V     E FG+L  + + A       + +L    +  V+ ++  G+F +  
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 120
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
           +A + L++             L ++ ++    ++   H          + R LALE  A 
Sbjct: 121 KAGEVLEEGGS----------LVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALEL-AR 169
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             +RVN + PG I  TP    L P     E+ +      PL + G   ++A AAL+L S+
Sbjct: 170 KGVRVNVLLPGLI-QTPMTAGLPPWAWEQEVGAS-----PLGRAGRPEEVAQAALFLLSE 223
Query: 248 TGKYVNGTTLIVDGG 262
              Y+ G  L VDGG
Sbjct: 224 ESAYITGQALYVDGG 238

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 118/287 (41%), Gaps = 43/287 (14%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR----RKQVLDAAVSA---------- 57
           ++GKVA +TG   G G   + +  + GA +  +      R  V+D A+ A          
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 58  --LRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNG 114
             ++    + V  E DVR  +  K  V+S  E  G+LDI+V NA  GN   + +  S   
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128
Query: 115 FRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISA---TLHYTASWYQIHXX 171
           +  ++DI+  G +      + ++              +  + A   T HY A+ + +   
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV--- 185
Query: 172 XXXXXXXXITRNLALEWGADYDIRVNGIAPG----PIGDTPGMNKL-APDEINSKARDYM 226
                   + R   +E G  + IRVN + P     P+    G  K+  PD  N    D  
Sbjct: 186 ------VGLMRAFGVELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMA 238
Query: 227 PLYKLG--------EKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
           P+ ++         E  DI+ A L+  SD  +Y+ G TL +D G  L
Sbjct: 239 PICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 111/265 (41%), Gaps = 25/265 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           LKGKVAL+TG   GIG  I+ +    GA VAI  G RK+  +  V  ++S G  A     
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 71  DVRRQEHAKKVVESTFEH-------FGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMD 120
           ++    H  + + S+ ++         K DIL+N A    G F+   E+ +   F   + 
Sbjct: 65  NLESL-HGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI---EETTEQFFDRXVS 120
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXI 180
           +++   F +  +AL  L+             I+NIS+     +    I            
Sbjct: 121 VNAKAPFFIIQQALSRLRD---------NSRIINISSAATRISLPDFIAYSXTKGAINTX 171
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
           T  LA + GA   I VN I PG +        L+       A       +LGE  DIA  
Sbjct: 172 TFTLAKQLGA-RGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADT 230
Query: 241 ALYLTSDTGKYVNGTTLIVDGGLWL 265
           A +L S   ++V G  + V GG  L
Sbjct: 231 AAFLASPDSRWVTGQLIDVSGGSCL 255

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 104/248 (41%), Gaps = 21/248 (8%)
Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           L+TGG  GIG  I+  F   G  VAI  R  +  +         G  AV  + D+   E 
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------GFLAV--KCDITDTEQ 73
Query: 78  AKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYL 137
            ++  +   E  G +++L+  A          +S   F +V++ +  GTF       + +
Sbjct: 74  VEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTF-------RVV 126
Query: 138 KKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVN 197
           K+            ++ IS+ +    S  Q +            R+LA E G+  +I  N
Sbjct: 127 KRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGS-RNITFN 185
Query: 198 GIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTL 257
            +APG + DT  M K+  DE  +     +PL +     +IA    +L SD   Y+ G  +
Sbjct: 186 VVAPGFV-DTD-MTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVI 243
Query: 258 IVDGGLWL 265
            VDGGL +
Sbjct: 244 PVDGGLGM 251

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 105/268 (39%), Gaps = 17/268 (6%)
Query: 6   PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA 65
           P  + + + + A +TG  SGIG  ++      G +V    R  + + AAV  LR+ G   
Sbjct: 16  PRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDV 75
Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            G   DV   +     V +  E FG + ILVN+A  N      DL    +  V+D +  G
Sbjct: 76  DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTG 135
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
            F +  E L+                I+NI++T       Y              T+++ 
Sbjct: 136 VFRVTREVLR-----AGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVG 190
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNK----------LAPDEINSKARDYMPLYKLGEKW 235
            E  A   I VN + PG + +TP   +          +   E++ +    +PL +     
Sbjct: 191 FEL-AKTGITVNAVCPGYV-ETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE 248
Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           ++A    YL +D    +    L V GGL
Sbjct: 249 EVAGLVGYLVTDAAASITAQALNVCGGL 276

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 103/249 (41%), Gaps = 19/249 (7%)
Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
           AL+TGG  GIG  I+      G  VAI  R  +       A +SLG  AV    D+ + +
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPE------EAAQSLG--AVPLPTDLEKDD 56
Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             K +V+   E  G L +LV+AAA N    A +LS   +R V+ +     F +   A  +
Sbjct: 57  -PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPH 115
Query: 137 LKKXXXXXXXXXXXXILNISATLHYTASWYQ--IHXXXXXXXXXXITRNLALEWGADYDI 194
           + +            +L I +   +TA                  +TR LA EW A   I
Sbjct: 116 MAE-------AGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEW-ARLGI 167
Query: 195 RVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNG 254
           RVN + PG +     +      E+       +P+ +     +IA  A  L  D  +Y+ G
Sbjct: 168 RVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTG 227
Query: 255 TTLIVDGGL 263
             + VDGG 
Sbjct: 228 QAVAVDGGF 236

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 103/259 (39%), Gaps = 18/259 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVAL+TG G GIG  I+ +  K G +VAI         A  S +   G  AV  + DV  
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           ++     VE   +  G  D++VN A        E ++P     V +I+  G       A+
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDI 194
           +  KK            I+N  +   +  +               +T+  A +  A   I
Sbjct: 123 EAFKK------EGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDL-APLGI 175
Query: 195 RVNGIAPGPIGDTPGMNKL--APDEINSKARDY--------MPLYKLGEKWDIAMAALYL 244
            VNG  PG I  TP   ++     E   K   Y        + L +L E  D+A    YL
Sbjct: 176 TVNGYCPG-IVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234
Query: 245 TSDTGKYVNGTTLIVDGGL 263
            S    Y+ G +L++DGG+
Sbjct: 235 ASPDSDYMTGQSLLIDGGM 253

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 19/257 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +GK+AL+TG   GIG  I+      GA V      +   + A +    LG    G   +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE---NGAQAISDYLGANGKGLMLN 59
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           V      + V+E     FG++DILVN A     N L+  +D   N    +++ +    F 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFR 116
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
           +    ++ + K            I+ I + +    +  Q +           +++LA E 
Sbjct: 117 LSKAVMRAMMKKRHGR-------IITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREV 169
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A   I VN +APG I     M +   D+  +     +P  +LG   +IA A  +L SD 
Sbjct: 170 -ASRGITVNVVAPGFI--ETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDE 226
Query: 249 GKYVNGTTLIVDGGLWL 265
             Y+ G TL V+GG+++
Sbjct: 227 AAYITGETLHVNGGMYM 243

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 19/257 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +GK+AL+TG   GIG  I+      GA V      +   + A +    LG    G   +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE---NGAQAISDYLGANGKGLMLN 59
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           V      + V+E     FG++DILVN A     N L+  +D   N    +++ +    F 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFR 116
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
           +    ++ + K            I+ I + +    +  Q +           +++LA E 
Sbjct: 117 LSKAVMRAMMKKRHGR-------IITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREV 169
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A   I VN +APG I     M +   D+  +     +P  +LG   +IA A  +L SD 
Sbjct: 170 -ASRGITVNVVAPGFI--ETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDE 226
Query: 249 GKYVNGTTLIVDGGLWL 265
             Y+ G TL V+GG+++
Sbjct: 227 AAYITGETLHVNGGMYM 243

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 15/258 (5%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVR 73
           K  ++TGG  GIG   +      GA+VA++ R     ++      +  G+K   ++ DV 
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS 74
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             +   K ++      G +  L+  A  + +  A +L+   F  V D++  G F  C   
Sbjct: 75  NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 134
Query: 134 LK-YLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADY 192
            K +L+K               I        S  Q+           + + LA EW A  
Sbjct: 135 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW-ASA 193
Query: 193 DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY----MPLYKLGEKWDIAMAALYLTSDT 248
            IRVN ++PG +      N      ++ K RD+    +PL +  +  ++   A+ L SD 
Sbjct: 194 GIRVNALSPGYV------NTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH 247
Query: 249 GKYVNGTTLIVDGG--LW 264
             Y+ G    +DGG  +W
Sbjct: 248 ATYMTGGEYFIDGGQLIW 265

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 109/266 (40%), Gaps = 41/266 (15%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           L+GKVAL+TGG SG+G E+       GA VA       + +AA   L + LG +++    
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAF----SDINEAAGQQLAAELGERSMFVRH 59
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     V+ +     G L++LVN A        E      F  ++ I++   F  C
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHX----XXXXXXXXXITRNLAL 186
            + +  +K+            I+N+++     +SW  I               +TR  AL
Sbjct: 120 QQGIAAMKE--------TGGSIINMAS----VSSWLPIEQYAGYSASKAAVSALTRAAAL 167
Query: 187 EWGAD-YDIRVNGIAPGPIGDTPGMNKLAPD-----------EINSKARDYMPLYKLGEK 234
                 Y IRVN I P  I  TP M    P            ++N   R YMP     E+
Sbjct: 168 SCRKQGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMP-----ER 221
Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVD 260
             IA   L+L SD    ++G+ L  D
Sbjct: 222 --IAQLVLFLASDESSVMSGSELHAD 245

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK KV LITG G+G+G E +  F K+GA V +   +       V  +++ G +A   + D
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT--KTVDEIKAAGGEAWPDQHD 377
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +   A  ++++  + +G +DILVN A      S   +S   + +V  +  +GTF +  
Sbjct: 378 VAKDSEA--IIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSR 435
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
            A  Y  +            I+NI++T     ++ Q +          +++ +A+E GA 
Sbjct: 436 LAWPYFVE-------KQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIE-GAK 487
Query: 192 YDIRVNGIAP 201
            +I+VN +AP
Sbjct: 488 NNIKVNIVAP 497

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 112/261 (42%), Gaps = 38/261 (14%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-EG 70
           L GKVAL++GG  G+G          GA V        +LD    A+ +    A  +   
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVF----GDILDEEGKAMAAELADAARYVHL 60
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV +    K  V++    FG L +LVN A    + + ED +   ++ ++D++  G F   
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 131 HEALKYLKKXXXXXXXXXXXXILNIS---------ATLHYTASWYQIHXXXXXXXXXXIT 181
              +K +K+            I+NIS         A   YTA+ + +           +T
Sbjct: 121 RAVVKPMKE-------AGRGSIINISSIEGLAGTVACHGYTATKFAVR---------GLT 164
Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           ++ ALE G    IRVN I PG +  TP M    P++I   A     L +  E  +++   
Sbjct: 165 KSTALELGPS-GIRVNSIHPGLV-KTP-MTDWVPEDIFQTA-----LGRAAEPVEVSNLV 216
Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
           +YL SD   Y  G   +VDGG
Sbjct: 217 VYLASDESSYSTGAEFVVDGG 237

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 11/251 (4%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK AL+TG   GIG  I+ +    GA+V +     +    A +A  S+G KA     D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAE---GAKAAAASIGKKARAIAAD 60
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      K +        G +DILVN A+    V+ +D+  + +R ++D++  GTF +  
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
                 +             +++I++   +  +                TR LA E G  
Sbjct: 121 AGTDQXR------AAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELG-K 173
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           Y+I  N + PG I ++ G+     +E              G+   IA    +L SD  ++
Sbjct: 174 YNITANAVTPGLI-ESDGVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASDDARW 232
Query: 252 VNGTTLIVDGG 262
           + G TL VD G
Sbjct: 233 ITGQTLNVDAG 243

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 107/272 (39%), Gaps = 35/272 (12%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE----- 69
           K A+ITG  SGIG  I+    K GA++ + G        A   +R++  +  G       
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGF------GAPDEIRTVTDEVAGLSSGTVL 79
Query: 70  ---GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGT 126
               D  +            + FG  DILVN A   F+   ED     +  ++ ++   +
Sbjct: 80  HHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSS 139
Query: 127 FTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLAL 186
           F     A+   KK            I+NI++     AS ++            +T+ +AL
Sbjct: 140 FHTIRGAIPPXKK-------KGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVAL 192
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDE-----------INSKARDYMPLYKLGEKW 235
           E  A+  + VN I PG +  TP + K  PD+           IN       P  K     
Sbjct: 193 EV-AESGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVE 250
Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
            +A  ALYL  D    + GT +  DGG W ++
Sbjct: 251 QVASLALYLAGDDAAQITGTHVSXDGG-WTAQ 281

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 31/270 (11%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK ALITG   GIG   +  + + GA VAI       L+AA +    +G  A     D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADIN---LEAARATAAEIGPAACAIALD 59
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  Q    + V    + +G +DILVN AA   L    +++   +  +  I+  GT  M  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
              + +              I+N+++                      +T++  L     
Sbjct: 120 AVARAM------IAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL-IR 172
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY---------------MPLYKLGEKWD 236
           + I VN IAPG +      +    D +++K  DY               +P  ++G   D
Sbjct: 173 HGINVNAIAPGVV------DGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAED 226
Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGLWLS 266
           +   A++L +    Y+   T  VDGG W+S
Sbjct: 227 LTGMAIFLATPEADYIVAQTYNVDGGNWMS 256

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-------KQVLDAAVSALRSLGIK 64
           L GK   ITG   GIG  I+ +  + GA+VAI  +           + +A +A+ + G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
            +  + D+R ++  +  V +T + FG +DILVN A+  +L    D     F     +++ 
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNAR 123
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHX--XXXXXXXXXITR 182
           G+F      L +L +            IL ++       +W+  H            +T 
Sbjct: 124 GSFVCAQACLPHLLQ-------APNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTL 176
Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKL 213
            LA E+G    + +N + P  +  T  +N L
Sbjct: 177 GLAAEFGPQ-GVAINALWPRTVIATDAINXL 206

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 19/256 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TG   GIG  I+    + GA V I     +    A+S    LG    G   +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKV-IGTATSESGAQAISDY--LGDNGKGXALN 63
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           V   E  + V+++  + FG +DILVN A     N L   ++     +  + + +    F 
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEE---WSDIXETNLTSIFR 120
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
           +    L+   K            I+N+ + +    +  Q +           T++ A E 
Sbjct: 121 LSKAVLRGXXKKRQGR-------IINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREV 173
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A   + VN +APG I       K   DE  +     +P  +LG+  +IA A  +L S  
Sbjct: 174 -ASRGVTVNTVAPGFI--ETDXTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPE 230
Query: 249 GKYVNGTTLIVDGGLW 264
             Y+ G TL V+GG +
Sbjct: 231 AAYITGETLHVNGGXY 246

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 84/206 (40%), Gaps = 26/206 (12%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL----GIKAVG 67
           L G+VALITGG SG+G  +  +F   GA VA       VLD +   LR L    G  AVG
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVA-------VLDKSAERLRELEVAHGGNAVG 55
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVM-DIDSVG 125
             GDVR  +  K+  E     FGK+D L+ NA   ++  +  DL  +       DI  V 
Sbjct: 56  VVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVN 115
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
                H     +K             +  IS    Y      ++          + R +A
Sbjct: 116 VKGYIHA----VKACLPALVSSRGSVVFTISNAGFYPNGGGPLY-TATKHAVVGLVRQMA 170
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMN 211
            E      +RVNG+APG      GMN
Sbjct: 171 FELAP--HVRVNGVAPG------GMN 188

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           K+A++TG GSG+G  ++      G  VA+ GRR   LDA       +G  A+    DV  
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDVTD 85
Query: 75  QEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
            +  + +  +T E FG++D+L  NA  G   +  EDL+   ++ V+D +  G F    EA
Sbjct: 86  PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEA 145
Query: 134 LKYLK 138
            +  K
Sbjct: 146 FRVXK 150

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALRSLGIKAVGFEGDV 72
           A+ITGG   IG  I+ +  + G  V +  R      Q L A ++A R+    AV  +GD+
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA--GSAVLCKGDL 71
Query: 73  RRQ----EHAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTVMDIDSVG 125
                  +  + +++ +F  FG+ D+LVN A+  +   L+  +D   NG      ID+  
Sbjct: 72  SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDT--NGAADAKPIDAQV 129
Query: 126 TFTMCHEALKYL--------KKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXXXXXX 176
                  A+  L        ++            ++N+  A        + ++       
Sbjct: 130 AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHAL 189
Query: 177 XXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKW 235
              +TR  ALE  A   IRVN +APG     P M    P E   + R  +PL        
Sbjct: 190 GG-LTRAAALEL-APRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAA 243
Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
            IA A  +L S    Y+ GTTL VDGGL L+R
Sbjct: 244 QIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 45/281 (16%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------------LDAAVSALR 59
           L GKVA ITG   G G   + +    GA +  +    Q+            L A V  + 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
            +G + V  + DVR +E     +++  +  G+LDI+V A AG   +SA D   +G+  V+
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVV-ANAGIAPMSAGD---DGWHDVI 126
Query: 120 DIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-------ATLHYTASWYQIHXXX 172
           D++  G +     A+  L K               ++        ++ Y A+ + +    
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGV---- 182
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----------LAPDEINSKA 222
                  +  NL     A   IRVN I P  + +TP +N            A  +     
Sbjct: 183 --VGLMRVYANLL----AGQMIRVNSIHPSGV-ETPMINNEFTREWLAKMAAATDTPGAM 235
Query: 223 RDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            + MP+  L  + D+A A  +L SD  +Y+ G TL VD G 
Sbjct: 236 GNAMPVEVLAPE-DVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIK 64
           L+GK   I+GG  GIG  I+ +    GA+VA++ +  +        +  A   +   G +
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           A+   GD+R  +     V  T E FG +DI VN A+   L S E++    F  +  I   
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126
Query: 125 GTFTMCHEALKYLK 138
           GT+ +    + ++K
Sbjct: 127 GTYAVSQSCIPHMK 140

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 102/254 (40%), Gaps = 15/254 (5%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           KV LITGG  GIG   +    + G +VA+         D  V  +R  G +A+  + DV 
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVA 85
Query: 74  RQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
           ++       E+     G+L  LV NA   +     + ++    +   +I+  G+F    E
Sbjct: 86  KEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCARE 145
Query: 133 ALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQ-IHXXXXXXXXXXITRNLALEWGAD 191
           A+K                I+N+S+      S  Q +            T  LA E  A 
Sbjct: 146 AVKRXST----RYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEV-AT 200
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY---MPLYKLGEKWDIAMAALYLTSDT 248
             IRVN + PG I      +  A   + ++ARD    +P  + G   ++A A ++L  D 
Sbjct: 201 EGIRVNAVRPGII----ETDIHASGGLPNRARDVAPQVPXQRAGTAREVAEAIVWLLGDQ 256
Query: 249 GKYVNGTTLIVDGG 262
             Y  G  L V GG
Sbjct: 257 ASYTTGALLDVTGG 270

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 31/253 (12%)
Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           L+TGG  GIG  I+ +    G  VA+  R          A + L     G E DV   + 
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAVTHR-------GSGAPKGL----FGVEVDVTDSDA 87
Query: 78  AKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
             +   +  EH G +++LV+ A   A  FL+    ++   F  V++ +  G F +   A 
Sbjct: 88  VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMR---MTEEKFEKVINANLTGAFRVAQRAS 144
Query: 135 KYLK--KXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADY 192
           + ++  K            +  I    +Y AS   +           + R++A E  +  
Sbjct: 145 RSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGV---------IGMARSIAREL-SKA 194
Query: 193 DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV 252
           ++  N +APG I DT  M +   + I   A  ++P  ++G   ++A    +L S+   Y+
Sbjct: 195 NVTANVVAPGYI-DTD-MTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYI 252
Query: 253 NGTTLIVDGGLWL 265
           +G  + VDGG+ +
Sbjct: 253 SGAVIPVDGGMGM 265

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 98/254 (38%), Gaps = 17/254 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE-G 70
           L G+  L+TG G GIG          GA V  + R +  LD+ V      GI+ V  + G
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR--ECPGIEPVCVDLG 62
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D    E A           G +D+LVN AA   L    +++   F    +++      + 
Sbjct: 63  DWEATERA-------LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
               + L              I+N+S+     A                +T+ +ALE G 
Sbjct: 116 QIVARGL------IARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            + IRVN + P  +  + G    +         + +PL K  E   +  A L+L SD   
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG 228
Query: 251 YVNGTTLIVDGGLW 264
              G+TL V+GG W
Sbjct: 229 MTTGSTLPVEGGFW 242

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 33/254 (12%)
Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           L+TGG  GIG  I+ +    G  VA+  R          A + L     G E DV   + 
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHR-------GSGAPKGL----FGVECDVTDSDA 67
Query: 78  AKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
             +   +  EH G +++LV+ A   A  FL+    ++   F  V++ +  G F +   A 
Sbjct: 68  VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMR---MTEEKFEKVINANLTGAFRVAQRAS 124
Query: 135 KYLKKXXXXXXXXXXXXILNISATLHYTASW---YQIHXXXXXXXXXXITRNLALEWGAD 191
           + +++            ++ I +    + SW    Q +          + R++A E  + 
Sbjct: 125 RSMQRNKFGR-------MIFIGSV---SGSWGIGNQANYAASKAGVIGMARSIAREL-SK 173
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
            ++  N +APG I DT  M +   + I   A  ++P  ++G   ++A    +L S+   Y
Sbjct: 174 ANVTANVVAPGYI-DTD-MTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASY 231
Query: 252 VNGTTLIVDGGLWL 265
           ++G  + VDGG+ +
Sbjct: 232 ISGAVIPVDGGMGM 245

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 31/253 (12%)
Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH 77
           L+TGG  GIG  I+ +    G  VA+  R          A + L     G E DV   + 
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHR-------GSGAPKGL----FGVEVDVTDSDA 67
Query: 78  AKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
             +   +  EH G +++LV+ A   A  FL+    ++   F  V++ +  G F +   A 
Sbjct: 68  VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMR---MTEEKFEKVINANLTGAFRVAQRAS 124
Query: 135 KYLK--KXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADY 192
           + ++  K            +  I    +Y AS   +           + R++A E  +  
Sbjct: 125 RSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGV---------IGMARSIAREL-SKA 174
Query: 193 DIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYV 252
           ++  N +APG I DT  M +   + I   A  ++P  ++G   ++A    +L S+   Y+
Sbjct: 175 NVTANVVAPGYI-DTD-MTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYI 232
Query: 253 NGTTLIVDGGLWL 265
           +G  + VDGG+ +
Sbjct: 233 SGAVIPVDGGMGM 245

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 98/254 (38%), Gaps = 17/254 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE-G 70
           L G+  L+TG G GIG          GA V  + R +  LD+ V      GI+ V  + G
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR--ECPGIEPVCVDLG 62
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D    E A           G +D+LVN AA   L    +++   F    +++      + 
Sbjct: 63  DWEATERA-------LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
               + L              I+N+S+     A                +T+ +ALE G 
Sbjct: 116 QIVARGL------IARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            + IRVN + P  +  + G    +         + +PL K  E   +  A L+L SD   
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG 228
Query: 251 YVNGTTLIVDGGLW 264
              G+TL V+GG W
Sbjct: 229 MTTGSTLPVEGGFW 242

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             G+ A++TGG SGIG   +T+F + GA + +    +  L+ AV+ LR  G  A G   D
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR  +   ++ +  F   G +D++ + A          ++ + +R V+DID  G+     
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE 148
Query: 132 EALKYL 137
             L  L
Sbjct: 149 AFLPRL 154

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 38/261 (14%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-EG 70
           L GKVAL++GG  G G          GA V        +LD    A  +    A  +   
Sbjct: 5   LTGKVALVSGGARGXGASHVRAXVAEGAKVVF----GDILDEEGKAXAAELADAARYVHL 60
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV +    K  V++    FG L +LVN A    + + ED +   ++ ++D++  G F   
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 131 HEALKYLKKXXXXXXXXXXXXILNIS---------ATLHYTASWYQIHXXXXXXXXXXIT 181
              +K  K+            I+NIS         A   YTA+ + +           +T
Sbjct: 121 RAVVKPXKE-------AGRGSIINISSIEGLAGTVACHGYTATKFAVR---------GLT 164
Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           ++ ALE G    IRVN I PG +  TP  + + P++I   A     L +  E  +++   
Sbjct: 165 KSTALELGPS-GIRVNSIHPGLV-KTPXTDWV-PEDIFQTA-----LGRAAEPVEVSNLV 216
Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
           +YL SD   Y  G   +VDGG
Sbjct: 217 VYLASDESSYSTGAEFVVDGG 237

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 30/212 (14%)
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV------SAEDLSPNGFRTVMDIDSV 124
           DV + E  + +V++T    GKLDI+     GN  V      S  +     F+ VMDI+  
Sbjct: 72  DVTKDEDVRNLVDTTIAKHGKLDIMF----GNVGVLSTTPYSILEAGNEDFKRVMDINVY 127
Query: 125 GTFTMCHEALKYL---KKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXIT 181
           G F +   A + +   KK                  +  YTA+ + +           +T
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV---------LGLT 178
Query: 182 RNLALEWGADYDIRVNGIAPGPIG-----DTPGMNKLAPDEINSKARDYMPLYKLGEKWD 236
            +L  E G +Y IRVN ++P  +      D  G++    +E+  +A +        E  D
Sbjct: 179 TSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE--D 235
Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGLWLSRP 268
           +A A  YL  D  KYV+G  L++DGG   + P
Sbjct: 236 VADAVAYLAGDESKYVSGLNLVIDGGYTRTNP 267

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALRSLGIKAVGFEGDV 72
           A+ITGG   IG  I+ +  + G  V +  R      Q L A ++A R+    AV  +GD+
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAG--SAVLCKGDL 71
Query: 73  RRQ----EHAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTVMDIDSVG 125
                  +  + +++ +F  FG+ D+LVN A+  +   L+  +D   NG      ID+  
Sbjct: 72  SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDT--NGAADAKPIDAQV 129
Query: 126 TFTMCHEALKYL--------KKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXXXXXX 176
                  A+  L        ++            ++N+  A        + ++       
Sbjct: 130 AELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHAL 189
Query: 177 XXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKW 235
              +TR  ALE  A   IRVN +APG     P      P E   + R  +PL        
Sbjct: 190 GG-LTRAAALEL-APRHIRVNAVAPGLSLLPPAX----PQETQEEYRRKVPLGQSEASAA 243
Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
            IA A  +L S    Y+ GTTL VDGGL L+R
Sbjct: 244 QIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 20/197 (10%)
Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIM---------GRRKQVLDAAVSALRSLGIK 64
           G+VA++TG G+G+G E +  F + GA V +          G  ++  D  V  +R  G +
Sbjct: 19  GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE 78
Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           AV    D        KV+E+  + FG++DILVN A      S    S   +  V D+   
Sbjct: 79  AV---ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLK 135
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNL 184
           G+F     A  Y+KK            I+  S+      ++ Q++          +   +
Sbjct: 136 GSFKCTQAAFPYMKK-------QNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTV 188
Query: 185 ALEWGADYDIRVNGIAP 201
           A+E GA  ++  N I P
Sbjct: 189 AIE-GARNNVLCNVIVP 204

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 27/270 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV--GFE 69
           LKGK AL+TG  +GIG  I+T     GA+V I GRR++ ++  +  +R+    A+     
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            D+  ++  + V+    E + K+DIL+N       V   D+    +  + +++      +
Sbjct: 68  ADLGTEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRL 123
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
                 YLKK            ++ I++      S    H          ++R+LA E  
Sbjct: 124 TR---SYLKK----XIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLA-ELT 175
Query: 190 ADYDIRVNGIAPGPI---GDTPGMNKLAPDE----------INSKARDYMPLYKLGEKWD 236
              ++ VN I PG     G    +N L P+E             + R    + +L    +
Sbjct: 176 TGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEE 235
Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGLWLS 266
           IA    +L+S     +NG+ L +DGGL  S
Sbjct: 236 IAHLVTFLSSPLSSAINGSALRIDGGLVRS 265

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 34/255 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +GK+AL+TG   GIG  I+      GA V      +   + A +    LG    G   +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE---NGAQAISDYLGANGKGLMLN 59
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           V      + V+E     FG++DILVN A     N L+  +D   N    +++ +    F 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFR 116
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
           +    ++ + K            I+ I    +Y A+   +            +++LA E 
Sbjct: 117 LSKAVMRAMMKKRHGR-------IITIGGQANYAAAKAGL---------IGFSKSLAREV 160
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A   I VN +APG I  +        D+  +     +P  +LG   +IA A  +L SD 
Sbjct: 161 -ASRGITVNVVAPGFIETS--------DDQRAGILAQVPAGRLGGAQEIANAVAFLASDE 211
Query: 249 GKYVNGTTLIVDGGL 263
             Y+ G TL V+GG+
Sbjct: 212 AAYITGETLHVNGGM 226

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 98/247 (39%), Gaps = 24/247 (9%)
Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
           ++TGGG GIG +I   F + G  V  +    K+  D A             F GDV    
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFY-----FHGDVADPL 60
Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
             KK VE   E   ++D+LVN A      S   LS   +     I SVG      +A   
Sbjct: 61  TLKKFVEYAMEKLQRIDVLVNNACRG---SKGILSSLLYEEFDYILSVGL-----KAPYE 112
Query: 137 LKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRV 196
           L +            I+NI++T  + +                +T  LA+  G   D+ V
Sbjct: 113 LSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP--DVLV 170
Query: 197 NGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTT 256
           N IAPG I      N     E   +    +P  K+G   DI+   L+L      ++ G T
Sbjct: 171 NCIAPGWI------NVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGET 222
Query: 257 LIVDGGL 263
           +IVDGG+
Sbjct: 223 IIVDGGM 229

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 99/280 (35%), Gaps = 28/280 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------------LDAAVSALR 59
           ++ KV L+TGG  G G   + +  + GA + +      +            L+ A   + 
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
             G KA   E DVR +    + + +    FGKLD++V A AG   + A  L    F    
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVV-ANAGICPLGAH-LPVQAFADAF 125
Query: 120 DIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXX 179
           D+D VG     H AL YL              ++  +                       
Sbjct: 126 DVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLV 185
Query: 180 ITRNLALEWG-ADYDIRVNGIAPGPI-----GDTPGMNKLAPD-EINSKARDYMPLYKLG 232
            +  L L    A   IR N I P  +        P   +  PD E  S+A   +    + 
Sbjct: 186 DSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQ 245
Query: 233 -------EKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
                  E  DI+ A  +L SD  +YV G    VD G  L
Sbjct: 246 AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 24/266 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
           L   VA++TGG SGIG        + GA+VA   R  + L AA SALR    G +     
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV      +   E+     G   ILVN A    + +  + +   +   + +     F++
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLK---FFSV 122
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
            H    +L +            I+ +++ L      + +           + R++A E+ 
Sbjct: 123 IHPVRAFLPQ----LESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEF- 177
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY------------MPLYKLGEKWDI 237
           A   +RVNGI  G +    G  +   +    +  D+            +PL +LG+  + 
Sbjct: 178 APKGVRVNGILIGLV--ESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEA 235
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGL 263
           A A L+L S    Y  G+ + V GGL
Sbjct: 236 ARAILFLASPLSAYTTGSHIDVSGGL 261

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 22/265 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK--AVGFE 69
            + +  L+TGGGSGIG  ++      GASV I+GR    L  AV  L +LG    A+ +E
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68
Query: 70  -GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSP------NGFRTVMDID 122
             D+  ++   + V++     G+L  +V+ A G     +E++ P        +R  +D++
Sbjct: 69  PTDITNEDETARAVDAVTAWHGRLHGVVHCAGG-----SENIGPITQVDSEAWRRTVDLN 123
Query: 123 SVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITR 182
             GT  +    LK+  +            I +I+A+   T  W+  +          + +
Sbjct: 124 VNGTMYV----LKHAAREMVRGGGGSFVGISSIAAS--NTHRWFGAY-GVTKSAVDHLMQ 176
Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
             A E GA + +RVN I PG I            E++S      PL + GE  D+A  A+
Sbjct: 177 LAADELGASW-VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAM 235
Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSR 267
           +L SD   +V G  + VDGG  L R
Sbjct: 236 FLLSDAASFVTGQVINVDGGQMLRR 260

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVG 67
           ++   A++TG    IG  I+ +  + G  V I        +AAVS    L  +    AV 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVV 78
Query: 68  FEGDVRRQE----HAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTV-- 118
            + D+          ++++ S F  FG+ D+LVN A+  +   LV  +    +  +TV  
Sbjct: 79  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138
Query: 119 -----MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXX 172
                +  +++  F +   +    +K            I+N+  A +      + ++   
Sbjct: 139 QVAELIGTNAIAPFLLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 197
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPL 228
                  +T++ ALE  A Y IRVNG+APG          L P    +E   K R  +PL
Sbjct: 198 KHALVG-LTQSAALEL-APYGIRVNGVAPGV--------SLLPVAMGEEEKDKWRRKVPL 247
Query: 229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             +      IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 17/256 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE-G 70
             G  AL+TG G GIG +        GA V  + R     D    A    GI+ V  + G
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS--DLVSLAKECPGIEPVCVDLG 62
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D    E A           G +D+LVN AA   +    +++   F     ++    F + 
Sbjct: 63  DWDATEKA-------LGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVS 115
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
               + +              I+N+S+ + +      I           +T+ +A+E G 
Sbjct: 116 QMVARDM------INRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP 169
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            + IRVN + P  +    G    A  E   K ++  PL K  E  D+  + L+L SD   
Sbjct: 170 -HKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 228
Query: 251 YVNGTTLIVDGGLWLS 266
             +G  ++VD G   S
Sbjct: 229 STSGGGILVDAGYLAS 244

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVG 67
           ++   A++TG    IG  I+ +  + G  V I        +AAVS    L  +    AV 
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVV 58
Query: 68  FEGDVRRQE----HAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTV-- 118
            + D+          ++++ S F  FG+ D+LVN A+  +   LV  +    +  +TV  
Sbjct: 59  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 118
Query: 119 -----MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXX 172
                +  +++  F +   +    +K            I+N+  A +      + ++   
Sbjct: 119 QVAELIGTNAIAPFLLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 177
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPL 228
                  +T++ ALE  A Y IRVNG+APG          L P    +E   K R  +PL
Sbjct: 178 KHALVG-LTQSAALEL-APYGIRVNGVAPGV--------SLLPVAMGEEEKDKWRRKVPL 227
Query: 229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             +      IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVG 67
           ++   A++TG    IG  I+ +  + G  V I        +AAVS    L  +    AV 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVV 78
Query: 68  FEGDVRRQE----HAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTV-- 118
            + D+          ++++ S F  FG+ D+LVN A+  +   LV  +    +  +TV  
Sbjct: 79  XQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138
Query: 119 -----MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXX 172
                +  +++  F +   +    +K            I+N+  A +      + ++   
Sbjct: 139 QVAELIGTNAIAPFLLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 197
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPL 228
                  +T++ ALE  A Y IRVNG+APG          L P    +E   K R  +PL
Sbjct: 198 KHALVG-LTQSAALEL-APYGIRVNGVAPGV--------SLLPVAMGEEEKDKWRRKVPL 247
Query: 229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             +      IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 19/258 (7%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASV-AIMG----RRKQVLDAAVSALRSLGIKA 65
           ++  ++A +TGG  GIG  I  +  K G  V A  G    RR + L+      ++LG   
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQ----KALGFDF 65
Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
              EG+V   +  K+  +      G++D+LVN A     V    ++   ++ V+D +   
Sbjct: 66  YASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTS 125
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
            F +  + +  + +            I+NIS+       + Q +           T +LA
Sbjct: 126 LFNVTKQVIDGMVE-------RGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 178
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E  A   + VN ++PG IG T  +  + PD +  K    +P+ +LG   +I     +L 
Sbjct: 179 QEV-ATKGVTVNTVSPGYIG-TDMVKAIRPDVL-EKIVATIPVRRLGSPDEIGSIVAWLA 235
Query: 246 SDTGKYVNGTTLIVDGGL 263
           S+   +  G    ++GGL
Sbjct: 236 SEESGFSTGADFSLNGGL 253

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 22/266 (8%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGK AL+TG  SGIG  I+    + GA++ + G        A++ +   G+KAV    D
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPAD 59
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      + +       FG +DILVN A    +   E      +  ++ ++    F    
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
            AL  ++             I+NI++      S  +            +T+ + LE  A 
Sbjct: 120 LALPGMRA-------RNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLE-TAT 171
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA----------A 241
            ++  N I PG +  TP + K   D   +        + L  +   ++A           
Sbjct: 172 SNVTCNAICPGWV-LTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230
Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSR 267
           L+L S+ G  V G    VDGG WL++
Sbjct: 231 LFLCSEAGSQVRGAAWNVDGG-WLAQ 255

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVG 67
           ++   A++TG    IG  I+ +  + G  V I        +AAVS    L  +    AV 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVV 78
Query: 68  FEGDVRRQE----HAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTV-- 118
            + D+          ++++ S F  FG+ D+LVN A+  +   LV  +    +  +TV  
Sbjct: 79  CQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138
Query: 119 -----MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXX 172
                +  +++  F +   +    +K            I+N+  A +      + ++   
Sbjct: 139 QVAELIGTNAIAPFLLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMG 197
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPL 228
                  +T++ ALE  A Y IRVNG+APG          L P    +E   K R  +PL
Sbjct: 198 KHALVG-LTQSAALEL-APYGIRVNGVAPGV--------SLLPVAMGEEEKDKWRRKVPL 247
Query: 229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             +      IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVG 67
           ++   A++TG    IG  I+ +  + G  V I        +AAVS    L  +    AV 
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVV 58
Query: 68  FEGDVRRQE----HAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTV-- 118
            + D+          ++++ S F  FG+ D+LVN A+  +   LV  +    +  +TV  
Sbjct: 59  XQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 118
Query: 119 -----MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXX 172
                +  +++  F +   +    +K            I+N+  A +      + ++   
Sbjct: 119 QVAELIGTNAIAPFLLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 177
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPL 228
                  +T++ ALE  A Y IRVNG+APG          L P    +E   K R  +PL
Sbjct: 178 KHALVG-LTQSAALEL-APYGIRVNGVAPGV--------SLLPVAMGEEEKDKWRRKVPL 227
Query: 229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             +      IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 19/262 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEG 70
           LKGK  LITG   GIG   +  F + GA V + GR+    +D  ++++R+ G  A  F  
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE---DLSPNGFRTVMDIDSVGTF 127
           D+   E  +++V+     FG +D+L+N A G  LV  +   ++    +  VMD +     
Sbjct: 65  DLATSEACQQLVDEFVAKFGGIDVLINNAGG--LVGRKPLPEIDDTFYDAVMDANIRSVV 122
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
                AL +L                 + +T                        N+   
Sbjct: 123 MTTKFALPHLAAAAKASGQTSA-----VISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKN 177
Query: 188 WGADYD----IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           W  D+     +R N ++PG +      +K    ++  +  + +P+ + G   ++A A L+
Sbjct: 178 W-VDFHTKDGVRFNIVSPGTVDTAFHADKT--QDVRDRISNGIPMGRFGTAEEMAPAFLF 234
Query: 244 LTSDTGK-YVNGTTLIVDGGLW 264
             S     Y+ G  L ++GG +
Sbjct: 235 FASHLASGYITGQVLDINGGQY 256

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 5   SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAI---------MGRRKQVLDAAV 55
           SP + D   G+V L+TG G+G+G   +  F + GA V +         +G+     D  V
Sbjct: 24  SPLRFD---GRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVV 80
Query: 56  SALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGF 115
             +R  G KAV     V   E  +KVV++  + FG++D++VN A      S   +S   +
Sbjct: 81  EEIRRRGGKAVANYDSV---EEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDW 137
Query: 116 RTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXX 175
             +  +   G+F +   A +++KK            I+  SA+  Y  ++ Q +      
Sbjct: 138 DIIHRVHLRGSFQVTRAAWEHMKK------QKYGRIIMTSSASGIY-GNFGQANYSAAKL 190
Query: 176 XXXXITRNLALEWGADYDIRVNGIAP 201
               +  +LA+E G   +I  N IAP
Sbjct: 191 GLLGLANSLAIE-GRKSNIHCNTIAP 215

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVG 67
           ++   A++TG    IG  I+ +  + G  V I        +AAVS    L  +    AV 
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVV 78
Query: 68  FEGDVRRQE----HAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTV-- 118
            + D+          ++++ S F  FG+ D+LVN A+  +   LV  +    +  +TV  
Sbjct: 79  XQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 138
Query: 119 -----MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXX 172
                +  +++  F +   +    +K            I+N+  A +      + ++   
Sbjct: 139 QVAELIGTNAIAPFLLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMG 197
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPL 228
                  +T++ ALE  A Y IRVNG+APG          L P    +E   K R  +PL
Sbjct: 198 KHALVG-LTQSAALEL-APYGIRVNGVAPGV--------SLLPVAMGEEEKDKWRRKVPL 247
Query: 229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             +      IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 248 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 37/278 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVG 67
           ++   A++TG    IG  I+ +  + G  V I        +AAVS    L  +    AV 
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVV 58
Query: 68  FEGDVRRQE----HAKKVVESTFEHFGKLDILVNAAAGNF---LVSAEDLSPNGFRTV-- 118
            + D+          ++++ S F  FG+ D+LVN A+  +   LV  +    +  +TV  
Sbjct: 59  XQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVET 118
Query: 119 -----MDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNIS-ATLHYTASWYQIHXXX 172
                +  +++  F +   +    +K            I+N+  A +      + ++   
Sbjct: 119 QVAELIGTNAIAPFLLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMG 177
Query: 173 XXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYMPL 228
                  +T++ ALE  A Y IRVNG+APG          L P    +E   K R  +PL
Sbjct: 178 KHALVG-LTQSAALEL-APYGIRVNGVAPGV--------SLLPVAMGEEEKDKWRRKVPL 227
Query: 229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             +      IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 228 GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 265

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 112/279 (40%), Gaps = 35/279 (12%)
Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGA-------------SVAIMGRRKQVLDAA 54
           +A  L+G+VA ITG   G G   + +    GA             SV       + LD  
Sbjct: 9   QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDET 68
Query: 55  VSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNG 114
              +   G KA+    DVR     +++V    E FG+LD++V  A         +L+   
Sbjct: 69  ARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ 128
Query: 115 FRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATL---HYTASWYQIHXX 171
           + TV+ ++  GT+      +  + +               + AT    HY+AS + +   
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGL--- 185
Query: 172 XXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY------ 225
                   +T  LA+E G +Y IRVN I P  + +TP +   A  EI ++   +      
Sbjct: 186 ------TALTNTLAIELG-EYGIRVNSIHPYSV-ETPMIEPEAMMEIFARHPSFVHSFPP 237
Query: 226 MPLYKLG--EKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
           MP+   G     ++A    +L  D    + GT + VD G
Sbjct: 238 MPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           ++  VA++TGG SG+G   + +    GA V ++  R +        +  LG +A     D
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE------DVVADLGDRARFAAAD 60
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA-GNFL-VSAED--LSPNGFRTVMDIDSVGTF 127
           V   E A        E  G L I+VN A  GN + V + D   S   FR ++DI+ VG+F
Sbjct: 61  V-TDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119
Query: 128 TMCHEALKYLKKXX-XXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLAL 186
            +   A + + K             I+N ++   +     Q            +T  +A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP-LYKLGEKWDIAMAALYLT 245
           +  A + IRV  IAPG + DTP +  L P+E  +     +P   +LG   +    A+++ 
Sbjct: 180 DL-ASHRIRVMTIAPG-LFDTPLLASL-PEEARASLGKQVPHPSRLGNPDEYGALAVHII 236
Query: 246 SDTGKYVNGTTLIVDGGLWLSRPR 269
            +    +NG  + +DG + ++ PR
Sbjct: 237 EN--PMLNGEVIRLDGAIRMA-PR 257

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 103/256 (40%), Gaps = 38/256 (14%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KV +ITG   GIG          G   A   R  +V+  + S   S         GD+ +
Sbjct: 29  KVVVITGASQGIGA---------GLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISK 79
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLV------SAEDLSPNGFRTVMDIDSVGTFT 128
            E A ++V    E FG++D LVN  AG FL       + ED   N     + ++  G F 
Sbjct: 80  PETADRIVREGIERFGRIDSLVN-NAGVFLAKPFVEXTQEDYDHN-----LGVNVAGFFH 133
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATL--HYTASWYQIHXXXXXXXXXXITRNLAL 186
           +   A     K            I++I+ +L                      +TR+LA 
Sbjct: 134 ITQRAAAEXLK-------QGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAX 186
Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E+ +   +RVN ++PG I  TP      P E +S      P+ + GE  D+  A LYL  
Sbjct: 187 EF-SRSGVRVNAVSPGVI-KTPXH----PAETHSTLAGLHPVGRXGEIRDVVDAVLYL-- 238
Query: 247 DTGKYVNGTTLIVDGG 262
           +   ++ G  L VDGG
Sbjct: 239 EHAGFITGEILHVDGG 254

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 24/264 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
           ++GK+A++T G SG+GF  + +  ++GA + +  R ++ L+AA S + SL  G +     
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           GD+R      ++ E      G  DILV +  G          P  F  +   D   ++ +
Sbjct: 65  GDIREPGDIDRLFEKA-RDLGGADILVYSTGGP--------RPGRFMELGVEDWDESYRL 115
Query: 130 CHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXX-XXXITRNLALEW 188
              +  ++ +             +    ++     W  +            + R LALE 
Sbjct: 116 LARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAP----------DEINSKARDYMPLYKLGEKWDIA 238
            A + + VN + P  I  T  +  LA           +E        +P+ ++G+  ++A
Sbjct: 176 -APHGVTVNAVLPSLI-LTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELA 233
Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
               +L S+   ++ G  + VDGG
Sbjct: 234 SVVAFLASEKASFITGAVIPVDGG 257

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 26/253 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           ++ K  L+     GIG  ++    + GA V I  R +++L  +       G + V    D
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVV--CD 67
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +R+       ++  FE   ++DILV  A G      ++L+   F+  +D   +    +  
Sbjct: 68  LRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 121
Query: 132 EALKYLK-KXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             L  +K K            +++    L+ + S                 + L+ E  A
Sbjct: 122 NYLPAMKEKGWGRIVAITSFSVISPIENLYTSNS--------ARMALTGFLKTLSFEV-A 172
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            Y I VN +APG   +T  + +L  +E   +    +P+ ++ +  +IA    +L S+   
Sbjct: 173 PYGITVNCVAPG-WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS 231
Query: 251 YVNGTTLIVDGGL 263
           Y+ G T++VDGGL
Sbjct: 232 YLTGQTIVVDGGL 244

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
          + G+V ++TG   GIG  I+ Q  K GA+V I GR    L       +SLG + V    D
Sbjct: 3  MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 72 VRRQEHAKKVVEST-FEHFGKLDILVNAA 99
            ++   + + E    E  G+LD+LVN A
Sbjct: 63 SSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 112/281 (39%), Gaps = 43/281 (15%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------------LDAAVSALR 59
            +GK ALITGG  G+G   +    + GA +AI  R +              L   V+ + 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
             G + +  + DV+ +   +  V    +  G +DI +  A  + +    ++    +  V+
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI 127
Query: 120 DIDSVGTF-TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXX 178
             +  GTF T+   A   +K+            I+ +S+ L ++A++ Q           
Sbjct: 128 GTNLTGTFNTIAAVAPGMIKR--------NYGRIVTVSSMLGHSANFAQASYVSSKWGVI 179
Query: 179 XITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK------LAPDEINSKARD-------- 224
            +T+  A +    Y I VN +APG I +TP  +       + PD      +D        
Sbjct: 180 GLTKCAAHDL-VGYGITVNAVAPGNI-ETPMTHNDFVFGTMRPDLEKPTLKDVESVFASL 237
Query: 225 ---YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
              Y P  K  E   +  A L+L  +   ++ GT L +D G
Sbjct: 238 HLQYAPFLKPEE---VTRAVLFLVDEASSHITGTVLPIDAG 275

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 63/128 (49%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVALITG  SGIG   +      GA+VAI  RR + L A    L + G K    E D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++     V ST E  G LDILVN A    L   ED     +  ++D + +G   M  
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124
Query: 132 EALKYLKK 139
            AL +L +
Sbjct: 125 AALPHLLR 132

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 89/227 (39%), Gaps = 30/227 (13%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL----GIKAVG 67
           LKG+  LITGG SG+G  +  +F   GA VA       VLD +   L  L    G   +G
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVA-------VLDKSAERLAELETDHGDNVLG 55
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPN----GFRTVMDID 122
             GDVR  E  K+        FGK+D L+ NA   ++  +  DL        F  V  I+
Sbjct: 56  IVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHIN 115
Query: 123 SVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITR 182
             G        L  L              I  IS    Y      ++          + R
Sbjct: 116 VKGYIHAVKACLPAL-------VASRGNVIFTISNAGFYPNGGGPLY-TAAKHAIVGLVR 167
Query: 183 NLALEWGADYDIRVNGIAPGPIG-DTPGMNKLAPDEINSKARDYMPL 228
            LA E  A Y +RVNG+  G I  D  G + L    + SKA   +PL
Sbjct: 168 ELAFEL-APY-VRVNGVGSGGINSDLRGPSSLG---MGSKAISTVPL 209

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR- 59
           MSL    K D+L+ ++ L+TG   GIG E +  + ++GA+V ++GR ++ L      +  
Sbjct: 1   MSLHYQPKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIAD 60
Query: 60  SLGIKAVGFEGDV--RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFR 116
              ++   F  D+     E  ++V +    H+ +LD +L NA     +    +  P  ++
Sbjct: 61  EQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQ 120
Query: 117 TVMDIDSVGTFTMCH 131
            VM ++   TF +  
Sbjct: 121 DVMQVNVNATFMLTQ 135

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 18/266 (6%)
Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           M LE+ F    L+G+ AL+TG   GIG  I+      GA V + G +     A    + +
Sbjct: 23  MRLETIFG---LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA 79
Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
            G  A    GD+        ++E   E    +DILV  A+     +   L+PN     + 
Sbjct: 80  SGGTAQELAGDLSEAGAGTDLIERA-EAIAPVDILVINASAQINATLSALTPNDLAFQLA 138
Query: 121 IDSVGTFTMCHEALKYL--KKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXX 178
           ++   T  M   AL  +  +K            +   S    Y A+    H         
Sbjct: 139 VNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQH--------- 189
Query: 179 XITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWD 236
            + ++ A ++  D ++ +N +APG +      ++ A  P+  +   R    + + G   +
Sbjct: 190 NLIQSQARDFAGD-NVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEE 248
Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGG 262
           +  AAL+L S+   ++ G T+ + GG
Sbjct: 249 MVGAALFLASEACSFMTGETIFLTGG 274

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           L   F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG
Sbjct: 4   LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 63
Query: 63  IKAVGF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI 121
             +  +  G +     A++ V    +  G LD+L+     N  ++      +  R  M++
Sbjct: 64  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 123
Query: 122 DSVGTFTMCHEALKYLKK 139
           + +    +   AL  LK+
Sbjct: 124 NFLSYVVLTVAALPMLKQ 141

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           L   F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG
Sbjct: 17  LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 76
Query: 63  IKAVGF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI 121
             +  +  G +     A++ V    +  G LD+L+     N  ++      +  R  M++
Sbjct: 77  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 136
Query: 122 DSVGTFTMCHEALKYLKK 139
           + +    +   AL  LK+
Sbjct: 137 NFLSYVVLTVAALPMLKQ 154

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           L   F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG
Sbjct: 3   LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62
Query: 63  IKAVGF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI 121
             +  +  G +     A++ V    +  G LD+L+     N  ++      +  R  M++
Sbjct: 63  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 122
Query: 122 DSVGTFTMCHEALKYLKK 139
           + +    +   AL  LK+
Sbjct: 123 NFLSYVVLTVAALPMLKQ 140

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG V LITG   GIG   +      G  V +M R ++ L A  + L      A+   GD
Sbjct: 4   MKGAV-LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG----ALPLPGD 58
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR +    + V +  E FG+L  LVN A    +    +L+   +R V+D +  G F    
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118
Query: 132 EALKYLKK 139
            A+  L +
Sbjct: 119 HAVPALLR 126

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 2   SLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL 61
           S    F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    L
Sbjct: 22  SANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 81
Query: 62  GIKAVGF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
           G  +  +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+
Sbjct: 82  GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME 141
Query: 121 IDSVGTFTMCHEALKYLKK 139
           ++ +    +   AL  LK+
Sbjct: 142 VNFLSYVVLTVAALPMLKQ 160

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
Query: 5   SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAI---------MGRRKQVLDAAV 55
           SP + D   G+V L+TG G G+G   +  F + GA V +         +G+     D  V
Sbjct: 3   SPLRFD---GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV 59
Query: 56  SALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGF 115
             +R  G KAV     V   E  +K+V++  + FG++D++VN A      S   +S   +
Sbjct: 60  EEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW 116
Query: 116 RTVMDIDSVGTFTMCHEALKYLKK 139
             +  +   G+F +   A  + KK
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHXKK 140

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 2   SLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL 61
           S    F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    L
Sbjct: 22  SANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 81
Query: 62  GIKAVGF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
           G  +  +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+
Sbjct: 82  GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME 141
Query: 121 IDSVGTFTMCHEALKYLKK 139
           ++ +    +   AL  LK+
Sbjct: 142 VNFLSYVVLTVAALPMLKQ 160

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 48/290 (16%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALRSLGIKAVGFEGD 71
           VAL+TG    +G  I+      G +V +   R       L A ++A R     A+  + D
Sbjct: 9   VALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRP--NSAITVQAD 66
Query: 72  VRRQEHAK-----------------KVVESTFEHFGKLDILVNAAAGNFLV------SAE 108
           +     A                   +V++ + H+G+ D+LVN A+  +        + E
Sbjct: 67  LSNVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLRKDAGE 126
Query: 109 DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXX-------XILNISATLHY 161
             S  G +  +++ +   F     A  +L K                   I+N+   +  
Sbjct: 127 GGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTS 186
Query: 162 TASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK 221
                             +TR+ ALE  A   IRVNG+       +PG++ L  D   S 
Sbjct: 187 QPLLGYTMYTMAKEALEGLTRSAALEL-ASLQIRVNGV-------SPGLSVLPDDMPFSV 238
Query: 222 ARDY---MPLYKLGEKWD-IAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
             DY   +PLY+     + ++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 239 QEDYRRKVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYSLTR 288

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 113/291 (38%), Gaps = 50/291 (17%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALRSLGIKAVGFEGD 71
           VAL+TG    +G  I+      G +V +   R       L A ++A R     A+  + D
Sbjct: 8   VALVTGAAKRLGSGIAEGLHAEGYAVCLHYHRSAAEANTLAATLNARRP--NSAIPVQAD 65
Query: 72  -----------------VRRQEHAKKVVESTFEHFGKLDILVNAAAGNF----LVSAED- 109
                            V   +    +V + + H+G+ D+LVN A+  +    L   ED 
Sbjct: 66  LSNVAKAPAGGADGAAPVTLFKRCADLVAACYTHWGRCDVLVNNASSFYPTPLLRKDEDG 125
Query: 110 -LSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXX-------XILN-ISATLH 160
            +   G R  M+  +   F     A  +L K                   I+N + A   
Sbjct: 126 HVPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTS 185
Query: 161 YTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---PDE 217
                Y I+          +TR+ ALE  A   IRVNG+ PG       ++ LA   P  
Sbjct: 186 QPLLGYTIYTMAKGALEG-LTRSAALEL-APLQIRVNGVGPG-------LSVLADDMPPA 236
Query: 218 INSKARDYMPLYKL-GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
           +    R  +PLY+      +++   ++L S   KYV GT + VDGG  L+R
Sbjct: 237 VREDYRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGYSLTR 287

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-R 59
           MSL    K D+L  ++ L+TG   GIG E +  + ++GA+V ++GR ++ L    S +  
Sbjct: 1   MSLHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE 60
Query: 60  SLGIKAVGFEGDV--RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFR 116
             G +   F  D+     E  +++ +    ++ +LD +L NA     +    +  P  ++
Sbjct: 61  ETGRQPQWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQ 120
Query: 117 TVMDIDSVGTFTMCH 131
            VM ++   TF +  
Sbjct: 121 DVMQVNVNATFMLTQ 135

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG  + 
Sbjct: 17  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 76
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+++ + 
Sbjct: 77  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 136
Query: 126 TFTMCHEALKYLKK 139
              +   AL  LK+
Sbjct: 137 YVVLTVAALPMLKQ 150

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG  + 
Sbjct: 7   FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 66
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+++ + 
Sbjct: 67  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 126
Query: 126 TFTMCHEALKYLKK 139
              +   AL  LK+
Sbjct: 127 YVVLTVAALPMLKQ 140

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKA 65
            K D+L  ++ L+TG   GIG E +  + ++GA+V ++GR ++ L    S +    G + 
Sbjct: 3   LKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQP 62
Query: 66  VGFEGDV--RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
             F  D+     E+ +++ +    ++ +LD +L NA     +    + +P  ++ VM I+
Sbjct: 63  QWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQIN 122
Query: 123 SVGTFTMCH 131
              TF +  
Sbjct: 123 VNATFMLTQ 131

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 21/200 (10%)
Query: 9   ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-----I 63
           A ++ GKVAL+TG   GIG   +      GA VA++      L+A V    +L       
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN---LEAGVQCKAALHEQFEPQ 58
Query: 64  KAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDS 123
           K +  + DV  Q+  +       +HFG+LDILVN A  N        +   +   + I+ 
Sbjct: 59  KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINL 110
Query: 124 VGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRN 183
           V   +  +  L Y+ K            I+N+S+         Q             TR+
Sbjct: 111 VSVISGTYLGLDYMSK----QNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRS 166
Query: 184 LALEWG-ADYDIRVNGIAPG 202
            AL     +  +R+N I PG
Sbjct: 167 AALAANLMNSGVRLNAICPG 186

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 194 IRVNGIAPGPIGDTP--GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           IRVN I+PG        GMN    D +  + + ++P+ K+GE  DIAMA L+   ++  Y
Sbjct: 151 IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQNS--Y 208
Query: 252 VNGTTLIVDGGLWL 265
           + GT + VDGG  L
Sbjct: 209 MTGTVIDVDGGALL 222

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 18  LITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
           ++ G G  IG   + +F + GA+V +      +    AV+ +  LG  A+  + D+    
Sbjct: 12  VVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAA 71
Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAE---DLSPNGFRTVMDIDSVGTFTMCHEA 133
             +  + +  + FG++  LV+ A G  L++ +   ++    +  V+D++    F     A
Sbjct: 72  EVEAAISAAADKFGEIHGLVHVAGG--LIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTA 129
Query: 134 LKYLKKXXXXXXXXXXXXILNISA----------TLHYTASWYQIHXXXXXXXXXXITRN 183
           L  + K            I+  S+           L Y  S   +            TR 
Sbjct: 130 LPKMAKGGA---------IVTFSSQAGRDGGGPGALAYATSKGAV---------MTFTRG 171
Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           LA E G    IRVN + PG I  T   +     E+  +      L + G   D+A    +
Sbjct: 172 LAKEVGPK--IRVNAVCPGMI-STTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAF 228
Query: 244 LTSDTGKYVNGTTLIVDGGLWLS 266
           L SD   YV G    ++GG+  S
Sbjct: 229 LASDDAAYVTGACYDINGGVLFS 251

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 29/259 (11%)
Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVRRQ 75
           ALIT G  G+G +++ +    G SV +        ++      + +  +    + DV ++
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 76  EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE---DLSPNGFRTVMDIDSVGTFTMCHE 132
           E   K+VE    HFGK+D L+N  AG ++   +   D   + +  ++  +    F +   
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLIN-NAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 133 ALKYLKKXXXXXXXXXXXXILNISATLHY-------TASW-YQIHXXXXXXXXXXITRNL 184
            +  ++K              N    ++Y          W Y+            +T+ +
Sbjct: 129 VVPVMRKQ-------------NFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTV 175
Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A E  A+Y I  N + PG I     M +    E         P+ + G   DIA    +L
Sbjct: 176 AYE-EAEYGITANMVCPGDI--IGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFL 232
Query: 245 TSDTGKYVNGTTLIVDGGL 263
             D    + GT + V G +
Sbjct: 233 CEDDSDMITGTIIEVTGAV 251

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 7  FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
          F+ ++L+GK  ++TG   GIG EI+    K GA V +  R K+ L   V+    LG  + 
Sbjct: 4  FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA 63
Query: 67 GF-EGDVRRQEHAKKVVESTFEHFGKLDILV 96
           +  G +     A++ V       G LD+L+
Sbjct: 64 HYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 94

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI--KAVGFE 69
             G+ A +TGG +G+G  +  Q    G  VAI   R+  +D A++ L + G   + +G +
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLS 111
            DV  +E  K   +     FG + IL N A  N     E+ S
Sbjct: 66  LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESS 107

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG  + 
Sbjct: 10  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 69
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+++ + 
Sbjct: 70  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 129
Query: 126 TFTMCHEALKYLKK 139
              +   AL  LK+
Sbjct: 130 YVVLTVAALPMLKQ 143

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 7  FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
          F+ ++L+GK  ++TG   GIG EI+    K GA V +  R K+ L   V+    LG  + 
Sbjct: 4  FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA 63
Query: 67 GF-EGDVRRQEHAKKVVESTFEHFGKLDILV 96
           +  G +     A++ V       G LD+L+
Sbjct: 64 HYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 94

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG 62
           +   F+ ++L+GK  ++TG   GIG EI+    K GA V +  R K+ L   V+    LG
Sbjct: 21  MNEKFRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELG 80
Query: 63  IKAVGF-EGDVRRQEHAKKVVESTFEHFGKLDILV 96
             +  +  G +     A++ V       G LD+L+
Sbjct: 81  AASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 115

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG  + 
Sbjct: 2   FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 61
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+++ + 
Sbjct: 62  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 121
Query: 126 TFTMCHEALKYLKK 139
              +   AL  LK+
Sbjct: 122 YVVLTVAALPMLKQ 135

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG  + 
Sbjct: 21  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 80
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+++ + 
Sbjct: 81  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 140
Query: 126 TFTMCHEALKYLKK 139
              +   AL  LK+
Sbjct: 141 YVVLTVAALPMLKQ 154

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    LG  + 
Sbjct: 24  FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 83
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ V    +  G LD+L+     N  ++      +  R  M+++ + 
Sbjct: 84  HYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 143
Query: 126 TFTMCHEALKYLKK 139
              +   AL  LK+
Sbjct: 144 YVVLTVAALPMLKQ 157

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 60/126 (47%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVALITG  SGIG   +      GA+VAI  RR + L A    L + G K    E D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++     V ST E  G LDILVN A    L   ED     +   +D + +G      
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXIDTNLLGLXYXTR 124
Query: 132 EALKYL 137
            AL +L
Sbjct: 125 AALPHL 130

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 7  FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
          F+ ++L+GK  ++TG   GIG EI+    K GA V +  R K+ L   V+    LG  + 
Sbjct: 2  FRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASA 61
Query: 67 GF-EGDVRRQEHAKKVVESTFEHFGKLDILV 96
           +  G +     A++ V       G LD+L+
Sbjct: 62 HYIAGSMEDMTFAEEFVAEAGNLMGGLDMLI 92

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R ++ L   VS    LG  + 
Sbjct: 11  FRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASA 70
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ +    +  G LD+L+        +S      +  R VM+++ + 
Sbjct: 71  HYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLS 130
Query: 126 TFTMCHEALKYLKK 139
              M   AL  LK+
Sbjct: 131 YVVMSTAALPMLKQ 144

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+ ++L+GK  ++TG   GIG E++    K GA V +  R ++ L   VS    LG  + 
Sbjct: 2   FRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASA 61
Query: 67  GF-EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVG 125
            +  G +     A++ +    +  G LD+L+        +S      +  R VM+++ + 
Sbjct: 62  HYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLS 121
Query: 126 TFTMCHEALKYLKK 139
              M   AL  LK+
Sbjct: 122 YVVMSTAALPMLKQ 135

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 16/261 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG VA+ITGG SG+G   + +    GAS  ++       +A     + LG   V    D
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA---KKLGNNCVFAPAD 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL------SPNGFRTVMDIDSVG 125
           V  ++  +  +      FG++D+ VN A         +L      +   F+ V+D++ +G
Sbjct: 65  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 124
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
           TF +       + +            I+N ++   +     Q            +T  +A
Sbjct: 125 TFNVIRLVAGEMGQ-NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYL 244
            +  A   IRV  IAPG  G TP +  L P+++ +     +P   +LG+  + A     +
Sbjct: 184 RDL-APIGIRVMTIAPGLFG-TPLLTSL-PEKVRNFLASQVPFPSRLGDPAEYAHLVQAI 240
Query: 245 TSDTGKYVNGTTLIVDGGLWL 265
             +   ++NG  + +DG + +
Sbjct: 241 IEN--PFLNGEVIRLDGAIRM 259

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAV 66
           K D+L  ++ L+TG   GIG E +  + ++GA+V ++GR ++ L    S +    G +  
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65
Query: 67  GFEGDV--RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTVMDIDS 123
            F  D+     E+ +++ +    ++ +LD +L NA     +    + +P  ++ VM ++ 
Sbjct: 66  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125
Query: 124 VGTFTMCH 131
             TF +  
Sbjct: 126 NATFMLTQ 133

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 118/289 (40%), Gaps = 46/289 (15%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALR---SLGIKA--- 65
           VAL+TG    +G  I+      G +V +   R       L A ++A R   ++ ++A   
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107
Query: 66  -------VGFEGD--VRRQEHAKKVVESTFEHFGKLDILVNAAAGNF----LVSAED-LS 111
                   G +G   V       ++V + + H+G+ D+LVN A+  +    L + ED   
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 167
Query: 112 PN-GFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXX-------XILN-ISATLHYT 162
           P  G R  M+  +   F     A  +L K                   I+N + A  +  
Sbjct: 168 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 227
Query: 163 ASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---PDEIN 219
              Y I+          +TR+ ALE  A   IRVNG+ PG       ++ L    P  + 
Sbjct: 228 LLGYTIYTMAKGALEG-LTRSAALEL-APLQIRVNGVGPG-------LSVLVDDMPPAVW 278
Query: 220 SKARDYMPLYKL-GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
              R  +PLY+      +++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 279 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 327

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALR---SLGIKA--- 65
           VAL+TG    +G  I+      G +V +   R       L A ++A R   ++ ++A   
Sbjct: 8   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 67
Query: 66  -------VGFEGD--VRRQEHAKKVVESTFEHFGKLDILVNAAAGNF----LVSAED-LS 111
                   G +G   V       ++V + + H+G+ D+LVN A+  +    L + ED   
Sbjct: 68  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 127
Query: 112 PN-GFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXX-------XILN-ISATLHYT 162
           P  G R  M+  +   F     A  +L K                   I+N + A  +  
Sbjct: 128 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 187
Query: 163 ASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA 222
              Y I+          +TR+ ALE  A   IRVNG+ PG       M    P  +    
Sbjct: 188 LLGYTIYTMAKGALEG-LTRSAALEL-APLQIRVNGVGPGLSVLVDDM----PPAVWEGH 241
Query: 223 RDYMPLYKL-GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
           R  +PLY+      +++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 242 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 287

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALR---SLGIKA--- 65
           VAL+TG    +G  I+      G +V +   R       L A ++A R   ++ ++A   
Sbjct: 27  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 86
Query: 66  -------VGFEGD--VRRQEHAKKVVESTFEHFGKLDILVNAAAGNF----LVSAED-LS 111
                   G +G   V       ++V + + H+G+ D+LVN A+  +    L + ED   
Sbjct: 87  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 146
Query: 112 PN-GFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXX-------XILN-ISATLHYT 162
           P  G R  M+  +   F     A  +L K                   I+N + A  +  
Sbjct: 147 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 206
Query: 163 ASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA 222
              Y I+          +TR+ ALE  A   IRVNG+ PG       M    P  +    
Sbjct: 207 LLGYTIYTMAKGALEG-LTRSAALEL-APLQIRVNGVGPGLSVLVDDM----PPAVWEGH 260
Query: 223 RDYMPLYKL-GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
           R  +PLY+      +++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 261 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 306

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 40/286 (13%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALR---SLGIKA--- 65
           VAL+TG    +G  I+      G +V +   R       L A ++A R   ++ ++A   
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 66  -------VGFEGD--VRRQEHAKKVVESTFEHFGKLDILVNAAAGNF----LVSAED-LS 111
                   G +G   V       ++V + + H+G+ D+LVN A+  +    L + ED   
Sbjct: 71  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 130
Query: 112 PN-GFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXX-------XILN-ISATLHYT 162
           P  G R  M+  +   F     A  +L K                   I+N + A  +  
Sbjct: 131 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 190
Query: 163 ASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA 222
              Y I+          +TR+ ALE  A   IRVNG+ PG       M    P  +    
Sbjct: 191 LLGYTIYTMAKGALEG-LTRSAALEL-APLQIRVNGVGPGLSVLVDDM----PPAVWEGH 244
Query: 223 RDYMPLYKL-GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
           R  +PLY+      +++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 245 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 290

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 16/261 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG VA+ITGG SG+G   + +    GAS  ++       +A     + LG   V    D
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA---KKLGNNCVFAPAD 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL------SPNGFRTVMDIDSVG 125
           V  ++  +  +      FG++D+ VN A         +L      +   F+ V+D++ +G
Sbjct: 65  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 124
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
           TF +       + +            I+N ++   +     Q            +T  +A
Sbjct: 125 TFNVIRLVAGEMGQ-NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYL 244
            +  A   IRV  IAPG  G TP +  L P+++ +     +P   +LG+  + A     +
Sbjct: 184 RDL-APIGIRVMTIAPGLFG-TPLLTSL-PEKVCNFLASQVPFPSRLGDPAEYAHLVQAI 240
Query: 245 TSDTGKYVNGTTLIVDGGLWL 265
             +   ++NG  + +DG + +
Sbjct: 241 IEN--PFLNGEVIRLDGAIRM 259

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 109/261 (41%), Gaps = 16/261 (6%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG VA+ITGG SG+G   + +    GAS  ++       +A     + LG   V    D
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA---KKLGNNCVFAPAD 66
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL------SPNGFRTVMDIDSVG 125
           V  ++  +  +      FG++D+ VN A         +L      +   F+ V+D++ +G
Sbjct: 67  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
           TF +       + +            I+N ++   +     Q            +T  +A
Sbjct: 127 TFNVIRLVAGEMGQ-NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 185
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYL 244
            +  A   IRV  IAPG  G TP +  L P+++ +     +P   +LG+  + A     +
Sbjct: 186 RDL-APIGIRVMTIAPGLFG-TPLLTSL-PEKVCNFLASQVPFPSRLGDPAEYAHLVQAI 242
Query: 245 TSDTGKYVNGTTLIVDGGLWL 265
             +   ++NG  + +DG + +
Sbjct: 243 IEN--PFLNGEVIRLDGAIRM 261

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 108/266 (40%), Gaps = 28/266 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG G+GIG  ++ +    G  V          DAA +    +G  A     D
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT---KIGCGAAACRVD 83
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC- 130
           V  ++    +V++    FG +D LV  A    L S  D +   F  V+ I+  G + +C 
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAW-LCT 142
Query: 131 -HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWG 189
            H A + +++            I+N+S+     A                ++R  A E  
Sbjct: 143 KHAAPRMIER--------GGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAEL- 193
Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK-----ARDYMPLY--KLGEKWDIAMAAL 242
               IR N + P  + DTP M + A    +       AR  +     ++    ++A   +
Sbjct: 194 RSSGIRSNTLLPAFV-DTP-MQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVV 251
Query: 243 YLTSDTGKYVNGTTLIVDGG----LW 264
           +L SD    + GTT I DGG    LW
Sbjct: 252 FLLSDDASMITGTTQIADGGTIAALW 277

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-E 69
           + K + A++TGG  GIGFEI  Q   +G  V +  R       AV  L++   + V F +
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68
Query: 70  GDVRRQ-EHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAE 108
            DV         + +    HFGKLDILV NA    F V A+
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDAD 109

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
          KV LITG   GIG  I+ + G  GA + +  RR+  ++A  + +R  G  A+    DV  
Sbjct: 5  KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 75 QEHAKKVVESTFEHFGKLDILVNAA 99
          +       ++  + +G++D+LVN A
Sbjct: 65 RHSVAAFAQAAVDTWGRIDVLVNNA 89

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 38/257 (14%)
Query: 6   PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA-AVSALRSLGIK 64
           P  + +L+ KVA+ITG   GIG  I+    + G ++A+  R    L+  A   ++  G++
Sbjct: 16  PRGSHMLEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE 75
Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
                 DV + E  ++  +   E FG +D++V  A   +    E+LS   F  +++++ +
Sbjct: 76  VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLL 135
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATL------HYTASWYQIHXXXXXXXXX 178
           G +      L  LK+              ++SA L      + +  W             
Sbjct: 136 GVWRTLKAFLDSLKRTGGLALVTTS----DVSARLIPYGGGYVSTKW----------AAR 181
Query: 179 XITRNLALEWGADYDIRVNGIAPGPI-----GDTPGMNK----LAPDEINSKARDYMPLY 229
            + R   +E   + D+R   + PG +     G  PG  K    L PDEI    R  + L 
Sbjct: 182 ALVRTFQIE---NPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLP 238
Query: 230 KLGEKWDIAMAALYLTS 246
           K     D+ +  L L S
Sbjct: 239 K-----DVRVEELMLRS 250

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           +VAL+TG   GIGF I     +  A  V +  R      AAV  L++ G+     + D+ 
Sbjct: 5   RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 64
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRT----VMDIDSVGTFTM 129
             +  + + +   + +G LD+LVN AA  F +     +P  F       M  + +GT  +
Sbjct: 65  DLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLD----NPTPFHIQAELTMKTNFMGTRNV 120
Query: 130 CHEALKYLK 138
           C E L  +K
Sbjct: 121 CTELLPLIK 129

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG VA+ITGG SG+G   + +    GA+  ++           +  + LG   +    +
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPN---SEGETEAKKLGGNCIFAPAN 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA-----------GNFLVSAEDLSPNGFRTVMD 120
           V  ++  +  +    E FG++D+ VN A             N + + ED     F+ V++
Sbjct: 65  VTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLED-----FQRVIN 119
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXI 180
           ++ +GTF +       + +            I+N ++   +     Q            +
Sbjct: 120 VNLIGTFNVIRLVAGVMGQ-NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAM 239
           T  +A +  A   IRV  IAPG +  TP +  L PD++ +     +P   +LG+  + A 
Sbjct: 179 TLPIARDL-APIGIRVVTIAPG-LFATPLLTTL-PDKVRNFLASQVPFPSRLGDPAEYAH 235
Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWLS 266
               +  +   ++NG  + +DG + + 
Sbjct: 236 LVQMVIEN--PFLNGEVIRLDGAIRMQ 260

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG VA+ITGG SG+G   + +    GA+  ++           +  + LG   +    +
Sbjct: 7   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPN---SEGETEAKKLGGNCIFAPAN 63
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA-----------GNFLVSAEDLSPNGFRTVMD 120
           V  ++  +  +    E FG++D+ VN A             N + + ED     F+ V++
Sbjct: 64  VTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLED-----FQRVIN 118
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXI 180
           ++ +GTF +       + +            I+N ++   +     Q            +
Sbjct: 119 VNLIGTFNVIRLVAGVMGQ-NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 177
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAM 239
           T  +A +  A   IRV  IAPG +  TP +  L PD++ +     +P   +LG+  + A 
Sbjct: 178 TLPIARDL-APIGIRVVTIAPG-LFATPLLTTL-PDKVRNFLASQVPFPSRLGDPAEYAH 234
Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWLS 266
               +  +   ++NG  + +DG + + 
Sbjct: 235 LVQMVIEN--PFLNGEVIRLDGAIRMQ 259

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 78/208 (37%), Gaps = 12/208 (5%)
Query: 4   ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIM----------GRRKQVLDA 53
           + P    ++ G+V ++TG G GIG   +  F   GA V +                   +
Sbjct: 17  QGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS 76
Query: 54  AVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPN 113
            V  + + G +AV    +V   + A  ++++  E FG LD+LVN A         + S  
Sbjct: 77  VVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEE 136
Query: 114 GFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXX 173
            F  V+ +   G F     A  Y +             I+N S+      S  Q +    
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWRG-LSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAA 195
Query: 174 XXXXXXITRNLALEWGADYDIRVNGIAP 201
                 +T   A E G  Y + VN IAP
Sbjct: 196 KAGIATLTLVGAAEMG-RYGVTVNAIAP 222

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 99/256 (38%), Gaps = 24/256 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVG--FE 69
           L GKVA++TG   GIG  I+  F + GA+V  +      +D A   L+ +  K  G    
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAID-----VDGAAEDLKRVADKVGGTALT 265
Query: 70  GDVRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI---DSVG 125
            DV   +   K+     EH  GK+DILVN A     ++ + L  N     MD    D+V 
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAG----ITRDKLLAN-----MDEKRWDAVI 316
Query: 126 TFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLA 185
              +     +  +             ++ +S+      +  Q +          +   LA
Sbjct: 317 AVNLLAPQ-RLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALA 375
Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
               AD  I +N +APG I     M +  P       R    L++ G+  D+A    Y  
Sbjct: 376 PVL-ADKGITINAVAPGFI--ETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFA 432
Query: 246 SDTGKYVNGTTLIVDG 261
           S     V G T+ V G
Sbjct: 433 SPASNAVTGNTIRVCG 448

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 15/254 (5%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA---VSALRSLGIKAVGF 68
           LK KV +I GG   +G   +  F     ++ +   + +  D A      L   G K   +
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           + D+  +E   K+ +   + FGK+DI +N           + S   F  +  I++   + 
Sbjct: 69  QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128
Query: 129 MCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEW 188
              +A K++              I+ I+ +L    + +              TR  + E 
Sbjct: 129 FIKQAAKHMNP---------NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKEL 179
Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
                I VN IAPGP+ DT         E  +  +      +L +  DIA    +LT+D 
Sbjct: 180 -MKQQISVNAIAPGPM-DTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD- 236
Query: 249 GKYVNGTTLIVDGG 262
           G ++NG T+  +GG
Sbjct: 237 GWWINGQTIFANGG 250

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 20/262 (7%)
Query: 7   FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
           F+++ +   V L+TG   GIG  I+ Q    G ++ +   R    DAA +      I A 
Sbjct: 20  FQSNAMSRSV-LVTGASKGIGRAIARQLAADGFNIGVHYHR----DAAGAQETLNAIVAN 74
Query: 67  GFEG-----DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI 121
           G  G     DV  +E  ++V+E      G    +V+ A      +   LS + +  V+  
Sbjct: 75  GGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHT 134
Query: 122 DSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXIT 181
           +    + +    +  +              I+ +S+      +  Q++           T
Sbjct: 135 NLDSFYNVIQPCIMPM------IGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGAT 188
Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           + LA+E  A   I VN IAPG I DT GM ++    +  +A   +P+ ++G+  ++A  A
Sbjct: 189 KALAIEL-AKRKITVNCIAPGLI-DT-GMIEMEESAL-KEAMSMIPMKRMGQAEEVAGLA 244
Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            YL SD   YV    + ++GG+
Sbjct: 245 SYLMSDIAGYVTRQVISINGGM 266

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAV 66
           K D+L  ++ L+TG   GIG E +  + ++GA+V ++GR ++ L    S +    G +  
Sbjct: 27  KQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 86
Query: 67  GFEGDV--RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTVMDIDS 123
            F  D+     E+ +++ +    ++ +LD +L NA     +    + +P  ++ V  I+ 
Sbjct: 87  WFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINV 146
Query: 124 VGTF 127
             TF
Sbjct: 147 NATF 150

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 110/267 (41%), Gaps = 26/267 (9%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG VA+ITGG SG+G   + +    GA+  ++           +  + LG   +    +
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPN---SEGETEAKKLGGNCIFAPAN 64
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAA-----------GNFLVSAEDLSPNGFRTVMD 120
           V  ++  +  +    E FG++D+ VN A             N + + ED     F+ V++
Sbjct: 65  VTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLED-----FQRVIN 119
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXI 180
           ++ +GTF +       + +            I+N ++   +     Q            +
Sbjct: 120 VNLIGTFNVIRLVAGVMGQ-NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAM 239
           T  +A +  A   IRV  IAPG +  TP +  L PD + +     +P   +LG+  + A 
Sbjct: 179 TLPIARDL-APIGIRVVTIAPG-LFATPLLTTL-PDTVRNFLASQVPFPSRLGDPAEYAH 235
Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWLS 266
               +  +   ++NG  + +DG + + 
Sbjct: 236 LVQMVIEN--PFLNGEVIRLDGAIRMQ 260

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAV 66
           K D+L  ++ L+TG   GIG E +  + ++GA+V ++GR ++ L    S +    G +  
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65
Query: 67  GFEGDV--RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTVMDIDS 123
            F  D+     E+ +++ +    ++ +LD +L NA     +    + +P  ++ V  ++ 
Sbjct: 66  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNV 125
Query: 124 VGTF 127
             TF
Sbjct: 126 NATF 129

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 15  KVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           +VAL+TG   GIG  I+ +  +     V +  R      AAV  L++ G+     + D+ 
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDID 62
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDS--VGTFTMCH 131
             +  + + +   + +G L++LVN AA  F   ++D  P   +  M + +    T  MC+
Sbjct: 63  DLQSIRALRDFLRKEYGGLNVLVNNAAVAF--KSDDPMPFDIKAEMTLKTNFFATRNMCN 120
Query: 132 EALKYLK 138
           E L  +K
Sbjct: 121 ELLPIMK 127

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAV 66
           K D+L+ ++ L+TG   GIG E +  + ++GA+V ++GR ++ L      +     ++  
Sbjct: 9   KQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQ 68
Query: 67  GFEGDV--RRQEHAKKVVESTFEHFGKLD-ILVNAAAGNFLVSAEDLSPNGFRTVMDIDS 123
            F  D+     E  ++V +    H+ +LD +L NA     +    +  P  ++ V  ++ 
Sbjct: 69  WFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNV 128
Query: 124 VGTF 127
             TF
Sbjct: 129 NATF 132

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 95/252 (37%), Gaps = 8/252 (3%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L GK ALITG   GIG +I+  F   GA + + GR    LDAA  AL    G        
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77
Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+   +   ++     E FG LD+LVN A  +      D  P  F      D+     + 
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLF------DATIAVNLR 131
Query: 131 HEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGA 190
             AL                 I+ +++                       T+ LA E G 
Sbjct: 132 APALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGP 191
Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            + IR N + P  +    G      +  ++     +PL +     +++ A ++L SD   
Sbjct: 192 -HGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAAS 250
Query: 251 YVNGTTLIVDGG 262
            +NG  + VDGG
Sbjct: 251 MINGVDIPVDGG 262

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGD--TPGMNKLAPDEINSKARDY----MPLYKLGEK 234
           TR LA E G  Y +RVN I+ GP+       + K         A DY     PL +    
Sbjct: 204 TRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHS 263
Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            D+  AAL+L S   + V+G TL VD GL
Sbjct: 264 DDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGD--TPGMNKLAPDEINSKARDY----MPLYKLGEK 234
           TR LA E G  Y +RVN I+ GP+       + K         A DY     PL +    
Sbjct: 204 TRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHS 263
Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            D+  AAL+L S   + V+G TL VD GL
Sbjct: 264 DDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEIN-SKAR-DYMPLYKLGE---KWDIAMAALYLTSDT 248
           IR N + PG + DTP + +      N  +AR D++   K G      +IAM  +YL SD 
Sbjct: 170 IRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE 228
Query: 249 GKYVNGTTLIVDGG 262
             YV G  +I+DGG
Sbjct: 229 SAYVTGNPVIIDGG 242

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 36/269 (13%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA--VSALRSLGIKAVGFEGDV 72
           KVA++TGG  GIG  IS +    G  +A+    +Q   AA  +  + +   KAV    DV
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFL-----VSAEDL----SPNGFRTVMDIDS 123
             + +    ++   E  G  D+LVN A    +     V+ EDL    S N F     I +
Sbjct: 63  TDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQA 122
Query: 124 VGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRN 183
               +   + L    K               +SA   Y+ + + +           +T+ 
Sbjct: 123 A---SRKFDELGVKGKIINAASIAAIQGFPILSA---YSTTKFAVR---------GLTQA 167
Query: 184 LALEWGADYDIRVNGIAPGPIGD------TPGMNKLAPDEINSKARDYMPLYKLGE---K 234
            A E  A     VN  APG +G          ++K+    I    ++Y     LG     
Sbjct: 168 AAQEL-APKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVP 226
Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            D+A    +L S+   YV G  ++VDGG+
Sbjct: 227 EDVAGLVSFLASENSNYVTGQVMLVDGGM 255

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----------APDEINSKARDYMPLYK 230
           T++LAL+  A Y IRVN + PG + DT     L          + DE   +     PL +
Sbjct: 151 TKSLALDL-AKYQIRVNTVCPGTV-DTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNR 208
Query: 231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
           + +  +IA   ++L SD  K+  G  + +DGG
Sbjct: 209 IAQPQEIAELVIFLLSDKSKFXTGGLIPIDGG 240

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 38/248 (15%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA-AVSALRSLGIKAVGFEGDVR 73
           KVA+ITG   GIG  I+    + G ++A+  R    L+  A   ++  G++      DV 
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 62
Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
           + E  ++  +   E FG +D++V  A   +    E+LS   F  +++++ +G +      
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122
Query: 134 LKYLKKXXXXXXXXXXXXILNISATL------HYTASWYQIHXXXXXXXXXXITRNLALE 187
           L  LK+              ++SA L      + +  W              + R   +E
Sbjct: 123 LDSLKRTGGLALVTTS----DVSARLIPYGGGYVSTKW----------AARALVRTFQIE 168
Query: 188 WGADYDIRVNGIAPGPI-----GDTPGMNK----LAPDEINSKARDYMPLYKLGEKWDIA 238
              + D+R   + PG +     G  PG  K    L PDEI    R  + L K     D+ 
Sbjct: 169 ---NPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLPK-----DVR 220
Query: 239 MAALYLTS 246
           +  L L S
Sbjct: 221 VEELMLRS 228

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 99/260 (38%), Gaps = 28/260 (10%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GK   +TG G GIG+  +  F + GA V          D A +  +      V    D
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVT-------GFDQAFTQEQYPFATEV---MD 54
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V       +V +       +LD LVNAA    + + + LS   ++    ++  G F +  
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
           + +   ++            I+ +++   +T                 +  ++ LE  A 
Sbjct: 115 QTMNQFRR-------QRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLEL-AG 166
Query: 192 YDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDY-------MPLYKLGEKWDIAMAAL 242
             +R N ++PG   DT     L  + D    + R +       +PL K+    +IA   L
Sbjct: 167 SGVRCNVVSPGST-DTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL 225
Query: 243 YLTSDTGKYVNGTTLIVDGG 262
           +L SD   ++    ++VDGG
Sbjct: 226 FLASDLASHITLQDIVVDGG 245

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGD--TPGMNKLAPDEINSKARDY----MPLYKLGEK 234
            R LA E G    +RVN I+ GP+       + K         A DY     PL K  E 
Sbjct: 217 CRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELES 276
Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            D+  AAL+L S   + V G TL VD GL
Sbjct: 277 DDVGRAALFLLSPLARAVTGATLYVDNGL 305

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 20/254 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG   GIG  I+  F + GA V  +       + A +A +   +       D
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---VGGTALWLD 288
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI---DSVGTF 127
           V   +   K+ E   +H  GK DILVN    N  ++ + L  N     MD    D+V   
Sbjct: 289 VTADDAVDKISEHLRDHHGGKADILVN----NAGITRDKLLAN-----MDDARWDAVLAV 339
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+  +             ++ +S+      +  Q +          IT+ LA  
Sbjct: 340 NLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 398
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   I +N +APG I     M    P       R    L + G+  D+A A  Y  S 
Sbjct: 399 LAAK-GITINAVAPGFIETQ--MTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFASP 455
Query: 248 TGKYVNGTTLIVDG 261
               V G  + V G
Sbjct: 456 ASNAVTGNVIRVCG 469

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 20/254 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG   GIG  I+  F + GA V  +       + A +A +   +       D
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---VGGTALWLD 275
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMD---IDSVGTF 127
           V   +   K+ E   +H  GK DILVN    N  ++ + L  N     MD    D+V   
Sbjct: 276 VTADDAVDKISEHLRDHHGGKADILVN----NAGITRDKLLAN-----MDDARWDAVLAV 326
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+  +             ++ +S+      +  Q +          IT+ LA  
Sbjct: 327 NLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 385
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   I +N +APG I     M    P       R    L + G+  D+A A  Y  S 
Sbjct: 386 LAAK-GITINAVAPGFIETQ--MTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFASP 442
Query: 248 TGKYVNGTTLIVDG 261
               V G  + V G
Sbjct: 443 ASNAVTGNVIRVCG 456

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 20/254 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG   GIG  I+  F + GA V  +       + A +A +   +       D
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---VGGTALWLD 251
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMD---IDSVGTF 127
           V   +   K+ E   +H  GK DILVN    N  ++ + L  N     MD    D+V   
Sbjct: 252 VTADDAVDKISEHLRDHHGGKADILVN----NAGITRDKLLAN-----MDDARWDAVLAV 302
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+  +             ++ +S+      +  Q +          IT+ LA  
Sbjct: 303 NLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 361
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   I +N +APG I     M    P       R    L + G+  D+A A  Y  S 
Sbjct: 362 LAAK-GITINAVAPGFIETQ--MTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFASP 418
Query: 248 TGKYVNGTTLIVDG 261
               V G  + V G
Sbjct: 419 ASNAVTGNVIRVCG 432

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 101/261 (38%), Gaps = 22/261 (8%)
Query: 11  ILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF 68
           +L+GK ALITG  +   I + I+  F + GA +A      ++        +  G   V  
Sbjct: 18  LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV-V 76
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSV 124
           + DV   E  K + +   E++G LDI+V++ A      F     D S  GF+  MDI   
Sbjct: 77  KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY 136
Query: 125 GTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXI---T 181
               +  E L  ++             I+ +S   +Y A     H          +    
Sbjct: 137 SLIALTRELLPLME--------GRNGAIVTLS---YYGAEKVVPHYNVMGIAKAALESTV 185
Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           R LA +  A +  R+N I+ GP+      +      +        P  K     D+   A
Sbjct: 186 RYLAYDI-AKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTA 244
Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
           ++L SD  + + G  + VD G
Sbjct: 245 VFLCSDWARAITGEVVHVDNG 265

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 20/254 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG   GIG  I+  F + GA V  +       + A +A +   +       D
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---VGGTALWLD 259
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMD---IDSVGTF 127
           V   +   K+ E   +H  GK DILVN    N  ++ + L  N     MD    D+V   
Sbjct: 260 VTADDAVDKISEHLRDHHGGKADILVN----NAGITRDKLLAN-----MDDARWDAVLAV 310
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+  +             ++ +S+      +  Q +          IT+ LA  
Sbjct: 311 NLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 369
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   I +N +APG I     M    P       R    L + G+  D+A A  Y  S 
Sbjct: 370 LAAK-GITINAVAPGFIETQ--MTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFASP 426
Query: 248 TGKYVNGTTLIVDG 261
               V G  + V G
Sbjct: 427 ASNAVTGNVIRVCG 440

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 20/254 (7%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG   GIG  I+  F + GA V  +       + A +A +   +       D
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAETASK---VGGTALWLD 267
Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMD---IDSVGTF 127
           V   +   K+ E   +H  GK DILVN    N  ++ + L  N     MD    D+V   
Sbjct: 268 VTADDAVDKISEHLRDHHGGKADILVN----NAGITRDKLLAN-----MDDARWDAVLAV 318
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +    L+  +             ++ +S+      +  Q +          IT+ LA  
Sbjct: 319 NLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 377
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             A   I +N +APG I     M    P       R    L + G+  D+A A  Y  S 
Sbjct: 378 LAAK-GITINAVAPGFIETQ--MTAAIPLATREVGRRLNSLLQGGQPVDVAEAIAYFASP 434
Query: 248 TGKYVNGTTLIVDG 261
               V G  + V G
Sbjct: 435 ASNAVTGNVIRVCG 448

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 5/130 (3%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVA-----IMGRRKQVLDAAVSALRSLGIKAVGFE 69
           K+ LITG  SG G   +      G  V      I+GR    ++A     R   +     E
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARDNDVDLRTLE 65
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV+ Q    + ++      G++D+L++ A       AE  +P  F  + DI+ + T  +
Sbjct: 66  LDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTPEQFAELYDINVLSTQRV 125
Query: 130 CHEALKYLKK 139
              AL + ++
Sbjct: 126 NRAALPHXRR 135

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 104/271 (38%), Gaps = 45/271 (16%)
Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           L GK AL+ G      +GF I+ +  + GA VA+  + +++   A     +LG  A+ F 
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFR 64
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRTVMDI 121
            DV + E    +     E FG LD LV+A A        G ++    D     +   +++
Sbjct: 65  ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI----DTRRQDWLLALEV 120
Query: 122 DSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-----YQIHXXXXXXX 176
            +     +   A   L++                  TL Y AS      Y +        
Sbjct: 121 SAYSLVAVARRAEPLLREGGGI-------------VTLTYYASEKVVPKYNVMAIAKAAL 167
Query: 177 XXXITRNLALEWGADYDIRVNGIAPGPI-----GDTPGMNKLAPDEINSKARDYMPLYKL 231
              + R LA E G    +RVN I+ GP+        PG  K+  D +   A    PL + 
Sbjct: 168 EASV-RYLAYELGPK-GVRVNAISAGPVRTVAARSIPGFTKMY-DRVAQTA----PLRRN 220
Query: 232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             + ++    L+L S     + G  + VD G
Sbjct: 221 ITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
             GD+R   +A  +  +     G+LDI+VN A         + +   +   + ++    F
Sbjct: 71  LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPF 130
Query: 128 TMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALE 187
            +C  A+                 I+N+++                      +T+    +
Sbjct: 131 RICRAAIPLXAAAGGGA-------IVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXD 183
Query: 188 WGADYDIRVNGIAPGPIGDTPGMNK------LAPDEINSKARDYMPLYKLGEKWDIAMAA 241
             A   IR+N + P  + +TP +          PD   ++    +PL ++ E  DIA   
Sbjct: 184 H-APQGIRINAVCPNEV-NTPXLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVV 241
Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
           L+L SD  +Y+ G+ + V+GG
Sbjct: 242 LFLASDAARYLCGSLVEVNGG 262

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 108/275 (39%), Gaps = 51/275 (18%)
Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF 68
            LKGK  LI G      I + I+      GA++A     + +        + L    V +
Sbjct: 3   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYV-Y 61
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRTVMD 120
           E DV ++EH K +  S  +  G LD +V++ A        G+ L    + S + F T M+
Sbjct: 62  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL----ETSKSAFNTAME 117
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISA---TLHYTASW-YQIHXXXXXXX 176
           I SV +       LK L               LN  A   TL Y  S  Y  H       
Sbjct: 118 I-SVYSLIELTNTLKPL---------------LNNGASVLTLSYLGSTKYMAHYNVMGLA 161
Query: 177 XXXI---TRNLALEWGADYDIRVNGIAPGPI------GDTPGMNKLAPDEINSKARDYMP 227
              +    R LA++ G  + IRVN ++ GPI      G       L  +EIN+  R  + 
Sbjct: 162 KAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVS 220
Query: 228 LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
           L ++G       A +YL S     V+G    VD G
Sbjct: 221 LEEVGN------AGMYLLSSLSSGVSGEVHFVDAG 249

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 104/257 (40%), Gaps = 13/257 (5%)
Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           VA++TGG  GIG  I+      G  +AI G    + +   ++ L  LG + +    D+  
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFTMCHE 132
               +  V++    FG++D LVN A    +V  +  DL P  F T++ ++  GT      
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQA 150
Query: 133 ALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADY 192
            L    K            I+NI++      S  ++            ++ LAL   A+ 
Sbjct: 151 VL----KAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRL-AET 205
Query: 193 DIRVNGIAPGPI--GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            I V  + PG I    T  ++      I S     +P  + GE  DI      L      
Sbjct: 206 GIAVFEVRPGIIRSDXTAAVSGKYDGLIESG---LVPXRRWGEPEDIGNIVAGLAGGQFG 262
Query: 251 YVNGTTLIVDGGLWLSR 267
           +  G+ +  DGGL + R
Sbjct: 263 FATGSVIQADGGLSIGR 279

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 103/271 (38%), Gaps = 45/271 (16%)
Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           L GK AL+ G      +GF I+ +  + GA VA+  + +++   A     +LG  A+ F 
Sbjct: 6   LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFR 64
Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRTVMDI 121
            DV + E    +     E FG LD LV+A A        G ++    D     +   +++
Sbjct: 65  ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAXEGRYI----DTRRQDWLLALEV 120
Query: 122 DSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-----YQIHXXXXXXX 176
            +     +   A   L++                  TL Y AS      Y +        
Sbjct: 121 SAYSLVAVARRAEPLLREGGGI-------------VTLTYYASEKVVPKYNVXAIAKAAL 167
Query: 177 XXXITRNLALEWGADYDIRVNGIAPGPI-----GDTPGMNKLAPDEINSKARDYMPLYKL 231
              + R LA E G    +RVN I+ GP+        PG  K   D +   A    PL + 
Sbjct: 168 EASV-RYLAYELGPK-GVRVNAISAGPVRTVAARSIPGFTK-XYDRVAQTA----PLRRN 220
Query: 232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             + ++    L+L S     + G  + VD G
Sbjct: 221 ITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251

>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier Protein Reductase Complexed With Nad And Triclosan Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 20/192 (10%)
Query: 79  KKVVESTFEHFGKLDILVNAAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFTMCHEALKY 136
           ++  E   + FG +DILV++ A    VS    + S  G+   +   S    ++    L  
Sbjct: 107 QEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 166
Query: 137 LKKXXXXXXXXXXXXILNISATLHYTAS-----WYQIHXXXXXXXXXXITRNLALEWGAD 191
           +                  S +L Y AS      Y              TR LA E G  
Sbjct: 167 MNPGGA-------------SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 213
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
            +IRVN I+ GP+G          D +   + +  P+ K     ++  AA +L S     
Sbjct: 214 QNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASA 273
Query: 252 VNGTTLIVDGGL 263
           + G T+ VD GL
Sbjct: 274 ITGATIYVDNGL 285

>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH 8.0 AND Room Temperature Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 20/192 (10%)
Query: 79  KKVVESTFEHFGKLDILVNAAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFTMCHEALKY 136
           ++  E   + FG +DILV++ A    VS    + S  G+   +   S    ++    L  
Sbjct: 117 QEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 176
Query: 137 LKKXXXXXXXXXXXXILNISATLHYTASW-----YQIHXXXXXXXXXXITRNLALEWGAD 191
           +                  S +L Y AS      Y              TR LA E G  
Sbjct: 177 MNPGGA-------------SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 223
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
            +IRVN I+ GP+G          D +   + +  P+ K     ++  AA +L S     
Sbjct: 224 QNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASA 283
Query: 252 VNGTTLIVDGGL 263
           + G T+ VD GL
Sbjct: 284 ITGATIYVDNGL 295

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 16  VALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           VAL+TGG  GIG  I     +     V +  R      AAV  L++ G+     + D+  
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFR--TVMDIDSVGTFTMCHE 132
            +  + + +   + +G LD+LVN A   F V+  D +P   +    M  +  GT  +C E
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA--DPTPFHIQAEVTMKTNFFGTRDVCTE 123
Query: 133 ALKYLK 138
            L  +K
Sbjct: 124 LLPLIK 129

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 31/266 (11%)
Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGF 68
           L+ K  +I G      I F ++    + GA +    R+++        L  L   +A  +
Sbjct: 4   LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 63
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL-------SPNGFRTVMDI 121
           + DV+  E      E   +  G +D + ++ A     + EDL       S  GF    DI
Sbjct: 64  QIDVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDI 120
Query: 122 DSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLH----YTASWYQIHXXXXXXXX 177
            S     + HEA K + +              +I AT +    +    Y +         
Sbjct: 121 SSYSLTIVAHEAKKLMPEGG------------SIVATTYLGGEFAVQNYNVMGVAKASLE 168
Query: 178 XXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI 237
             + + LAL+ G D +IRVN I+ GPI           + I  + ++  PL +  ++ ++
Sbjct: 169 ANV-KYLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEV 226
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGL 263
              A YL SD    V G  + VD G 
Sbjct: 227 GKTAAYLLSDLSSGVTGENIHVDSGF 252

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 102/266 (38%), Gaps = 31/266 (11%)
Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGF 68
           L+ K  +I G      I F ++    + GA +    R+++        L  L   +A  +
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 89
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL-------SPNGFRTVMDI 121
           + DV+  E      E   +  G +D + ++ A     + EDL       S  GF    DI
Sbjct: 90  QIDVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDI 146
Query: 122 DSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLH----YTASWYQIHXXXXXXXX 177
            S     + HEA K + +              +I AT +    +    Y +         
Sbjct: 147 SSYSLTIVAHEAKKLMPEGG------------SIVATTYLGGEFAVQNYNVMGVAKASLE 194
Query: 178 XXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI 237
             + + LAL+ G D +IRVN I+ GPI           + I  +  +  PL +  ++ ++
Sbjct: 195 ANV-KYLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEV 252
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGL 263
              A YL SD    V G  + VD G 
Sbjct: 253 GKTAAYLLSDLSSGVTGENIHVDSGF 278

>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed With Nad+ And Thienodiazaborine Length = 296

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
           TR LA E G   +IRVN I+ GP+G          D +   + +  P+ K     ++  A
Sbjct: 202 TRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNA 261
Query: 241 ALYLTSDTGKYVNGTTLIVDGGL 263
           A +L S     + G T+ VD GL
Sbjct: 262 AAFLVSPLASAITGATIYVDNGL 284

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 23/259 (8%)
Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           + AL+TGG SG+G   +      G  V ++  R++            G   +  EGDV R
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 50
Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNG---FRTVMDIDSVGTFTMCH 131
           +E  ++ V    E      ++  A  G          P+G   FR V++++ +GTF +  
Sbjct: 51  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 110
Query: 132 EALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGAD 191
            A  +  +            I+N ++   +     Q            +T   A E  A 
Sbjct: 111 LA-AWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAAREL-AG 168
Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYLTSDTGK 250
           + IRV  +APG + DTP +  L P++  +     +P   +LG   + A   L++  +   
Sbjct: 169 WGIRVVTVAPG-LFDTPLLQGL-PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--P 224
Query: 251 YVNGTTLIVDGGLWLSRPR 269
            +NG  + +DG L ++ PR
Sbjct: 225 MLNGEVVRLDGALRMA-PR 242

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+VA++TG   GIG  I+ + G  GA V +  R  + L A    + + G +A     D
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86
Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA 99
           +   +             G+ D+LVN A
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNA 114

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 102/266 (38%), Gaps = 31/266 (11%)
Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGF 68
           L+ K  +I G      I F ++    + GA +    R+++        L  L   +A  +
Sbjct: 4   LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 63
Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL-------SPNGFRTVMDI 121
           + DV+  E      E   +  G +D + ++ A     + EDL       S  GF    DI
Sbjct: 64  QIDVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDI 120
Query: 122 DSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLH----YTASWYQIHXXXXXXXX 177
            S     + HEA K + +              +I AT +    +    Y +         
Sbjct: 121 SSYSLTIVAHEAKKLMPEGG------------SIVATTYLGGEFAVQNYNVMGVAKASLE 168
Query: 178 XXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI 237
             + + LAL+ G D +IRVN I+ GPI           + I  +  +  PL +  ++ ++
Sbjct: 169 ANV-KYLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEV 226
Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGL 263
              A YL SD    V G  + VD G 
Sbjct: 227 GKTAAYLLSDLSSGVTGENIHVDSGF 252

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 28/207 (13%)
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL-------SPNGFRTVMD 120
           ++ DV+  E      E   +  G +D + ++ A     + EDL       S  GF    D
Sbjct: 67  YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQD 123
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLH----YTASWYQIHXXXXXXX 176
           I S     + HEA K + +              +I AT +    +    Y +        
Sbjct: 124 ISSYSLTIVAHEAKKLMPEGG------------SIVATTYLGGEFAVQNYNVMGVAKASL 171
Query: 177 XXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD 236
              + + LAL+ G D +IRVN I+ GPI           + I  +  +  PL +  ++ +
Sbjct: 172 EANV-KYLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVE 229
Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +   A YL SD    V G  + VD G 
Sbjct: 230 VGKTAAYLLSDLSSGVTGENIHVDSGF 256

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 28/207 (13%)
Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDL-------SPNGFRTVMD 120
           ++ DV+  E      E   +  G +D + ++ A     + EDL       S  GF    D
Sbjct: 84  YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQD 140
Query: 121 IDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLH----YTASWYQIHXXXXXXX 176
           I S     + HEA K + +              +I AT +    +    Y +        
Sbjct: 141 ISSYSLTIVAHEAKKLMPEGG------------SIVATTYLGGEFAVQNYNVMGVAKASL 188
Query: 177 XXXITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD 236
              + + LAL+ G D +IRVN I+ GPI           + I  +  +  PL +  ++ +
Sbjct: 189 EANV-KYLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVE 246
Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +   A YL SD    V G  + VD G 
Sbjct: 247 VGKTAAYLLSDLSSGVTGENIHVDSGF 273

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	299
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-114
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-113
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-111
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	9e-90
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-73
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-73
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	5e-72
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	9e-71
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-70
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-70
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-70
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-70
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	7e-70
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-69
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-69
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-69
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-68
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-68
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-68
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-67
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-67
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-67
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-67
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-67
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	7e-67
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-66
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-66
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-66
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-66
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-66
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	7e-66
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-65
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-65
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-65
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-65
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-65
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-65
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	8e-65
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	9e-65
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	9e-65
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-64
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-64
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-64
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-64
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-64
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-64
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	5e-64
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	5e-64
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	8e-64
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-63
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-63
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-63
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-63
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-63
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-63
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	6e-63
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	9e-63
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	9e-63
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-62
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-62
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-61
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-61
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-61
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-61
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-61
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-60
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-60
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-60
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-60
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	7e-60
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	7e-60
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	9e-60
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-59
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-59
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	3e-59
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-59
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	6e-59
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-58
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-58
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-58
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-58
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	8e-58
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-57
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-57
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-57
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-57
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	6e-57
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	7e-57
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-56
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-56
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-56
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	2e-56
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-56
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-56
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-56
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	7e-56
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	8e-56
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-55
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-55
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-55
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-55
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-55
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-55
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	5e-55
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	6e-55
3rih_A	293	Short chain dehydrogenase or reductase; structural	7e-55
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-54
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-54
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-54
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-54
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-54
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	5e-54
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	7e-54
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-53
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-53
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-53
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-53
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-52
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-52
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	5e-52
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	6e-52
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	8e-52
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-51
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-51
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-51
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-51
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-51
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-51
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-51
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	7e-51
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-51
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-51
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-50
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	3e-50
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-49
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-49
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	5e-49
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-48
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-47
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-47
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-47
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	9e-47
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-46
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-46
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	5e-46
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-45
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-45
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-45
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-45
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-45
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-44
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-44
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	4e-44
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	6e-44
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	8e-42
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-41
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	6e-40
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-39
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	7e-39
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-38
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-38
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-38
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-37
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	1e-37
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	4e-37
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-35
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-35
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-29
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-35
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	9e-35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-33
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-33
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-31
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-30
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-29
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-29
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-29
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-28
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-27
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-27
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	4e-27
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	1e-26
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-26
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-26
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-26
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-26
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-26
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-26
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	3e-26
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	3e-26
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	3e-26
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	4e-26
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	8e-26
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	3e-25
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	6e-25
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-23
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-23
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-21
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	4e-21
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-18
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-11
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	4e-08
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	1e-07
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	2e-07

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  331 bits (852), Expect = e-114
 Identities = 90/291 (30%), Positives = 141/291 (48%), Gaps = 15/291 (5%)

Query: 4   ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LG 62
           ++    +  +GKVA ITGGG+G+G  ++T     GA   I  R+  VL A    + S  G
Sbjct: 16  KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 75

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
            K    + DVR  +  +  V    +  G  +I++N AAGNF+   E LSPN ++T+ DI 
Sbjct: 76  NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV 135

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
             GT  +  E  K L K         G + L+I+     T S + +  A+AKA V+A+++
Sbjct: 136 LNGTAFVTLEIGKQLIKAQ------KGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSK 189

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAA 241
           +LA EWG  Y +R N I PGPI      ++L P      +    +P  +LG   ++A  A
Sbjct: 190 SLAAEWGK-YGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLA 248

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWL------SRPRHLPKDAVKQLSRTVEKR 286
            +L SD   ++NG  +  DGG  +      +  R + K+    +   + K 
Sbjct: 249 AFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIRKT 299

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  328 bits (842), Expect = e-113
 Identities = 113/269 (42%), Positives = 149/269 (55%), Gaps = 10/269 (3%)

Query: 2   SLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-S 60
           +    F  D+L+ KVA ITGGGSGIGF I+  F +HG    I  R    +  A   L  +
Sbjct: 15  AYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA 74

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
            G + +    DVR        V+   + FG++DIL+N AAGNFL  A  LS N F+TVMD
Sbjct: 75  TGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMD 134

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAI 180
           ID+ GTF +     +   +         GG I+NI+ATL       Q+H  +AKAAVDA+
Sbjct: 135 IDTSGTFNVSRVLYEKFFR-------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAM 187

Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAM 239
           TR+LA+EWG   +IRVN +APGPI  T G+ +L   +   S      PL +LG K +IA 
Sbjct: 188 TRHLAVEWGP-QNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAH 246

Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWLSRP 268
           + LYL S    YV G  L+ DGG WL+ P
Sbjct: 247 SVLYLASPLASYVTGAVLVADGGAWLTFP 275

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  321 bits (825), Expect = e-111
 Identities = 110/261 (42%), Positives = 154/261 (59%), Gaps = 7/261 (2%)

Query: 9   ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF 68
           ++ +K KV +ITGG SG+G  ++T+F K GA V I GR K+ L+ A   +     + +  
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           + DVR  +  +K++E   E FG++DIL+N AAGNF+  AEDLS NG+ +V++I   GTF 
Sbjct: 61  QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFY 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
                 KY  + G        G+I+N+ AT  + A    IH AAAKA V A+T+ LA+EW
Sbjct: 121 CSQAIGKYWIEKGI------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEW 174

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDE-INSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           G  Y IRVN IAPGPI  T G +KL   E +  +    +PL +LG   +IA  A YL SD
Sbjct: 175 GRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSD 234

Query: 248 TGKYVNGTTLIVDGGLWLSRP 268
              Y+NGT + +DGG  L + 
Sbjct: 235 EAAYINGTCMTMDGGQHLHQY 255

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  268 bits (687), Expect = 9e-90
 Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 16/275 (5%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR- 59
               S     +L+G+VA++TGG +GIG  I  +  + G++V I  R+ + L +A   L+ 
Sbjct: 5   AKGRSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQA 64

Query: 60  ----SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGF 115
               +   + +  + ++R +E    +V+ST + FGK++ LVN   G FL  AE +S  G+
Sbjct: 65  NLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGW 124

Query: 116 RTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA 175
             V++ +  GTF MC        K         GGSI+NI            +H  AA+A
Sbjct: 125 HAVLETNLTGTFYMCKAVYSSWMK-------EHGGSIVNIIVP-TKAGFPLAVHSGAARA 176

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP--DEINSKARDYMPLYKLGE 233
            V  +T++LALEW A   IR+N +APG I     +             +   +P  ++G 
Sbjct: 177 GVYNLTKSLALEW-ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGV 235

Query: 234 KWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRP 268
             +++    +L S    ++ G ++ VDGG  L   
Sbjct: 236 PEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH 270

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  225 bits (577), Expect = 2e-73
 Identities = 53/265 (20%), Positives = 114/265 (43%), Gaps = 19/265 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  KV +I+G G  +G  ++ +  + GA + +  R  + L+     +   G +A+    D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +        +V+ T + +G++D+++ NA     +    + +    R  +++   G   + 
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLI 128

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
                 L+           G+++N+++ +   +         AK+A+ A+++ LA E   
Sbjct: 129 QGFTPALE--------ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATEL-G 179

Query: 191 DYDIRVNGIAPGPI---------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           +  IRVN + PG I             G    + ++I + A     L +L  + ++A A 
Sbjct: 180 EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAI 239

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLS 266
           L++ SD    + G  L V+ G + +
Sbjct: 240 LFMASDLASGITGQALDVNCGEYKA 264

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  223 bits (572), Expect = 6e-73
 Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 13/263 (4%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           M      +   L GK A+ITG G+GIG EI+  F   GASV +        +  V  ++ 
Sbjct: 1   MFNSDNLR---LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ 57

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
           LG +A     D+  ++    + +      GK+DILVN A G       D+    FR   +
Sbjct: 58  LGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMPMADFRRAYE 116

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAI 180
           ++    F +       ++K        GGG IL I++      +      A++KAA   +
Sbjct: 117 LNVFSFFHLSQLVAPEMEK-------NGGGVILTITSMAAENKNINMTSYASSKAAASHL 169

Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
            RN+A + G   +IRVNGIAPG I  T  +  +   EI  K   + P+ +LG+  DIA A
Sbjct: 170 VRNMAFDLGE-KNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANA 227

Query: 241 ALYLTSDTGKYVNGTTLIVDGGL 263
           AL+L S    +V+G  L V GG 
Sbjct: 228 ALFLCSPAASWVSGQILTVSGGG 250

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  221 bits (567), Expect = 5e-72
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 14/259 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KVAL+T    GIG  I+ +  + GA V +  R+++ +D  V+ L+  G+   G    
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V + E  +++V       G +DILV NAA   F  +  D +   +  ++ ++   T  M 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
              +  ++K        GGGS+L +S+   Y           +K A+  +T+NLA+E  A
Sbjct: 132 KAVVPEMEK-------RGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVEL-A 183

Query: 191 DYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
             +IRVN +APG I  T   ++            ++ + + +LG   D A    +L S+ 
Sbjct: 184 PRNIRVNCLAPGLI-KTN-FSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 241

Query: 249 GKYVNGTTLIVDGGLWLSR 267
             Y+ G T++V GG   SR
Sbjct: 242 ASYITGETVVVGGG-TASR 259

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  218 bits (559), Expect = 9e-71
 Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 20/258 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  K+A+ITG  SGIG   + +F   GA V I GRRK VLDAA+     +G  AVG + D
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI---AEIGGGAVGIQAD 83

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
                   ++ E      G++D+L   A G  ++   +++   +    D +  G      
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           +AL  L         A G S++   +T   T +      AA+KAA+ +  RN  L+   D
Sbjct: 144 KALPLL---------ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDL-KD 193

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYM----PLYKLGEKWDIAMAALYLT 245
             IR+N ++PGP  +T G+ +LA           + +    P+ ++G   ++A AAL+L 
Sbjct: 194 RGIRINTLSPGPT-ETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLA 252

Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD   +V G  L VDGG 
Sbjct: 253 SDDSSFVTGAELFVDGGS 270

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  217 bits (556), Expect = 3e-70
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 15/258 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKG  AL+TGG  GIG+ I  +    GA V    R ++ LD  +   R  G+   G   D
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78

Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  +    K++++    F GKL+ILVN A       A+D +   +  +M  +    + + 
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 138

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A   LK        +  G+++ +S+   ++A       +A+K A++ +T++LA EW A
Sbjct: 139 QIAYPLLKA-------SQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEW-A 190

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYM----PLYKLGEKWDIAMAALYLT 245
             +IRVN +APG I  TP +        + K   D      P+ + G+  +++    +L 
Sbjct: 191 KDNIRVNSVAPGVI-LTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 249

Query: 246 SDTGKYVNGTTLIVDGGL 263
                Y+ G  +  DGG 
Sbjct: 250 FPAASYITGQIIWADGGF 267

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  218 bits (557), Expect = 3e-70
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 14/261 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGF 68
            + +  L+TGGGSGIG  ++      GASV I+GR    L  AV  L +LG         
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTF 127
             D+  ++   + V++     G+L  +V+ A G+  +     +    +R  +D++  GT 
Sbjct: 69  PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTM 128

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +   A + + +        GGGS + IS+        +       K+AVD + +  A E
Sbjct: 129 YVLKHAAREMVR-------GGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADE 181

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTS 246
            GA   +RVN I PG I  T  +  +    E++S      PL + GE  D+A  A++L S
Sbjct: 182 LGA-SWVRVNSIRPGLI-RTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLS 239

Query: 247 DTGKYVNGTTLIVDGGLWLSR 267
           D   +V G  + VDGG  L R
Sbjct: 240 DAASFVTGQVINVDGGQMLRR 260

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  216 bits (554), Expect = 4e-70
 Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 14/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+G  AL+TGG  GIG+ I  +    GASV    R ++ L+  ++  RS G K      D
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66

Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  +   ++++ +   HF GKL+ILVN A       A+D +   +  +M I+    + + 
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 126

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A  +LK        +  G+++ IS+     A  Y+    A K A+D +TR LA EW A
Sbjct: 127 VLAHPFLKA-------SERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEW-A 178

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTS 246
             +IRVNG+ PG I  T  +     D    +  + +     L ++GE  ++A    +L  
Sbjct: 179 KDNIRVNGVGPGVI-ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF 237

Query: 247 DTGKYVNGTTLIVDGGL 263
               YV G  + VDGGL
Sbjct: 238 PAASYVTGQIIYVDGGL 254

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  216 bits (553), Expect = 5e-70
 Identities = 94/267 (35%), Positives = 139/267 (52%), Gaps = 21/267 (7%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           MS ESPF    L   VA++TG  +GIG  I+  F K GASV +   + +  +A  +A+R 
Sbjct: 2   MSYESPFH---LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ 58

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGN----FLVSAEDLSPNGFR 116
            G KA+G E +V  ++H + V+++  + FGK+ +LVN A G     F +   D     F 
Sbjct: 59  AGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSD-----FE 113

Query: 117 TVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAA 176
               ++    F +   A  +++K       AGGG+ILNIS+      +       ++KAA
Sbjct: 114 WAFKLNLFSLFRLSQLAAPHMQK-------AGGGAILNISSMAGENTNVRMASYGSSKAA 166

Query: 177 VDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD 236
           V+ +TRN+A + G    IRVN IAPG I  T  +  +   EI      + PL +LGE  D
Sbjct: 167 VNHLTRNIAFDVGP-MGIRVNAIAPGAI-KTDALATVLTPEIERAMLKHTPLGRLGEAQD 224

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGL 263
           IA AAL+L S    +++G  L V GG 
Sbjct: 225 IANAALFLCSPAAAWISGQVLTVSGGG 251

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  215 bits (551), Expect = 7e-70
 Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA+ITGG  GIG  I+T+F + GA V I GR   V + A  ++ +   +   F+ D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
              ++   K+ ++T + FG +  LVN A      S E+ +   +R ++ ++  G F    
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG-A 190
             ++ +K  G       G SI+N+S+   +          A+K AV  ++++ AL+    
Sbjct: 123 LGIQRMKNKG------LGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK 176

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           DYD+RVN + PG I  TP ++ L   E     R   P+  +GE  DIA   +YL S+  K
Sbjct: 177 DYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235

Query: 251 YVNGTTLIVDGGL 263
           +  G+  +VDGG 
Sbjct: 236 FATGSEFVVDGGY 248

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  215 bits (550), Expect = 1e-69
 Identities = 72/257 (28%), Positives = 109/257 (42%), Gaps = 15/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  +VA++TGG   IG    T   + GA V I    + +   AV  LR  G        D
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V   E  +  V S  E  G++DILV  A      V AED++   +   +DI+  G F  C
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC 130

Query: 131 HEALKYLKKGGPGRSSAGGGSILNIS--ATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
               + + +          G I+ I   + L       Q    A+KA V    R+LA EW
Sbjct: 131 QAVGRIMLE-------QKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEW 183

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPD--EINSKARDYMPLYKLGEKWDIAMAALYLTS 246
            A + IR N +AP  I +T  + +   +  E+        P+ ++G+  ++A    +L S
Sbjct: 184 -APHGIRANAVAPTYI-ETT-LTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLAS 240

Query: 247 DTGKYVNGTTLIVDGGL 263
           D    + G  + VD G 
Sbjct: 241 DAASLMTGAIVNVDAGF 257

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  215 bits (551), Expect = 2e-69
 Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 15/255 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGKVA +TG   GIG+ ++  + + GA VAI        + A    ++ G+ +  ++ +
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA--AGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           +   +  ++ +    + FG +D+ V  A          +  + + +  ++ +D  G +  
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNIS--ATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            H   K  KK        G GS++  S  +         Q     AKAA   + ++LA+E
Sbjct: 152 SHNIGKIFKK-------NGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIE 204

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
           W A +  RVN I+PG I DT  +   A  ++ +K     PL + G   ++    LYL S+
Sbjct: 205 W-APF-ARVNTISPGYI-DTD-ITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASN 260

Query: 248 TGKYVNGTTLIVDGG 262
              +  G+ +++DGG
Sbjct: 261 ASTFTTGSDVVIDGG 275

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  215 bits (550), Expect = 2e-69
 Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 16/263 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK+A++TG  SGIG   +  F + GA V +  R    L      +   G +A    GD
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V  +   + +VE     FG LD    NA A   +     LS  G+R  +D +    F   
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNLALEWG 189
              +  +          GGGS+   S+ + +TA +  +   AA+KA +  + + LA+E G
Sbjct: 126 KYQVPAIAA-------LGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELG 178

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLT 245
           A   IRVN + PG   DTP  N         + R ++     L ++    +IA AALYL 
Sbjct: 179 AR-GIRVNALLPGGT-DTP-ANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA 235

Query: 246 SDTGKYVNGTTLIVDGGLWLSRP 268
           SD   +V G  L+ DGG  +++ 
Sbjct: 236 SDGASFVTGAALLADGGASVTKA 258

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  213 bits (545), Expect = 1e-68
 Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 10/253 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K  L+TGG  GIG  I  +F   GA +    R +  L+  +S  +  G +  G   D
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71

Query: 72  VRRQEHAKKVVESTFEHFG-KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
              +   +K++++    FG KLDIL+N           D +   F   +  +    + + 
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 131

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A   LK        +G G+I+ +S+     ++      +A K A++ + RNLA EW +
Sbjct: 132 QLAHPLLKA-------SGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWAS 184

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           D  IR N +AP  I  TP    +  DE         PL + GE  +++    +L      
Sbjct: 185 D-GIRANAVAPAVI-ATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS 242

Query: 251 YVNGTTLIVDGGL 263
           Y+ G T+ VDGGL
Sbjct: 243 YITGQTICVDGGL 255

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  212 bits (543), Expect = 2e-68
 Identities = 68/268 (25%), Positives = 109/268 (40%), Gaps = 14/268 (5%)

Query: 1   MSLESPFKADI--LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL 58
           M+      A +  L GK ALITG   GIG +I+  F   GA + + GR    LDAA  AL
Sbjct: 5   MTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL 64

Query: 59  R-SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRT 117
               G        D+   +   ++     E FG LD+LVN A  +      D  P  F  
Sbjct: 65  GEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDA 124

Query: 118 VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAV 177
            + ++      +     K +   G       GG+I+ +++               +KA +
Sbjct: 125 TIAVNLRAPALLASAVGKAMVAAG------EGGAIITVASAAALAPLPDHYAYCTSKAGL 178

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKW 235
              T+ LA E    + IR N + P  +  T  M +     +  ++     +PL +     
Sbjct: 179 VMATKVLAREL-GPHGIRANSVCPTVV-LTE-MGQRVWGDEAKSAPMIARIPLGRFAVPH 235

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +++ A ++L SD    +NG  + VDGG 
Sbjct: 236 EVSDAVVWLASDAASMINGVDIPVDGGY 263

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  212 bits (541), Expect = 6e-68
 Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           MS+   F    L GK ALITG  +GIG +++  + + GA VA+  R    L      +  
Sbjct: 22  MSVLDLFD---LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG 78

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
           +G KA+    DV + +  + +++      G +DI V  A    + +  D+    F+ + D
Sbjct: 79  VGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA--AAKAAVD 178
            +  G F     A + +   G       GG+I+  ++   +  +  Q       +KAAV 
Sbjct: 139 TNVTGVFLTAQAAARAMVDQG------LGGTIITTASMSGHIINIPQQVSHYCTSKAAVV 192

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
            +T+ +A+E  A + IRVN ++PG I  T  + +    + ++     +PL ++G   ++ 
Sbjct: 193 HLTKAMAVEL-APHQIRVNSVSPGYI-RTE-LVEPLA-DYHALWEPKIPLGRMGRPEELT 248

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
              LYL S    Y+ G+ +++DGG
Sbjct: 249 GLYLYLASAASSYMTGSDIVIDGG 272

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  210 bits (538), Expect = 2e-67
 Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 29/286 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGF 68
              K  +ITG  +GIG   +  F + GA+V I GR  + L+     +   G+   +    
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSV 124
             DV  ++   +++ ST + FGK+D+LVN A       F  +  D   + +   + ++  
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-YTASWYQIHVAAAKAAVDAITRN 183
               M  +   +L            G I+N+S+ +    A    ++ A AKAA+D  TR+
Sbjct: 124 AVIEMTKKVKPHLVA--------SKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRS 175

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYM-------PLYKLGEKW 235
            A++  A + IRVN ++PG + +T   N +  PD+ + K  ++M       P+   G+  
Sbjct: 176 TAIDL-AKFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE 233

Query: 236 DIAMAALYLTSD-TGKYVNGTTLIVDGGLWLS--RPRHLPKDAVKQ 278
            IA   L+L       Y+ G +++ DGG  L      H     +  
Sbjct: 234 HIANIILFLADRNLSFYILGQSIVADGGTSLVMGTQAHDVMSIMSS 279

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  210 bits (536), Expect = 2e-67
 Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 20/257 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +GK A++ GG  G+G     +  + GA V + GR +  +          G +      D
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +        +  +  +  G +D+L   A  + L   + +S   +     +++ G F    
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
                +++         GGSI+  S+             +A+KAA+ +    LA E    
Sbjct: 123 RLTPLIRE---------GGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAEL-LP 172

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYM----PLYKLGEKWDIAMAALYLTS 246
             IRVN ++PG I DTP        +   ++ +       P+ + G   ++A A L+L  
Sbjct: 173 RGIRVNSVSPGFI-DTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF 231

Query: 247 DTGKYVNGTTLIVDGGL 263
           +   +  G  L VDGGL
Sbjct: 232 EAT-FTTGAKLAVDGGL 247

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  209 bits (535), Expect = 3e-67
 Identities = 71/257 (27%), Positives = 111/257 (43%), Gaps = 12/257 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK AL+TG   G+GF  +      GA V +   R  +L  +V  L   G  A G   D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +   +            +DIL+N A   +     +L    ++ V+D +    F +  
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSR 126

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A K +           GG I+NI +     A        AAK  +  +T ++A EW A 
Sbjct: 127 SAAKRMIARN------SGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEW-AQ 179

Query: 192 YDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           ++I+ N I PG I  T  MN   +   + +S  +   P  + G   ++   A++L+S   
Sbjct: 180 FNIQTNAIGPGYI-LTD-MNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKAS 237

Query: 250 KYVNGTTLIVDGGLWLS 266
            Y+NG  + VDGG WL+
Sbjct: 238 DYINGQIIYVDGG-WLA 253

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  210 bits (537), Expect = 3e-67
 Identities = 75/267 (28%), Positives = 114/267 (42%), Gaps = 20/267 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
               VALITG GSGIG   +      G +V  +GR +  ++     +   G +A+  E D
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD 85

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V  +   +  V      FG LDI+V NA         +DL P  +   + ++  GTF   
Sbjct: 86  VSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTL 145

Query: 131 HEALKYLKKGGPGRSSAGGGSILNIS--ATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           H  + YLK+        GGG+I+ +S         +       A KAA  AI + LALE 
Sbjct: 146 HLTVPYLKQ-------RGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALEL 198

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDE--------INSKARDYMPLYKLGEKWDIAMA 240
              + IRVN + PG I +T   +                 K +  +   + G   D+A  
Sbjct: 199 -GKHHIRVNAVCPGAI-ETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAEL 256

Query: 241 ALYLTSDTGKYVNGTTLIVDGGLWLSR 267
             +L S+  ++V G+ + +DGG  L R
Sbjct: 257 IRFLVSERARHVTGSPVWIDGGQGLLR 283

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  209 bits (534), Expect = 5e-67
 Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 14/254 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KVA+ITG   GIG E S    + GA V +    +        A  S+G  AV    D
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPE---TDLAGAAASVGRGAVHHVVD 65

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA--AGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           +  +   + +++ T + FG+LDI+ N A  +    +    ++ + +     +++ GT  M
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
           C  A+  L         AGGG+I+NIS+   + A       A  KAA++ +TR +A ++G
Sbjct: 126 CKYAIPRLIS-------AGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYG 178

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
               +R N IAPG +  TP +    P  I      +    ++GE  +IA    +L SD  
Sbjct: 179 RH-GVRCNAIAPGLV-RTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRA 236

Query: 250 KYVNGTTLIVDGGL 263
            ++ G  +  D GL
Sbjct: 237 AFITGQVIAADSGL 250

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  208 bits (532), Expect = 7e-67
 Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 15/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK KV ++TG GSGIG  I+ +F  + + V  +   +  L+  V  LR +G + +G + D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V +++  ++ V  TFE + ++D+L  NA   + +    ++S   +  V+ ++    F   
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
              +  + K        G G I+N ++       +       AK  +  +TR++A  +  
Sbjct: 125 RAVIPIMLK-------QGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHY-G 176

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTS 246
           D  IR   + PG +  T  +   +        R          +L E  DIA   ++L S
Sbjct: 177 DQGIRAVAVLPGTV-KTN-IGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLAS 234

Query: 247 DTGKYVNGTTLIVDGGL 263
           D   +VNG  ++VDGGL
Sbjct: 235 DEASFVNGDAVVVDGGL 251

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  208 bits (531), Expect = 2e-66
 Identities = 77/276 (27%), Positives = 119/276 (43%), Gaps = 27/276 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGF 68
              KVA+ITG  +GIG   +  F + GA V I GR  + L+     + + G+        
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAE----DLSPNGFRTVMDIDSV 124
             DV       +++ +T   FGKLDILVN A      S        S   +   ++++  
Sbjct: 64  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-YTASWYQIHVAAAKAAVDAITRN 183
               +  +A+ +L            G I+NIS+      A+    + + AKAA+D  TRN
Sbjct: 124 SVIALTKKAVPHLSS--------TKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRN 175

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYM-------PLYKLGEKW 235
            A++    + IRVN I+PG +  T   + +  P+E + K    M       P   +G+  
Sbjct: 176 TAIDL-IQHGIRVNSISPGLV-ATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ 233

Query: 236 DIAMAALYLTSDTG-KYVNGTTLIVDGGLWLSRPRH 270
           DIA    +L       Y+ G  L+VDGG  L    H
Sbjct: 234 DIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLH 269

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  207 bits (529), Expect = 2e-66
 Identities = 83/266 (31%), Positives = 114/266 (42%), Gaps = 20/266 (7%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
           M   + F+   L G  A +TG GSGIG EI   F   GA + ++ R    LD A   L  
Sbjct: 1   MDYRTVFR---LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG- 56

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
               A     DV   E          E    + ILVN+A    L  A +     +R VM 
Sbjct: 57  -AAVAARIVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMA 114

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA--AAKAAVD 178
           ++  G F       + +          G G+I+N+ +      +  Q   +  A+K AV 
Sbjct: 115 VNVDGMFWASRAFGRAMVA-------RGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVH 167

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD--EINSKARDYMPLYKLGEKWD 236
            +TR LA EW A   +RVN +APG +  T  M     +  E+     D  P+ + GE  +
Sbjct: 168 QLTRALAAEW-AGRGVRVNALAPGYV-ATE-MTLKMRERPELFETWLDMTPMGRCGEPSE 224

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGG 262
           IA AAL+L S    YV G  L VDGG
Sbjct: 225 IAAAALFLASPAASYVTGAILAVDGG 250

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  207 bits (529), Expect = 2e-66
 Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 13/256 (5%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFE 69
           + + K AL+TG   G+G   + +  ++G ++ I   R K+        +  LG+K +  +
Sbjct: 1   MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            +V +    K++ +   E FG+LD+ VN AA   L    +L    +   M+I++      
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
             EA K ++K        GGG I++IS+            V  +KAA++A+TR LA+E  
Sbjct: 121 AQEAAKLMEK-------NGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELS 173

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAP--DEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
               I VN ++ G I DT    K  P  +++   AR   P  ++ E  D+     +L S 
Sbjct: 174 P-KQIIVNAVSGGAI-DTD-ALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSS 230

Query: 248 TGKYVNGTTLIVDGGL 263
               + G T+IVDGG 
Sbjct: 231 KADMIRGQTIIVDGGR 246

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  207 bits (529), Expect = 4e-66
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 17/257 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  +V ++TGGGSGIG   +  F K+GA V +    +   DAAV     +G KA G   D
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE---DAAVRVANEIGSKAFGVRVD 81

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   + A+ +VE T   +G++D+LVN A      +   +    +  +M ++  G F    
Sbjct: 82  VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK 141

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +  +++        GGGSI+N ++    +A   +    A+K A+ ++TR +A++  A 
Sbjct: 142 YVIPVMRR-------NGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDH-AK 193

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
             IRVN +APG I D+P   K+      P ++ S       + ++G   +IA A L+L S
Sbjct: 194 EGIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLAS 252

Query: 247 DTGKYVNGTTLIVDGGL 263
           D  ++  G+ L VDGG 
Sbjct: 253 DRSRFATGSILTVDGGS 269

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  206 bits (527), Expect = 5e-66
 Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 24/266 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
           L   VA++TGG SGIG        + GA+VA   R  + L AA SALR    G +     
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV      +   E+     G   ILVN A    + +  + +   +   + +        
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP 125

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               L  L+            +I+ +++ L      + +  +AA+A V  + R++A E+ 
Sbjct: 126 VRAFLPQLES-------RADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA 178

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM------------PLYKLGEKWDI 237
               +RVNGI  G + ++    +   +    +  D+             PL +LG+  + 
Sbjct: 179 PK-GVRVNGILIGLV-ESG-QWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEA 235

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGL 263
           A A L+L S    Y  G+ + V GGL
Sbjct: 236 ARAILFLASPLSAYTTGSHIDVSGGL 261

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  205 bits (525), Expect = 7e-66
 Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 17/257 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TGG SG+G E+       GA VA     +            LG +++    D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA---AELGERSMFVRHD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +     V+ +     G L++LVN A        E      F  ++ I++   F  C 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           + +  +K+         GGSI+N+++   +         +A+KAAV A+TR  AL     
Sbjct: 121 QGIAAMKE--------TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQ 172

Query: 192 -YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTS 246
            Y IRVN I P  I  TP M    P  ++ +   +        +      IA   L+L S
Sbjct: 173 GYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS 231

Query: 247 DTGKYVNGTTLIVDGGL 263
           D    ++G+ L  D  +
Sbjct: 232 DESSVMSGSELHADNSI 248

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  206 bits (527), Expect = 1e-65
 Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 27/284 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA---VGF 68
             GK  +ITG  +GIG   +  F K GA V I GR +  L+     +   G+ A      
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGT 126
             DV        ++ +T   FGK+DILVN A  N     +  D     ++    ++    
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNI-SATLHYTASWYQIHVAAAKAAVDAITRNLA 185
             M  +  ++L K          G I+N+ S      A     + A AKAA+D  TR  A
Sbjct: 144 IEMTQKTKEHLIK--------TKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTA 195

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYM-------PLYKLGEKWDI 237
           ++    + +RVN ++PG +  T  M  +  P+  + K   ++       P+   G+  +I
Sbjct: 196 IDL-IQHGVRVNSVSPGAV-ATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI 253

Query: 238 AMAALYLTS-DTGKYVNGTTLIVDGGLWLSR--PRHLPKDAVKQ 278
           A   ++L   +   Y+ G +++ DGG  L      H     + Q
Sbjct: 254 ANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVLSQ 297

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  205 bits (523), Expect = 2e-65
 Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 15/262 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
              +  ++ G G  IG   + +F + GA+V +      +    AV+ +  LG  A+  + 
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVN-AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           D+      +  + +  + FG++  LV+ A       +  ++    +  V+D++    F  
Sbjct: 66  DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHVAAAKAAVDAITRNLALEW 188
              AL  + K         GG+I+  S+           +  A +K AV   TR LA E 
Sbjct: 126 AKTALPKMAK---------GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEV 176

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           G    IRVN + PG I  T   +     E+  +      L + G   D+A    +L SD 
Sbjct: 177 GP--KIRVNAVCPGMI-STTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDD 233

Query: 249 GKYVNGTTLIVDGGLWLSRPRH 270
             YV G    ++GG+  S   H
Sbjct: 234 AAYVTGACYDINGGVLFSEGHH 255

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  204 bits (522), Expect = 2e-65
 Identities = 81/256 (31%), Positives = 124/256 (48%), Gaps = 12/256 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVALITG GSG G  ++ +F K GA V I+ R K   +        +G  A+    D
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE---IGDAALAVAAD 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           + ++      VE+    FGK+DILV NA  G+   +AE + P  F  ++ ++  G + M 
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            + + + K+ G          ILN+++T             A K  V ++T+ LA+E  A
Sbjct: 124 SKLIPHFKENGAK---GQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIEL-A 179

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA---PDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
              IRV  + P    +TP +        +EI  K RD +P+ +L +  D+A AA +L S 
Sbjct: 180 PAKIRVVALNPVAG-ETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP 238

Query: 248 TGKYVNGTTLIVDGGL 263
               + G  L VDGG 
Sbjct: 239 QASMITGVALDVDGGR 254

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  204 bits (522), Expect = 3e-65
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 21/264 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           + GKVA+ITG  SGIG  I+  F K GA + ++ R+   L  A  +L+   G++ +    
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   E    VVES    FG  DILVN A      +  + +   ++   ++  +    + 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
              +  ++         GGG+I++ ++       WY+      KAA+   ++ LA E   
Sbjct: 125 RGLVPGMRA-------RGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEV-I 176

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPD-----------EINSKARDYMPLYKLGEKWDIAM 239
             +IRVN I PG I  TP   K A +            + S A ++ P+ +     ++A 
Sbjct: 177 KDNIRVNCINPGLI-LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELAN 235

Query: 240 AALYLTSDTGKYVNGTTLIVDGGL 263
             ++L S+   Y  G+   VDGG+
Sbjct: 236 FFVFLCSERATYSVGSAYFVDGGM 259

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  203 bits (520), Expect = 3e-65
 Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 20/256 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+  L+TG G GIG          GA V  + R +  LD+ V               D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   E      E      G +D+LVN AA   L    +++   F    +++      +  
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              + L   G        G+I+N+S+     A        + K A+D +T+ +ALE G  
Sbjct: 117 IVARGLIARG------VPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGP- 169

Query: 192 YDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           + IRVN + P  +  T  M +   +         + +PL K  E   +  A L+L SD  
Sbjct: 170 HKIRVNAVNPTVV-MTS-MGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227

Query: 250 KYVNGTTLIVDGGLWL 265
               G+TL V+GG + 
Sbjct: 228 GMTTGSTLPVEGG-FW 242

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  203 bits (520), Expect = 6e-65
 Identities = 90/259 (34%), Positives = 133/259 (51%), Gaps = 15/259 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L+G+VAL+TGG  G+GF I+    + G SV +  R  +    A   L    G++ + F  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   E  KK++E+  E FGKLD +VNAA  N    AE+   + FR V++++  GT+ +C
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 138

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNLALEWG 189
            EA   L++       +   SI+NI +      +   I   AA+K  V ++T+ LA EW 
Sbjct: 139 REAFSLLRE-------SDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEW- 190

Query: 190 ADYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             Y IRVN IAPG    T  M +   +  E        +PL + G   D+   A++L S+
Sbjct: 191 GRYGIRVNVIAPGWY-RTK-MTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE 248

Query: 248 TGKYVNGTTLIVDGGLWLS 266
             KYV G  + VDGG W +
Sbjct: 249 EAKYVTGQIIFVDGG-WTA 266

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  203 bits (519), Expect = 8e-65
 Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 19/273 (6%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAI---MGRRKQVLDAAVSA 57
           MSL        LK KV +I GG   +G   +  F     ++ +     +     +     
Sbjct: 1   MSLTKYHD---LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDE 57

Query: 58  LRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRT 117
           L   G K   ++ D+  +E   K+ +   + FGK+DI +N           + S   F  
Sbjct: 58  LEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDA 117

Query: 118 VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAV 177
           +  I++   +    +A K++            G I+ I+ +L    + +    A  KA V
Sbjct: 118 MDTINNKVAYFFIKQAAKHMNP---------NGHIITIATSLLAAYTGFYSTYAGNKAPV 168

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI 237
           +  TR  + E      I VN IAPGP+ DT         E  +  +      +L +  DI
Sbjct: 169 EHYTRAASKELMK-QQISVNAIAPGPM-DTSFFYGQETKESTAFHKSQAMGNQLTKIEDI 226

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRH 270
           A    +LT+D G ++NG T+  +GG   +R  H
Sbjct: 227 APIIKFLTTD-GWWINGQTIFANGGY-TTREGH 257

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  203 bits (519), Expect = 9e-65
 Identities = 80/255 (31%), Positives = 133/255 (52%), Gaps = 12/255 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
           L+GKV +ITG  +G+G  ++ +F    A V +  R  +   ++ +  ++ +G +A+  +G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA+KY  +          G+++N+S+          +H AA+K  +  +T  LALE+ A
Sbjct: 125 REAIKYFVEND------IKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY-A 177

Query: 191 DYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
              IRVN I PG I +TP +N    A  E  +     +P+  +GE  +IA  A +L S  
Sbjct: 178 PKGIRVNNIGPGAI-NTP-INAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235

Query: 249 GKYVNGTTLIVDGGL 263
             YV G TL  DGG+
Sbjct: 236 ASYVTGITLFADGGM 250

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  203 bits (519), Expect = 9e-65
 Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 27/261 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIK 64
           L GK   ITG   GIG  I+ +  + GA+VAI  +           + +A +A+ + G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
            +  + D+R ++  +  V +T + FG +DILVN A+  +L    D     F  +  +++ 
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV--AAAKAAVDAITR 182
           G+F      L +L +       A    IL ++       +W+  H     AK  +  +T 
Sbjct: 124 GSFVCAQACLPHLLQ-------APNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTL 176

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
            LA E+     + +N + P  +  T  +N L            +          +A AA 
Sbjct: 177 GLAAEF-GPQGVAINALWPRTVIATDAINMLPG----------VDAAACRRPEIMADAAH 225

Query: 243 YLTSDTGKYVNGTTLIVDGGL 263
            + +      +G  LI D  L
Sbjct: 226 AVLTREAAGFHGQFLIDDEVL 246

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  203 bits (518), Expect = 1e-64
 Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 25/267 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GKV L+TG G  IG   + +  + G ++A++   ++ L+ A +++R  G++A  +  D
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V  +E     V+S    FGK+D L  NA         +D   + F  V+ I+  G F + 
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 124

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
               + +            G I+N ++               +K A+ A+T   AL+  A
Sbjct: 125 KAVSRQMIT-------QNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDL-A 176

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA---------------PDEINSKARDYMPLYKLGEKW 235
            Y+IRVN I+PG +     M +                 P  +  +    +P+ + G+  
Sbjct: 177 PYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN 235

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGG 262
           +I     +L  D   ++ G  L + GG
Sbjct: 236 EIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  203 bits (518), Expect = 1e-64
 Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 10/255 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G++AL+TGG  GIG  I+    + GA V I  R  +      + L + G        D
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPAD 85

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +  +  A+++ ++  E   +LDILVN A  ++  + E    +G+  VM ++    F+   
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQ 145

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNLALEWGA 190
           + L  L++     S+     ++NI +    +A   Q +    +KAA+  ++R LA E   
Sbjct: 146 QLLPLLRRSA---SAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL-V 201

Query: 191 DYDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
              I VN IAPG    +  M +      +        +P+ + G   ++A  A+ L    
Sbjct: 202 GEHINVNVIAPGRF-PSR-MTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTA 259

Query: 249 GKYVNGTTLIVDGGL 263
           G Y+ G  + +DGG 
Sbjct: 260 GAYMTGNVIPIDGGF 274

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  202 bits (516), Expect = 2e-64
 Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 15/255 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            + KV ++TG G GIG   +    + GA+V +     +  +A    + + G  A+    D
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV---SAEDLSPNGFRTVMDIDSVGTFT 128
           V   E AK + + T   FG +D LVN AA    +       + P  ++  M ++  G   
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
                 K + K        GGG+I+N S+T    A  Y  +   AK  ++ +T+ L+ E 
Sbjct: 127 CTRAVYKKMTK-------RGGGAIVNQSST---AAWLYSNYYGLAKVGINGLTQQLSREL 176

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           G   +IR+N IAPGPI DT       P E+       +PL ++G   D+    L+L SD 
Sbjct: 177 GG-RNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE 234

Query: 249 GKYVNGTTLIVDGGL 263
             ++ G    VDGG 
Sbjct: 235 ASWITGQIFNVDGGQ 249

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  201 bits (515), Expect = 3e-64
 Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 21/265 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GK ALITG   GIG   +  + + GA+VAI       ++ A  A   +G  A   + D
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADID---IERARQAAAEIGPAAYAVQMD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V RQ+     + +T EH G LDILVN AA   L    +++   +  +  I+  GT     
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A + +   G       GG I+N+++              A KAAV ++T++  L+    
Sbjct: 123 AAARQMIAQG------RGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDL-IK 175

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA----------PDEINSKARDYMPLYKLGEKWDIAMAA 241
           + I VN IAPG + D    + +             E      + +P  ++G   D+   A
Sbjct: 176 HRINVNAIAPGVV-DGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMA 234

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLS 266
           ++L S    Y+   T  VDGG W+S
Sbjct: 235 IFLASAESDYIVSQTYNVDGGNWMS 259

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  201 bits (514), Expect = 3e-64
 Identities = 74/257 (28%), Positives = 120/257 (46%), Gaps = 20/257 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GK  L+TGG  GIG  I+  F + GA VA+   R +  + A        I    F+ D
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE------AIGGAFFQVD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +  +    + VE      G++D+LVN AA     SA  +    +R V++++      +  
Sbjct: 58  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 117

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A + ++K        GGG+I+N+++     A        A+K  +  +TR+LAL+  A 
Sbjct: 118 LAAREMRK-------VGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDL-AP 169

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
             IRVN +APG I  T  + +       P+       D   L +LG+  ++A A L+L S
Sbjct: 170 LRIRVNAVAPGAI-ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS 228

Query: 247 DTGKYVNGTTLIVDGGL 263
           +   ++ G  L VDGG+
Sbjct: 229 EKASFITGAILPVDGGM 245

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  201 bits (514), Expect = 4e-64
 Identities = 63/271 (23%), Positives = 107/271 (39%), Gaps = 20/271 (7%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALR 59
           M+            K  ++TGG  GIG   +      GA+VA++ R     ++      +
Sbjct: 4   MAPGFTIS---FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK 60

Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
             G+K   ++ DV   +   K ++      G +  L+  A  + +  A +L+   F  V 
Sbjct: 61  EFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVY 120

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS-------ATLHYTASWYQIHVAA 172
           D++  G F  C    K   +          GSI+  S              S  Q+   +
Sbjct: 121 DVNVFGVFNTCRAVAKLWLQ------KQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNS 174

Query: 173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG 232
           +KAA   + + LA EW A   IRVN ++PG + +T         +I       +PL +  
Sbjct: 175 SKAACSNLVKGLAAEW-ASAGIRVNALSPGYV-NTD-QTAHMDKKIRDHQASNIPLNRFA 231

Query: 233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +  ++   A+ L SD   Y+ G    +DGG 
Sbjct: 232 QPEEMTGQAILLLSDHATYMTGGEYFIDGGQ 262

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  201 bits (514), Expect = 5e-64
 Identities = 83/258 (32%), Positives = 127/258 (49%), Gaps = 21/258 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GKV ++TGGG GIG  I   F   GA V I  + +    A    L      AV    D
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVN-AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V +++  K +V  T   FG+LD +VN A         E+ S  GFR +++++ +GT+T+ 
Sbjct: 63  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             AL YL+K          G+++NIS+ +        +   A K AV A+T+ LAL+  +
Sbjct: 123 KLALPYLRK--------SQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDE-S 173

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            Y +RVN I+PG I  TP   +LA     P     +     PL ++G+  ++  AA++L 
Sbjct: 174 PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA 232

Query: 246 SDTGKYVNGTTLIVDGGL 263
           S+   +  G  L+V GG 
Sbjct: 233 SE-ANFCTGIELLVTGGA 249

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  201 bits (513), Expect = 5e-64
 Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 9/257 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
           LKGK  LITG   GIG   +  F + GA V + GR+    +D  ++++R+ G  A  F  
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           D+   E  +++V+     FG +D+L+ NA          ++    +  VMD +       
Sbjct: 65  DLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMT 124

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHVAAAKAAVDAITRNLALEW 188
              AL +L             ++++  +   +T          AAKA +  + +N     
Sbjct: 125 TKFALPHLAAAAKASGQ--TSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
             D  +R N ++PG + DT   +     ++  +  + +P+ + G   ++A A L+  S  
Sbjct: 183 TKD-GVRFNIVSPGTV-DTA-FHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHL 239

Query: 249 -GKYVNGTTLIVDGGLW 264
              Y+ G  L ++GG +
Sbjct: 240 ASGYITGQVLDINGGQY 256

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  200 bits (511), Expect = 8e-64
 Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 12/253 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K+A+ITGG +GIG  I+ +F   GA +AI          A +A+R+LG + +  + D
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +    +   +     FG+ DILVN A    L+  ++L+   ++   +I+    F M  
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +  +K+        G G I+N+++T ++       H  + KAA    TR LA + G  
Sbjct: 123 AFVPGMKR-------NGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGK- 174

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINS-KARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             I VN IAP  +  T      A   +          + +L    D+  AA +L SD   
Sbjct: 175 DGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDAS 233

Query: 251 YVNGTTLIVDGGL 263
           ++ G TL VDGG+
Sbjct: 234 FITGQTLAVDGGM 246

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  200 bits (511), Expect = 1e-63
 Identities = 80/253 (31%), Positives = 111/253 (43%), Gaps = 14/253 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK  +ITGG  G+G E + Q    GA V +        +   +  R LG  A     D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELGDAARYQHLD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +E  ++VV    E FG +D LVN A  +  +  E  S   FR V++I+  G F    
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +  +K        AGGGSI+NIS+              A+K  V  +++  A+E    
Sbjct: 120 TVIPAMKD-------AGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL-GT 171

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEK-WDIAMAALYLTSDTGK 250
             IRVN + PG    TP M                P+ ++G +  +IA A + L SDT  
Sbjct: 172 DRIRVNSVHPGMT-YTP-MTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSS 229

Query: 251 YVNGTTLIVDGGL 263
           YV G  L VDGG 
Sbjct: 230 YVTGAELAVDGGW 242

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  200 bits (511), Expect = 1e-63
 Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 18/252 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVAL++GG  G+G          GA V          +   +    L   A     D
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD---EEGKAMAAELADAARYVHLD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +    K  V++    FG L +LVN A    + + ED +   ++ ++D++  G F    
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 121

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +K +K+       AG GSI+NIS+      +       A K AV  +T++ ALE    
Sbjct: 122 AVVKPMKE-------AGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL-GP 173

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             IRVN I PG +  TP M    P++I         L +  E  +++   +YL SD   Y
Sbjct: 174 SGIRVNSIHPGLV-KTP-MTDWVPEDIFQ-----TALGRAAEPVEVSNLVVYLASDESSY 226

Query: 252 VNGTTLIVDGGL 263
             G   +VDGG 
Sbjct: 227 STGAEFVVDGGT 238

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  199 bits (509), Expect = 1e-63
 Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 14/255 (5%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEGDV 72
            +VA++TG  SG G  I+T+F   G  VA +    + L+        +   K +    DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
             +      + +T E FG +D+LVN A     +            F  VM ++  G F  
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
           C   L ++          G G I+NI++     A   +     +K AV  +T+++A+++ 
Sbjct: 122 CRAVLPHMLL-------QGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY- 173

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
           A   IR N + PG I +TP         E+  +    +P  ++G    +A A ++L  + 
Sbjct: 174 AGSGIRCNAVCPGMI-ETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED 232

Query: 249 GKYVNGTTLIVDGGL 263
             YVNG  L++DG  
Sbjct: 233 ATYVNGAALVMDGAY 247

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  199 bits (508), Expect = 2e-63
 Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 20/257 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             G  AL+TG G GIG +        GA V  + R    L +                 D
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   +      E      G +D+LVN AA   +    +++   F     ++    F +  
Sbjct: 61  LGDWD----ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 116

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              + +   G        GSI+N+S+ + +      I  ++ K A+  +T+ +A+E    
Sbjct: 117 MVARDMINRG------VPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMEL-GP 169

Query: 192 YDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           + IRVN + P  +  T  M K   A  E   K ++  PL K  E  D+  + L+L SD  
Sbjct: 170 HKIRVNSVNPTVV-LTD-MGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS 227

Query: 250 KYVNGTTLIVDGGLWLS 266
              +G  ++VD G +L+
Sbjct: 228 ASTSGGGILVDAG-YLA 243

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  200 bits (510), Expect = 2e-63
 Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 10/255 (3%)

Query: 10  DILKGKVALITGG-GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVG 67
            +LKGKV L+T   G+GIG   + +    GA V I    ++ L      L  LG+ +   
Sbjct: 18  GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEA 77

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              DV   E    ++  T E  G+LD+LVN A         D++   +  V+++      
Sbjct: 78  VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM 137

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
                AL+Y +          GG I+N ++ L + A   Q H AAAKA V A+TR  A+E
Sbjct: 138 RATRAALRYFRGVD------HGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
              ++ +R+N ++P        + K +  E+  +        +  E W++A    +L SD
Sbjct: 192 A-VEFGVRINAVSPSIA-RHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASD 249

Query: 248 TGKYVNGTTLIVDGG 262
              Y+ G  + V   
Sbjct: 250 YSSYMTGEVVSVSSQ 264

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  200 bits (510), Expect = 2e-63
 Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 18/258 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG G+GIG  ++ +    G  V          DAA +A   +G  A     D
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADID---GDAADAAATKIGCGAAACRVD 83

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++    +V++    FG +D LV  A    L S  D +   F  V+ I+  G +    
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTK 143

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A   + +        GGG+I+N+S+     A         +KA +  ++R  A E    
Sbjct: 144 HAAPRMIE-------RGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAEL-RS 195

Query: 192 YDIRVNGIAPGPIGDTP------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
             IR N + P  + DTP       M   A     +++       ++    ++A   ++L 
Sbjct: 196 SGIRSNTLLPAFV-DTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLL 254

Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD    + GTT I DGG 
Sbjct: 255 SDDASMITGTTQIADGGT 272

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  199 bits (508), Expect = 6e-63
 Identities = 65/267 (24%), Positives = 104/267 (38%), Gaps = 29/267 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+VALITGG SG+G  +  +F   GA VA++ +  + L     A    G  AVG  GD
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA-----AGNFLVSAEDLSPNGFRTVMDIDSVGT 126
           VR  +  K+  E     FGK+D L+  A     +       ED     F  +  ++  G 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
                  L  L            GS++   +   +  +       A K AV  + R +A 
Sbjct: 120 IHAVKACLPALVS--------SRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAF 171

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLA---------PDEINSKARDYMPLYKLGEKWDI 237
           E      +RVNG+APG + +T      +            +    +  +P+ ++    + 
Sbjct: 172 ELAP--HVRVNGVAPGGM-NTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEY 228

Query: 238 AMAALYLTSDTG-KYVNGTTLIVDGGL 263
             A ++  +        G  L  DGG+
Sbjct: 229 TGAYVFFATRGDSLPATGALLNYDGGM 255

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  198 bits (506), Expect = 9e-63
 Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 15/256 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ A++TG GSGIG  I+  + + GA V   GR    +      +   G  A     D
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVAD 87

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   E A  V E       ++D+LVN A       AE++S   +R V+ ++    + +  
Sbjct: 88  LADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSR 146

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
                +          G G I+ I++ L +         AA+K AV  +TR LA EW A 
Sbjct: 147 SFGTAMLA-------HGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEW-AG 198

Query: 192 YDIRVNGIAPGPIGDTPGMNK--LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
             + VN +APG +  T        A DE  ++    +P  +     D+   A++L SD  
Sbjct: 199 RGVGVNALAPGYV-VTA-NTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAA 256

Query: 250 KYVNGTTLIVDGGLWL 265
            YV+G  L VDGG WL
Sbjct: 257 SYVHGQVLAVDGG-WL 271

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  198 bits (506), Expect = 9e-63
 Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 19/262 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI--KAVGFE 69
              +V LITGGGSG+G   + +    GA ++++    + L+A+ +A+       + +   
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
            DV  +   +  V +T E FG++D    NA         E  +   F  V+ I+  G F 
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
              + LK +++        G G ++N ++         Q   AAAK  V  +TRN A+E+
Sbjct: 131 GLEKVLKIMRE-------QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEY 183

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLA-------PDEINSKARDYMPLYKLGEKWDIAMAA 241
              Y IR+N IAPG I  TP +           P +   +     P  + GE  +IA   
Sbjct: 184 -GRYGIRINAIAPGAI-WTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 241

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L SD   YVN T + +DGG 
Sbjct: 242 AFLLSDDASYVNATVVPIDGGQ 263

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  198 bits (505), Expect = 1e-62
 Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 17/259 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KVA+ITGG  GIG   +  F ++GA V I            + + S          D
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 72

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA--AGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           V + E  + +V++T    GKLDI+            S  +     F+ VMDI+  G F +
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRNLALEW 188
              A + +         A  GSI+  ++   +TA     HV  A K AV  +T +L  E 
Sbjct: 133 AKHAARVMIP-------AKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTEL 185

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYL 244
           G  Y IRVN ++P  +  +P +  +   + +               L    D+A A  YL
Sbjct: 186 GE-YGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL 243

Query: 245 TSDTGKYVNGTTLIVDGGL 263
             D  KYV+G  L++DGG 
Sbjct: 244 AGDESKYVSGLNLVIDGGY 262

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  195 bits (497), Expect = 2e-61
 Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 12/259 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEG 70
            +G++AL+TGGG+G+G  I+      G SV I GRR  VLDAA   +    G        
Sbjct: 31  GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVC 90

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           DV   +    +  +    F +LD+LV NA +    V  E+++   +  ++  +  G F  
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
              A + +K   P      GG I+N  +    T         A K A+  +T++ AL+  
Sbjct: 151 TQHAFRMMKAQTP-----RGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDG- 204

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT- 248
             +DI    I  G    T    +++   + +     +          IA A +Y+ S   
Sbjct: 205 RMHDIACGQIDIGNA-ATDMTARMSTGVLQANGE--VAAEPTIPIEHIAEAVVYMASLPL 261

Query: 249 GKYVNGTTLIVDGGLWLSR 267
              V   T++      + R
Sbjct: 262 SANVLTMTVMATRMPLVGR 280

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  194 bits (495), Expect = 2e-61
 Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 23/259 (8%)

Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IK 64
           K D+L  ++ L+TG   GIG E +  + ++GA+V ++GR ++ L    S +        +
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQ 65

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDS 123
               +      E+ +++ +    ++ +LD ++ NA     +    + +P  ++ VM ++ 
Sbjct: 66  WFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNV 125

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRN 183
             TF +    L  L K       +  GS++  S+++           AA+K A + + + 
Sbjct: 126 NATFMLTQALLPLLLK-------SDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQV 178

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           LA E+     +RVN I PG    T       P E            KL    DI    L+
Sbjct: 179 LADEYQQ--RLRVNCINPGGT-RTAMRASAFPTE---------DPQKLKTPADIMPLYLW 226

Query: 244 LTSDTGKYVNGTTLIVDGG 262
           L  D  +   G T     G
Sbjct: 227 LMGDDSRRKTGMTFDAQPG 245

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  194 bits (496), Expect = 3e-61
 Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 30/262 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              KVA++TGG SGIG  +     ++GA V  +   ++         +           D
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +E  K+ VE T + +G++DILVN A               +R ++D++  G++ M  
Sbjct: 62  VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAK 121

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +  +          G GSI+NI++   Y A+        +K A+  +TR++A+++   
Sbjct: 122 YTIPVMLA-------IGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP- 173

Query: 192 YDIRVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
             IR N + PG I  TP          G ++ A +    +     P+ ++G   ++A   
Sbjct: 174 -KIRCNAVCPGTI-MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVV 231

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L SD   ++ G  L VDGGL
Sbjct: 232 AFLASDRSSFITGACLTVDGGL 253

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  194 bits (496), Expect = 3e-61
 Identities = 76/257 (29%), Positives = 116/257 (45%), Gaps = 17/257 (6%)

Query: 12  LKGKVALITG--GGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSAL-RSLGIKAVG 67
           LKGKV ++TG  G  G+G E +    + GA+VAI    R Q  +  V  L ++ GIKA  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           ++  V   E  +K+V+     FG++D  +  A         D S   +  V+ +D  GTF
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF 137

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNIS--ATLHYTASWYQIHVAAAKAAVDAITRNLA 185
                   + K+        G GS++  +  +         Q     AKA    + R+LA
Sbjct: 138 HCAKAVGHHFKE-------RGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLA 190

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            EW  D+  RVN I+PG I DT  ++   P E        +P+ + G   ++  A +Y  
Sbjct: 191 NEW-RDF-ARVNSISPGYI-DTG-LSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFA 246

Query: 246 SDTGKYVNGTTLIVDGG 262
           SD   Y  G  L++DGG
Sbjct: 247 SDASTYTTGADLLIDGG 263

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  194 bits (495), Expect = 3e-61
 Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 26/261 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +GKVAL+TG   GIG  + T     GA VA+  R    + A +              GD
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGD 74

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +R   +A  +  +     G+LDI+VN A         + +   +   + ++    F +C 
Sbjct: 75  LREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICR 134

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A+  +         AGGG+I+N+++                KAA+ ++T+ + ++    
Sbjct: 135 AAIPLMAA-------AGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQ 187

Query: 192 YDIRVNGIAPGPIGDTP------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
             IR+N + P  + +TP            PD   ++    +PL ++ E  DIA   L+L 
Sbjct: 188 -GIRINAVCPNEV-NTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA 245

Query: 246 SDTGKYVNGTTLIVDGGLWLS 266
           SD  +Y+ G+ + V+GG  ++
Sbjct: 246 SDAARYLCGSLVEVNGGKAVA 266

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  192 bits (490), Expect = 1e-60
 Identities = 64/254 (25%), Positives = 99/254 (38%), Gaps = 21/254 (8%)

Query: 8   KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA-- 65
             ++LKG+V L+TG   GIG   +  +  HGASV ++GR +  L      ++S G     
Sbjct: 8   HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPL 67

Query: 66  -VGFEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDS 123
            +    +    +  +++       FG+LD L+ NA+        E L    F  VM ++ 
Sbjct: 68  IIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNV 127

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRN 183
             TF +    L  LK+       +   SI   S+++             +K A + + + 
Sbjct: 128 NATFMLTRALLPLLKR-------SEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQT 180

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           LA E      +R N I PG    T    +  PDE         PL       DI    LY
Sbjct: 181 LADELEGVTAVRANSINPGAT-RTGMRAQAYPDEN--------PL-NNPAPEDIMPVYLY 230

Query: 244 LTSDTGKYVNGTTL 257
           L       +NG  L
Sbjct: 231 LMGPDSTGINGQAL 244

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  193 bits (492), Expect = 1e-60
 Identities = 59/261 (22%), Positives = 99/261 (37%), Gaps = 25/261 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIK 64
           L+GK   I+GG  GIG  I+ +    GA+VA++ +  +        +  A   +   G +
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           A+   GD+R  +     V  T E FG +DI VN A+   L S E++    F  +  I   
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV-AAAKAAVDAITRN 183
           GT+ +    + ++K             IL +S  +     W +      AK  +      
Sbjct: 127 GTYAVSQSCIPHMKG-------RDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALG 179

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           +A E   D  I  N + P     T  +  L   +          + +  +    A AA  
Sbjct: 180 IAEEL-RDAGIASNTLWPRTTVATAAVQNLLGGDE--------AMARSRKPEVYADAAYV 230

Query: 244 LTSDTGKYVNGTTLIVDGGLW 264
           + +       G TL+ +  L 
Sbjct: 231 VLNK-PSSYTGNTLLCEDVLL 250

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  191 bits (488), Expect = 3e-60
 Identities = 57/265 (21%), Positives = 104/265 (39%), Gaps = 20/265 (7%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            KVA++TGG  GIG  IS +    G  +A+  + ++++     +  + +   KAV    D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  + +    ++   E  G  D+LVN A    +    +++    + +  ++    F    
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A +   + G        G I+N ++             +  K AV  +T+  A E  A 
Sbjct: 122 AASRKFDELG------VKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQEL-AP 174

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA----------PDEINSKARDYMPLYKLGEKWDIAMAA 241
               VN  APG +  T    ++             E   +    + L +     D+A   
Sbjct: 175 KGHTVNAYAPGIV-GTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV 233

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLS 266
            +L S+   YV G  ++VDGG+  +
Sbjct: 234 SFLASENSNYVTGQVMLVDGGMLYN 258

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  191 bits (487), Expect = 5e-60
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 31/272 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KV ++TG   GIG  I+ +F   G+ V  +       D           K    E D
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH----DPG-------EAKYDHIECD 54

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  K  ++  F+ +G + +LVN A        E +S   +R ++D++  G +    
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A+ Y+ +       +   SI+NIS+      +        +K AV  +T+++AL++   
Sbjct: 115 FAIPYMIR-------SRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP- 166

Query: 192 YDIRVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
             +R N + P  I DTP          G + +  ++  S+     P+ ++G+  ++A A 
Sbjct: 167 -LLRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAV 224

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPK 273
            +L S    ++ GT L VDGGL +  P   P+
Sbjct: 225 AFLASREASFITGTCLYVDGGLSIRAPISTPE 256

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  191 bits (487), Expect = 7e-60
 Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 19/264 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
               VA++TGG  GIG  I+      G  +AI G    + +   ++ L  LG + +    
Sbjct: 27  KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRA 86

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAA------AGNFLVSAEDLSPNGFRTVMDIDSV 124
           D+      +  V++    FG++D LVN A        +FL    DL P  F T++ ++  
Sbjct: 87  DLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFL----DLKPENFDTIVGVNLR 142

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
           GT       LK +       S     SI+NI++      S  ++    +KA + A ++ L
Sbjct: 143 GTVFFTQAVLKAMLASDARAS----RSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGL 198

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD-YMPLYKLGEKWDIAMAALY 243
           AL       I V  + PG I  +  M      + +       +P+ + GE  DI      
Sbjct: 199 ALRLAE-TGIAVFEVRPGII-RSD-MTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAG 255

Query: 244 LTSDTGKYVNGTTLIVDGGLWLSR 267
           L      +  G+ +  DGGL + R
Sbjct: 256 LAGGQFGFATGSVIQADGGLSIGR 279

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  190 bits (484), Expect = 7e-60
 Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 22/256 (8%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
            +AL+T      G        + G +V                      +  G       
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE----SENPG--TIALA 55

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAA---GNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           ++  +++V++T +H   +D +V+          +  E  S    R + +  S+    +  
Sbjct: 56  EQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A+  L+        AGG S++ I++++      Y      A+AA  A+  + A      
Sbjct: 116 SAIAPLRA-------AGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSR- 167

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTSD 247
             I +  I P    + P     +  E N + R+ +    PL +LG   ++     +L S 
Sbjct: 168 DGILLYAIGPNFF-NNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASR 226

Query: 248 TGKYVNGTTLIVDGGL 263
               + G      GG 
Sbjct: 227 RAAPIVGQFFAFTGGY 242

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  190 bits (485), Expect = 9e-60
 Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 18/262 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVAL+TG G GIG  I+ +  K G +VAI         A  S +   G  AV  + DV  
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           ++     VE   +  G  D++VN A        E ++P     V +I+  G       A+
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
           +  KK G       GG I+N  +   +  +      +++K AV  +T+  A +  A   I
Sbjct: 123 EAFKKEG------HGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDL-APLGI 175

Query: 195 RVNGIAPGPIGDTPGMNKLA----------PDEINSKARDYMPLYKLGEKWDIAMAALYL 244
            VNG  PG +  TP   ++                ++    + L +L E  D+A    YL
Sbjct: 176 TVNGYCPGIV-KTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234

Query: 245 TSDTGKYVNGTTLIVDGGLWLS 266
            S    Y+ G +L++DGG+  +
Sbjct: 235 ASPDSDYMTGQSLLIDGGMVFN 256

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  191 bits (487), Expect = 1e-59
 Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 17/259 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA--VSALRSLGIKAVGFE 69
           LK + AL+TGG SGIG   +  + + GA VAI     +  DA    + +   G KAV   
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFT 128
           GD+  +  A+ +V    E  G LDIL   A     +   +DL+   F+    ++    F 
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +  EA+  L K         G SI+  S+   Y  S + +  AA KAA+   +R LA + 
Sbjct: 167 ITQEAIPLLPK---------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
            A+  IRVN +APGPI  T  +        +   +     P+ + G+  ++A   +YL S
Sbjct: 218 -AEKGIRVNIVAPGPI-WTA-LQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274

Query: 247 DTGKYVNGTTLIVDGGLWL 265
               YV      V GG  L
Sbjct: 275 QESSYVTAEVHGVCGGEHL 293

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  190 bits (484), Expect = 2e-59
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 9/254 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
               V L+TGG  GIG  +     + G  V +     ++  DA V+A+   G +AV   G
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDIDSVGTFTM 129
           DV        +  +    FG+LD LVN A         +++S      ++ ++  G+   
Sbjct: 84  DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-IHVAAAKAAVDAITRNLALEW 188
             EA++ + +   G+    GG+I+N+S+      S  Q +  AA+KAA+D  T  LA E 
Sbjct: 144 AAEAVRRMSRLYSGQ----GGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREV 199

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
            A+  IRVN + PG I +T         +   +    +P+ + G   ++A A LYL S +
Sbjct: 200 AAE-GIRVNAVRPGII-ETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPS 257

Query: 249 GKYVNGTTLIVDGG 262
             YV G+ L V GG
Sbjct: 258 ASYVTGSILNVSGG 271

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  189 bits (482), Expect = 3e-59
 Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 21/264 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ A++TGG  GIG  I+    K GA+VAI         A V+ L +        E D
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---GGFAVEVD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V ++      ++   +  G  D+L   A  + +  A D++   +    D+++ G F    
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A ++             G I+N ++      +    H +A+K AV   T+ LA E  A 
Sbjct: 127 IACRHFLASN------TKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREM-AP 179

Query: 192 YDIRVNGIAPGPIGDTPGMNKLA----------PDEINSKARDYMPLYKLGEKWDIAMAA 241
            +IRVN + PG +  T    +            P+ + ++     PL ++ E  D+A   
Sbjct: 180 KNIRVNCVCPGFV-KTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWL 265
           ++L SD  +++ G  + V GG+ +
Sbjct: 239 VFLASDAARFMTGQGINVTGGVRM 262

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  189 bits (482), Expect = 4e-59
 Identities = 76/253 (30%), Positives = 115/253 (45%), Gaps = 12/253 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEG 70
              KVA++TG   GIG  I+ +    G +V I    +    +     + + G KA+  + 
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQA 84

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV      +++  +  E FG +D+LVN A    L +  +     F  V+ ++  GTF   
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTL 144

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA + L+          GG I+N+S +            AAAKA V+A+T  L+ E   
Sbjct: 145 REAAQRLRV---------GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRG 195

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
             DI VN +APGP   T    +   DE+  +     PL +LG   DIA A  +L    G 
Sbjct: 196 -RDITVNAVAPGPT-ATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGA 253

Query: 251 YVNGTTLIVDGGL 263
           +VNG  L  +GG+
Sbjct: 254 WVNGQVLRANGGI 266

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  188 bits (480), Expect = 6e-59
 Identities = 78/266 (29%), Positives = 120/266 (45%), Gaps = 24/266 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK  L+TG  SGIG      F + GAS+  + R +++L  AV+A   L  +A+    D
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLVSAEDLSPNGFRTVMDIDSVGTF 127
           V   +  + V     E FG+L  + +  AG           +L    +  V+ ++  G+F
Sbjct: 61  VSDPKAVEAVFAEALEEFGRLHGVAH-FAGVAHSALSW---NLPLEAWEKVLRVNLTGSF 116

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +  +A + L++         GGS++   +      ++   H AA K  V  + R LALE
Sbjct: 117 LVARKAGEVLEE---------GGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALE 166

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
                 +RVN + PG I  TP M    P     +     PL + G   ++A AAL+L S+
Sbjct: 167 LAR-KGVRVNVLLPGLI-QTP-MTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSE 223

Query: 248 TGKYVNGTTLIVDGGLWLSRPRHLPK 273
              Y+ G  L VDGG  +  P  LP 
Sbjct: 224 ESAYITGQALYVDGGRSIVGPPGLPP 249

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  186 bits (476), Expect = 1e-58
 Identities = 56/262 (21%), Positives = 97/262 (37%), Gaps = 32/262 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
                 L+TGG  GIG  +     ++     I    +Q   A               + D
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE---------NLKFIKAD 52

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           + +Q+    V++         D +   A      S  D+     + V+D++   +     
Sbjct: 53  LTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
                LK          G SI+   +   + A         +K A+  +T++LAL+  A 
Sbjct: 111 GLENNLKV---------GASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDL-AK 160

Query: 192 YDIRVNGIAPGPIGDTPGMNKL----------APDEINSKARDYMPLYKLGEKWDIAMAA 241
           Y IRVN + PG + DT     L          + DE   +     PL ++ +  +IA   
Sbjct: 161 YQIRVNTVCPGTV-DTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELV 219

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
           ++L SD  K++ G  + +DGG 
Sbjct: 220 IFLLSDKSKFMTGGLIPIDGGY 241

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  185 bits (473), Expect = 7e-58
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 25/261 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
           + GKVAL+TG   GIG   +      GA VA++    +      +AL       K +  +
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV  Q+  +       +HFG+LDILVN A    + + ++     +   + I+ V   + 
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSVISG 116

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
            +  L Y+ K   G     GG I+N+S+         Q    A+K  +   TR+ AL   
Sbjct: 117 TYLGLDYMSKQNGGE----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172

Query: 190 -ADYDIRVNGIAPGPIGDTPGMNKLAPD-------EINSKARDYMPLYKLGEKWDIAMAA 241
             +  +R+N I PG + +T  +  +  +       E     +D +  Y + +   IA   
Sbjct: 173 LMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 231

Query: 242 LYLTSDTGKYVNGTTLIVDGG 262
           + L  D    +NG  + +   
Sbjct: 232 ITLIED--DALNGAIMKITTS 250

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  185 bits (473), Expect = 7e-58
 Identities = 80/253 (31%), Positives = 114/253 (45%), Gaps = 15/253 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GK A +TGG  GIG  I+ +    GA+VA+      +   A VS +   G +AV    
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D R  E  ++ +  T E  G LDILVN+A        E+ +   F  VM ++    F   
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAI 148

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALEWG 189
             A ++L           GG I+ I + L     W      +A+KAA+  +T+ LA + G
Sbjct: 149 RSASRHLGD---------GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLG 199

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
               I VN + PG   DT  MN    D   +  R+ +     GE  DIA    +L    G
Sbjct: 200 P-RGITVNIVHPGST-DTD-MNPADGDHAEA-QRERIATGSYGEPQDIAGLVAWLAGPQG 255

Query: 250 KYVNGTTLIVDGG 262
           K+V G +L +DGG
Sbjct: 256 KFVTGASLTIDGG 268

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  185 bits (471), Expect = 8e-58
 Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 24/258 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKV ++T    GIG   +  F + GA V      +  L                   D
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-----PGIQTRVLD 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +++     ++       +LD+L N A      +  D     +   M+++    + M  
Sbjct: 59  VTKKK----QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHVAAAKAAVDAITRNLALEWGA 190
             L  +            G+I+N+S+          +   +  KAAV  +T+++A ++  
Sbjct: 115 AFLPKMLA-------QKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADF-I 166

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
              IR N + PG + DTP + +       P+E  +         +     +IAM  +YL 
Sbjct: 167 QQGIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA 225

Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD   YV G  +I+DGG 
Sbjct: 226 SDESAYVTGNPVIIDGGW 243

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  186 bits (474), Expect = 8e-58
 Identities = 73/274 (26%), Positives = 110/274 (40%), Gaps = 30/274 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-------------GRRKQVLDAAVSAL 58
           L+G+VA ITG   G G   + +    GA +  +                   L   V  +
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 59  RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
            +   + V    D R  +  +KVV+      G+LDI+V  A      + +D++P  FR V
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
           MDI+  GT+         + +GG       GGSI+ IS+        + IH  A+K AV 
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGG------RGGSIILISSAAGMKMQPFMIHYTASKHAVT 182

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTP---------GMNKLAPDEINSKARDYMPLY 229
            + R  A E    + IRVN + PGP+ +TP             +  +   S         
Sbjct: 183 GLARAFAAEL-GKHSIRVNSVHPGPV-NTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240

Query: 230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            + E  DIA    +L SD  + V    + VD G 
Sbjct: 241 WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  185 bits (473), Expect = 1e-57
 Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 39/283 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM----------------GRRKQVLDAAV 55
           ++GKVA +TG   G G   + +  + GA +  +                    + L    
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 56  SALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNG 114
             ++    + V  E DVR  +  K  V+S  E  G+LDI+V NA  GN   + +  S   
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128

Query: 115 FRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK 174
           +  ++DI+  G +      + ++  GG       GGSI+  S+     A  +  H  AAK
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGG------RGGSIILTSSVGGLKAYPHTGHYVAAK 182

Query: 175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP------GMNKLAPDEINSKARDYMPL 228
             V  + R   +E    + IRVN + P  +  TP            PD  N    D  P+
Sbjct: 183 HGVVGLMRAFGVEL-GQHMIRVNSVHPTHV-KTPMLHNEGTFKMFRPDLENPGPDDMAPI 240

Query: 229 YKL--------GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            ++         E  DI+ A L+  SD  +Y+ G TL +D G 
Sbjct: 241 CQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  185 bits (472), Expect = 1e-57
 Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 14/248 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              K+A++TG GSG+G  ++      G  VA+ GRR   L    +    +G  A+    D
Sbjct: 26  TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE---IGDDALCVPTD 82

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V   +  + +  +T E FG++D+L  NA  G   +  EDL+   ++ V+D +  G F   
Sbjct: 83  VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCT 142

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA + +K   P      GG I+N  +    +   Y     A K A+  +T++ +L+   
Sbjct: 143 QEAFRVMKAQEP-----RGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDG-R 196

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD-TG 249
            +DI    I  G   DTP   K+       +A   + +  + +   +A A +Y+ S    
Sbjct: 197 VHDIACGQIDIGNA-DTPMAQKMKAGVP--QADLSIKVEPVMDVAHVASAVVYMASLPLD 253

Query: 250 KYVNGTTL 257
             V   T+
Sbjct: 254 ANVQFMTI 261

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  185 bits (472), Expect = 1e-57
 Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 29/273 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-------------LDAAVSAL 58
           L+G+VA ITG   G G   + +    GA +        V             LD     +
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 59  RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
              G KA+    DVR     +++V    E FG+LD++V  A         +L+   + TV
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
           + ++  GT+      +  + + G       GGSI+ +S++    A+    H +A+K  + 
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAG------NGGSIVVVSSSAGLKATPGNGHYSASKHGLT 186

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTP--------GMNKLAPDEINSKARDYMPLYK 230
           A+T  LA+E   +Y IRVN I P  + +TP         +    P  ++S     +    
Sbjct: 187 ALTNTLAIEL-GEYGIRVNSIHPYSV-ETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNG 244

Query: 231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
                ++A    +L  D    + GT + VD G 
Sbjct: 245 FMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  184 bits (469), Expect = 2e-57
 Identities = 73/259 (28%), Positives = 110/259 (42%), Gaps = 18/259 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEG 70
           L+G+  ++TGG  GIG  I+T F + GA+VA+ GR    +DA V+ L  L   K +G + 
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     +     E FG +D++   A          ++P     +  ++  GTF   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAV 127

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY----QIHVAAAKAAVDAITRNLAL 186
              L  L         +G G ++  S+    T          H  A KAA     R  A+
Sbjct: 128 QACLDALIA-------SGSGRVVLTSSI---TGPITGYPGWSHYGATKAAQLGFMRTAAI 177

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E    + I VN I PG I  T G+ +   +E  +     +P   LG   DI   A +L +
Sbjct: 178 ELAP-HKITVNAIMPGNI-MTEGLLEN-GEEYIASMARSIPAGALGTPEDIGHLAAFLAT 234

Query: 247 DTGKYVNGTTLIVDGGLWL 265
               Y+ G  + VDGG  L
Sbjct: 235 KEAGYITGQAIAVDGGQVL 253

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  183 bits (466), Expect = 6e-57
 Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 22/266 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKGK AL+TG  SGIG  I+    + GA++ + G        A++ +   G+KAV    D
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPAD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      + +       FG +DILVN A    +   E      +  ++ ++    F    
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            AL  ++           G I+NI++      S  +    AAK  V  +T+ + LE  A 
Sbjct: 120 LALPGMRA-------RNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLE-TAT 171

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINS------KARDYM----PLYKLGEKWDIAMAA 241
            ++  N I PG +  TP + K   D   +         D +    P         +    
Sbjct: 172 SNVTCNAICPGWV-LTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLSR 267
           L+L S+ G  V G    VDGG WL++
Sbjct: 231 LFLCSEAGSQVRGAAWNVDGG-WLAQ 255

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  183 bits (466), Expect = 7e-57
 Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 22/263 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL+TG G GIG  ++   G+ GA V +      +  +  VS +++LG  A+  + 
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+R+     K+ +    HFG LDI V+ +        +D++   F  V  +++ G F + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALEWG 189
            EA ++L +         GG I+  S+      S       + +K AVD+  R  + + G
Sbjct: 136 REAYRHLTE---------GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG 186

Query: 190 ADYDIRVNGIAPGPI----------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAM 239
               I VN +APG               P       ++    A    PL++ G   D+A 
Sbjct: 187 D-KKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVAN 245

Query: 240 AALYLTSDTGKYVNGTTLIVDGG 262
              +L S  G++VNG  L +DGG
Sbjct: 246 VVGFLVSKEGEWVNGKVLTLDGG 268

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  182 bits (465), Expect = 1e-56
 Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 23/264 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL TG G GIG  I+ + G+ GASV +  G   +  +  V+ L+ LG + V  + 
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+ +      + +    HFG LD +++ +         +++   F  V ++++ G F + 
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 138

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATL-HYTASWYQIHVAAAKAAVDAITRNLALEWG 189
            + LK+ ++         GG I+  S+     T        A +KAAV+   R  A++ G
Sbjct: 139 QQGLKHCRR---------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCG 189

Query: 190 ADYDIRVNGIAPGPI-----------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
           A   + VN IAPG +               G   +  ++I+    +  PL ++G   DI 
Sbjct: 190 A-KGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG 248

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
            A   L  +  +++NG  + + GG
Sbjct: 249 RAVSALCQEESEWINGQVIKLTGG 272

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  182 bits (465), Expect = 2e-56
 Identities = 69/282 (24%), Positives = 100/282 (35%), Gaps = 36/282 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM------------GRRKQVLDAAVSALR 59
           ++ KV L+TGG  G G   + +  + GA + +                 + L+ A   + 
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
             G KA   E DVR +    + + +    FGKLD++V  A          L    F    
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG--ICPLGAHLPVQAFADAF 125

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGR----SSAGGGSILNISATLHYTASWYQIHVAAAKA 175
           D+D VG     H AL YL  G         S  G                     + AK 
Sbjct: 126 DVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQ 183

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTP------GMNKLAPDEINSKARDYM--- 226
            VD+ T  LA +  A   IR N I P  + +T          +  PD       D +   
Sbjct: 184 LVDSYTLQLAAQL-APQSIRANVIHPTNV-NTDMLNSAPMYRQFRPDLEAPSRADALLAF 241

Query: 227 -PLYKLGEKW----DIAMAALYLTSDTGKYVNGTTLIVDGGL 263
             +  +   +    DI+ A  +L SD  +YV G    VD G 
Sbjct: 242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  182 bits (464), Expect = 2e-56
 Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 23/267 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L+GKVAL+TG G GIG E++ + G+ G  V +      +  +  V+A++  G  A   + 
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +V   E   ++ E   + FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-QIHVAAAKAAVDAITRNLALEWG 189
            EA K+L+          GG ++ + +      +       + +K A++   R +A++  
Sbjct: 147 REAYKHLEI---------GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 197

Query: 190 ADYDIRVNGIAPGPI-----------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA 238
               I VN +APG I               G N    +     A  + PL ++G   DIA
Sbjct: 198 D-KKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA 256

Query: 239 MAALYLTSDTGKYVNGTTLIVDGGLWL 265
               +L S+ G +V G  + +DGG  +
Sbjct: 257 RVVCFLASNDGGWVTGKVIGIDGGACM 283

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  181 bits (462), Expect = 2e-56
 Identities = 56/251 (22%), Positives = 91/251 (36%), Gaps = 21/251 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L     LITG    +G   + +  +HG  V I  R +    A+V+ LR  G  AV   GD
Sbjct: 25  LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQAG--AVALYGD 79

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
              +      ++        L  +V+  A  +L        + F  +  +  +  + +  
Sbjct: 80  FSCETGIMAFIDLLKTQTSSLRAVVH-NASEWLAETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
                L         +    I++IS  +    S   I   A KA ++++T + A  +   
Sbjct: 139 HCEPLLTA-------SEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP- 190

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             ++VNGIAP  +               + A     L        I  +  YL      Y
Sbjct: 191 -LVKVNGIAPALL-MFQPK---DDAAYRANALAKSALGIEPGAEVIYQSLRYLLD--STY 243

Query: 252 VNGTTLIVDGG 262
           V GTTL V+GG
Sbjct: 244 VTGTTLTVNGG 254

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  182 bits (463), Expect = 3e-56
 Identities = 69/274 (25%), Positives = 108/274 (39%), Gaps = 25/274 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSL-GIKAVGFE 69
            +   A+ITGG   IG  I+ +  + G  V +  R  +      V+ L +     AV  +
Sbjct: 9   SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 68

Query: 70  GDVRRQE----HAKKVVESTFEHFGKLDILVNAA-----------AGNFLVSAEDLSPNG 114
           GD+          + +++ +F  FG+ D+LVN A                 +        
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128

Query: 115 FRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK 174
              +   ++V    +     +   +GG  R  +   S++N+   +             AK
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWR--SRNLSVVNLCDAMTDLPLPGFCVYTMAK 186

Query: 175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKL-GE 233
            A+  +TR  ALE      IRVN +APG     P      P E   + R  +PL +    
Sbjct: 187 HALGGLTRAAALELAP-RHIRVNAVAPGLS-LLPPA---MPQETQEEYRRKVPLGQSEAS 241

Query: 234 KWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
              IA A  +L S    Y+ GTTL VDGGL L+R
Sbjct: 242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  182 bits (464), Expect = 3e-56
 Identities = 83/255 (32%), Positives = 128/255 (50%), Gaps = 15/255 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA--VSALRSLGIKAVGFE 69
           LKGK  LITGG SGIG  +S  F K GA++AI    ++  DA      +   G+K V   
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEG-DANETKQYVEKEGVKCVLLP 103

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFT 128
           GD+  ++H K +V+ T    G L+ILVN  A  +     E ++         I+    F 
Sbjct: 104 GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH 163

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +   AL +LK+         G  I+N ++ + Y  +   I  +A K A+ A TR+L+   
Sbjct: 164 VTKAALSHLKQ---------GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSL 214

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
                IRVNG+APGPI  TP +     ++  S+    +P+ + G+ +++A A +YL S  
Sbjct: 215 -VQKGIRVNGVAPGPI-WTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSD 272

Query: 249 GKYVNGTTLIVDGGL 263
             YV G  + V+GG+
Sbjct: 273 SSYVTGQMIHVNGGV 287

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  182 bits (463), Expect = 6e-56
 Identities = 71/279 (25%), Positives = 118/279 (42%), Gaps = 35/279 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------------LDAAVSALR 59
           ++GKVA ITG   G G   +    + GA +  +   KQ+            L   V  + 
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTV 118
           +LG + +  + DVR  +  +  V+      G+LDI++ NAA  +       + P  +R +
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
           +D++  G +     A+ ++  G        GGSI+  S+      +    +  A+K  + 
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGK------RGGSIVFTSSIGGLRGAENIGNYIASKHGLH 199

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTP------GMNKLAPDEINSKARDYMPLYK-- 230
            + R +ALE     +IRVN + P  +  TP            PD  N    D+    +  
Sbjct: 200 GLMRTMALEL-GPRNIRVNIVCPSSV-ATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM 257

Query: 231 ------LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
                   E  DI+ A L+L SD  +Y+ G +L VDGG 
Sbjct: 258 HVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA 296

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  180 bits (459), Expect = 7e-56
 Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 26/254 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            + KV +ITG   GIG  +   +      V    R         S   S         GD
Sbjct: 26  NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR---------SIKPSADPDIHTVAGD 76

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           + + E A ++V    E FG++D LVN A         +++   +   + ++  G F +  
Sbjct: 77  ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ 136

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA--AKAAVDAITRNLALEWG 189
            A   + K        G G I++I+ +L            A   K  ++A+TR+LA+E+ 
Sbjct: 137 RAAAEMLK-------QGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEF- 188

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           +   +RVN ++PG I  TP M+   P E +S      P+ ++GE  D+  A LYL  +  
Sbjct: 189 SRSGVRVNAVSPGVI-KTP-MH---PAETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHA 241

Query: 250 KYVNGTTLIVDGGL 263
            ++ G  L VDGG 
Sbjct: 242 GFITGEILHVDGGQ 255

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  180 bits (458), Expect = 8e-56
 Identities = 54/253 (21%), Positives = 85/253 (33%), Gaps = 32/253 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              K  L+ GG   +G E+   F     +   +  R+                   F   
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN------------PNADHSFTIK 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMC 130
              +E  K V+E       K+D  V AA G    +A  D      + ++D++    F   
Sbjct: 68  DSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASA 127

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
           H   K L +         GG  +   A+     +   I   A KAA   I ++LA E G 
Sbjct: 128 HIGAKLLNQ---------GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGG 178

Query: 191 D-YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
                   GI P  + DTP   K   D       D+ PL ++ E         + T+   
Sbjct: 179 LPAGSTSLGILPVTL-DTPTNRKYMSDA---NFDDWTPLSEVAE-----KLFEWSTNSDS 229

Query: 250 KYVNGTTLIVDGG 262
           +  NG+ +  +  
Sbjct: 230 RPTNGSLVKFETK 242

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  180 bits (458), Expect = 1e-55
 Identities = 78/270 (28%), Positives = 117/270 (43%), Gaps = 23/270 (8%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA--LRSLGIKAVGF 68
           +LKGKVA++TG  SGIG  I+T     GA + + G         V A      G+K +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+ + E  + +V++     G++DILVN A        ED     +  ++ ++    F 
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
               AL ++KK        G G I+NI++     AS  +    AAK  V   T+  ALE 
Sbjct: 121 GTAAALPHMKK-------QGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINS-------KARDYM----PLYKLGEKWDI 237
            A   I  N I PG +  TP + K                AR+ +    P  +      +
Sbjct: 174 -AGQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
              A++L SD    + GTT+ VDGG W +R
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGG-WTAR 260

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  178 bits (455), Expect = 2e-55
 Identities = 41/262 (15%), Positives = 90/262 (34%), Gaps = 33/262 (12%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
             A++T      G   + +  + G +VA      +  D                +     
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE------AFAETYPQLKPMS 55

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAA----GNFLV--SAEDLSPNGFRTVMDIDSVGTFT 128
           ++   +++E+    +G++D+LV+          +   + ED     +R  ++   +  F 
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVED-----YRGAVEALQIRPFA 110

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           + +     +KK          G I+ I++   +          +A+A    +   L+ E 
Sbjct: 111 LVNAVASQMKK-------RKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKEL 163

Query: 189 GADYDIRVNGIAPGPIGDTP-------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           G  Y+I V  I P  +  +                E  +  +    L +LG + ++    
Sbjct: 164 GE-YNIPVFAIGPNYL-HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELV 221

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L S +  Y+ G    + GG 
Sbjct: 222 AFLASGSCDYLTGQVFWLAGGF 243

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  178 bits (454), Expect = 2e-55
 Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 24/256 (9%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           + AL+TGG  GIG  I+      G  VAI  R  +    ++         AV    D+ +
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL--------GAVPLPTDLEK 54

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
            +  K +V+   E  G L +LV+AAA N    A +LS   +R V+ +     F +   A 
Sbjct: 55  DD-PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWY--QIHVAAAKAAVDAITRNLALEWGADY 192
            ++ +       AG G +L I +   +TA           AK A+  +TR LA EW A  
Sbjct: 114 PHMAE-------AGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEW-ARL 165

Query: 193 DIRVNGIAPGPIGDTPGMNKLAPD--EINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
            IRVN + PG + +T           E+       +P+ +     +IA  A  L  D  +
Sbjct: 166 GIRVNLLCPGYV-ETE-FTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAE 223

Query: 251 YVNGTTLIVDGGLWLS 266
           Y+ G  + VDGG +L+
Sbjct: 224 YLTGQAVAVDGG-FLA 238

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  179 bits (457), Expect = 2e-55
 Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 23/269 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL--RSLGIKAVGFE 69
           +  K A+ITG  SGIG  I+    K GA++ + G         V+           +   
Sbjct: 23  MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHP 82

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            D+ +      ++    + FG  DILVN A   F+   ED     +  ++ ++   +F  
Sbjct: 83  ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
              A+  +KK        G G I+NI++     AS ++    AAK  +  +T+ +ALE  
Sbjct: 143 IRGAIPPMKK-------KGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALE-V 194

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-----------MPLYKLGEKWDIA 238
           A+  + VN I PG +  TP + K  PD+  ++                P  K      +A
Sbjct: 195 AESGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVA 253

Query: 239 MAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
             ALYL  D    + GT + +DGG W ++
Sbjct: 254 SLALYLAGDDAAQITGTHVSMDGG-WTAQ 281

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  179 bits (456), Expect = 4e-55
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 37/277 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM------------GRRKQVLDAAVSALR 59
           L GKVA ITG   G G   + +    GA +  +                + L A V  + 
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
            +G + V  + DVR +E     +++  +  G+LDI+V  A     ++      +G+  V+
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG----IAPMSAGDDGWHDVI 126

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL----HYTASWYQIHVAAAKA 175
           D++  G +     A+  L K G       GGSI+ IS++       +A    +   AAK 
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQG------TGGSIVLISSSAGLAGVGSADPGSVGYVAAKH 180

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTP-GMNKLAPDEINSKARDYMPLYKLGEK 234
            V  + R  A    A   IRVN I P  + +TP   N+   + +   A        +G  
Sbjct: 181 GVVGLMRVYANLL-AGQMIRVNSIHPSGV-ETPMINNEFTREWLAKMAAATDTPGAMGNA 238

Query: 235 W--------DIAMAALYLTSDTGKYVNGTTLIVDGGL 263
                    D+A A  +L SD  +Y+ G TL VD G 
Sbjct: 239 MPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  178 bits (453), Expect = 4e-55
 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 23/258 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK AL+TG   GIG  I+ +    GA+V +        + A +A  S+G KA     D
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINA---EGAKAAAASIGKKARAIAAD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           +      K +        G +DILVN  A             +      +R ++D++  G
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVN-NASIVPFVAWDDVDLDH-----WRKIIDVNLTG 114

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
           TF +       ++    G++    G +++I++   +  +       AAK  V   TR LA
Sbjct: 115 TFIVTRAGTDQMRAA--GKA----GRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALA 168

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E G  Y+I  N + PG I ++ G+     +E          +   G+   IA    +L 
Sbjct: 169 TELGK-YNITANAVTPGLI-ESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLA 226

Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD  +++ G TL VD G+
Sbjct: 227 SDDARWITGQTLNVDAGM 244

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  180 bits (458), Expect = 5e-55
 Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 34/278 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------------LDAAVSALR 59
           L+GKVA ITG   G G   + +  + GA +  +   +Q             L   V  + 
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
             G + +  + DVR     + VV+     FG +DILV+    +       L+   +  ++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDA 179
             + +G +  C   L  + + G       GGS++ +S+T+    +  Q H AA+K  V  
Sbjct: 164 QTNLIGAWHACRAVLPSMIERG------QGGSVIFVSSTVGLRGAPGQSHYAASKHGVQG 217

Query: 180 ITRNLALEWGADYDIRVNGIAPGPIGDTP------GMNKLAPDEINSKARDYMPLYK--- 230
           +  +LA E G  ++IRVN + PG + +T        +    P   N    D   L+    
Sbjct: 218 LMLSLANEVGR-HNIRVNSVNPGAV-NTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275

Query: 231 -----LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
                  E  D++ A  +L SD  +Y++G  + VDGG 
Sbjct: 276 LLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  177 bits (452), Expect = 6e-55
 Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 29/263 (11%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMG--RRKQVLDAAVSALRSLGIKAVGFEGD 71
           GKV L+TG   GIG  I            + G  R +  L          G +     GD
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +      K++V +  +  GK+D LV NA     + +  ++  N ++ + DI+     ++ 
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             AL  LKK          G+++ +S+              ++KAA++     LA E   
Sbjct: 119 GIALPELKK--------TNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--- 167

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA---------RDYMPLYKLGEKWDIAMAA 241
           +  ++   +APG + DT  M     + +   +         R      +L +    A   
Sbjct: 168 ERQVKAIAVAPGIV-DTD-MQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVY 225

Query: 242 LYL-TSDTGKYVNGTTLIVDGGL 263
             L        VNG  L  +   
Sbjct: 226 AKLALHGIPDGVNGQYLSYNDPA 248

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  178 bits (455), Expect = 7e-55
 Identities = 72/265 (27%), Positives = 107/265 (40%), Gaps = 30/265 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L  +  L+TGG  GIG  I+T F + GA+VA+  R  + L +  + L        +G   
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSV 124
           DV           +  + FG LD++    AG      L   + E         V+D++  
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCA-NAGIFPEARLDTMTPEQ-----LSEVLDVNVK 152

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY----QIHVAAAKAAVDAI 180
           GT       L  L         +G G ++  S+    T          H  A+KAA    
Sbjct: 153 GTVYTVQACLAPLTA-------SGRGRVILTSSI---TGPVTGYPGWSHYGASKAAQLGF 202

Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
            R  A+E      + VN I PG I  T G+  +  +E  S     +P+  LG   DI   
Sbjct: 203 MRTAAIELAP-RGVTVNAILPGNI-LTEGLVDM-GEEYISGMARSIPMGMLGSPVDIGHL 259

Query: 241 ALYLTSDTGKYVNGTTLIVDGGLWL 265
           A +L +D   Y+ G  ++VDGG  L
Sbjct: 260 AAFLATDEAGYITGQAIVVDGGQVL 284

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  177 bits (452), Expect = 1e-54
 Identities = 72/276 (26%), Positives = 112/276 (40%), Gaps = 23/276 (8%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS 60
            S   P  + + + + A +TG  SGIG  ++      G +V    R  + + AAV  LR+
Sbjct: 11  SSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA 70

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAA---AGNFLVSAEDLSPNGFRT 117
            G    G   DV   +     V +  E FG + ILVN+A    G       DL    +  
Sbjct: 71  AGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETA---DLDDALWAD 127

Query: 118 VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAV 177
           V+D +  G F +  E L+       G   AG G I+NI++T       Y     A+K  V
Sbjct: 128 VLDTNLTGVFRVTREVLRA-----GGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV 182

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMP 227
              T+++  E      I VN + PG + +TP              +   E++ +    +P
Sbjct: 183 VGFTKSVGFELAK-TGITVNAVCPGYV-ETPMAERVREGYARHWGVTEQEVHERFNAKIP 240

Query: 228 LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           L +     ++A    YL +D    +    L V GGL
Sbjct: 241 LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  178 bits (453), Expect = 1e-54
 Identities = 65/271 (23%), Positives = 110/271 (40%), Gaps = 23/271 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSAL-RSLGIKAVGFE 69
           ++   A++TG    IG  I+ +  + G  V I      +   +    L +     AV  +
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80

Query: 70  GDV----RRQEHAKKVVESTFEHFGKLDILVNAA-----AGNFLVSAED-----LSPNGF 115
            D+          ++++ S F  FG+ D+LVN A             ED           
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140

Query: 116 RTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA 175
             ++  +++  F +     +  K   P   ++   SI+N+   +              K 
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPN-CTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 199

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKL-GEK 234
           A+  +T++ ALE  A Y IRVNG+APG     P       +E   K R  +PL +     
Sbjct: 200 ALVGLTQSAALEL-APYGIRVNGVAPGVS-LLPVA---MGEEEKDKWRRKVPLGRREASA 254

Query: 235 WDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
             IA A ++L S + +Y+ G+ + VDGGL L
Sbjct: 255 EQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  177 bits (451), Expect = 1e-54
 Identities = 58/262 (22%), Positives = 101/262 (38%), Gaps = 25/262 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
              + ALIT G  G+G +++ +    G SV +        ++      + +  +    + 
Sbjct: 5   RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAG-----NFLV--SAEDLSPNGFRTVMDIDS 123
           DV ++E   K+VE    HFGK+D L+N A         LV    ++     +  ++  + 
Sbjct: 65  DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDE-----WNEMIQGNL 119

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT--LHYTASWYQIHVAAAKAAVDAIT 181
              F +    +  ++K          G I+N             Y+   AAAK  + ++T
Sbjct: 120 TAVFHLLKLVVPVMRK-------QNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLT 172

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           + +A E    Y I  N + PG I     M +    E         P+ + G   DIA   
Sbjct: 173 KTVAYEEAE-YGITANMVCPGDI-IGE-MKEATIQEARQLKEHNTPIGRSGTGEDIARTI 229

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L  D    + GT + V G +
Sbjct: 230 SFLCEDDSDMITGTIIEVTGAV 251

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  176 bits (450), Expect = 2e-54
 Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 29/268 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV--GFE 69
           LKGK AL+TG  +GIG  I+T     GA+V I GRR++ ++  +  +R+    A+     
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            D+  ++  + V+    E + K+DIL+N       V   D+    +  + +++ +    +
Sbjct: 68  ADLGTEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRL 123

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               LK + +          G ++ I++      S    H +A K    +++R+LA    
Sbjct: 124 TRSYLKKMIE-------RKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELT- 175

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPD--------------EINSKARDYMPLYKLGEKW 235
              ++ VN I PG    T G+  +                     + R    + +L    
Sbjct: 176 TGTNVTVNTIMPGST-LTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE 234

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +IA    +L+S     +NG+ L +DGGL
Sbjct: 235 EIAHLVTFLSSPLSSAINGSALRIDGGL 262

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  179 bits (455), Expect = 3e-54
 Identities = 71/262 (27%), Positives = 108/262 (41%), Gaps = 28/262 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIK 64
           L G    ITG   GIG  I+ +  K GA++ I  +  Q        +  A   + ++G K
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           A+    DVR ++     VE   + FG +DILVN A+   L +  D        +M++++ 
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA--AAKAAVDAITR 182
           GT+      + YLKK       +    ILNIS  L+    W++ H A   AK  +     
Sbjct: 163 GTYLASKACIPYLKK-------SKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVL 215

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
            +A E+    +I VN + P     T  M+ L    I S+ R             IA AA 
Sbjct: 216 GMAEEFK--GEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVD---------IIADAAY 264

Query: 243 YLTSDTGKYVNGTTLIVDGGLW 264
            +     K   G  +I +  L 
Sbjct: 265 SIFQK-PKSFTGNFVIDENILK 285

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  175 bits (446), Expect = 5e-54
 Identities = 55/262 (20%), Positives = 102/262 (38%), Gaps = 26/262 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GK   +TG G GIG+  +  F + GA V    +          A             D
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVMD 54

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V       +V +       +LD LVNAA    + + + LS   ++    ++  G F +  
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           + +   ++         GG+I+ +++   +T         A+KAA+ ++  ++ LE    
Sbjct: 115 QTMNQFRR-------QRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAG- 166

Query: 192 YDIRVNGIAPGPI--------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
             +R N ++PG            +    +        + +  +PL K+    +IA   L+
Sbjct: 167 SGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILF 226

Query: 244 LTSDTGKYVNGTTLIVDGGLWL 265
           L SD   ++    ++VDGG  L
Sbjct: 227 LASDLASHITLQDIVVDGGSTL 248

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  175 bits (447), Expect = 7e-54
 Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 27/267 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   D
Sbjct: 20  QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD 79

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA---AGNFLV--SAEDLSPNGFRTVMDIDSVGT 126
           VR     + +V +  E +G +D+LVN A    G      + E      +  V++ +  G 
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADEL-----WLDVVETNLTGV 134

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           F +  + LK       G    G G I+NI++T       +    +A+K  V   T+ L L
Sbjct: 135 FRVTKQVLKA-----GGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGL 189

Query: 187 EWGADYDIRVNGIAPGPIGDTP----------GMNKLAPDEINSKARDYMPLYKLGEKWD 236
           E      I VN + PG + +TP           + +++ +E   +    +P+ +  +  +
Sbjct: 190 ELAR-TGITVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 247

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +A    YL       V    L V GGL
Sbjct: 248 VAEMVAYLIGPGAAAVTAQALNVCGGL 274

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  174 bits (443), Expect = 2e-53
 Identities = 58/263 (22%), Positives = 108/263 (41%), Gaps = 22/263 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
           ++GK+A++T G SG+GF  + +  ++GA + +  R ++ L+AA S + SL  G +     
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           GD+R      ++ E      G  DILV +  G       +L    +     + +     +
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWV 123

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
              A + + +        G G ++ I +                +  V  + R LALE  
Sbjct: 124 GRRAAEQMVE-------KGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELA 176

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLA----------PDEINSKARDYMPLYKLGEKWDIAM 239
               + VN + P  I  T  +  LA           +E        +P+ ++G+  ++A 
Sbjct: 177 PH-GVTVNAVLPSLI-LTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELAS 234

Query: 240 AALYLTSDTGKYVNGTTLIVDGG 262
              +L S+   ++ G  + VDGG
Sbjct: 235 VVAFLASEKASFITGAVIPVDGG 257

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  173 bits (440), Expect = 2e-53
 Identities = 45/252 (17%), Positives = 87/252 (34%), Gaps = 24/252 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +     ++TG GSG+G  ++    + G  V++MGRR Q L         LG   +G   D
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE---LLLGNAVIGIVAD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   E       +  E  G  +++++ A           +    R VM+ + V T  +  
Sbjct: 58  LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ 117

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           + ++ +           GG + N+ ++        +    A+K  +     +L  E   D
Sbjct: 118 QTVRLIG--------ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAEL-KD 168

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY-LTSDTGK 250
             +R+  + P  I  +                   P        D A   L  L + +  
Sbjct: 169 SPLRLVNLYPSGI-RSE---------FWDNTDHVDPS-GFMTPEDAAAYMLDALEARSSC 217

Query: 251 YVNGTTLIVDGG 262
           +V    +  + G
Sbjct: 218 HVTDLFIGRNEG 229

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  173 bits (440), Expect = 4e-53
 Identities = 51/251 (20%), Positives = 92/251 (36%), Gaps = 25/251 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+VA++TG   GIG  I+ + G  GA V +  R  + L A    + + G +A     D
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           +   +             G+ D+LVN A     G  L     + P  +  ++ ++    +
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL---HTMKPAEWDALIAVNLKAPY 143

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +       +         A  G I+NIS+              A+K  ++ +  + A E
Sbjct: 144 LLLRAFAPAMIA-------AKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEE 196

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
               + +RV+ +APG +  T         + ++            E  DIA     L + 
Sbjct: 197 LRQ-HQVRVSLVAPGSV-RTE-FGVGLSAKKSALGA--------IEPDDIADVVALLATQ 245

Query: 248 TGKYVNGTTLI 258
             +      L+
Sbjct: 246 ADQSFISEVLV 256

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  173 bits (440), Expect = 1e-52
 Identities = 60/278 (21%), Positives = 110/278 (39%), Gaps = 35/278 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------------LDAAVSALR 59
            +GK ALITGG  G+G   +    + GA +AI  R +              L   V+ + 
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 60  SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
             G + +  + DV+ +   +  V    +  G +DI +  A  + +    ++    +  V+
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI 127

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDA 179
             +  GTF         + K          G I+ +S+ L ++A++ Q    ++K  V  
Sbjct: 128 GTNLTGTFNTIAAVAPGMIK-------RNYGRIVTVSSMLGHSANFAQASYVSSKWGVIG 180

Query: 180 ITRNLALEWGADYDIRVNGIAPGPIGDTP--------------GMNKLAPDEINSKARDY 225
           +T+  A +    Y I VN +APG I +TP                     D  +  A  +
Sbjct: 181 LTKCAAHDLVG-YGITVNAVAPGNI-ETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLH 238

Query: 226 MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +      +  ++  A L+L  +   ++ GT L +D G 
Sbjct: 239 LQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA 276

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  171 bits (435), Expect = 3e-52
 Identities = 79/269 (29%), Positives = 129/269 (47%), Gaps = 29/269 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK------- 64
           L+  +AL+TG GSGIG  +S +    GA+VA     +      V  L   G K       
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGK-LDILVNAAAG----NFLV--SAEDLSPNGFRT 117
              F+ DV     A+ ++E     F +   ++V+  AG     FL+  S +D     +  
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVS-CAGITQDEFLLHMSEDD-----WDK 118

Query: 118 VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAV 177
           V+ ++  GTF +   A + L        +   GSI+NIS+ +    +  Q + AA+KA V
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVS------NGCRGSIINISSIVGKVGNVGQTNYAASKAGV 172

Query: 178 DAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI 237
             +T+  A E G  + IR N + PG I  TP M +  P ++  K  + +P+  LG+  D+
Sbjct: 173 IGLTQTAARELGR-HGIRCNSVLPGFI-ATP-MTQKVPQKVVDKITEMIPMGHLGDPEDV 229

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLS 266
           A    +L S+   Y+ GT++ V GGL+++
Sbjct: 230 ADVVAFLASEDSGYITGTSVEVTGGLFMA 258

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  170 bits (433), Expect = 5e-52
 Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 20/254 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
           L  K  +      GIG + S +  K      ++  R +   A          +       
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 71  DV-RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           DV      +KK+++  F+    +DIL+N A    ++             + I+  G    
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAG---ILDDHQ-----IERTIAINFTGLVNT 114

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               L +  K    R    GG I NI +   + A       +A+KAAV + T +LA    
Sbjct: 115 TTAILDFWDK----RKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA- 169

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
               +    I PG    TP ++   +  ++  +  + +  +            +      
Sbjct: 170 PITGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA- 227

Query: 249 GKYVNGTTLIVDGG 262
               NG    +D G
Sbjct: 228 --NKNGAIWKLDLG 239

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  170 bits (433), Expect = 6e-52
 Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 27/263 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           + G+V ++TG   GIG  I+ Q  K GA+V I GR    L       +SLG + V    D
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62

Query: 72  VRRQEHAKKVVESTF-EHFGKLDILVNAAAGNFLVSAE-------DLSPNGFRTVMDIDS 123
             ++   + + E    E  G+LD+LVN A                +   + +  + ++  
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS--ATLHYTASWYQIHVAAAKAAVDAIT 181
            G +       + +         AG G I+ IS   +L Y    + +     KAA D + 
Sbjct: 123 RGHYFCSVYGARLMVP-------AGQGLIVVISSPGSLQYM---FNVPYGVGKAACDKLA 172

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK---ARDYMPLYKLGEK-WDI 237
            + A E    + +    + PG +  T  + +    E   +    + +   +   E     
Sbjct: 173 ADCAHEL-RRHGVSCVSLWPGIV-QTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELS 230

Query: 238 AMAALYLTSDTGK-YVNGTTLIV 259
               + L +D     ++G  L  
Sbjct: 231 GKCVVALATDPNILSLSGKVLPS 253

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  170 bits (434), Expect = 8e-52
 Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 22/258 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            + KVAL+TG G GIG EI+    K  + V  + R ++  D+ V  ++S G ++ G+ GD
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           V ++E   +V+         +DILVN  AG    N  +    ++     +  V+  +   
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVN-NAGITRDNLFLRMKNDE-----WEDVLRTNLNS 155

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
            F +     K +            G I+NIS+ +  T +  Q + +++KA V   T++LA
Sbjct: 156 LFYITQPISKRMIN-------NRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLA 208

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E  +  +I VN IAPG I  +  M     ++I       +P  ++G   ++A  A +L+
Sbjct: 209 KELAS-RNITVNAIAPGFI-SSD-MTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS 265

Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD   Y+NG   ++DGGL
Sbjct: 266 SDKSGYINGRVFVIDGGL 283

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  169 bits (431), Expect = 1e-51
 Identities = 84/261 (32%), Positives = 130/261 (49%), Gaps = 22/261 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  +VA++TG   GIG  I+ +  + GA V      +   +   +A +  G++  G   +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           V        +VEST + FG L++LVN  AG       +    ++     +  V+D +   
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVN-NAGITQDQLAMRMKDDE-----WDAVIDTNLKA 139

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
            F +    L+ + K       A GG I+NI++ +    +  Q++ AAAKA V  +TR LA
Sbjct: 140 VFRLSRAVLRPMMK-------ARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALA 192

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E G+   I VN +APG I DT  M K  P E  +  +  +PL +LG   DIA A  +L 
Sbjct: 193 REIGS-RGITVNCVAPGFI-DTD-MTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLA 249

Query: 246 SDTGKYVNGTTLIVDGGLWLS 266
           S    Y+ GTTL V+GG+++S
Sbjct: 250 SPQAGYITGTTLHVNGGMFMS 270

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  168 bits (429), Expect = 1e-51
 Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 36/264 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K  LITG   GIG      F K GA +      +  L  A        + A     D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE-----AVGAHPVVMD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           V      ++       H G+LD +V+  AG    NF      ED     +  V+ ++  G
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVH-YAGITRDNFHWKMPLED-----WELVLRVNLTG 111

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY----QIHVAAAKAAVDAIT 181
           +F +   A + +++          GSI+  ++       +     Q + AA+ A V  +T
Sbjct: 112 SFLVAKAASEAMRE-------KNPGSIVLTASR-----VYLGNLGQANYAASMAGVVGLT 159

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           R LALE G  + IRVN +APG I +T  M    P+++  KA    PL + G+  ++A AA
Sbjct: 160 RTLALELGR-WGIRVNTLAPGFI-ETR-MTAKVPEKVREKAIAATPLGRAGKPLEVAYAA 216

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWL 265
           L+L SD   ++ G  L VDGG  +
Sbjct: 217 LFLLSDESSFITGQVLFVDGGRTI 240

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  168 bits (429), Expect = 2e-51
 Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 23/259 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEG 70
           LKGK A++TG   G+G  I+ + G  GA++ + G      LDA     ++ GI  V  +G
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSV 124
           DV+  E  + +V++  + FG++DILVN  AG      ++  S +D     +  V++ +  
Sbjct: 63  DVKNPEDVENMVKTAMDAFGRIDILVN-NAGITRDTLMLKMSEKD-----WDDVLNTNLK 116

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
             +       K + K          G I+NI++      +  Q + AA+KA +   T+++
Sbjct: 117 SAYLCTKAVSKIMLK-------QKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSI 169

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A E+ A   I  N +APG I  T  M  + PD++     + +PL + G   ++A    +L
Sbjct: 170 AKEFAA-KGIYCNAVAPGII-KTD-MTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFL 226

Query: 245 TSDTGKYVNGTTLIVDGGL 263
            SD   Y+ G  + +DGGL
Sbjct: 227 ASDDSNYITGQVINIDGGL 245

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  170 bits (432), Expect = 2e-51
 Identities = 59/290 (20%), Positives = 105/290 (36%), Gaps = 40/290 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSL-GIKAVGFE 69
               VAL+TG    +G  I+      G +V +   R     +A  + L +     A+  +
Sbjct: 7   PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 66

Query: 70  GDV-----------------RRQEHAKKVVESTFEHFGKLDILVN--------------A 98
            D+                        ++V + + H+G+ D+LVN               
Sbjct: 67  ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126

Query: 99  AAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT 158
                 V   +        +   +++  + +       +    P +      SI+N+   
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG-TPAKHRGTNYSIINMVDA 185

Query: 159 LHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI 218
           +             AK A++ +TR+ ALE      IRVNG+ PG       M    P  +
Sbjct: 186 MTNQPLLGYTIYTMAKGALEGLTRSAALELAP-LQIRVNGVGPGLSVLVDDM----PPAV 240

Query: 219 NSKARDYMPLYK-LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
               R  +PLY+      +++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 241 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 290

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  171 bits (434), Expect = 2e-51
 Identities = 60/290 (20%), Positives = 106/290 (36%), Gaps = 40/290 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSL-GIKAVGFE 69
               VAL+TG    +G  I+      G +V +   R     +A  + L +     A+  +
Sbjct: 44  PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 103

Query: 70  GDV-----------------RRQEHAKKVVESTFEHFGKLDILVNAA------------- 99
            D+                        ++V + + H+G+ D+LVN A             
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163

Query: 100 -AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT 158
                 V   +        +   +++  + +       +    P +      SI+N+   
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG-TPAKHRGTNYSIINMVDA 222

Query: 159 LHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI 218
           +             AK A++ +TR+ ALE      IRVNG+ PG       M    P  +
Sbjct: 223 MTNQPLLGYTIYTMAKGALEGLTRSAALELAP-LQIRVNGVGPGLSVLVDDM----PPAV 277

Query: 219 NSKARDYMPLYK-LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
               R  +PLY+      +++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 278 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 327

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  167 bits (425), Expect = 5e-51
 Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 24/262 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L  KVAL+TG   GIGFE++      GA+V      +   +   ++++  G KA G   +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           +   E  +            +DILVN  AG    N ++  S ++     +++V++ +   
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVN-NAGITRDNLMMRMSEDE-----WQSVINTNLSS 116

Query: 126 TFTMCHEALKY-LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
            F M  E ++  +KK    R     G I++I + +    +  Q +  AAKA V   +++L
Sbjct: 117 IFRMSKECVRGMMKK----RW----GRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSL 168

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A E  +  +I VN +APG I  T  M     DE  S     +P  ++GE  DIA A  +L
Sbjct: 169 AYEVAS-RNITVNVVAPGFI-ATD-MTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFL 225

Query: 245 TSDTGKYVNGTTLIVDGGLWLS 266
            S+  KY+ G TL V+GG++++
Sbjct: 226 ASEEAKYITGQTLHVNGGMYMA 247

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  167 bits (424), Expect = 6e-51
 Identities = 38/253 (15%), Positives = 67/253 (26%), Gaps = 29/253 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            + +  L+ GG   +G      F      VA +   +    +A           V     
Sbjct: 5   GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS--------VIVKMTDS 56

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMC 130
              Q               K+D ++  A G    +A           +       +    
Sbjct: 57  FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 116

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
           H A K+LK          GG +    A      +   I    AK AV  + ++LA +   
Sbjct: 117 HLATKHLK---------EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSG 167

Query: 191 -DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
                    + P  + DTP   K  P+                    +        +   
Sbjct: 168 MPSGAAAIAVLPVTL-DTPMNRKSMPEA---------DFSSWTPLEFLVETFHDWITGNK 217

Query: 250 KYVNGTTLIVDGG 262
           +  +G+ + V   
Sbjct: 218 RPNSGSLIQVVTT 230

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  167 bits (425), Expect = 7e-51
 Identities = 42/236 (17%), Positives = 78/236 (33%), Gaps = 11/236 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +     + G G  IG EI+ +F   G +V    R  + L   V+ + + G + V    D
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
            R ++     + +  +    L++ +     N      + +   FR V ++     F    
Sbjct: 65  ARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR 123

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           E+ + +          G G I    AT            A+AK  + A+ +++A E    
Sbjct: 124 ESARLMLA-------HGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPK 176

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
                + I    + DT  + +         A        L     +A A   L   
Sbjct: 177 NIHVAHLIIDSGV-DTAWVRERREQMFGKDAL--ANPDLLMPPAAVAGAYWQLYQQ 229

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  166 bits (424), Expect = 8e-51
 Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 23/260 (8%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFE 69
           +   K AL+TG   GIG  I+ Q  + G +VA+     K+  +A V  +++ G+ +   +
Sbjct: 1   MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDS 123
            +V   +  K +++     FG LD+LVN  AG    N L+    ++     +  V+D + 
Sbjct: 61  ANVADADEVKAMIKEVVSQFGSLDVLVN-NAGITRDNLLMRMKEQE-----WDDVIDTNL 114

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRN 183
            G F    +A   + +          G+I+N+S+ +    +  Q +  A KA V  +T++
Sbjct: 115 KGVFNCIQKATPQMLR-------QRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKS 167

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
            A E  +   I VN +APG I  +  M     DE+  +    +PL + G+  DIA    +
Sbjct: 168 AARELAS-RGITVNAVAPGFI-VSD-MTDALSDELKEQMLTQIPLARFGQDTDIANTVAF 224

Query: 244 LTSDTGKYVNGTTLIVDGGL 263
           L SD  KY+ G T+ V+GG+
Sbjct: 225 LASDKAKYITGQTIHVNGGM 244

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  166 bits (424), Expect = 8e-51
 Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 23/260 (8%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFE 69
           +LKGKVAL+TG   GIG  I+    K GA+V +     +Q  +  V  ++ LG  A+   
Sbjct: 1   MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDS 123
            DV   E    +V+ T + FG++DILVN  AG    N L+    E+     + TV++ + 
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVN-NAGVTKDNLLMRMKEEE-----WDTVINTNL 114

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRN 183
            G F       +++ +          G I+NI++ +  T +  Q +  AAKA V  +T+ 
Sbjct: 115 KGVFLCTKAVSRFMMR-------QRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKT 167

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
            A E  +  +I VN IAPG I  T  M  +  + I ++    +P  + GE  DIA A  +
Sbjct: 168 SAKELAS-RNITVNAIAPGFI-ATD-MTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTF 224

Query: 244 LTSDTGKYVNGTTLIVDGGL 263
             SD  KY+ G TL VDGG+
Sbjct: 225 FASDQSKYITGQTLNVDGGM 244

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  166 bits (422), Expect = 2e-50
 Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 19/262 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEG 70
           LKGKVAL+TG   GIG  I+ +    GA VAI  G RK+  +  V  ++S G  A     
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64

Query: 71  DVRRQEHAKKVVESTFEHF------GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSV 124
           ++      + +  S            K DIL+N A        E+ +   F  ++ +++ 
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK 124

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
             F +  +AL  L+             I+NIS+     +    I  +  K A++ +T  L
Sbjct: 125 APFFIIQQALSRLRDNS---------RIINISSAATRISLPDFIAYSMTKGAINTMTFTL 175

Query: 185 ALEWGADYDIRVNGIAPGPIGDTP-GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           A + GA   I VN I PG +  T      L+   +   A       +LGE  DIA  A +
Sbjct: 176 AKQLGA-RGITVNAILPGFV-KTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF 233

Query: 244 LTSDTGKYVNGTTLIVDGGLWL 265
           L S   ++V G  + V GG  L
Sbjct: 234 LASPDSRWVTGQLIDVSGGSCL 255

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  165 bits (421), Expect = 3e-50
 Identities = 53/255 (20%), Positives = 92/255 (36%), Gaps = 16/255 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL--RSLGIKAVGFEGDV 72
            V  ITG  SGIG  +     + G +V  + R +  ++A +S    R   + AV      
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA--EDLSPNGFRTVMDIDSVGTFTMC 130
                              L + VN    + L+    E LS       + + S+      
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
              L  ++           G                 +  A +K AV  + R   ++W  
Sbjct: 122 AAELPMVEA-------MLAGDEARAIELAEQQGQ-THLAYAGSKYAVTCLARRNVVDWAG 173

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--RDYMPLYKLGEKWDIAMAALYLTSDT 248
              +R+N +APG + +TP +     D    ++  R   PL +  E  ++A A  +L    
Sbjct: 174 R-GVRLNVVAPGAV-ETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQ 231

Query: 249 GKYVNGTTLIVDGGL 263
             +++G+ L VDGG+
Sbjct: 232 ASFIHGSVLFVDGGM 246

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  163 bits (416), Expect = 1e-49
 Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 25/261 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L+GKV+L+TG   GIG  I+ +    G++V I G   +   A    +    G+KA G E 
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSV 124
           ++  +E   K  E  +     +DILVN  AG       +  S  D     +  V+ ++  
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVN-NAGITRDKLFLRMSLLD-----WEEVLKVNLT 118

Query: 125 GTFTMCHEALKY-LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRN 183
           GTF +   +L+  +K+    R     G I+NIS+ + +T +  Q++ +  KA +   T++
Sbjct: 119 GTFLVTQNSLRKMIKQ----RW----GRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKS 170

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           LA E     ++ VN +APG I +T  M  +  +EI  K ++ +PL + G   ++A   L+
Sbjct: 171 LAKELAP-RNVLVNAVAPGFI-ETD-MTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLF 227

Query: 244 LTSDTGKYVNGTTLIVDGGLW 264
           L S+   Y+ G  + V+GG++
Sbjct: 228 LCSELASYITGEVIHVNGGMF 248

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  163 bits (414), Expect = 3e-49
 Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 25/258 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TG   GIG  I+    + GA V      +    A       LG    G   +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY---LGDNGKGMALN 63

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           V   E  + V+++  + FG +DILVN  AG    N L+    E+     +  +M+ +   
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVN-NAGITRDNLLMRMKEEE-----WSDIMETNLTS 117

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
            F +    L+ + K          G I+N+ + +    +  Q + AAAKA V   T+++A
Sbjct: 118 IFRLSKAVLRGMMK-------KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMA 170

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E  +   + VN +APG I +T  M K   DE  +     +P  +LG+  +IA A  +L 
Sbjct: 171 REVAS-RGVTVNTVAPGFI-ETD-MTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA 227

Query: 246 SDTGKYVNGTTLIVDGGL 263
           S    Y+ G TL V+GG+
Sbjct: 228 SPEAAYITGETLHVNGGM 245

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  163 bits (415), Expect = 5e-49
 Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 15/258 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +G  A+++GG  G+G     +    G  V I     +   A       LG +A     +
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA--AGNFLVSAEDLSP---NGFRTVMDIDSVGT 126
           V  ++     +E+  +       +V          +   D SP    GF   +D+   GT
Sbjct: 85  VTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGT 144

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           + +       +    P   +   G+++  ++   Y     Q   AAAKA V  +T   A 
Sbjct: 145 YNVARLVAASIAAAEPR-ENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAAR 203

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWDIAMAALYLT 245
           +  +   IRVN IAPG +  TP + +   +E  +K    +P  K LG   + A AA +L 
Sbjct: 204 DL-SSAGIRVNTIAPGTM-KTP-IMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260

Query: 246 SDTGKYVNGTTLIVDGGL 263
           ++   Y+NG  + +DG  
Sbjct: 261 TNG--YINGEVMRLDGAQ 276

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  160 bits (408), Expect = 3e-48
 Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 27/259 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+ AL+TG   GIG  I+  F   GA V + G R+  L    +    LG     F  +
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSAN 81

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           +  ++  K++ E        +DILVN  AG       V    +D     +  V+ ++   
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVN-NAGITRDGLFVRMQDQD-----WDDVLAVNLTA 135

Query: 126 TFTMCHEALKY-LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
             T+  E +   +++    R     G I+NI++ +    +  Q +  AAKA +   ++ L
Sbjct: 136 ASTLTRELIHSMMRR----RY----GRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKAL 187

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A E  +  +I VN IAPG I  +  M     ++        +P+ ++G   +IA A +YL
Sbjct: 188 AQEIAS-RNITVNCIAPGFI-KSA-MTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYL 244

Query: 245 TSDTGKYVNGTTLIVDGGL 263
            SD   Y+ G TL ++GG+
Sbjct: 245 ASDEAAYLTGQTLHINGGM 263

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  158 bits (402), Expect = 3e-47
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 22/265 (8%)

Query: 9   ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVG 67
             +   +VA +TGG  G+G  IS +    G +VA+    R   +   +   R  G     
Sbjct: 20  GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA 79

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDI 121
           +  DV   E  ++  E     FGK+D+L+N  AG       +  +  D     +  VM  
Sbjct: 80  YAVDVADFESCERCAEKVLADFGKVDVLIN-NAGITRDATFMKMTKGD-----WDAVMRT 133

Query: 122 DSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAIT 181
           D    F +  + +  + +          G I+NI +      ++ Q + A+AKA +   T
Sbjct: 134 DLDAMFNVTKQFIAGMVE-------RRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFT 186

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           + LALE      I VN ++PG +  T  +  +  D + +K    +P+ +LG   ++A   
Sbjct: 187 KTLALETAK-RGITVNTVSPGYL-ATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALI 244

Query: 242 LYLTSDTGKYVNGTTLIVDGGLWLS 266
            +L SD   +V G  L ++GG+ +S
Sbjct: 245 AFLCSDDAGFVTGADLAINGGMHMS 269

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  158 bits (401), Expect = 3e-47
 Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 23/259 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           +  ++A +TGG  GIG  I  +  K G  V    G         +   ++LG      EG
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG 70

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSV 124
           +V   +  K+  +      G++D+LVN A G          + ED     ++ V+D +  
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNA-GITRDVVFRKMTRED-----WQAVIDTNLT 124

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
             F +  + +  + +        G G I+NIS+       + Q + + AKA +   T +L
Sbjct: 125 SLFNVTKQVIDGMVE-------RGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSL 177

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A E      + VN ++PG I  T  M K    ++  K    +P+ +LG   +I     +L
Sbjct: 178 AQEVAT-KGVTVNTVSPGYI-GTD-MVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWL 234

Query: 245 TSDTGKYVNGTTLIVDGGL 263
            S+   +  G    ++GGL
Sbjct: 235 ASEESGFSTGADFSLNGGL 253

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  156 bits (398), Expect = 5e-47
 Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 24/257 (9%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVR 73
            V ++TG   GIG  I+   GK G  V +   R  +  +     + + G +A+ F GDV 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVGTF 127
           ++   + ++++  + +G +D++VN  AG      L+           +  V+D++  G F
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVN-NAGITRDTLLIRMKKSQ-----WDEVIDLNLTGVF 115

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
                A K + K          G I+NI++ +    +  Q + AAAKA V   ++  A E
Sbjct: 116 LCTQAATKIMMK-------KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAARE 168

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL-TS 246
             +  +I VN + PG I  +  M     +++  K    +PL + G+  ++A    +L  S
Sbjct: 169 GAS-RNINVNVVCPGFI-ASD-MTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALS 225

Query: 247 DTGKYVNGTTLIVDGGL 263
               Y+ G    +DGG+
Sbjct: 226 PAASYITGQAFTIDGGI 242

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  157 bits (399), Expect = 9e-47
 Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 27/263 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L  ++AL+TG   GIG  I+ +    GA VA+         D  V+A+ + G +A   + 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSV 124
           DV ++   + +  +  E +G+LD+LVN  AG      L+    +D     +++V+D++  
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVN-NAGITRDTLLLRMKRDD-----WQSVLDLNLG 139

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
           G F     A K + K          G I+NI++ +    +  Q + +AAKA V  +T+ +
Sbjct: 140 GVFLCSRAAAKIMLK-------QRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTV 192

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A E  +   I VN +APG I  T   ++LA +++       +PL + GE  ++A    +L
Sbjct: 193 AKELAS-RGITVNAVAPGFI-ATDMTSELAAEKLLEV----IPLGRYGEAAEVAGVVRFL 246

Query: 245 TSDTG-KYVNGTTLIVDGGLWLS 266
            +D    Y+ G  + +DGGL ++
Sbjct: 247 AADPAAAYITGQVINIDGGLVMA 269

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  156 bits (397), Expect = 1e-46
 Identities = 48/255 (18%), Positives = 94/255 (36%), Gaps = 23/255 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGF 68
            +  +A+ITG   GIG  I+      G  V ++ R KQ L+     +        + +  
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+     A   ++   + +G +DILVN AA  F+  +     + FR +M+I+ +  + 
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVN-AAAMFMDGSLSEPVDNFRKIMEINVIAQYG 123

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +     + +K           G I N+++              + K A+  +  +L  E 
Sbjct: 124 ILKTVTEIMKV-------QKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYREL 176

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD- 247
            A   IRV  + PG + +T         ++  KA       ++ +  D+      L +  
Sbjct: 177 -APLGIRVTTLCPGWV-NT---------DMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLS 225

Query: 248 TGKYVNGTTLIVDGG 262
               +      +   
Sbjct: 226 ENVCIKDIVFEMKKS 240

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  155 bits (394), Expect = 3e-46
 Identities = 66/257 (25%), Positives = 110/257 (42%), Gaps = 14/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK +V ++TG  SG+G  ++    + GA+V  +  +    +   +    LG        D
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           V  +  A   +    + FG +  LVN A        L  +   + + F   + ++ +GTF
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF 121

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            M   A + + +G P  +    G I+N ++   +     Q   AA+K  V A+T   A E
Sbjct: 122 NMIRLAAEVMSQGEPD-ADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARE 180

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWDIAMAALYLTS 246
             A + IRV  IAPG   DTP M    P ++       +P    LG   + A    ++  
Sbjct: 181 L-ARFGIRVVTIAPGIF-DTP-MMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICE 237

Query: 247 DTGKYVNGTTLIVDGGL 263
           +T   +NG  + +DG L
Sbjct: 238 NT--MLNGEVIRLDGAL 252

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  154 bits (392), Expect = 5e-46
 Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 24/257 (9%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVG-FEGDV 72
           + ALITG   GIG  I+ +  + G ++AI  G+ ++  +      R  G   V     ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVGT 126
              E A  +V    E  G LD LVN A G      LV    ED     +  V++ +    
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNA-GITRDTLLVRMKDED-----WEAVLEANLSAV 115

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
           F    EA+K + K       A  G I+NI++ +    +  Q +  A+KA +   TR +A 
Sbjct: 116 FRTTREAVKLMMK-------ARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAK 168

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
           E+     I VN +APG I +T  M +  P E+       +P  + G   ++A A  +L S
Sbjct: 169 EYAQ-RGITVNAVAPGFI-ETE-MTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVS 225

Query: 247 DTGKYVNGTTLIVDGGL 263
           +   Y+ G TL VDGGL
Sbjct: 226 EKAGYITGQTLCVDGGL 242

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  153 bits (389), Expect = 1e-45
 Identities = 46/256 (17%), Positives = 80/256 (31%), Gaps = 34/256 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +     ++ GG   +G  I   F K+G +V  +         +   +           G+
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GN 50

Query: 72  VRRQEHAKKVVEST--FEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFT 128
               E  + ++E T       ++D +   A G    SA           ++      +  
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
               A  +LK          GG +    A      +   I    AKAAV  +T +LA + 
Sbjct: 111 AAKLATTHLK---------PGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKD 161

Query: 189 GA-DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
                +  V  I P  + DTP   K  P+                    I+   L  T++
Sbjct: 162 SGLPDNSAVLTIMPVTL-DTPMNRKWMPNA---------DHSSWTPLSFISEHLLKWTTE 211

Query: 248 T-GKYVNGTTLIVDGG 262
           T  +  +G  L +   
Sbjct: 212 TSSRPSSGALLKITTE 227

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  155 bits (393), Expect = 1e-45
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 11/209 (5%)

Query: 2   SLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL 61
            L   F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    L
Sbjct: 16  PLNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 75

Query: 62  G-IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
           G   A    G +     A++ V    +  G LD+L+     N  ++      +  R  M+
Sbjct: 76  GAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSME 135

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAI 180
           ++ +    +   AL  LK+          GSI+ +S+     A       +A+K A+D  
Sbjct: 136 VNFLSYVVLTVAALPMLKQ--------SNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 187

Query: 181 TRNLALEWGAD-YDIRVNGIAPGPIGDTP 208
             ++  E+     ++ +     G I DT 
Sbjct: 188 FSSIRKEYSVSRVNVSITLCVLGLI-DTE 215

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  153 bits (388), Expect = 2e-45
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 31/259 (11%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK +LITG  SGIG  I+    K G+ V I G  ++ L +  +A   L         +
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LKDNYTIEVCN 68

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           +  +E    ++         LDILV   AG       +    +D     F  V+DI+   
Sbjct: 69  LANKEECSNLISK----TSNLDILVC-NAGITSDTLAIRMKDQD-----FDKVIDINLKA 118

Query: 126 TFTMCHEALKY-LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
            F +  EA+K  ++K    R     G I+NIS+ +    +  Q +  A+KA +  +T++L
Sbjct: 119 NFILNREAIKKMIQK----RY----GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSL 170

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           + E      I VN +APG I  +  M     ++        +PL   G   D+A A  +L
Sbjct: 171 SYEVAT-RGITVNAVAPGFI-KSD-MTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFL 227

Query: 245 TSDTGKYVNGTTLIVDGGL 263
            S+   Y+ G TL V+GG+
Sbjct: 228 ASNNASYITGQTLHVNGGM 246

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  152 bits (386), Expect = 5e-45
 Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 24/252 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           ++ K  L+     GIG  ++    + GA V I  R +++L  +                D
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +      +K ++  FE   ++DILV  A G      ++L+   F+  +D   +    +  
Sbjct: 68  L------RKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 121

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             L  +K+        G G I+ I++    +         +A+ A+    + L+ E    
Sbjct: 122 NYLPAMKE-------KGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP- 173

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           Y I VN +APG   +T  + +L  +E   +    +P+ ++ +  +IA    +L S+   Y
Sbjct: 174 YGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASY 232

Query: 252 VNGTTLIVDGGL 263
           + G T++VDGGL
Sbjct: 233 LTGQTIVVDGGL 244

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  152 bits (386), Expect = 6e-45
 Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 16/259 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KG VA+ITGG SG+G   + +    GAS  ++       +A       LG   V    D
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPAD 66

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAED--LSPNGFRTVMDIDSVG 125
           V  ++  +  +      FG++D+ VN A    A       +    +   F+ V+D++ +G
Sbjct: 67  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
           TF +       + +  P       G I+N ++   +     Q   +A+K  +  +T  +A
Sbjct: 127 TFNVIRLVAGEMGQNEPD-QGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 185

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWDIAMAALYL 244
            +  A   IRV  IAPG    TP +    P+++ +     +P    LG+  + A     +
Sbjct: 186 RDL-APIGIRVMTIAPGLF-GTP-LLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAI 242

Query: 245 TSDTGKYVNGTTLIVDGGL 263
             +   ++NG  + +DG +
Sbjct: 243 IENP--FLNGEVIRLDGAI 259

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  150 bits (381), Expect = 2e-44
 Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 33/258 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              +  L+TGG  GIG  I+ +    G  VA+  R                    G E D
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-----------SGAPKGLFGVEVD 61

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           V   +   +   +  EH G +++LV+  AG     FL+  + E      F  V++ +  G
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVS-NAGLSADAFLMRMTEEK-----FEKVINANLTG 115

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
            F +   A + +++          G ++ I +         Q + AA+KA V  + R++A
Sbjct: 116 AFRVAQRASRSMQR-------NKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIA 168

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E     ++  N +APG I DT  M +   + I   A  ++P  ++G   ++A    +L 
Sbjct: 169 RELSK-ANVTANVVAPGYI-DTD-MTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA 225

Query: 246 SDTGKYVNGTTLIVDGGL 263
           S+   Y++G  + VDGG+
Sbjct: 226 SEDASYISGAVIPVDGGM 243

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  150 bits (381), Expect = 3e-44
 Identities = 53/266 (19%), Positives = 96/266 (36%), Gaps = 28/266 (10%)

Query: 9   ADILKGKVALITGGGSGIGFEISTQFGK---HGASVAIMGRRKQVLDAAVSALRSL--GI 63
           AD L   V ++TG   G G  ++ Q  +    G+ + +  R + +L      L +    +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 64  KAVGFEGDVRRQEHAKKVVESTFE----HFGKLDILVNAAAGNFLVSA---EDLSPNGFR 116
           K V    D+  +   ++++ +  E       +  +L+N AA    VS             
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 117 TVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAA 176
               ++      +    L   +            +++NIS+              A KAA
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSP-----GLSKTVVNISSLCALQPYKGWGLYCAGKAA 175

Query: 177 VDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-----EINSKARDYMPLYKL 231
            D + + LA E   +  +RV   APGP+ D   M +LA +     E+ SK +       L
Sbjct: 176 RDMLYQVLAAE---EPSVRVLSYAPGPL-DND-MQQLARETSKDPELRSKLQKLKSDGAL 230

Query: 232 GEKWDIAMAALYLTSDTGKYVNGTTL 257
            +    A   L L      + +G  +
Sbjct: 231 VDCGTSAQKLLGLLQK-DTFQSGAHV 255

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  149 bits (379), Expect = 4e-44
 Identities = 47/251 (18%), Positives = 86/251 (34%), Gaps = 26/251 (10%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRKQVLDAAVSALRSLGIKAVG 67
            + LITG G GIG  I+ +F +           + +  R    L+      R+ G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              D+      +++     E +G +D LVN A      +  DL+   F   M+ +  GTF
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +       +++          G I  I++     A  +      +K     +   + L 
Sbjct: 123 FLTQALFALMER-------QHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLY 175

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
                ++R+  + PG +  TP M     DE+ +               DIA   +     
Sbjct: 176 A-RKCNVRITDVQPGAV-YTP-MWGKVDDEMQALM---------MMPEDIAAPVVQAYLQ 223

Query: 248 TGKYVNGTTLI 258
             + V    ++
Sbjct: 224 PSRTVVEEIIL 234

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  149 bits (379), Expect = 6e-44
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 33/258 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              +  L+TGG  GIG  I+  F   G  VAI  R  +  +             +  + D
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSVG 125
           +   E  ++  +   E  G +++L+   AG      L+  S ED     F +V++ +  G
Sbjct: 68  ITDTEQVEQAYKEIEETHGPVEVLIA-NAGVTKDQLLMRMSEED-----FTSVVETNLTG 121

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
           TF +   A + + +       A  G ++ IS+ +    S  Q + AA+KA +    R+LA
Sbjct: 122 TFRVVKRANRAMLR-------AKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLA 174

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E G+  +I  N +APG + DT  M K+  DE  +     +PL +     +IA    +L 
Sbjct: 175 RELGS-RNITFNVVAPGFV-DTD-MTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLA 231

Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD   Y+ G  + VDGGL
Sbjct: 232 SDDASYITGAVIPVDGGL 249

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  143 bits (364), Expect = 8e-42
 Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 18/258 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           ++  VA++TGG SG+G   + +    GA V ++  R + + A       LG +A     D
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVAD------LGDRARFAAAD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
           V  +      ++   E  G L I+VN A    A   L      S   FR ++DI+ VG+F
Sbjct: 61  VTDEAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119

Query: 128 TMCHEALKYLKKGGPGRSSAGG-GSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
            +   A + + K  P   +A   G I+N ++   +     Q   +A+K  V  +T  +A 
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWDIAMAALYLT 245
           +  A + IRV  IAPG   DTP +    P+E  +     +P    LG   +    A+++ 
Sbjct: 180 DL-ASHRIRVMTIAPGLF-DTP-LLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHII 236

Query: 246 SDTGKYVNGTTLIVDGGL 263
            +    +NG  + +DG +
Sbjct: 237 ENP--MLNGEVIRLDGAI 252

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  143 bits (362), Expect = 2e-41
 Identities = 50/272 (18%), Positives = 91/272 (33%), Gaps = 48/272 (17%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
            + +I+G  +GIG          G  +  +  R   + A +S                ++
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLST-----------AEGRKQ 50

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
                 + +   +    +D LV  A    L     +       V+ ++  G   +    L
Sbjct: 51  A-----IADVLAKCSKGMDGLVLCAG---LGPQTKV----LGNVVSVNYFGATELMDAFL 98

Query: 135 KYLKKGGPGR---------------------SSAGGGSILNISATLHYTASWYQIHVAAA 173
             LKKG                         +   G      +   H       +  A +
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--RDYMPLYKL 231
           K A+    R  A  WG    +R+N IAPG   +TP +     D    ++  +   P+ + 
Sbjct: 159 KNALTVAVRKRAAAWGEA-GVRLNTIAPGAT-ETPLLQAGLQDPRYGESIAKFVPPMGRR 216

Query: 232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            E  ++A    +L S    YV+G  +++DGG+
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  140 bits (355), Expect = 6e-40
 Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 11/236 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             G+ A++TGG SGIG   +T+F + GA + +    +  L+ AV+ LR  G  A G   D
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR  +   ++ +  F   G +D++ + A          ++ + +R V+DID  G+     
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE 148

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             L  L + G       GG I   ++      +        AK  V  +   LA E    
Sbjct: 149 AFLPRLLEQG------TGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREV-KP 201

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
             I V+ + P  + +T     ++  E    A   M     G    +      +++D
Sbjct: 202 NGIGVSVLCPMVV-ETKL---VSNSERIRGADYGMSATPEGAFGPLPTQDESVSAD 253

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  136 bits (346), Expect = 3e-39
 Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 28/218 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
                 LITG   GIG   +      G  V +M R ++ L A  + L      A+   GD
Sbjct: 3   GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGD 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           VR +    + V +  E FG+L  LVN A    +    +L+   +R V+D +  G F    
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATL-HYT---ASWYQIHVAAAKAAVDAITRNLALE 187
            A+  L +        GGG+I+N+ +          + Y     A+K  +  +     L+
Sbjct: 119 HAVPALLR-------RGGGTIVNVGSLAGKNPFKGGAAY----NASKFGLLGLAGAAMLD 167

Query: 188 WGADYDIRVNGIAPGPIGDTP-------GMNKLAPDEI 218
              + ++RV  + PG + DT           KL P+++
Sbjct: 168 L-REANVRVVNVLPGSV-DTGFAGNTPGQAWKLKPEDV 203

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  135 bits (343), Expect = 7e-39
 Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 24/254 (9%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           + AL+TGG SG+G   +      G  V +       LD     LR  G   +  EGDV R
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVV-------LD-----LRREGEDLIYVEGDVTR 50

Query: 75  QEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +E  ++ V    E    L  +V+AA    A   L          FR V++++ +GTF + 
Sbjct: 51  EEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A   +++  P  +    G I+N ++   +     Q   AA+K  V A+T   A E  A
Sbjct: 110 RLAAWAMRENPPD-AEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAAREL-A 167

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWDIAMAALYLTSDTG 249
            + IRV  +APG   DTP +  L P++  +     +P    LG   + A   L++  +  
Sbjct: 168 GWGIRVVTVAPGLF-DTPLLQGL-PEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP- 224

Query: 250 KYVNGTTLIVDGGL 263
             +NG  + +DG L
Sbjct: 225 -MLNGEVVRLDGAL 237

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  134 bits (340), Expect = 2e-38
 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 19/199 (9%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEGDV 72
            KVA+ITG   GIG  I+    + G ++A+  R    L+     L +  G++      DV
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHE 132
            + E  ++  +   E FG +D++V  A   +    E+LS   F  +++++ +G +     
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKA 121

Query: 133 ALKYLKKGGPGRSSAGGGSILNISATLHYT---ASWYQIHVAAAKAAVDAITRNLALEWG 189
            L  LK+        GG +++  S            Y     + K A  A+ R   +E  
Sbjct: 122 FLDSLKR-------TGGLALVTTSDVSARLIPYGGGY----VSTKWAARALVRTFQIE-- 168

Query: 190 ADYDIRVNGIAPGPIGDTP 208
            + D+R   + PG + DT 
Sbjct: 169 -NPDVRFFELRPGAV-DTY 185

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  137 bits (346), Expect = 2e-38
 Identities = 68/281 (24%), Positives = 110/281 (39%), Gaps = 20/281 (7%)

Query: 4   ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASV-------AIMGRRKQVLDAA-- 54
           + P    ++ G+V ++TG G GIG   +  F   GA V        + G       AA  
Sbjct: 17  QGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS 76

Query: 55  -VSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPN 113
            V  + + G +AV    +V   + A  ++++  E FG LD+LVN A         + S  
Sbjct: 77  VVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEE 136

Query: 114 GFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA 173
            F  V+ +   G F     A  Y +        A  G I+N S+      S  Q + +AA
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWRGLSKA-GKAVDGRIINTSSGAGLQGSVGQGNYSAA 195

Query: 174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGE 233
           KA +  +T   A E    Y + VN IAP     T     +  + + ++       +    
Sbjct: 196 KAGIATLTLVGAAE-MGRYGVTVNAIAPS--ARTRMTETVFAEMMATQD----QDFDAMA 248

Query: 234 KWDIAMAALYLTSDTGKYVNGTTLIVDGGL--WLSRPRHLP 272
             +++   ++L S   + V G    V+GG         H P
Sbjct: 249 PENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGP 289

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  133 bits (337), Expect = 2e-38
 Identities = 41/246 (16%), Positives = 75/246 (30%), Gaps = 47/246 (19%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
               L+ G    +G  +  +  K  A V   GR                  +     D+ 
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITAGRH-----------------SGDVTVDIT 44

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             +     ++  +E  GK+D +V+A          +L+P      +     G   +    
Sbjct: 45  NIDS----IKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           +  L            GS    +  +           A A  AV A  ++ A+E      
Sbjct: 101 IDSLND---------KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMP--RG 149

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN 253
           IR+N ++P  + +    +KL P         +   +       +A A  +  S  G    
Sbjct: 150 IRINTVSPNVL-EES-WDKLEP---------FFEGFLPVPAAKVARA--FEKSVFG-AQT 195

Query: 254 GTTLIV 259
           G +  V
Sbjct: 196 GESYQV 201

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  134 bits (340), Expect = 1e-37
 Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 5/199 (2%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
             G+ A +TGG +G+G  +  Q    G  VAI   R+  +D A++ L +   G + +G +
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            DV  +E  K   +     FG + IL N A  N     E+ S + +  ++ ++  G    
Sbjct: 66  LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNG 125

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               +  + +         GG ++N ++   + A+         K AV  ++ +L     
Sbjct: 126 VTTFVPRMVERVKA-GEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL- 183

Query: 190 ADYDIRVNGIAPGPIGDTP 208
             Y+I V+ + PG +  + 
Sbjct: 184 LKYEIGVSVLCPGLV-KSY 201

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  132 bits (335), Expect = 1e-37
 Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 37/275 (13%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K+A++TG   G+G EI     +     A+ GR  + L A               E D
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL-GRNPEHLAALAEI-----EGVEPIESD 56

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           + ++   +  V+   ++   +D LV+AAA     + E  S   +   +D++ +    +  
Sbjct: 57  IVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSR 115

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           + L  L+        A  G ++ I++             AA+K A+  +      E  A+
Sbjct: 116 QLLPALR--------AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEE-AN 166

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             IRV+ ++PGP  +TP M +   D   +  R  + +    +  +IA A  ++    G+ 
Sbjct: 167 NGIRVSTVSPGPT-NTP-MLQGLMDSQGTNFRPEIYI--EPK--EIANAIRFVID-AGET 219

Query: 252 VNGTTLIVDGGLWLSRPRHLPKDAVKQLSRTVEKR 286
              T + V       RPR        +L+   E  
Sbjct: 220 TQITNVDV-------RPR-------IELADRKEGH 240

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  136 bits (344), Expect = 4e-37
 Identities = 66/261 (25%), Positives = 101/261 (38%), Gaps = 26/261 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA++TG   GIG  I+  F + GA+V  +       D    A     +       D
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVA---DKVGGTALTLD 267

Query: 72  VRRQEHAKKVVESTFEHFG-KLDILVNAAAG----NFLV--SAEDLSPNGFRTVMDIDSV 124
           V   +   K+     EH G K+DILVN  AG      L     +      +  V+ ++ +
Sbjct: 268 VTADDAVDKITAHVTEHHGGKVDILVN-NAGITRDKLLANMDEKR-----WDAVIAVNLL 321

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
               +    +              GG ++ +S+      +  Q + A  KA +  +   L
Sbjct: 322 APQRLTEGLVGNGTI-------GEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEAL 374

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
           A    AD  I +N +APG I +T  M +  P       R    L++ G+  D+A    Y 
Sbjct: 375 APVL-ADKGITINAVAPGFI-ETK-MTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYF 431

Query: 245 TSDTGKYVNGTTLIVDGGLWL 265
            S     V G T+ V G   L
Sbjct: 432 ASPASNAVTGNTIRVCGQAML 452

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  129 bits (326), Expect = 1e-35
 Identities = 60/267 (22%), Positives = 104/267 (38%), Gaps = 47/267 (17%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI---------MGRRKQVLDAAVSALRSLG 62
             G+V L+TG G G+G   +  F + GA V +         +G+     D  V  +R  G
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
            KAV     V   E  +K+V++  + FG++D++VN A      S   +S   +  +  + 
Sbjct: 67  GKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVH 123

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
             G+F +   A  ++KK          G I+  ++      ++ Q + +AAK  +  +  
Sbjct: 124 LRGSFQVTRAAWDHMKK-------QNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN 176

Query: 183 NLALEWGADYDIRVNGIAPG-------PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW 235
            L +E G   +I  N IAP         +     +  L P+                   
Sbjct: 177 TLVIE-GRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPE------------------- 216

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGG 262
            +A   L+L  ++    NG    V  G
Sbjct: 217 YVAPLVLWLCHESC-EENGGLFEVGAG 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  132 bits (335), Expect = 3e-35
 Identities = 71/274 (25%), Positives = 113/274 (41%), Gaps = 48/274 (17%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI---------MGRRKQVLDAAVSALRSLG 62
            K KV +ITG G G+G   S +F K GA V +          G   +  D  V  +   G
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
             AV    +V       K+VE+  ++FG + +++N A      S + ++   ++ V+D+ 
Sbjct: 66  GVAVADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVH 122

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
             G F +   A  Y +K          G I+N S+      ++ Q + A+AK+A+     
Sbjct: 123 LNGAFAVTKAAWPYFQK-------QKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAE 175

Query: 183 NLALEWGADYDIRVNGIAPG-------PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW 235
            LA E GA Y+I+ N IAP         I   P + KL P+                   
Sbjct: 176 TLAKE-GAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPE------------------- 215

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPR 269
            +A   LYL+S     + G    V  G + ++ R
Sbjct: 216 KVAPLVLYLSSAEN-ELTGQFFEVAAG-FYAQIR 247

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  117 bits (294), Expect = 1e-29
 Identities = 68/268 (25%), Positives = 123/268 (45%), Gaps = 30/268 (11%)

Query: 5   SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLG 62
           S      LK KV LITG G+G+G E +  F K+GA V +       +     V  +++ G
Sbjct: 313 SGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKT----VDEIKAAG 368

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
            +A   + DV   + ++ ++++  + +G +DILVN A      S   +S   + +V  + 
Sbjct: 369 GEAWPDQHDV--AKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVH 426

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
            +GTF +   A  Y  +          G I+NI++T     ++ Q + +++KA +  +++
Sbjct: 427 LIGTFNLSRLAWPYFVE-------KQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSK 479

Query: 183 NLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
            +A+E GA  +I+VN +AP    +T     +  ++             L     +A   +
Sbjct: 480 TMAIE-GAKNNIKVNIVAPH--AETAMTLSIMREQ----------DKNLYHADQVAPLLV 526

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLSRPRH 270
           YL +D    V G T  + GG W+   R 
Sbjct: 527 YLGTDDV-PVTGETFEIGGG-WIGNTRW 552

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  126 bits (319), Expect = 6e-35
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 12/250 (4%)

Query: 2   SLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL 61
              +    +  + ++AL+TG   GIG  ++    + G  V    R    ++   +  +S 
Sbjct: 20  GHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA 79

Query: 62  G--IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVM 119
           G     + +  D+  +E    +  +       +DI +N A      +    S +G++ + 
Sbjct: 80  GYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMF 139

Query: 120 DIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL-HYTASWYQIHV-AAAKAAV 177
           +++ +       EA + +K+          G I+NI++   H        H  +A K AV
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDD-----GHIININSMSGHRVLPLSVTHFYSATKYAV 194

Query: 178 DAITRNLALEW-GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD 236
            A+T  L  E   A   IR   I+PG + +T    KL   +    A  Y  +  L  + D
Sbjct: 195 TALTEGLRQELREAQTHIRATCISPGVV-ETQFAFKLHDKDPEKAAATYEQMKCLKPE-D 252

Query: 237 IAMAALYLTS 246
           +A A +Y+ S
Sbjct: 253 VAEAVIYVLS 262

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  125 bits (316), Expect = 9e-35
 Identities = 64/195 (32%), Positives = 88/195 (45%), Gaps = 17/195 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVALITG  SGIG   +      GA+VAI  RR + L A    L + G K    E D
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  ++     V ST E  G LDILVN A    L   ED     +  ++D + +G   M  
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATL-HYT---ASWYQIHVAAAKAAVDAITRNLALE 187
            AL +L +          G+++ +S+         A+ Y     A K  V+A +  L  E
Sbjct: 125 AALPHLLR--------SKGTVVQMSSIAGRVNVRNAAVY----QATKFGVNAFSETLRQE 172

Query: 188 WGADYDIRVNGIAPG 202
              +  +RV  I PG
Sbjct: 173 V-TERGVRVVVIEPG 186

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  123 bits (310), Expect = 1e-33
 Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 18/203 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           + G++ LITG G GIG   + +F K  + + +    K  L+   +  + LG K   F  D
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA----AGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              +E      +      G + ILVN A      +                 +++ +  F
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF----ATQDPQIEKTFEVNVLAHF 144

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
                 L  + K          G I+ +++   + +  + +   ++K A     + L  E
Sbjct: 145 WTTKAFLPAMTK-------NNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDE 197

Query: 188 WGADY--DIRVNGIAPGPIGDTP 208
             A     ++   + P  + +T 
Sbjct: 198 LAALQITGVKTTCLCPNFV-NTG 219

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  122 bits (309), Expect = 1e-33
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 18/196 (9%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG 70
           ++  KV LITG   GIG  I+ + G  GA + +  RR+  ++A  + +R  G  A+    
Sbjct: 1   MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL 60

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +       ++  + +G++D+LVN A    L     +  + +  ++D++  G     
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATL-HYT---ASWYQIHVAAAKAAVDAITRNLAL 186
              L  ++           G I+NI +         A+ Y     A K AV AI+  L  
Sbjct: 121 GAVLPIMEAQ-------RSGQIINIGSIGALSVVPTAAVY----CATKFAVRAISDGLRQ 169

Query: 187 EWGADYDIRVNGIAPG 202
           E     +IRV  + PG
Sbjct: 170 E---STNIRVTCVNPG 182

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  122 bits (309), Expect = 1e-31
 Identities = 68/274 (24%), Positives = 109/274 (39%), Gaps = 48/274 (17%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI---------MGRRKQVLDAAVSALRSLG 62
             G+VA++TG G+G+G E +  F + GA V +          G  ++  D  V  +R  G
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 122
            +AV     V       KV+E+  + FG++DILVN A      S    S   +  V D+ 
Sbjct: 77  GEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH 133

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITR 182
             G+F     A  Y+KK          G I+  S+      ++ Q++  AAK  +  +  
Sbjct: 134 LKGSFKCTQAAFPYMKK-------QNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLAN 186

Query: 183 NLALEWGADYDIRVNGIAPG-------PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW 235
            +A+E GA  ++  N I P         I      N+L P                    
Sbjct: 187 TVAIE-GARNNVLCNVIVPTAASRMTEGILPDILFNELKPK------------------- 226

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPR 269
            IA    YL  ++ +  NG+ +    G W ++  
Sbjct: 227 LIAPVVAYLCHESCE-DNGSYIESAAG-WATKLH 258

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  114 bits (288), Expect = 2e-30
 Identities = 47/204 (23%), Positives = 75/204 (36%), Gaps = 17/204 (8%)

Query: 4   ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI 63
                          ITG  SG G   + +F + G S+ + GRR++ L A    L +   
Sbjct: 11  SGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-KT 69

Query: 64  KAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAG-NFLVSAEDLSPNGFRTVMDID 122
           + +    DVR +      V++  E F  L  L+N A        A+    + + T++D +
Sbjct: 70  RVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTN 129

Query: 123 SVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS---ATLHY-TASWYQIHVAAAKAAVD 178
             G        L  L   G       G SI+N+        Y  +  Y       KA V+
Sbjct: 130 IKGLLYSTRLLLPRLIAHG------AGASIVNLGSVAGKWPYPGSHVY----GGTKAFVE 179

Query: 179 AITRNLALEWGADYDIRVNGIAPG 202
             + NL  +      +RV  + PG
Sbjct: 180 QFSLNLRCDL-QGTGVRVTNLEPG 202

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  111 bits (280), Expect = 2e-29
 Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 20/197 (10%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ 75
           + L+TG  +G G  I+ +F + G  V   GRR++ L         LG      + DVR +
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGDNLYIAQLDVRNR 58

Query: 76  EHAKKVVESTFEHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
              ++++ S    +  +DILVN A     +  A   S   + T++D ++ G   M    L
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 135 KYLKKGGPGRSSAGGGSILNISATL-HYT---ASWYQIHVAAAKAAVDAITRNLALEWGA 190
             + +          G I+NI +T   +     + Y     A KA V   + NL  +   
Sbjct: 119 PGMVE-------RNHGHIINIGSTAGSWPYAGGNVY----GATKAFVRQFSLNLRTDL-H 166

Query: 191 DYDIRVNGIAPGPIGDT 207
              +RV  I PG +G T
Sbjct: 167 GTAVRVTDIEPGLVGGT 183

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  111 bits (280), Expect = 2e-29
 Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 30/243 (12%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              K+ +ITG  SGIG  I+ +F + G  + ++ RR + L A            +  + D
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP------NTLCAQVD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +      +    + +G  D +VN A    L   +    N ++ + D++ +G      
Sbjct: 68  VTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQ 127

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATL-HYT---ASWYQIHVAAAKAAVDAITRNLALE 187
             L  +K           G+I+NIS+     T    + Y       K AV AI+ N+  E
Sbjct: 128 AVLAPMKA-------RNCGTIINISSIAGKKTFPDHAAY----CGTKFAVHAISENVREE 176

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW----DIAMAALY 243
             A  ++RV  IAP  +  T  ++     +I      +              D+A A L+
Sbjct: 177 V-AASNVRVMTIAPSAV-KTELLSHTTSQQIKDGYDAW---RVDMGGVLAADDVARAVLF 231

Query: 244 LTS 246
              
Sbjct: 232 AYQ 234

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  111 bits (280), Expect = 4e-29
 Identities = 50/212 (23%), Positives = 79/212 (37%), Gaps = 23/212 (10%)

Query: 1   MSLESPFKADILKGKVALITGGGSGIGFEISTQF---GKHGASVAIMGRRKQVLDAAVSA 57
           MS      A+ L  K  LITG  +GIG   + ++         + +  RR + L+     
Sbjct: 21  MSQGRK-AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT 79

Query: 58  LRS--LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNF-LVSAEDLSPNG 114
           +       K    + D+ + E  K  +E+  + F  +DILVN A           ++   
Sbjct: 80  IDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED 139

Query: 115 FRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL-HYT---ASWYQIHV 170
            + V D +      +    L   +           G I+N+ +          S Y    
Sbjct: 140 IQDVFDTNVTALINITQAVLPIFQA-------KNSGDIVNLGSIAGRDAYPTGSIY---- 188

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPG 202
            A+K AV A T +L  E   +  IRV  IAPG
Sbjct: 189 CASKFAVGAFTDSLRKEL-INTKIRVILIAPG 219

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  108 bits (273), Expect = 1e-28
 Identities = 33/214 (15%), Positives = 82/214 (38%), Gaps = 26/214 (12%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVR 73
            + +ITG  SG+G E++  +   G +  + GR +  L    + L + +G +A     D+ 
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRAR----DLA 57

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             +  +++ E           +V++A   +    ++  P   +T+++ +      +  E 
Sbjct: 58  SHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           +K  K            +++ I +T        +    A K AV  +  ++ LE      
Sbjct: 115 VKRYK--------DQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLEL-KGKP 165

Query: 194 IRVNGIAPGPI---------GDTPGMNKLAPDEI 218
           +++  + PG +               + ++ ++ 
Sbjct: 166 MKIIAVYPGGMATEFWETSGKSLDTSSFMSAEDA 199

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  105 bits (264), Expect = 2e-27
 Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 24/192 (12%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
            LITG   G+G   +      G  + + GRR   L      +      A     D+  + 
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVG-----ARALPADLADEL 55

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
                 ++  E  G LD+LV+A       S  +   +    ++    +         LK+
Sbjct: 56  ----EAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA----FVLKH 107

Query: 137 LKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRV 196
            +          G   +   A   Y         AAAK A++A       E      + +
Sbjct: 108 ARF-------QKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKEL-LREGVHL 159

Query: 197 NGIAPGPIGDTP 208
             +    +  T 
Sbjct: 160 VLVRLPAV-ATG 170

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score =  106 bits (266), Expect = 2e-27
 Identities = 76/288 (26%), Positives = 109/288 (37%), Gaps = 56/288 (19%)

Query: 1   MSLESPFKADILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGRR--KQVLDAA 54
           M+         L GK  L+TG  S   I + I+    + GA +A   +G R   ++ + A
Sbjct: 1   MAHHHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFA 60

Query: 55  VSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVS 106
                  G + V F  DV        +  S   H+  LD LV++          G+FL  
Sbjct: 61  ----AEFGSELV-FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFL-- 113

Query: 107 AEDLSPNGFRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS- 164
            + L+   FR   DI S  +F  +   AL  L             S+L    TL Y  + 
Sbjct: 114 -DGLTRENFRIAHDI-SAYSFPALAKAALPMLSDDA---------SLL----TLSYLGAE 158

Query: 165 ----WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----- 215
                Y   +  AKAA++A  R LA+  GA   +RVN I+ GPI        LA      
Sbjct: 159 RAIPNYNT-MGLAKAALEASVRYLAVSLGAK-GVRVNAISAGPI------KTLAASGIKS 210

Query: 216 -DEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             +I        PL +      +  A  +L SD    V    + VD G
Sbjct: 211 FGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSG 258

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score =  105 bits (265), Expect = 4e-27
 Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 49/274 (17%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF 68
            L GK AL+ G  +   +GF I+ +  + GA VA+  + +++   A     +LG   + F
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALL-F 63

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRTVMD 120
             DV + E    +     E FG LD LV+A A        G ++    D     +   ++
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI----DTRRQDWLLALE 119

Query: 121 IDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHVAAAK 174
           + S  +   +   A   L++GG          I+    TL Y AS      Y + +A AK
Sbjct: 120 V-SAYSLVAVARRAEPLLREGG---------GIV----TLTYYASEKVVPKYNV-MAIAK 164

Query: 175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARDYMPL 228
           AA++A  R LA E G    +RVN I+ GP+        +A        ++  +     PL
Sbjct: 165 AALEASVRYLAYELGPK-GVRVNAISAGPV------RTVAARSIPGFTKMYDRVAQTAPL 217

Query: 229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            +   + ++    L+L S     + G  + VD G
Sbjct: 218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score =  105 bits (263), Expect = 1e-26
 Identities = 69/298 (23%), Positives = 112/298 (37%), Gaps = 64/298 (21%)

Query: 12  LKGKVALITGGGS--GIGFEISTQFGKHGASVAI-------------MGRRKQVLDAAVS 56
           L+GK A I G     G G+ ++      GA + +             + R K      + 
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 57  ALRSLGIKAVG-----------FEGDVRRQ--------EHAKKVVESTFEHFGKLDILVN 97
               + IK V               DV+             ++  E   + FG +DILV+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 98  AAA------GNFLVSAEDLSPNGFRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGG 150
           + A         L    + S  G+   +   S  +F  +    L  +  GG         
Sbjct: 126 SLANGPEVSKPLL----ETSRKGYLAAISA-SSYSFVSLLSHFLPIMNPGG--------- 171

Query: 151 SILNISATLHYTAS-----WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG 205
           + +    +L Y AS      Y   +++AKAA+++ TR LA E G   +IRVN I+ GP+G
Sbjct: 172 ASI----SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG 227

Query: 206 DTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
                     D +   + +  P+ K     ++  AA +L S     + G T+ VD GL
Sbjct: 228 SRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score =  104 bits (262), Expect = 1e-26
 Identities = 66/277 (23%), Positives = 106/277 (38%), Gaps = 54/277 (19%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGR-RKQVLDAAVSALRSLGIKA 65
            L GK  LITG  S   I + I+    + GA +A   +G+ + +V              A
Sbjct: 23  FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLC----AEFNPAA 78

Query: 66  VGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFRT 117
           V    DV   +  K +     + +  LD +V++ A        GNF+   + ++  GF  
Sbjct: 79  V-LPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFI---DCVTREGFSI 134

Query: 118 VMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHVA 171
             DI S  +F  +  E    +K            S++     L Y  +      Y   + 
Sbjct: 135 AHDI-SAYSFAALAKEGRSMMKNRN--------ASMV----ALTYIGAEKAMPSYNT-MG 180

Query: 172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARDY 225
            AKA+++A  R  AL  G D  I+VN ++ GPI        LA        ++       
Sbjct: 181 VAKASLEATVRYTALALGED-GIKVNAVSAGPI------KTLAASGISNFKKMLDYNAMV 233

Query: 226 MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            PL K  +  ++     +L SD    + G  + VD G
Sbjct: 234 SPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG 270

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score =  104 bits (262), Expect = 1e-26
 Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 57/278 (20%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGRR--KQVLDAAVSALRSLGIK 64
            LKGK  LI G  +   I + I+      GA++A   +     K+V   A    + L   
Sbjct: 3   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIA----QELNSP 58

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFR 116
            V +E DV ++EH K +  S  +  G LD +V++ A        G+ L    + S + F 
Sbjct: 59  YV-YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL----ETSKSAFN 113

Query: 117 TVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHV 170
           T M+I SV +   + +     L  G          S+L    TL Y  S      Y + +
Sbjct: 114 TAMEI-SVYSLIELTNTLKPLLNNGA---------SVL----TLSYLGSTKYMAHYNV-M 158

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARD 224
             AKAA+++  R LA++ G    IRVN ++ GPI        LA         I      
Sbjct: 159 GLAKAALESAVRYLAVDLGKH-HIRVNALSAGPI------RTLASSGIADFRMILKWNEI 211

Query: 225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             PL K     ++  A +YL S     V+G    VD G
Sbjct: 212 NAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  105 bits (263), Expect = 2e-26
 Identities = 59/242 (24%), Positives = 97/242 (40%), Gaps = 25/242 (10%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVA-----IMGRRKQVLDAAVSALRSLGIKAVG 67
             K+ LITG  SG G   +      G  V      I+GR    ++A     R   +    
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
            E DV+ Q    + ++      G++D+L++ A       AE  +P  F  + DI+ + T 
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQ 123

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNIS--ATLHYTA---SWYQIHVAAAKAAVDAITR 182
            +   AL ++++          G ++ IS  ++   T    + Y     AAKAA+DAI  
Sbjct: 124 RVNRAALPHMRR-------QKHGLLIWISSSSSAGGTPPYLAPY----FAAKAAMDAIAV 172

Query: 183 NLALEWGADYDIRVNGIAPGPIG---DTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAM 239
             A E  + + I  + I PG      +    + +  D       +  P   LGE+   A 
Sbjct: 173 QYAREL-SRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAF 231

Query: 240 AA 241
           AA
Sbjct: 232 AA 233

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score =  103 bits (260), Expect = 2e-26
 Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 59/280 (21%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI------MGRRKQVLDAAVSALRSLG 62
            L+ K  +I G  +   I F ++    + GA +          +  + L   ++   +  
Sbjct: 29  NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHL 88

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNG 114
                ++ DV+  E      E   +  G +D + ++ A        G F     + S  G
Sbjct: 89  -----YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFS----ETSREG 139

Query: 115 FRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQI 168
           F    DI S  + T + HEA K + +GG         SI+       Y         Y +
Sbjct: 140 FLLAQDI-SSYSLTIVAHEAKKLMPEGG---------SIV----ATTYLGGEFAVQNYNV 185

Query: 169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKA 222
            +  AKA+++A  + LAL+ G D +IRVN I+ GPI        L+       + I  + 
Sbjct: 186 -MGVAKASLEANVKYLALDLGPD-NIRVNAISAGPI------RTLSAKGVGGFNTILKEI 237

Query: 223 RDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            +  PL +  ++ ++   A YL SD    V G  + VD G
Sbjct: 238 EERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 277

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score =  103 bits (259), Expect = 2e-26
 Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 59/280 (21%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI------MGRRKQVLDAAVSALRSLG 62
            L+G+  ++ G  +   I + I+    + GA +        + +    L   +    S+ 
Sbjct: 4   SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSII 63

Query: 63  IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNG 114
                   DV      +    S  E  G +  + +  A        G +L    + + +G
Sbjct: 64  -----LPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYL----NTNRDG 114

Query: 115 FRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQI 168
           F    +I S  + T +   A   + +GG         SI+    TL Y         Y +
Sbjct: 115 FLLAHNI-SSYSLTAVVKAARPMMTEGG---------SIV----TLTYLGGELVMPNYNV 160

Query: 169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKA 222
            +  AKA++DA  + LA + G + +IRVN I+ GPI        L+       + I    
Sbjct: 161 -MGVAKASLDASVKYLAADLGKE-NIRVNSISAGPI------RTLSAKGISDFNSILKDI 212

Query: 223 RDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
            +  PL +     ++   A +L SD  + + G  L VD G
Sbjct: 213 EERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG 252

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score =  104 bits (261), Expect = 2e-26
 Identities = 77/278 (27%), Positives = 108/278 (38%), Gaps = 57/278 (20%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGRR--KQVLDAAVSALRSLGIK 64
           +L+GK  LI G  +   I + I+    + GA +A    G    K+V   A      LG  
Sbjct: 28  LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLA----EELGAF 83

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFR 116
                 DV        V E+  + +GKLD LV+A          G ++    D S   F 
Sbjct: 84  VA-GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI----DTSEANFT 138

Query: 117 TVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHV 170
             M I SV + T +   A K +  GG         SIL    TL Y  +      Y + +
Sbjct: 139 NTMLI-SVYSLTAVSRRAEKLMADGG---------SIL----TLTYYGAEKVMPNYNV-M 183

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARD 224
             AKAA++A  + LA++ G   +IRVN I+ GPI        LA         I      
Sbjct: 184 GVAKAALEASVKYLAVDLGPQ-NIRVNAISAGPI------KTLAASGIGDFRYILKWNEY 236

Query: 225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             PL +     ++    LY  SD  + V G     D G
Sbjct: 237 NAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score =  104 bits (261), Expect = 3e-26
 Identities = 79/278 (28%), Positives = 118/278 (42%), Gaps = 57/278 (20%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGRR--KQVLDAAVSALRSLGIK 64
           +++GK  +I G  +   + + I+      GA VA+  +     K+V   A     SLG+K
Sbjct: 27  LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLA----ESLGVK 82

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFR 116
                 DV   E    + +   E +G LD +V+A A        G ++    D S   F 
Sbjct: 83  LT-VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYV----DTSLGNFL 137

Query: 117 TVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHV 170
           T M I S  +FT +  +A   +  GG         SIL    TL Y  +      Y + +
Sbjct: 138 TSMHI-SCYSFTYIASKAEPLMTNGG---------SIL----TLSYYGAEKVVPHYNV-M 182

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARD 224
              KAA++A  + LA++ G    IRVN I+ GP+        LA         I +  + 
Sbjct: 183 GVCKAALEASVKYLAVDLGKQ-QIRVNAISAGPV------RTLASSGISDFHYILTWNKY 235

Query: 225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             PL +     D+  AALYL SD G+   G T+ VD G
Sbjct: 236 NSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG 273

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score =  103 bits (258), Expect = 3e-26
 Identities = 64/278 (23%), Positives = 108/278 (38%), Gaps = 56/278 (20%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGRR--KQVLDAAVSALRSLGIK 64
            L GK  L+TG  S   I + I+    + GA +A      +   +V + A      LG  
Sbjct: 6   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFA----AQLGSD 61

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFR 116
            V  + DV        +     + + K D  V++          G+++     ++  GF+
Sbjct: 62  IV-LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV---NAVTREGFK 117

Query: 117 TVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHV 170
              DI S  +F  M       L  G          ++L    TL Y  +      Y + +
Sbjct: 118 IAHDI-SSYSFVAMAKACRSMLNPGS---------ALL----TLSYLGAERAIPNYNV-M 162

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARD 224
             AKA+++A  R +A   G +  +RVN I+ GPI        LA        ++ +    
Sbjct: 163 GLAKASLEANVRYMANAMGPE-GVRVNAISAGPI------RTLAASGIKDFRKMLAHCEA 215

Query: 225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             P+ +     D+  +A +L SD    ++G  + VDGG
Sbjct: 216 VTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 253

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score =  103 bits (259), Expect = 3e-26
 Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 56/278 (20%)

Query: 11  ILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGRR--KQVLDAAVSALRSLGIK 64
           +L+GK ALITG  +   I + I+  F + GA +A      +  K+V + A    +  G  
Sbjct: 18  LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIA----KGFGSD 73

Query: 65  AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA--------GNFLVSAEDLSPNGFR 116
            V  + DV   E  K + +   E++G LDI+V++ A        G  +    D S  GF+
Sbjct: 74  LV-VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVI----DTSREGFK 128

Query: 117 TVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHV 170
             MDI SV +   +  E L  ++           G+I+    TL Y  +      Y + +
Sbjct: 129 IAMDI-SVYSLIALTRELLPLME--------GRNGAIV----TLSYYGAEKVVPHYNV-M 174

Query: 171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARD 224
             AKAA+++  R LA +       R+N I+ GP+        LA         +      
Sbjct: 175 GIAKAALESTVRYLAYDIAKH-GHRINAISAGPV------KTLAAYSITGFHLLMEHTTK 227

Query: 225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG 262
             P  K     D+   A++L SD  + + G  + VD G
Sbjct: 228 VNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score =  104 bits (260), Expect = 4e-26
 Identities = 69/304 (22%), Positives = 112/304 (36%), Gaps = 70/304 (23%)

Query: 12  LKGKVALITGGGS--GIGFEISTQFGKHGASVAI-------------MGRRKQVLDAAVS 56
           L+G+ A + G     G G+ I+      GA VA+             +   +   D  + 
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 57  ALRSLGIKAVG-----------FEGDVRRQEHAKKV----VESTF----EHFGKLDILVN 97
               +    V               D++  +    V    ++       +  G +DILV+
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 98  AAA------GNFLVSAEDLSPNGFRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGG 150
           + A         L    + S  G+       S  +F  +       + +GG         
Sbjct: 127 SLANGPEVTKPLL----ETSRKGYLAASSN-SAYSFVSLLQHFGPIMNEGG--------- 172

Query: 151 SILNISATLHYTAS-----WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI- 204
           S +    TL Y A+      Y   +++AKAA+++ TR LA E G  Y +RVN I+ GP+ 
Sbjct: 173 SAV----TLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK 228

Query: 205 -----GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIV 259
                       K   D     + +  PL +     D+  AAL+L S   + V+G TL V
Sbjct: 229 SRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYV 288

Query: 260 DGGL 263
           D GL
Sbjct: 289 DNGL 292

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  102 bits (256), Expect = 8e-26
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 19/194 (9%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KV L+TG  SG G  I+      G +V    RR + LD  V A      +A+    DV  
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV-AAYPDRAEAISL--DVTD 62

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
            E    V       +G++D+LVN A    + + E+ +    R + ++   G   +    L
Sbjct: 63  GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTA----SWYQIHVAAAKAAVDAITRNLALEWGA 190
             +++        G GS++NIS+     +    S Y    +A KAA++ ++  LA E  A
Sbjct: 123 PQMRE-------RGSGSVVNISSFGGQLSFAGFSAY----SATKAALEQLSEGLADEV-A 170

Query: 191 DYDIRVNGIAPGPI 204
            + I+V  + PG  
Sbjct: 171 PFGIKVLIVEPGAF 184

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score =  101 bits (254), Expect = 3e-25
 Identities = 71/317 (22%), Positives = 104/317 (32%), Gaps = 83/317 (26%)

Query: 12  LKGKVALITGGGS--GIGFEISTQFGKHGASVAI-----------MGRRKQVLDAAVSAL 58
           L+GK A + G     G G+ I       GA V +            G      +      
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 59  RSLGIKAVGFEGDVRRQEHAKKV------------------------------VESTF-- 86
           +    K      +        K+                              +      
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126

Query: 87  --EHFGKLDILVNAAA------GNFLVSAEDLSPNGFRTVMDIDSVGTFT-MCHEALKYL 137
                G++DILV++ A         L      S  G+   +   S  +F  +    L  +
Sbjct: 127 VRADVGQIDILVHSLANGPEVTKPLL----QTSRKGYLAAVSS-SSYSFVSLLQHFLPLM 181

Query: 138 KKGGPGRSSAGGGSILNISATLHYTAS-----WYQIHVAAAKAAVDAITRNLALEWGADY 192
           K+GG         S L     L Y AS      Y   +++AKAA+++  R LA E G   
Sbjct: 182 KEGG---------SAL----ALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRAR 228

Query: 193 DIRVNGIAPGPI------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
            +RVN I+ GP+            +K   D     +    PL K  E  D+  AAL+L S
Sbjct: 229 AVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLS 288

Query: 247 DTGKYVNGTTLIVDGGL 263
              + V G TL VD GL
Sbjct: 289 PLARAVTGATLYVDNGL 305

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score =   99 bits (250), Expect = 6e-25
 Identities = 61/289 (21%), Positives = 97/289 (33%), Gaps = 64/289 (22%)

Query: 10  DILKGKVALITGGGSG--IGFEISTQFGKHGASVAI--MGRRKQVLDAAVSALRSLGIKA 65
            +L GK  L++G  +   I F I+    + GA + +    R + +          L  KA
Sbjct: 3   GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRLPAKA 58

Query: 66  VGFEGDVRRQEHAKKVVESTFEHFG---KLDILVNAAA--------GNFLVSAEDLSPNG 114
              E DV+ +EH   +     E  G   KLD +V++           N      D     
Sbjct: 59  PLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFF---DAPYAD 115

Query: 115 FRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----WYQIH 169
               + I S  ++  M    L  +  GG         SI+     + +  S     Y   
Sbjct: 116 VSKGIHI-SAYSYASMAKALLPIMNPGG---------SIV----GMDFDPSRAMPAYNW- 160

Query: 170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI----------GDTPGMNKLAPDEIN 219
           +  AK+A++++ R +A E G    +R N +A GPI          G            + 
Sbjct: 161 MTVAKSALESVNRFVAREAGKY-GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE 219

Query: 220 SKARDYMPLYKLGEKW------DIAMAALYLTSDTGKYVNGTTLIVDGG 262
                  P+      W       +A     L SD      G  +  DGG
Sbjct: 220 EGWDQRAPI-----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 96.3 bits (240), Expect = 1e-23
 Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 18/203 (8%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVA-IMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
              ++TG   GIG  +  Q  K       I   R       + +++   +  +     V 
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL--TVT 61

Query: 74  RQEHAKKVVESTFEHFG--KLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
             +     V    E  G   L +L+ NA       +  + +       +D+++     + 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 131 HEALKYLKKG----GPGRSSAGGGSILNISA-----TLHYTASWYQIHVA--AAKAAVDA 179
            + L  LK         + S    +++ IS+     T + + S     +A   +KAA++ 
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 180 ITRNLALEWGADYDIRVNGIAPG 202
             R LA++   D ++ V    PG
Sbjct: 182 FGRTLAVDL-KDDNVLVVNFCPG 203

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 96.6 bits (240), Expect = 2e-23
 Identities = 56/261 (21%), Positives = 83/261 (31%), Gaps = 71/261 (27%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-EG 70
            K + A++TGG  GIGFEI  Q   +G  V +  R       AV  L++   + V F + 
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQL 69

Query: 71  DVR-RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAED-------------------- 109
           DV         + +    HFGKLDILVN A         D                    
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129

Query: 110 ----------LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGR-----SSAGGGSILN 154
                      +       + I+  G  ++    +  L+     R     SS G    ++
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVS 189

Query: 155 ISATL-----------------------------HYTASWYQIHVA--AAKAAVDAITRN 183
               L                               T  W     A   +KA ++A TR 
Sbjct: 190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249

Query: 184 LALEWGADYDIRVNGIAPGPI 204
           LA +       +VN + PG +
Sbjct: 250 LANKIP---KFQVNCVCPGLV 267

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 93.2 bits (232), Expect = 2e-22
 Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 13  KGKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              VAL+TGG  GIG  I     +     V +  R      AAV  L++ G+     + D
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   +  + + +   + +G LD+LVN A   F V+            M  +  GT  +C 
Sbjct: 63  IDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAIT 181
           E L  +K           G ++N+S+ +   A          K   + IT
Sbjct: 123 ELLPLIKP---------QGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 163

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 91.3 bits (227), Expect = 1e-21
 Identities = 36/204 (17%), Positives = 65/204 (31%), Gaps = 21/204 (10%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVA--IMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
              LITG   G+G  +                  R +     +  L          E D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 73  RRQEHAKKVVESTFEHFG--KLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           R  +   K+V           L++L  NA           +        +  ++V    +
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141

Query: 130 CHEALKYLKKGGPGRS----SAGGGSILNISA-----TLHYTASWYQIHVA--AAKAAVD 178
               L  LKK            G  +I+N+S+       +     Y    A   +K+A++
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMY----AYRTSKSALN 197

Query: 179 AITRNLALEWGADYDIRVNGIAPG 202
           A T++L+++      I    + PG
Sbjct: 198 AATKSLSVDL-YPQRIMCVSLHPG 220

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 90.7 bits (225), Expect = 4e-21
 Identities = 60/339 (17%), Positives = 109/339 (32%), Gaps = 107/339 (31%)

Query: 14  GKVALITGGGS--GIGFEISTQFGKHGASVAI------MGRRKQVL-------DAAVSAL 58
             +  I G G   G G+ I+ +  K    +             +         D  +   
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 59  RSLGIKAV-------------------GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAA 99
           + + I  +                       ++ +    + V     + +GK+++LV++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 100 A------GNFLVSAEDLSPNGFRTVMDIDSVGTFT-MCHEALKYLKKGGPGRSSAGGGSI 152
           A       + L    + S  G+   +   S  +   +C   +  +K            SI
Sbjct: 122 ANAKEVQKDLL----NTSRKGYLDALSK-SSYSLISLCKYFVNIMKPQS---------SI 167

Query: 153 LNISATLHYTAS-----WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI--- 204
           +    +L Y AS      Y   +++AKAA+++ TR LA   G +Y+IR+N I+ GP+   
Sbjct: 168 I----SLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223

Query: 205 ----------------------------------------GDTPGMNKLAPDEINSKARD 224
                                                     +   N    D     +  
Sbjct: 224 AATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEK 283

Query: 225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           Y PL +     DI   A +L S   + + G T+ VD GL
Sbjct: 284 YAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGL 322

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 83.6 bits (207), Expect = 1e-18
 Identities = 49/200 (24%), Positives = 78/200 (39%), Gaps = 24/200 (12%)

Query: 15  KVALITGGGSGIGFEISTQF---GKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG- 70
            V LITG  SGIG  ++ +          V    R  +       A R+L       E  
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 71  --DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             DVR  +      E   E  G++D+LV  A    L   E L  +   +V+D++ VGT  
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----SWYQIHVAAAKAAVDAITRNL 184
           M    L  +K+ G GR       +L   +            Y     A+K A++ +  +L
Sbjct: 121 MLQAFLPDMKRRGSGR-------VLVTGSVGGLMGLPFNDVY----CASKFALEGLCESL 169

Query: 185 ALEWGADYDIRVNGIAPGPI 204
           A+     + + ++ I  GP+
Sbjct: 170 AVL-LLPFGVHLSLIECGPV 188

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 9/103 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KGK A++  G   +G   +      GA V + GR+     AA  ++       V    +
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNV-TAAE 175

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA-AGNFLVSAEDLSPN 113
                   + V+           +  A   G  L+        
Sbjct: 176 TADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNE 211

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 9/93 (9%)

Query: 9  ADI--LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV 66
          AD+     +  +ITG  SG+G   + +  + GA+V +  R         +A R++  +  
Sbjct: 9  ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRD---TRKGEAAARTMAGQVE 65

Query: 67 GFEGDVRRQEHAKKVVESTFEHFGKLDILVNAA 99
            E D++     ++  +         D+L+N A
Sbjct: 66 VRELDLQDLSSVRRFADG----VSGADVLINNA 94

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 51.7 bits (123), Expect = 1e-07
 Identities = 44/297 (14%), Positives = 83/297 (27%), Gaps = 49/297 (16%)

Query: 14  GKVALITGGGSGIGF--EISTQFGKHGASVAIMGRRKQVLDAAVSA-----------LRS 60
            K  L+ G  SG G    I+  FG    ++ +   +      A +A            ++
Sbjct: 61  PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA 120

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFG-KLDILVNAAA---------GNFLVSA--- 107
            G+ +    GD        +V+E      G ++D++V + A         G    SA   
Sbjct: 121 AGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKP 180

Query: 108 --------------EDLSPNGFRTVMDIDSVGT-FTMCHEALKY-LKKGGPGRSSAGGGS 151
                         + +           +   T   M  +  +  +         A G  
Sbjct: 181 IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGAR 240

Query: 152 ILNIS---ATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP 208
            +  S     + +   W+   +  AK  +D   + L     A +    N      +  T 
Sbjct: 241 SVAFSYIGTEITWPIYWHGA-LGKAKVDLDRTAQRLNARL-AKHGGGANVAVLKSV-VTQ 297

Query: 209 GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
               + P      +  Y  + + G           L  +     +G    VD    L
Sbjct: 298 ASAAI-PVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQNRL 353

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* Length = 405

 Score = 50.9 bits (121), Expect = 2e-07
 Identities = 32/235 (13%), Positives = 64/235 (27%), Gaps = 45/235 (19%)

Query: 14  GKVALITGGGSGIGF--EISTQFGKHGASVAIMGRRKQVLDAAVSA-----------LRS 60
            K  L+ G  +G G    I+  FG    ++ +   R        ++              
Sbjct: 47  PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ 106

Query: 61  LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAA---------GNFLVSA---- 107
            G+ A    GD    E  +  +++  +  G++D ++ + A         G    SA    
Sbjct: 107 KGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPI 166

Query: 108 -------------EDLSPNGFRTVMDIDSVGT-FTMCHEALKY-LKKGGPGRSSAGGGSI 152
                        E +  +  +     +   T   M  E  +  +         A G   
Sbjct: 167 GNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQT 226

Query: 153 LNIS---ATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI 204
              +     + +   W    + AAK  +D     +     A             +
Sbjct: 227 TAFTYLGEKITHDIYWNGS-IGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAV 280

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	299
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.92
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.91
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.91
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.91
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.9
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.89
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.89
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.89
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.89
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.89
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.89
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.89
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.89
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.89
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.88
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.88
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.88
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.88
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.88
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.87
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.87
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.87
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.87
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.86
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.86
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.86
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.86
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.86
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.86
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.85
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.85
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.85
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.85
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.85
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.84
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.84
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.83
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.83
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.82
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.81
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.81
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.81
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.81
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.79
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.79
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.79
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.78
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.78
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.78
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.76
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.76
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.73
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.73
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.71
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.7
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.69
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.68
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.67
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.65
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.62
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.6
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.6
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.59
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.59
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.39
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.36
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.1
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.04
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.96
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.91
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.87
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.8
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.62
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.6
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.6
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.6
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.59
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.55
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.55
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.51
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.49
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.45
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.41
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.39
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.36
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.31
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.29
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.28
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.28
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.21
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.21
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.2
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.19
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.17
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.16
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.16
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.1
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.1
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.07
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.06
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.04
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.99
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.97
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.94
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.94
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.91
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.9
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.88
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.87
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.86
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.85
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.83
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.79
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.76
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.73
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.73
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.71
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.7
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.7
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.69
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.68
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.68
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.67
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.66
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.66
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.66
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.65
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.61
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.57
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.57
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.55
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.54
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.51
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.47
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.46
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.46
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.34
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.33
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.32
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.31
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.29
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.25
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.24
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.24
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.21
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.17
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.13
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.12
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.12
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.09
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.04
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.02
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.02
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.01
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.99
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.98
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.97
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.94
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.92
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.91
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.9
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.89
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.88
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.86
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.86
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.84
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.83
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.8
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.79
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.79
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.79
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.79
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.78
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.76
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.75
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.74
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.73
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.7
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.68
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.68
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.68
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.65
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.65
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.64
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.62
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.62
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.58
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.58
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.52
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.49
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.48
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.48
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.46
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.46
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.42
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.41
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.39
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.39
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.39
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.38
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.33
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.32
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.32
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.31
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.29
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.27
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.26
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.25
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.25
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.24
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.22
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.21
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.21
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.18
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.17
1lnq_A	336	MTHK channels, potassium channel related protein;	96.12
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.12
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.11
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.09
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.08
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.04
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.02
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.92
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.89
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.87
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.87
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.87
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.86
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.84
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.83
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.83
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.81
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.79
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.77
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.76
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.73
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.7
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.65
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.63
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.6
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.59
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.58
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.54
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	95.53
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.53
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.53
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.5
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.49

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=4.8e-59  Score=397.27  Aligned_cols=247  Identities=27%  Similarity=0.448  Sum_probs=228.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.+.++.++++|++++++++++++++.++||
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            68899999999999999999999999999999999999999999999999899999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+... .++.+.+.++|++++++|+.++|+++|+++|+|++++       +|+|||+||..+..+.++..+
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-------~G~IVnisS~~g~~~~~~~~~  156 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-------KGVIVNTASIAGIRGGFAGAP  156 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTCSSSSCHH
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEEechhhcCCCCCChH
Confidence            99999999998754 7889999999999999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch-H-HhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-E-INSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |++||+|+.+|+|+||.||+ ++|||||+|+||+++|++......++ . .........|.+|+.+|+|+|++++||+|+
T Consensus       157 Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd  235 (254)
T 4fn4_A          157 YTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASD  235 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999998 99999999999999887654444332 2 223334457889999999999999999999


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      .+.|+|||+|.+|||+++
T Consensus       236 ~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          236 EASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCCcCCEEEeCCCccc
Confidence            999999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.2e-59  Score=401.14  Aligned_cols=249  Identities=26%  Similarity=0.388  Sum_probs=234.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++.+.+.++.++.+|++++++++++++++.++|
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            57899999999999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++|+++|+++|+|.+++.      +|+||++||..+..+.++..+
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~------~G~IVnisS~~~~~~~~~~~~  158 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS------GGKIINIGSLTSQAARPTVAP  158 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTSBCTTCHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC------CCEEEEEeehhhcCCCCCchh
Confidence            99999999999998899999999999999999999999999999999976531      699999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+|+++.||+ ++|||||+|+||+++|++......+++..+......|++|+++|+|+|++++||+|+.+
T Consensus       159 Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a  237 (255)
T 4g81_D          159 YTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKAS  237 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 99999999999999877554444556667777889999999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      +|+|||+|.+|||++.
T Consensus       238 ~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          238 DYINGQIIYVDGGWLA  253 (255)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCcCCEEEECCCeEe
Confidence            9999999999999864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.2e-57  Score=383.75  Aligned_cols=242  Identities=31%  Similarity=0.374  Sum_probs=221.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+..  ++..+++.+.+.++..+.+|++++++++++++     +
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----T
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----h
Confidence            3689999999999999999999999999999999999864  46677888888899999999999999887764     5


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++|+++|+++|+|.++..      +|+|||+||..+..+.++..+
T Consensus        78 g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~------~G~IVnisS~~~~~g~~~~~~  151 (247)
T 4hp8_A           78 AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGR------SGKVVNIASLLSFQGGIRVPS  151 (247)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTSCCSSCHH
T ss_pred             CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC------CcEEEEEechhhCCCCCCChH
Confidence            89999999999998899999999999999999999999999999999987642      699999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+|++|.||+ ++|||||+|+||+++|++......++...+.+.+..|++|+.+|+|+|++++||+|+.+
T Consensus       152 Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a  230 (247)
T 4hp8_A          152 YTAAKHGVAGLTKLLANEWA-AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 99999999999999877654444455666777889999999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      +|+|||+|.+|||++.
T Consensus       231 ~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          231 DYVHGAILNVDGGWLA  246 (247)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcCCeEEECccccc
Confidence            9999999999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.2e-56  Score=386.02  Aligned_cols=242  Identities=31%  Similarity=0.473  Sum_probs=219.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.+++..+++   +.++..+++|++++++++++++++.++||
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            489999999999999999999999999999999999999888877666   66789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++|+++|+++|+|++         +|+||++||..+..+.++..+|
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---------~G~IInisS~~~~~~~~~~~~Y  173 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---------GSSVVLTGSTAGSTGTPAFSVY  173 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---------EEEEEEECCGGGGSCCTTCHHH
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---------CCeEEEEeehhhccCCCCchHH
Confidence            9999999999988899999999999999999999999999999999954         5899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-----hHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-----DEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      ++||+|+.+|+|+++.||+ ++|||||+|+||+++|++.......     +...+.+....|++|+++|||+|++++||+
T Consensus       174 ~asKaav~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLa  252 (273)
T 4fgs_A          174 AASKAALRSFARNWILDLK-DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLA  252 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999998 9999999999999987765443322     234456677899999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+.+.|+|||+|.+|||++.
T Consensus       253 Sd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          253 SDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CchhcCccCCeEeECcChhh
Confidence            99999999999999999875

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.7e-55  Score=377.10  Aligned_cols=248  Identities=27%  Similarity=0.325  Sum_probs=219.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+..+ ..+++.+.+.++.++.+|++++++++++++++.++||
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            588999999999999999999999999999999999987644 4456767788899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+..... .+.+.++|++.+++|+.++++++|+++|+|+++        +|+||++||..+..+.++..+|
T Consensus        83 ~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--------~G~IVnisS~~~~~~~~~~~~Y  153 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--------RGAIVNISSKTAVTGQGNTSGY  153 (258)
T ss_dssp             CCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCTHHHHCCSSCHHH
T ss_pred             CCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--------CCeEEEEeehhhccCCCCchHH
Confidence            9999999999865444 477999999999999999999999999999765        4999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC----chHHhHHHHhcCCCC-CCCCHHHHHHHHHHHc
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA----PDEINSKARDYMPLY-KLGEKWDIAMAALYLT  245 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~  245 (299)
                      ++||+|+.+|+|+++.||+ ++|||||+|+||+|+|++......    ++...+......|++ |+.+|+|+|++++||+
T Consensus       154 ~asKaav~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLa  232 (258)
T 4gkb_A          154 CASKGAQLALTREWAVALR-EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLL  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999998 999999999999998776544322    234456667788885 8999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccCCCC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLSRPR  269 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~~~~  269 (299)
                      |+.++|+|||+|.+|||++...+.
T Consensus       233 S~~a~~iTG~~i~VDGG~T~l~~s  256 (258)
T 4gkb_A          233 SPRASHTTGEWLFVDGGYTHLDRA  256 (258)
T ss_dssp             SGGGTTCCSCEEEESTTTTTSCTT
T ss_pred             CchhcCccCCeEEECCCcchhhhh
Confidence            999999999999999999865543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.3e-55  Score=370.73  Aligned_cols=235  Identities=32%  Similarity=0.428  Sum_probs=210.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++||++|||||++|||+++|+.|+++|++|++++|+.+.+++      ..+.++..+.+|++++++++++++    ++
T Consensus         7 dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            34689999999999999999999999999999999999865442      234579999999999999887764    58


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+..  ++.+.+.++|++++++|+.++++++|+++|+|+++        +|+|||+||..+..+.++..+
T Consensus        77 g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--------~G~IVnisS~~~~~~~~~~~~  146 (242)
T 4b79_A           77 PRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--------GGSILNIASMYSTFGSADRPA  146 (242)
T ss_dssp             SCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------CEEEEEECCGGGTSCCSSCHH
T ss_pred             CCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--------CCeEEEEeeccccCCCCCCHH
Confidence            99999999999864  56788999999999999999999999999999865        599999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+|+|+.||+ ++|||||+|+||+++|++.......++..+.+....|++|+.+|+|+|++++||+|+.+
T Consensus       147 Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a  225 (242)
T 4b79_A          147 YSASKGAIVQLTRSLACEYA-AERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGA  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 99999999999999987665555566777888899999999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      +|+|||+|.+|||+..
T Consensus       226 ~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          226 SFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCccCceEEECccHhh
Confidence            9999999999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.5e-54  Score=369.23  Aligned_cols=248  Identities=25%  Similarity=0.284  Sum_probs=226.2

Q ss_pred             cCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         9 ~~~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      |.+|+||++|||||+|  |||+++|+.|+++|++|++++|+++.++++.+++.+.+ .++.++++|++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4578899999999875  99999999999999999999999999999988887765 47999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           86 FEHFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      .+++|++|+||||||+...    ..+.+.+.++|+..+++|+.+++.+++.+.++|++         +|+||++||..+.
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---------~G~IVnisS~~~~  151 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---------GGSIVATTYLGGE  151 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---------CEEEEEEECGGGT
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------CCEEEEEeccccc
Confidence            9999999999999997643    34567889999999999999999999999887643         6999999999999


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+.+++..|++||+|+.+|+++|+.||+ ++|||||+|+||+++|++.......++..+.+....|++|+.+|||||+++
T Consensus       152 ~~~~~~~~Y~asKaal~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v  230 (256)
T 4fs3_A          152 FAVQNYNVMGVAKASLEANVKYLALDLG-PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTA  230 (256)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred             cCcccchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999998 999999999999998766555455567778888899999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +||+|+.+.|+|||+|.+|||++..
T Consensus       231 ~fL~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          231 AYLLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHhCchhcCccCCEEEECcCHHhc
Confidence            9999999999999999999999864

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.8e-53  Score=361.49  Aligned_cols=233  Identities=28%  Similarity=0.381  Sum_probs=211.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||+++|+.|+++|++|++++|+++.++++    .+...++.++++|++++++++++++++.++||++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF----AKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999999999998766544    34456799999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||||+....++.+.+.++|++++++|+.++++++|+++|+|+++        +|+||++||..+..+.++..+|++|
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--------~G~IInisS~~~~~~~~~~~~Y~as  149 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--------KGRIINIASTRAFQSEPDSEAYASA  149 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--------TCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--------CCcEEEEeecccccCCCCCHHHHHH
Confidence            99999999988999999999999999999999999999999999875        4999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN  253 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  253 (299)
                      |+|+.+|+|+||.||+ + |||||+|+||+++|++..      +..+......|++|+.+|+|+|++++||+|+  +|+|
T Consensus       150 Kaal~~ltk~lA~ela-~-~IrVN~I~PG~i~t~~~~------~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iT  219 (247)
T 3ged_A          150 KGGIVALTHALAMSLG-P-DVLVNCIAPGWINVTEQQ------EFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFIT  219 (247)
T ss_dssp             HHHHHHHHHHHHHHHT-T-TSEEEEEEECSBCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCC
T ss_pred             HHHHHHHHHHHHHHHC-C-CCEEEEEecCcCCCCCcH------HHHHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCC
Confidence            9999999999999997 6 999999999999876432      2334455678999999999999999999984  6999


Q ss_pred             CcEEEeCCccccCCC
Q 022335          254 GTTLIVDGGLWLSRP  268 (299)
Q Consensus       254 G~~i~~dgg~~~~~~  268 (299)
                      ||+|.+|||++....
T Consensus       220 G~~i~VDGG~s~r~~  234 (247)
T 3ged_A          220 GETIIVDGGMSKRMI  234 (247)
T ss_dssp             SCEEEESTTGGGCCC
T ss_pred             CCeEEECcCHHHhCc
Confidence            999999999987543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.1e-53  Score=361.81  Aligned_cols=241  Identities=22%  Similarity=0.272  Sum_probs=211.2

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      |+..+|+||++|||||++|||+++|+.|+++|++|++++|+.++          ...+..++++|++++++++++++++.
T Consensus         4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A            4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred             hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            44557899999999999999999999999999999999997642          12234578999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           87 EHFGKLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      ++||++|+||||||+...  .++.+.+.++|++.+++|+.++++++|+++|+|++++       .|+||++||..+..+.
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-------~G~Iv~isS~~~~~~~  146 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-------SGVVVHVTSIQRVLPL  146 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCC
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-------CceEEEEEehhhccCC
Confidence            999999999999997543  5788999999999999999999999999999999987       7999999999999987


Q ss_pred             C-CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---------CCCc---hHHhHHHHhcCCCCCC
Q 022335          165 W-YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---------KLAP---DEINSKARDYMPLYKL  231 (299)
Q Consensus       165 ~-~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---------~~~~---~~~~~~~~~~~~~~~~  231 (299)
                      + +...|++||+|+.+|+++|+.||+ ++|||||+|+||+++|++...         ....   ++.........|++|+
T Consensus       147 ~~~~~~Y~asKaal~~lt~~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~  225 (261)
T 4h15_A          147 PESTTAYAAAKAALSTYSKAMSKEVS-PKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRP  225 (261)
T ss_dssp             TTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCC
Confidence            6 679999999999999999999998 899999999999998764211         1111   2233445567899999


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       232 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+|||||++++||+|+.+.|+|||+|.+|||+..
T Consensus       226 g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          226 AKPEEVANLIAFLASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             cCHHHHHHHHHHHhCchhcCccCcEEEECCcCcc
Confidence            9999999999999999999999999999999743

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-50  Score=347.62  Aligned_cols=251  Identities=29%  Similarity=0.406  Sum_probs=230.8

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      |.++.+|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+ .++.++.+|+++++++++++++
T Consensus         2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (262)
T 3pk0_A            2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR   81 (262)
T ss_dssp             -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence            455678899999999999999999999999999999999999999999999998776 6899999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-cc
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TA  163 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~  163 (299)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .++||++||..+. .+
T Consensus        82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~  154 (262)
T 3pk0_A           82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-------SGRVVLTSSITGPITG  154 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-------SCEEEEECCSBTTTBC
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEechhhccCC
Confidence            999999999999999998888899999999999999999999999999999999876       6899999999986 78


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .++...|++||+|++.|+++++.|++ ++||+||+|+||+++|++...  ..++.........|.+++.+|+|+|++++|
T Consensus       155 ~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~~r~~~p~dva~~v~~  231 (262)
T 3pk0_A          155 YPGWSHYGATKAAQLGFMRTAAIELA-PHKITVNAIMPGNIMTEGLLE--NGEEYIASMARSIPAGALGTPEDIGHLAAF  231 (262)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHT--TCHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHH-hhCcEEEEEEeCcCcCccccc--cCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            88999999999999999999999997 889999999999998764322  234556677788899999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++.+.++||++|.+|||+.+.
T Consensus       232 L~s~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          232 LATKEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTCC
T ss_pred             HhCccccCCcCCEEEECCCeecC
Confidence            99999999999999999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.8e-50  Score=346.65  Aligned_cols=251  Identities=28%  Similarity=0.398  Sum_probs=230.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++|++|||||++|||++++++|+++|++|+++ +|+.+.++++.+++...+.++.++.+|++++++++++++++.+.+|+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999986 89999999999999888889999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.++...|+
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~~Y~  155 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-------GGHIVSISSLGSIRYLENYTTVG  155 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-------CEEEEEEEEGGGTSBCTTCHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEECchhhCCCCCCcHHHH
Confidence            99999999988888888999999999999999999999999999999876       79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +||+|+++|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+|+.+.+
T Consensus       156 asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~  234 (258)
T 3oid_A          156 VSKAALEALTRYLAVELS-PKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADM  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTG-GGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTT
T ss_pred             HHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCC
Confidence            999999999999999997 8899999999999987655443334455667778899999999999999999999999999


Q ss_pred             ccCcEEEeCCccccCCCCCC
Q 022335          252 VNGTTLIVDGGLWLSRPRHL  271 (299)
Q Consensus       252 ~~G~~i~~dgg~~~~~~~~~  271 (299)
                      +||++|.+|||++...+...
T Consensus       235 itG~~i~vdGG~~~~~~~~~  254 (258)
T 3oid_A          235 IRGQTIIVDGGRSLLVLEHH  254 (258)
T ss_dssp             CCSCEEEESTTGGGBCC---
T ss_pred             ccCCEEEECCCccCCCCCCC
Confidence            99999999999998776544

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=3.2e-50  Score=345.90  Aligned_cols=247  Identities=34%  Similarity=0.511  Sum_probs=228.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++ +.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+..+.++...
T Consensus        88 g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  159 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-------GGAILNISSMAGENTNVRMAS  159 (256)
T ss_dssp             SCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCGGGTCCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEcCHHHcCCCCCchH
Confidence            999999999999877777 889999999999999999999999999999876       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++... ...++.........|.+++.+|+|+|++++||+++..
T Consensus       160 Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~  237 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVG-PMGIRVNAIAPGAIKTDALAT-VLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAA  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHH-HCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEEccccCchhhh-ccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            99999999999999999997 889999999999998654322 2245556667788999999999999999999999999


Q ss_pred             CCccCcEEEeCCccccC
Q 022335          250 KYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~  266 (299)
                      .+++|++|.+|||+...
T Consensus       238 ~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          238 AWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             TTCCSCEEEESTTSCCC
T ss_pred             cCccCCEEEECCCcccc
Confidence            99999999999998763

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.4e-50  Score=350.11  Aligned_cols=251  Identities=26%  Similarity=0.370  Sum_probs=230.2

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+..|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++.+|++++++++++++++.
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            44578999999999999999999999999999999999999999999888876 57789999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.++..      .|+||++||..+..+.++
T Consensus        94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~  167 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE------GGAIITVASAAALAPLPD  167 (266)
T ss_dssp             HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCGGGTSCCTT
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CeEEEEEcchhhccCCCC
Confidence            99999999999999988888889999999999999999999999999999988642      489999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+..........|.+++.+|+|+|++++||++
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s  246 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELG-PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLAS  246 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999997 88999999999999876543333345555667788899999999999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.+.++||++|.+|||+++
T Consensus       247 ~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          247 DAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCccCcEEEECCCccC
Confidence            9999999999999999876

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-50  Score=351.54  Aligned_cols=250  Identities=26%  Similarity=0.379  Sum_probs=230.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++.       .|+||++||..+..+.++..
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iV~isS~~~~~~~~~~~  173 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-------YGKIVNIGSLTSELARATVA  173 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSBCTTCH
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEccHHhCCCCCCch
Confidence            99999999999998888888999999999999999999999999999999876       69999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+++.
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~  252 (271)
T 4ibo_A          174 PYTVAKGGIKMLTRAMAAEWA-QYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASA  252 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999997 8899999999999987643322223445566677889999999999999999999999


Q ss_pred             CCCccCcEEEeCCccccC
Q 022335          249 GKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~  266 (299)
                      +.++||++|.+|||+...
T Consensus       253 ~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          253 SDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             GTTCCSCEEEESTTGGGB
T ss_pred             ccCCCCcEEEECCCeecc
Confidence            999999999999998763

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-50  Score=348.58  Aligned_cols=258  Identities=28%  Similarity=0.388  Sum_probs=229.2

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +..++||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999877788999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCC
Q 022335           89 FGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWY  166 (299)
Q Consensus        89 ~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~  166 (299)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|.++.       .|+||++||..+. .+.++
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  155 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-------GGSLTFTSSFVGHTAGFAG  155 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCSBTTTBCCTT
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEEcChhhCcCCCCC
Confidence            999999999999864 47788899999999999999999999999999999876       7999999999998 78889


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--CchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.....  ..++.........|.+++.+|+|+|++++||
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  234 (280)
T 3tox_A          156 VAPYAASKAGLIGLVQALAVELG-ARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYL  234 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHH
Confidence            99999999999999999999997 88999999999999877644322  2345556667788999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccCCCCCCchh
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLSRPRHLPKD  274 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~  274 (299)
                      +++...++||++|.+|||+++..+..-+++
T Consensus       235 ~s~~a~~itG~~i~vdGG~~~~~~a~~~~~  264 (280)
T 3tox_A          235 ASDGASFVTGAALLADGGASVTKAAENLYF  264 (280)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGCC-------
T ss_pred             hCccccCCcCcEEEECCCccccccccchHH
Confidence            999999999999999999999765554433

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3.5e-50  Score=347.39  Aligned_cols=248  Identities=25%  Similarity=0.326  Sum_probs=222.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCC-cEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGI-KAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~-~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+. ++.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999998876 343 599999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+++.       .|+||++||..+..+.++.
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  156 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-------DAAIVCVNSLLASQPEPHM  156 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-------TEEEEEEEEGGGTSCCTTB
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-------CeEEEEECCcccCCCCCCc
Confidence            999999999999998888999999999999999999999999999999998876       6999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--------CchHHhHHHHh--cCCCCCCCCHHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--------APDEINSKARD--YMPLYKLGEKWDI  237 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~dv  237 (299)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.....        ..+........  ..|++++.+|+|+
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  235 (265)
T 3lf2_A          157 VATSAARAGVKNLVRSMAFEFA-PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEA  235 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHH
Confidence            9999999999999999999997 88999999999999875432111        11222222222  2899999999999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |++++||+|+.+.++||++|.+|||++.
T Consensus       236 A~~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          236 ARAILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence            9999999999999999999999999876

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.6e-50  Score=348.03  Aligned_cols=250  Identities=30%  Similarity=0.426  Sum_probs=221.0

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +..+++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999887889999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc--cCC
Q 022335           89 FGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT--ASW  165 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~--~~~  165 (299)
                      +|++|+||||||+... .++.+.+.++|++++++|+.++++++++++|+|+++.       .|+||++||..+..  +.+
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~Iv~isS~~~~~~~~~~  175 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-------GGAIVVVSSINGTRTFTTP  175 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCSBTTTBCCST
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CceEEEEcChhhccCCCCC
Confidence            9999999999998654 7888999999999999999999999999999999876       79999999999987  778


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHH-----hHHHHhcCCC--CCCCCHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI-----NSKARDYMPL--YKLGEKWDIA  238 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~dva  238 (299)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..........     ........|.  +++.+|+|+|
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA  254 (283)
T 3v8b_A          176 GATAYTATKAAQVAIVQQLALELG-KHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVA  254 (283)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHH
Confidence            899999999999999999999997 8899999999999987755433221111     1222334555  8899999999


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++++||+|+.+.++||++|.+|||+++.
T Consensus       255 ~~v~fL~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          255 ELIRFLVSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHcCccccCCcCCEEEECcCcccc
Confidence            9999999999999999999999998753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=3e-49  Score=338.29  Aligned_cols=243  Identities=29%  Similarity=0.397  Sum_probs=222.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..   +..++.+|++++++++++++++.+++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999999988888777643   57889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.++...
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~~  154 (248)
T 3op4_A           82 GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-------QGRIINVGSVVGTMGNAGQAN  154 (248)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHHCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CCEEEEEcchhhcCCCCCChH
Confidence            9999999999998888888999999999999999999999999999999876       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++. ... .++.........|.+++.+|+|+|++++||+++..
T Consensus       155 Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~-~~~-~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~  231 (248)
T 3op4_A          155 YAAAKAGVIGFTKSMAREVA-SRGVTVNTVAPGFIETDMT-KAL-NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEA  231 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSTTT-TTS-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HhCeEEEEEeeCCCCCchh-hhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcc
Confidence            99999999999999999997 8899999999999986643 333 34455566778899999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .++||++|.+|||+++
T Consensus       232 ~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          232 AYITGETLHVNGGMYM  247 (248)
T ss_dssp             TTCCSCEEEESTTSSC
T ss_pred             CCccCcEEEECCCeec
Confidence            9999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=7.3e-50  Score=347.56  Aligned_cols=255  Identities=45%  Similarity=0.719  Sum_probs=230.7

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .++...|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|+++++++++++++
T Consensus        19 ~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   98 (277)
T 4fc7_A           19 LFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ   98 (277)
T ss_dssp             SBCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3455578999999999999999999999999999999999999998888888854 367899999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.++.       .|+||++||..+..+.
T Consensus        99 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~  171 (277)
T 4fc7_A           99 ALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-------GGVIVNITATLGNRGQ  171 (277)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-------CEEEEEECCSHHHHTC
T ss_pred             HHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CCEEEEECchhhCCCC
Confidence            999999999999999988778888999999999999999999999999999998766       6999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-CchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++..... .............|++++.+|+|+|++++|
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~f  250 (277)
T 4fc7_A          172 ALQVHAGSAKAAVDAMTRHLAVEWG-PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY  250 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999997 88999999999999876432221 234455666778899999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccCCC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      |+|+.+.++||++|.+|||+++..+
T Consensus       251 L~s~~~~~itG~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          251 LASPLASYVTGAVLVADGGAWLTFP  275 (277)
T ss_dssp             HHSGGGTTCCSCEEEESTTHHHHCC
T ss_pred             HcCCccCCcCCCEEEECCCcccCCC
Confidence            9999999999999999999987544

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.6e-49  Score=341.74  Aligned_cols=250  Identities=44%  Similarity=0.670  Sum_probs=224.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++++++++++++++.+.+|
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999999999999999877778899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|.++..      .|+||++||..+..+.++...|
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~Y  156 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI------KGNIINMVATYAWDAGPGVIHS  156 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------CCEEEEECCGGGGSCCTTCHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC------CcEEEEECchhhccCCCCcHHH
Confidence            9999999999888888889999999999999999999999999999955431      5899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-CchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      ++||+|+++|+++++.|++.++||+||+|+||+++|++..... ..++..+......|.+++.+|+|+|++++||+++.+
T Consensus       157 ~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  236 (257)
T 3imf_A          157 AAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEA  236 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999999999999999995245999999999999877544322 223344556677899999999999999999999999


Q ss_pred             CCccCcEEEeCCccccC
Q 022335          250 KYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~  266 (299)
                      .++||++|.+|||+.+.
T Consensus       237 ~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          237 AYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             TTCCSCEEEESTTTTSC
T ss_pred             cCccCCEEEECCCcccC
Confidence            99999999999999874

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.3e-49  Score=343.11  Aligned_cols=245  Identities=32%  Similarity=0.465  Sum_probs=227.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|+++.++++++++++.+.+|
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            58899999999999999999999999999999999999999999999988888899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.+++       .|+||++||..+..+.++...|
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  177 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-------GGRIVNITSVVGSAGNPGQVNY  177 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHHCCTTBHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CCEEEEECchhhCCCCCCchhH
Confidence            999999999998888889999999999999999999999999999999876       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. .++.........|.+++.+|+|+|++++||+++...
T Consensus       178 ~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~-~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~  254 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIG-SRGITVNCVAPGFIDTDMTK-GL-PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAG  254 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHH-HS-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCcchh-hc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcC
Confidence            9999999999999999997 88999999999999865432 22 334455667788999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|++|++|||+.+
T Consensus       255 ~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          255 YITGTTLHVNGGMFM  269 (270)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CccCcEEEECCCccc
Confidence            999999999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2.5e-49  Score=342.11  Aligned_cols=248  Identities=28%  Similarity=0.387  Sum_probs=213.0

Q ss_pred             CCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335            5 SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         5 ~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .|.++..|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++.+|+++++++++++++
T Consensus        18 g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~   94 (266)
T 3grp_A           18 GPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEV   94 (266)
T ss_dssp             ---CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHH
Confidence            456677899999999999999999999999999999999999998887776554   56799999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+.++++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|+++.       .|+||++||..+..+.
T Consensus        95 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~  167 (266)
T 3grp_A           95 AEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-------YGRIINITSIVGVVGN  167 (266)
T ss_dssp             HHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CcEEEEECCHHHcCCC
Confidence            999999999999999998888888999999999999999999999999999999876       7999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. .++..+......|.+++.+|+|+|++++||
T Consensus       168 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~r~~~~edvA~~v~~L  244 (266)
T 3grp_A          168 PGQTNYCAAKAGLIGFSKALAQEIA-SRNITVNCIAPGFIKSAMTD-KL-NEKQKEAIMAMIPMKRMGIGEEIAFATVYL  244 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHH-TC-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCcCCCchhh-cc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999997 88999999999999865432 22 345556677889999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++.+.++||++|.+|||+.+
T Consensus       245 ~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          245 ASDEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             HSGGGTTCCSCEEEESTTC--
T ss_pred             hCccccCccCCEEEECCCeee
Confidence            999999999999999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=8.6e-49  Score=335.09  Aligned_cols=244  Identities=29%  Similarity=0.443  Sum_probs=225.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++|++|||||++|||++++++|+++|++|+++++ +.+.++++.+++...+.++.++.+|++++++++++++++.+++|
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999998877 56778888888888888999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.++...|
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  154 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-------SGAIINLSSVVGAVGNPGQANY  154 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHHCCTTCHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CCEEEEEcchhhcCCCCCChHH
Confidence            999999999998888889999999999999999999999999999999876       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|+++|+++++.|++ ++||++|+|+||+++|++. ... .++..+......|.+++.+|+|+|++++||+++...
T Consensus       155 ~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~-~~~-~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~  231 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELA-SRGITVNAVAPGFIVSDMT-DAL-SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAK  231 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCC-SCS-CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECCCcCCcc-ccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999997 8899999999999986643 333 345566777889999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      ++||++|++|||+++
T Consensus       232 ~itG~~i~vdgG~~~  246 (246)
T 3osu_A          232 YITGQTIHVNGGMYM  246 (246)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3.7e-49  Score=345.44  Aligned_cols=249  Identities=28%  Similarity=0.387  Sum_probs=228.8

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+.+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++++++++++++++.
T Consensus        35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            3557899999999999999999999999999999999999999999999997766 689999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASW  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~  165 (299)
                      +.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+. .+.+
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~iV~isS~~~~~~~~~  187 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-------RGRVILTSSITGPVTGYP  187 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-------SCEEEEECCSBTTTBBCT
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEEeChhhccCCCC
Confidence            9999999999999998888899999999999999999999999999999999876       6999999999986 8888


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|++.|+++++.|++ ++||+||+|+||+++|+... .. .++..+......|.+++.+|+|+|++++||+
T Consensus       188 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~  264 (293)
T 3rih_A          188 GWSHYGASKAAQLGFMRTAAIELA-PRGVTVNAILPGNILTEGLV-DM-GEEYISGMARSIPMGMLGSPVDIGHLAAFLA  264 (293)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHH-HT-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCCcCcchh-hc-cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999997 88999999999999865432 22 2445566777889999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++.+.++||++|.+|||+.+.
T Consensus       265 s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          265 TDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             SGGGTTCCSCEEEESTTTTCB
T ss_pred             CccccCCCCCEEEECCCccCC
Confidence            999999999999999999874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.2e-49  Score=344.85  Aligned_cols=252  Identities=27%  Similarity=0.385  Sum_probs=224.4

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ++...++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++
T Consensus        16 ~~~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (279)
T 3sju_A           16 PRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAA   95 (279)
T ss_dssp             ---------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            34444678999999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHH--HHHhcCCCCCCCCCceEEEecccccccc
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALK--YLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      .+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|  .|.+++       .|+||++||..+..+
T Consensus        96 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-------~g~iV~isS~~~~~~  168 (279)
T 3sju_A           96 VERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-------WGRIVNIASTGGKQG  168 (279)
T ss_dssp             HHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-------CEEEEEECCGGGTSC
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-------CcEEEEECChhhccC
Confidence            99999999999999998888888999999999999999999999999999  577765       699999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---------CCCchHHhHHHHhcCCCCCCCCH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---------KLAPDEINSKARDYMPLYKLGEK  234 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~  234 (299)
                      .++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++...         ....++..+.+....|.+++.+|
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  247 (279)
T 3sju_A          169 VMYAAPYTASKHGVVGFTKSVGFELA-KTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTP  247 (279)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCH
Confidence            99999999999999999999999997 889999999999998754211         11345566677788999999999


Q ss_pred             HHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          235 WDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       235 ~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|+|++++||+++.+.++||++|.+|||++.
T Consensus       248 edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          248 EEVAGLVGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             HHHHHHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            9999999999999999999999999999875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-48  Score=339.59  Aligned_cols=252  Identities=23%  Similarity=0.335  Sum_probs=221.0

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEcCCC
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR------------KQVLDAAVSALRSLGIKAVGFEGDVR   73 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~   73 (299)
                      |.++.+|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++
T Consensus         2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   81 (281)
T 3s55_A            2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK   81 (281)
T ss_dssp             ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            456678999999999999999999999999999999999997            66777788888877889999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSIL  153 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv  153 (299)
                      ++++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .|+||
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv  154 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-------YGRIV  154 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEE
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEE
Confidence            99999999999999999999999999998888899999999999999999999999999999999876       69999


Q ss_pred             EeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-----C------Cc-hHHhHH
Q 022335          154 NISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-----L------AP-DEINSK  221 (299)
Q Consensus       154 ~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-----~------~~-~~~~~~  221 (299)
                      ++||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....     .      .. ......
T Consensus       155 ~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (281)
T 3s55_A          155 TVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV-GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESV  233 (281)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHH
T ss_pred             EECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHH
Confidence            999999999999999999999999999999999997 8899999999999987754321     0      00 111111


Q ss_pred             --HHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          222 --ARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       222 --~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                        .....+ +++.+|+|+|++++||+++.+.++||++|.+|||+...
T Consensus       234 ~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          234 FASLHLQY-APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HHHHCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHhhhccC-cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence              122334 78899999999999999999999999999999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=5.4e-49  Score=341.77  Aligned_cols=248  Identities=26%  Similarity=0.407  Sum_probs=225.6

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +..+|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC--C
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS--W  165 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~--~  165 (299)
                      ++|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++..      +++||++||..+..+.  +
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~------~g~iv~isS~~~~~~~~~~  179 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL------GGTIITTASMSGHIINIPQ  179 (276)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCGGGTSCCCSS
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC------CcEEEEECchHhcccCCCC
Confidence            9999999999999988888889999999999999999999999999999998752      3899999999887654  3


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|++.|+++++.|++ ++||+||+|+||+|+|++... .  .+....+....|++++.+|+|+|++++||+
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~-~--~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  255 (276)
T 3r1i_A          180 QVSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVSPGYIRTELVEP-L--ADYHALWEPKIPLGRMGRPEELTGLYLYLA  255 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTTGG-G--GGGHHHHGGGSTTSSCBCGGGSHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCcccc-c--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            678999999999999999999997 889999999999998765432 2  234456677889999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++.+.++||++|.+|||++.
T Consensus       256 s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          256 SAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCccCcEEEECcCccC
Confidence            99999999999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-49  Score=340.82  Aligned_cols=246  Identities=22%  Similarity=0.347  Sum_probs=225.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+++|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|.++        +|+||++||..+..+.+++..
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~  159 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--------KGAVVNVNSMVVRHSQAKYGA  159 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--------TCEEEEECCGGGGCCCTTCHH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------CCEEEEECcchhccCCCccHH
Confidence            999999999985 45788899999999999999999999999999999876        389999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++....         ...++..+......|.+++.+|+|+|++
T Consensus       160 Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  238 (264)
T 3ucx_A          160 YKMAKSALLAMSQTLATELG-EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHH
Confidence            99999999999999999997 8899999999999987543211         1234455666778899999999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCcccc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++||+|+.+.++||++|.+|||+++
T Consensus       239 v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          239 ILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHcCccccCCCCCEEEECCCccC
Confidence            9999999999999999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=8.5e-49  Score=339.38  Aligned_cols=246  Identities=28%  Similarity=0.420  Sum_probs=224.4

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      |+...++||++|||||++|||+++|++|+++|++|++++| +.+.++.+.+++...+.++.++.+|++++++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4455788999999999999999999999999999999988 677788888888888889999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|+++.       .|+||++||..+..+.+
T Consensus       101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  173 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-------SGRIINIASVVGEMGNP  173 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCHHHHHCCT
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEECchhhcCCCC
Confidence            99999999999999998888888999999999999999999999999999999876       68999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.     .....+......|.+++.+|+|+|++++||+
T Consensus       174 ~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~-----~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~  247 (269)
T 4dmm_A          174 GQANYSAAKAGVIGLTKTVAKELA-SRGITVNAVAPGFIATDMT-----SELAAEKLLEVIPLGRYGEAAEVAGVVRFLA  247 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBTTSCS-----CHHHHHHHGGGCTTSSCBCHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEECCCcCccc-----ccccHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999997 8899999999999987643     2233355677889999999999999999999


Q ss_pred             CC-CCCCccCcEEEeCCcccc
Q 022335          246 SD-TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~-~~~~~~G~~i~~dgg~~~  265 (299)
                      ++ ...++||++|.+|||+.+
T Consensus       248 s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          248 ADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HCGGGGGCCSCEEEESTTSCC
T ss_pred             CCcccCCCcCCEEEECCCeec
Confidence            98 788999999999999876

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=7.2e-49  Score=341.98  Aligned_cols=248  Identities=30%  Similarity=0.432  Sum_probs=227.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.   ++.++.+|++++++++++++++.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999987655   799999999999999999999999


Q ss_pred             HcCCccEEEEcCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           88 HFGKLDILVNAAAG-NFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        88 ~~g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      .+|++|+||||||+ ....++.+.+.++|++++++|+.++++++++++|.|.++.       .|+||++||..+..+.++
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  160 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-------GGSFVGISSIAASNTHRW  160 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------CEEEEEECCHHHHSCCTT
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEeCHHHcCCCCC
Confidence            99999999999997 4456788899999999999999999999999999999876       799999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++........+.........|++++.+|+|+|++++||++
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s  239 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELG-ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLS  239 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999997 88999999999999876543322344555667778899999999999999999999


Q ss_pred             CCCCCccCcEEEeCCccccC
Q 022335          247 DTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +...+++|+.|.+|||+.+.
T Consensus       240 ~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          240 DAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             GGGTTCCSCEEEESTTGGGS
T ss_pred             cccCCCCCCEEEeCCChhcc
Confidence            99999999999999999986

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=5e-49  Score=341.49  Aligned_cols=246  Identities=28%  Similarity=0.398  Sum_probs=222.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+ +.+++..+++.+.+.++.++.+|+++.++++++. +..+.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~~~~~~  104 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVA-EELAAT  104 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHH-HHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH-HHHHhc
Confidence            46889999999999999999999999999999999965 5567778888777888999999999999999994 455667


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+..+.++...
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~IV~isS~~~~~~~~~~~~  177 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-------SGRIVTIASMLSFQGGRNVAA  177 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCSSCHH
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEEcchHhcCCCCCChh
Confidence            9999999999998888888999999999999999999999999999999876       699999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++.........|.+++.+|+|+|++++||+++.+
T Consensus       178 Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a  256 (273)
T 3uf0_A          178 YAASKHAVVGLTRALASEWA-GRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAA  256 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence            99999999999999999997 88999999999999876543333344555667778899999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .++||++|.+|||+.+
T Consensus       257 ~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          257 SYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCCcCCEEEECcCccC
Confidence            9999999999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.4e-48  Score=339.47  Aligned_cols=248  Identities=28%  Similarity=0.392  Sum_probs=219.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC----------------hhHHHHHHHHHHhcCCcEEEEEcCCC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR----------------KQVLDAAVSALRSLGIKAVGFEGDVR   73 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~----------------~~~~~~~~~~~~~~~~~v~~~~~Dl~   73 (299)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+                .+.+++..+++...+.++.++.+|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            35789999999999999999999999999999999887                77788888888877889999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCCCCC-CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceE
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSI  152 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~i  152 (299)
                      ++++++++++++.+.+|++|+||||||+.... ++.+.+.++|++++++|+.++++++++++|+|.++..      .|+|
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~------~g~i  160 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR------GGSI  160 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC------CcEE
Confidence            99999999999999999999999999987665 4788899999999999999999999999999988642      5899


Q ss_pred             EEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC------------CCchHHhH
Q 022335          153 LNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK------------LAPDEINS  220 (299)
Q Consensus       153 v~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~------------~~~~~~~~  220 (299)
                      |++||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....            ...++...
T Consensus       161 v~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T 3uve_A          161 ILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAP  239 (286)
T ss_dssp             EEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHH
T ss_pred             EEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHH
Confidence            9999999999999999999999999999999999997 8899999999999987754321            01111111


Q ss_pred             --HHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          221 --KARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       221 --~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                        ......| +++.+|+|+|++++||+|+.+.++||++|.+|||+++
T Consensus       240 ~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          240 ICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence              1334456 7889999999999999999999999999999999876

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=7.6e-49  Score=335.60  Aligned_cols=245  Identities=27%  Similarity=0.407  Sum_probs=219.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4678999999999999999999999999999999999998888877766   5679999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++.      .|+||++||..+..+.++...
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  152 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK------AGRVISIASNTFFAGTPNMAA  152 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCTHHHHTCTTCHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC------CcEEEEECchhhccCCCCchh
Confidence            99999999999988888889999999999999999999999999999988642      489999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++... ...+..........|++++.+|+|+|+++.||+++.+
T Consensus       153 Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~  230 (247)
T 3rwb_A          153 YVAAKGGVIGFTRALATELG-KYNITANAVTPGLIESDGVKA-SPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDA  230 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-SGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCccccc-cChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999997 889999999999998654322 2222222233333788999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .++||++|.+|||+..
T Consensus       231 ~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          231 RWITGQTLNVDAGMVR  246 (247)
T ss_dssp             TTCCSCEEEESTTSSC
T ss_pred             cCCCCCEEEECCCccC
Confidence            9999999999999863

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-48  Score=336.12  Aligned_cols=240  Identities=30%  Similarity=0.437  Sum_probs=219.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.+|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999999998888877766   56789999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           91 KLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        91 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++|+||||||+..  ...+.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.++..
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~  157 (271)
T 3tzq_B           85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-------GGAIVNISSATAHAAYDMST  157 (271)
T ss_dssp             CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------CEEEEEECCGGGTSBCSSCH
T ss_pred             CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEECCHHHcCCCCCCh
Confidence            9999999999863  34567889999999999999999999999999999876       79999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|++..... .+.....+....|.+++.+|+|+|++++||+++.
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~  235 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYG-RHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR  235 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999997 88999999999999876544333 4556667778889999999999999999999999


Q ss_pred             CCCccCcEEEeCCc
Q 022335          249 GKYVNGTTLIVDGG  262 (299)
Q Consensus       249 ~~~~~G~~i~~dgg  262 (299)
                      ..++||++|.+|||
T Consensus       236 ~~~itG~~i~vdGG  249 (271)
T 3tzq_B          236 AAFITGQVIAADSG  249 (271)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             cCCcCCCEEEECCC
Confidence            99999999999999

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.5e-48  Score=337.82  Aligned_cols=252  Identities=29%  Similarity=0.450  Sum_probs=224.3

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .++..++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++
T Consensus        19 ~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Confidence            44556788999999999999999999999999999999999998888776664   567999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+..+.+
T Consensus        96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  168 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-------GGSIINTTSYTATSAIA  168 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-------CEEEEEECCGGGTSCCT
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CcEEEEECchhhCcCCC
Confidence            99999999999999998888899999999999999999999999999999998866       68999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....    ..............|.+++.+|+|+|+++
T Consensus       169 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  247 (277)
T 4dqx_A          169 DRTAYVASKGAISSLTRAMAMDHA-KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAM  247 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHH
Confidence            999999999999999999999997 8899999999999987642111    11223333466778999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccCCC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      +||+++...+++|++|.+|||+.+...
T Consensus       248 ~~L~s~~~~~itG~~i~vdGG~~~~~~  274 (277)
T 4dqx_A          248 LFLASDRSRFATGSILTVDGGSSIGNH  274 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSSSCCT
T ss_pred             HHHhCCccCCCcCCEEEECCchhhhhc
Confidence            999999999999999999999988643

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=9.3e-49  Score=339.38  Aligned_cols=250  Identities=29%  Similarity=0.443  Sum_probs=223.6

Q ss_pred             CCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Q 022335            5 SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus         5 ~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      .++....|+||++|||||++|||++++++|+++|++|+++++ +.+.++.+.+++...+.++.++.+|++++++++++++
T Consensus         9 ~~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A            9 ETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             --CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             cccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            345556789999999999999999999999999999999765 5667888888888888899999999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc-ccc
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL-HYT  162 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~-~~~  162 (299)
                      ++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|.+         +|+||++||.. +..
T Consensus        89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~  159 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---------GGRIVLTSSNTSKDF  159 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---------TCEEEEECCTTTTTC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---------CCeEEEEeCchhccC
Confidence            99999999999999999988888889999999999999999999999999999864         48999999988 567


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC----------CCCchHHhHHHHhcCCCCCCC
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN----------KLAPDEINSKARDYMPLYKLG  232 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~  232 (299)
                      +.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++...          ....++.........|++++.
T Consensus       160 ~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  238 (270)
T 3is3_A          160 SVPKHSLYSGSKGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNG  238 (270)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCB
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCC
Confidence            888999999999999999999999997 889999999999998765321          223345556667788999999


Q ss_pred             CHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       233 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      +|+|+|++++||+++.+.++||++|.+|||+.
T Consensus       239 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          239 WPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CHHHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            99999999999999999999999999999974

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=9.5e-49  Score=336.54  Aligned_cols=245  Identities=22%  Similarity=0.321  Sum_probs=219.7

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +..++||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++.+|++++++++++++++.+.
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999998888877766   457999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++         .|+||++||..+..+.++..
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~  150 (255)
T 4eso_A           80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---------GGSIVFTSSVADEGGHPGMS  150 (255)
T ss_dssp             HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEECCGGGSSBCTTBH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---------CCEEEEECChhhcCCCCCch
Confidence            999999999999988888899999999999999999999999999998854         48999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch----HHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD----EINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|+........+    ..........|.+++.+|+|+|++++||
T Consensus       151 ~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  229 (255)
T 4eso_A          151 VYSASKAALVSFASVLAAELL-PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFL  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999997 88999999999999876543322222    2233455678999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccCC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +++ ..++||++|.+|||+....
T Consensus       230 ~s~-~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          230 AFE-ATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             HHT-CTTCCSCEEEESTTTTTTB
T ss_pred             cCc-CcCccCCEEEECCCccccC
Confidence            998 8999999999999998753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-48  Score=338.62  Aligned_cols=249  Identities=26%  Similarity=0.380  Sum_probs=217.0

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +.+|++|++|||||++|||+++|++|+++|++|++++| +.+.++.+.+++... +.++.++.+|++++++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999 667788888888765 5689999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+..+.++
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  172 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-------WGRIINIASAHGLVASPF  172 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTT
T ss_pred             HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEECCcccccCCCC
Confidence            9999999999999998888888999999999999999999999999999999876       799999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---------hH-HhHHHHhcCCCCCCCCHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---------DE-INSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~d  236 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......         ++ ..+.+....|.+++.+|+|
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ed  251 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVA-ESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQ  251 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHH
Confidence            99999999999999999999997 8899999999999987654332211         11 1223456788999999999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|++++||+++.+.++||++|.+|||+++
T Consensus       252 vA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          252 VASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             HHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            99999999999999999999999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=6.2e-48  Score=338.95  Aligned_cols=247  Identities=28%  Similarity=0.424  Sum_probs=219.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR------------KQVLDAAVSALRSLGIKAVGFEGDVRRQEHA   78 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v   78 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|+++++++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            5889999999999999999999999999999999987            7778888888888888999999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCCCC-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +++++++.+.+|++|+||||||+..... +.+.+.++|++++++|+.++++++++++|.|.++..      .|+||++||
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~------~g~Iv~isS  178 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR------GGSIVFTSS  178 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS------CEEEEEECC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CcEEEEECC
Confidence            9999999999999999999999877654 888999999999999999999999999999987542      589999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------C--C-chHH--hHHHH
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------L--A-PDEI--NSKAR  223 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~--~-~~~~--~~~~~  223 (299)
                      ..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++....         .  . .+..  .....
T Consensus       179 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (299)
T 3t7c_A          179 IGGLRGAENIGNYIASKHGLHGLMRTMALELG-PRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM  257 (299)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHH
T ss_pred             hhhccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhh
Confidence            99999999999999999999999999999997 8899999999999987754321         0  0 0111  11234


Q ss_pred             hcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          224 DYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       224 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ...| +++.+|+|+|++++||+|+.+.++||++|.+|||+.+
T Consensus       258 ~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          258 HVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            4456 7889999999999999999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-48  Score=338.84  Aligned_cols=247  Identities=30%  Similarity=0.449  Sum_probs=219.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-------------ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-------------RKQVLDAAVSALRSLGIKAVGFEGDVRRQEH   77 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~   77 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...+.++.++.+|+++.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            578999999999999999999999999999999998             6778888888888878899999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.++..      .|+||++||
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~------~g~iv~isS  161 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR------GGSIILISS  161 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC------CCEEEEEcc
Confidence            99999999999999999999999988888889999999999999999999999999999988642      489999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchHHhHHHHhcCCC
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDEINSKARDYMPL  228 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~  228 (299)
                      ..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.....         ..+..........|.
T Consensus       162 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  240 (277)
T 3tsc_A          162 AAGMKMQPFMIHYTASKHAVTGLARAFAAELG-KHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD  240 (277)
T ss_dssp             GGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC
T ss_pred             HhhCCCCCCchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC
Confidence            99999999999999999999999999999997 88999999999999876532210         011111122233454


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                       ++.+|+|+|++++||+|+.+.++||++|.+|||++.
T Consensus       241 -r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          241 -WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence             689999999999999999999999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4e-48  Score=333.44  Aligned_cols=246  Identities=30%  Similarity=0.412  Sum_probs=222.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999998888877766   4578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.      .|+||++||..+..+.++...
T Consensus        81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  154 (259)
T 4e6p_A           81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR------GGKIINMASQAGRRGEALVAI  154 (259)
T ss_dssp             SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCGGGTSCCTTBHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CeEEEEECChhhccCCCCChH
Confidence            99999999999988888889999999999999999999999999999987642      489999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++....         ....+.........|.+++.+|+|+|++
T Consensus       155 Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  233 (259)
T 4e6p_A          155 YCATKAAVISLTQSAGLDLI-KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGM  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHH
Confidence            99999999999999999997 8899999999999987643211         1133444566677899999999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCcccc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++||+++...+++|++|++|||+.+
T Consensus       234 v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          234 AIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHhCCccCCCCCCEEEECcChhc
Confidence            9999999999999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-48  Score=337.79  Aligned_cols=247  Identities=31%  Similarity=0.438  Sum_probs=214.7

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .+..+.++||++|||||++|||+++|++|+++|++|+++ .++.+.++.+.+++...+.++.++.+|+++++++++++++
T Consensus        19 ~~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   98 (267)
T 3u5t_A           19 YFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFAT   98 (267)
T ss_dssp             --------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            344456789999999999999999999999999999987 5667778888888888888999999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++         .|+||++||..+..+.
T Consensus        99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~  169 (267)
T 3u5t_A           99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---------GGRIINMSTSQVGLLH  169 (267)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---------EEEEEEECCTHHHHCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------CCeEEEEeChhhccCC
Confidence            9999999999999999988888889999999999999999999999999999854         4899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.... ..++..+.+....|.+++.+|+|+|++++||
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  247 (267)
T 3u5t_A          170 PSYGIYAAAKAGVEAMTHVLSKELR-GRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAKLAPLERLGTPQDIAGAVAFL  247 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEEECCCcCcccccc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999997 8899999999999987654332 2344556677788999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcc
Q 022335          245 TSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~  263 (299)
                      +++.+.++||++|.+|||+
T Consensus       248 ~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          248 AGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             HSTTTTTCCSEEEEESSSC
T ss_pred             hCccccCccCCEEEeCCCc
Confidence            9999999999999999996

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-47  Score=332.65  Aligned_cols=249  Identities=27%  Similarity=0.410  Sum_probs=221.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999888888887777789999999999999999999999999


Q ss_pred             -CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 -GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                       +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++.       .++||++||..+..+.++..
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~  169 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-------NGNVIFLSSIAGFSALPSVS  169 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------SEEEEEECCGGGTSCCTTCH
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcCHhhcCCCCCcc
Confidence             9999999999988778888999999999999999999999999999998875       68999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC----chHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA----PDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      .|++||+|++.|+++++.|++ ++||+||+|+||+++|++......    .++..+......|.+++.+|+|+|++++||
T Consensus       170 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  248 (273)
T 1ae1_A          170 LYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFL  248 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999997 889999999999998765432222    233344455668899999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +++...+++|+++.+|||+.+.
T Consensus       249 ~s~~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          249 CFPAASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGC
T ss_pred             hCccccCcCCCEEEECCCcccC
Confidence            9998999999999999998763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.4e-49  Score=341.43  Aligned_cols=249  Identities=25%  Similarity=0.337  Sum_probs=215.9

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      |...+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++.
T Consensus        22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (277)
T 3gvc_A           22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACV   98 (277)
T ss_dssp             -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHH
Confidence            4455789999999999999999999999999999999999998888877766   5678999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+..+.++
T Consensus        99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~Iv~isS~~~~~~~~~  171 (277)
T 3gvc_A           99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-------GGAIVNLSSLAGQVAVGG  171 (277)
T ss_dssp             HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------CEEEEEECCGGGTSCCTT
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEcchhhccCCCC
Confidence            9999999999999998888899999999999999999999999999999999876       799999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhH---HHHhcCCCCCCCCHHHHHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINS---KARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ...|++||+|++.|+++++.|++ ++||+||+|+||+++|++......  ......   ......|.+++.+|+|+|+++
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  250 (277)
T 3gvc_A          172 TGAYGMSKAGIIQLSRITAAELR-SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIV  250 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHH
Confidence            99999999999999999999997 889999999999998754211100  001111   111134567889999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +||+++.+.++||++|.+|||+...
T Consensus       251 ~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          251 VFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHcCCccCCccCcEEEECCcchhc
Confidence            9999999999999999999998763

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-48  Score=337.37  Aligned_cols=249  Identities=26%  Similarity=0.349  Sum_probs=218.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-------------ChhHHHHHHHHHHhcCCcEEEEEcCCCCH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-------------RKQVLDAAVSALRSLGIKAVGFEGDVRRQ   75 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   75 (299)
                      +..|+||++|||||++|||+++|++|+++|++|++++|             +.+.++++.+++...+.++.++.+|++++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            34688999999999999999999999999999999998             67888888888888888999999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      ++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+++..      .|+||++
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~------~g~iv~i  163 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN------GGSIVVV  163 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS------CEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC------CCEEEEE
Confidence            9999999999999999999999999988888889999999999999999999999999999988642      5899999


Q ss_pred             ccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch------HHhHH--HHhcCC
Q 022335          156 SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD------EINSK--ARDYMP  227 (299)
Q Consensus       156 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~------~~~~~--~~~~~~  227 (299)
                      ||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+      .....  .....|
T Consensus       164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (280)
T 3pgx_A          164 SSSAGLKATPGNGHYSASKHGLTALTNTLAIELG-EYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP  242 (280)
T ss_dssp             CCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC
T ss_pred             cchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC
Confidence            9999999999999999999999999999999997 88999999999999876532110000      00000  112234


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      . ++.+|+|+|++++||+++.+.++||++|.+|||+..
T Consensus       243 ~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          243 N-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             S-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             C-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            4 688999999999999999999999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-47  Score=327.79  Aligned_cols=245  Identities=30%  Similarity=0.405  Sum_probs=227.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35699999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++       .++||++||..+..+.++...|
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  154 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-------WGRIISIGSVVGSAGNPGQTNY  154 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCTHHHHCCTTCHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CeEEEEEcchhhccCCCCcHHH
Confidence            999999999998888888899999999999999999999999999999876       6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|++.|+++++.|++ ++||++|+|+||+++|++. ... .++.........|.+++.+|+|+|++++||+++...
T Consensus       155 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~-~~~-~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~  231 (247)
T 3lyl_A          155 CAAKAGVIGFSKSLAYEVA-SRNITVNVVAPGFIATDMT-DKL-TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAK  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTT-TTS-CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCcEecccc-hhc-cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcC
Confidence            9999999999999999997 8899999999999986643 333 344556667788999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|++|++|||+++
T Consensus       232 ~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          232 YITGQTLHVNGGMYM  246 (247)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CccCCEEEECCCEec
Confidence            999999999999976

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3e-48  Score=336.25  Aligned_cols=244  Identities=30%  Similarity=0.403  Sum_probs=219.3

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ....|+||++|||||++|||+++|++|+++|++|++++++ .+.++.+.+++.+.+.++.++.+|++++++++++++++.
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETV  104 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3346889999999999999999999999999999998654 567888888888888899999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-CC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-SW  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-~~  165 (299)
                      +.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++         .|+||++||..+..+ .+
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---------~g~iv~isS~~~~~~~~~  175 (271)
T 3v2g_A          105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---------GGRIITIGSNLAELVPWP  175 (271)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---------TCEEEEECCGGGTCCCST
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---------CCEEEEEeChhhccCCCC
Confidence            99999999999999988888899999999999999999999999999999854         589999999877655 78


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|+++|+++++.|++ ++||+||+|+||+++|++....   .+..+......|.+++.+|+|+|++++||+
T Consensus       176 ~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~r~~~pedvA~~v~fL~  251 (271)
T 3v2g_A          176 GISLYSASKAALAGLTKGLARDLG-PRGITVNIVHPGSTDTDMNPAD---GDHAEAQRERIATGSYGEPQDIAGLVAWLA  251 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSSSSCSS---CSSHHHHHHTCTTSSCBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCCCcCCccccc---chhHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            899999999999999999999997 8899999999999987654332   223345567789999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccc
Q 022335          246 SDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~  264 (299)
                      ++...++||++|.+|||+.
T Consensus       252 s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          252 GPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CcccCCccCCEEEeCcCcc
Confidence            9999999999999999975

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.6e-48  Score=335.88  Aligned_cols=251  Identities=25%  Similarity=0.390  Sum_probs=208.8

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +..|+||++|||||++|||++++++|+++|++|+++ .++.+..+...+++...+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999998 6677778888888888788899999999999999999999999


Q ss_pred             HcCCccEEEEcCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCC
Q 022335           88 HFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASW  165 (299)
Q Consensus        88 ~~g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~  165 (299)
                      ++|++|+||||||+. ...++.+.+.++|++++++|+.++++++++++|.|++         .|+||++||..+. .+.+
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~  153 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---------GGAIVTFSSQAGRDGGGP  153 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEECCHHHHHCCST
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCEEEEEcCHHhccCCCC
Confidence            999999999999987 5578889999999999999999999999999999865         4899999999998 7888


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|+++|+++++.|++ ++ |+||+|+||+++|++.. ....++..+......|.+++.+|+|+|++++||+
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~-~~-I~vn~v~PG~v~T~~~~-~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~  230 (259)
T 3edm_A          154 GALAYATSKGAVMTFTRGLAKEVG-PK-IRVNAVCPGMISTTFHD-TFTKPEVRERVAGATSLKREGSSEDVAGLVAFLA  230 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEEEECCCcCcccc-cccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            999999999999999999999996 65 99999999999866443 3333445556667789999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccCCCCCC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLSRPRHL  271 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~~~~~~  271 (299)
                      ++...++||++|.+|||+..+.+..-
T Consensus       231 s~~~~~itG~~i~vdGg~~~~~~~~~  256 (259)
T 3edm_A          231 SDDAAYVTGACYDINGGVLFSEGHHH  256 (259)
T ss_dssp             SGGGTTCCSCEEEESBCSSBC-----
T ss_pred             CccccCccCCEEEECCCcCCCCCCCC
Confidence            99999999999999999998776543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5e-48  Score=336.43  Aligned_cols=250  Identities=24%  Similarity=0.369  Sum_probs=203.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..+++|++|||||++|||+++|++|+++|++|++++| +.+.++.+.+++...+.++.++.+|++++++++++++++.+.
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999995 778888888899888889999999999999999999999999


Q ss_pred             cCCccEEEEcCCC--CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           89 FGKLDILVNAAAG--NFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        89 ~g~id~lv~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +|++|+||||||+  ....++.+.+.++|++++++|+.++++++++++|.|.++...    ..|+||++||..+..+.++
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~----~~g~Iv~isS~~~~~~~~~  180 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR----ASRSIINITSVSAVMTSPE  180 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC----CCEEEEEECCC-------C
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC----CCCEEEEEcchhhccCCCC
Confidence            9999999999998  445778889999999999999999999999999999886421    1589999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh-cCCCCCCCCHHHHHHHHHHHc
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD-YMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~  245 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... ... ........ ..|.+++.+|+|+|++++||+
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~-~~~-~~~~~~~~~~~p~~r~~~pedvA~~v~~L~  257 (280)
T 4da9_A          181 RLDYCMSKAGLAAFSQGLALRLA-ETGIAVFEVRPGIIRSDMTAA-VSG-KYDGLIESGLVPMRRWGEPEDIGNIVAGLA  257 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEeecCCcCCchhh-cch-hHHHHHhhcCCCcCCcCCHHHHHHHHHHHh
Confidence            99999999999999999999997 889999999999998765432 222 22222223 678899999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++.+.++||++|.+|||+.+.
T Consensus       258 s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          258 GGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             TSTTGGGTTCEEEESTTCC--
T ss_pred             CccccCCCCCEEEECCCcccC
Confidence            999999999999999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=6.5e-49  Score=341.12  Aligned_cols=245  Identities=22%  Similarity=0.302  Sum_probs=220.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+.++.++.+|+++.++++++++++.+. 
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4688999999999999999999999999999999999999999999999888889999999999999999999999887 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++       .|+||++||..+..+.+....
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~Iv~isS~~~~~~~~~~~~  180 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-------WGRVVSIGSINQLRPKSVVTA  180 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTBHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEECCHHhCCCCCCchh
Confidence            9999999999998888888999999999999999999999999999999876       799999999999999888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-CchHHhHHHHhc-CCCCCCCCHHHHHHHHHHHcCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDY-MPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |++||+|+++|+++++.|++ ++||+||+|+||+++|++..... ..++........ .|++++.+|+|+|++++||+++
T Consensus       181 Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~  259 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFA-GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASE  259 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCc
Confidence            99999999999999999997 88999999999999865422111 012222333333 3899999999999999999999


Q ss_pred             CCCCccCcEEEeCCcc
Q 022335          248 TGKYVNGTTLIVDGGL  263 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~  263 (299)
                      .+.++||++|.+|||+
T Consensus       260 ~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          260 ACSFMTGETIFLTGGY  275 (275)
T ss_dssp             GGTTCCSCEEEESSCC
T ss_pred             ccCCCCCCEEEeCCCC
Confidence            9999999999999995

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2e-48  Score=341.22  Aligned_cols=249  Identities=30%  Similarity=0.399  Sum_probs=222.0

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC--hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR--KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      +.+..|+||++|||||++|||++++++|+++|++|++++|+  ....+.+.+++...+.++.++.+|+++++++++++++
T Consensus        42 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence            34557899999999999999999999999999999999987  3456677777777788899999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           85 TFEHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      +.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|.+         +|+||++||..+..+
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------~g~Iv~isS~~~~~~  192 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---------GASIITTSSIQAYQP  192 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---------TCEEEEECCGGGTSC
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---------CCEEEEECChhhccC
Confidence            9999999999999999865 467888999999999999999999999999998853         489999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++.......++....+....|.+++.+|+|+|++++|
T Consensus       193 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~  271 (294)
T 3r3s_A          193 SPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVY  271 (294)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999997 88999999999999876533322334444556677899999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+++...++||++|.+|||+++
T Consensus       272 L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          272 LASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCccccCCCCCEEEECCCccC
Confidence            9999999999999999999876

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=5.3e-49  Score=339.41  Aligned_cols=257  Identities=25%  Similarity=0.321  Sum_probs=210.7

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC---hhHHHHHHHHHHhcCCcEEEEEcCCCCHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR---KQVLDAAVSALRSLGIKAVGFEGDVRRQEH   77 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~   77 (299)
                      ||+...   .+|+||++|||||++|||+++|++|+++|++|++++|.   .+.++++.+++...+.++.++.+|++++++
T Consensus         1 m~~~~~---~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~   77 (262)
T 3ksu_A            1 MSLTKY---HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEE   77 (262)
T ss_dssp             ---CCC---SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHH
T ss_pred             CCCccc---cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            555443   45789999999999999999999999999999998764   456778888888778899999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++         .|+||++||
T Consensus        78 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---------~g~iv~isS  148 (262)
T 3ksu_A           78 VAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---------NGHIITIAT  148 (262)
T ss_dssp             HHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---------EEEEEEECC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---------CCEEEEEec
Confidence            99999999999999999999999988888889999999999999999999999999999832         589999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHH
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      ..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... ...++.........|.+++.+|+|+
T Consensus       149 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~r~~~pedv  226 (262)
T 3ksu_A          149 SLLAAYTGFYSTYAGNKAPVEHYTRAASKELM-KQQISVNAIAPGPMDTSFFYG-QETKESTAFHKSQAMGNQLTKIEDI  226 (262)
T ss_dssp             CHHHHHHCCCCC-----CHHHHHHHHHHHHTT-TTTCEEEEEEECCCCTHHHHT-CC------------CCCCSCCGGGT
T ss_pred             hhhccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCccccc-cCchHHHHHHHhcCcccCCCCHHHH
Confidence            99999999999999999999999999999997 889999999999998664332 2233344455666788999999999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCc
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLP  272 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~  272 (299)
                      |++++||+++ ..++||++|.+|||+....+...+
T Consensus       227 A~~v~~L~s~-~~~itG~~i~vdGg~~~~~~~~~~  260 (262)
T 3ksu_A          227 APIIKFLTTD-GWWINGQTIFANGGYTTREGHHHH  260 (262)
T ss_dssp             HHHHHHHHTT-TTTCCSCEEEESTTCCCC------
T ss_pred             HHHHHHHcCC-CCCccCCEEEECCCccCCCccccc
Confidence            9999999999 899999999999999987765544

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-48  Score=333.49  Aligned_cols=256  Identities=30%  Similarity=0.409  Sum_probs=220.1

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHA   78 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v   78 (299)
                      |+.+++. ...|++|++|||||++|||++++++|+++|++|++++|+++.++++.+++.+.  +.++.++.+|+++++++
T Consensus         1 m~~~~~~-~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   79 (267)
T 1iy8_A            1 MTATSSP-TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQV   79 (267)
T ss_dssp             ----------CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHH
T ss_pred             CCCCCCC-CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHH
Confidence            4444433 34588999999999999999999999999999999999999888888888665  66899999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +++++++.+.+|++|+||||||+... .++.+.+.++|++++++|+.++++++++++|.|++++       .++||++||
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS  152 (267)
T 1iy8_A           80 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-------SGMVVNTAS  152 (267)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CCEEEEEcc
Confidence            99999999999999999999998766 6778889999999999999999999999999999876       689999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--C-Cc---hHHhHHHHhcCCCCCC
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--L-AP---DEINSKARDYMPLYKL  231 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--~-~~---~~~~~~~~~~~~~~~~  231 (299)
                      ..+..+.++...|++||+|++.|+++++.|++ ++||+||+|+||+++|++....  . .+   ....+.+....|.+++
T Consensus       153 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  231 (267)
T 1iy8_A          153 VGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRY  231 (267)
T ss_dssp             GGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSC
T ss_pred             hhhccCCCCCccHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCC
Confidence            99999999999999999999999999999997 8899999999999986542210  0 01   1111144556788999


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       232 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+|+|+|++++||+++...+++|+.+.+|||+.+
T Consensus       232 ~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          232 GEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             cCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            9999999999999999889999999999999865

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.5e-47  Score=327.99  Aligned_cols=249  Identities=27%  Similarity=0.382  Sum_probs=217.7

Q ss_pred             CcCCCCCCEEEEecCC-ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGG-SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         8 ~~~~l~~k~vlItGas-~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ++..++||++|||||+ +|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++++++++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            3456899999999997 599999999999999999999999999999999987664 68999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+++..      .++||++||..+..+.+
T Consensus        96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~  169 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH------GGVIVNNASVLGWRAQH  169 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC------CEEEEEECCGGGTCCCT
T ss_pred             HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CeEEEEeCCHHHcCCCC
Confidence            999999999999999988888889999999999999999999999999999998631      68999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|++.|+++++.|++ ++||+||+|+||+++|++.. ....++..+......+.+++.+|+|+|++++||+
T Consensus       170 ~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~  247 (266)
T 3o38_A          170 SQSHYAAAKAGVMALTRCSAIEAV-EFGVRINAVSPSIARHKFLE-KTSSSELLDRLASDEAFGRAAEPWEVAATIAFLA  247 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeCCcccchhhh-ccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence            999999999999999999999997 88999999999999866543 3334455566677788999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccc
Q 022335          246 SDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~  264 (299)
                      ++...+++|++|.+|||++
T Consensus       248 s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          248 SDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             SGGGTTCCSCEEEESSCCC
T ss_pred             CccccCccCCEEEEcCCcC
Confidence            9999999999999999975

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.6e-47  Score=329.77  Aligned_cols=258  Identities=27%  Similarity=0.380  Sum_probs=222.0

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      |+.........|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.+++++
T Consensus         1 m~~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~   80 (260)
T 2zat_A            1 MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRER   80 (260)
T ss_dssp             ---------CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCcccccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            55555556667899999999999999999999999999999999999998888888887777789999999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc
Q 022335           81 VVESTFEHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL  159 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~  159 (299)
                      +++++.+.+|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..
T Consensus        81 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~  153 (260)
T 2zat_A           81 LVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-------GGSVLIVSSVG  153 (260)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEEechh
Confidence            99999999999999999999864 36777889999999999999999999999999998875       68999999999


Q ss_pred             ccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHH
Q 022335          160 HYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       160 ~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  239 (299)
                      +..+.++...|++||++++.|+++++.|++ ++||++|+|+||+++|+........+..........|.+++.+|+|+|+
T Consensus       154 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  232 (260)
T 2zat_A          154 AYHPFPNLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAG  232 (260)
T ss_dssp             GTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHH
T ss_pred             hcCCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence            999999999999999999999999999997 8899999999999987643211112222333445568889999999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +++||+++...+++|+.+.+|||+...
T Consensus       233 ~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          233 IVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHcCcccCCccCCEEEECCCcccc
Confidence            999999998899999999999998653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.5e-47  Score=335.49  Aligned_cols=250  Identities=26%  Similarity=0.440  Sum_probs=218.9

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEcCCCCH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR------------KQVLDAAVSALRSLGIKAVGFEGDVRRQ   75 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   75 (299)
                      .+..|+||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++++
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            3557899999999999999999999999999999999886            6777888888888888999999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      ++++++++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.++..      .|+||++
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~------~g~Iv~i  193 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ------GGSVIFV  193 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS------CEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC------CCEEEEE
Confidence            9999999999999999999999999988888999999999999999999999999999999988642      5899999


Q ss_pred             ccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---------C---CCchHHhHH--
Q 022335          156 SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---------K---LAPDEINSK--  221 (299)
Q Consensus       156 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---------~---~~~~~~~~~--  221 (299)
                      ||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++...         .   ...++..+.  
T Consensus       194 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (317)
T 3oec_A          194 SSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVG-RHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS  272 (317)
T ss_dssp             CCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHT
T ss_pred             CcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHh
Confidence            9999999999999999999999999999999997 889999999999998764211         0   111111111  


Q ss_pred             HHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          222 ARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       222 ~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .....| .++.+|+|+|++++||+|+.+.++||++|.+|||+.+
T Consensus       273 ~~~~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          273 QLTLLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             TTCSSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhccCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence            122234 6788999999999999999999999999999999876

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.1e-47  Score=325.41  Aligned_cols=243  Identities=33%  Similarity=0.477  Sum_probs=220.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      |++|++|||||++|||++++++|+++|++|++++| +++.++++.+++...+.++.++.+|++++++++++++++.+.+|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999 88888888888877777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...|
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  154 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-------HGRIVNIASVVGVTGNPGQANY  154 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCTHHHHCCTTBHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEECCHHhcCCCCCCchH
Confidence            999999999988777788899999999999999999999999999998875       6999999999999898999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|++.|+++++.|++ ++||++|+|+||+++|++.. ... +..........|.+++.+|+|+|+++++|+++...
T Consensus       155 ~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~  231 (246)
T 2uvd_A          155 VAAKAGVIGLTKTSAKELA-SRNITVNAIAPGFIATDMTD-VLD-ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSK  231 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCSS-CCC-TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeccccCcchh-hcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999999997 88999999999999876433 222 23334445567888999999999999999998889


Q ss_pred             CccCcEEEeCCccc
Q 022335          251 YVNGTTLIVDGGLW  264 (299)
Q Consensus       251 ~~~G~~i~~dgg~~  264 (299)
                      +++|+.+.+|||+.
T Consensus       232 ~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          232 YITGQTLNVDGGMV  245 (246)
T ss_dssp             TCCSCEEEESTTSC
T ss_pred             CCCCCEEEECcCcc
Confidence            99999999999975

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.5e-47  Score=330.55  Aligned_cols=249  Identities=31%  Similarity=0.412  Sum_probs=220.0

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .....++||++|||||++|||+++|++|+++|++|++++| +.+..+.+.+++...+.++.++.+|++++++++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            3445688999999999999999999999999999999999 566677778888887889999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.++++|+||||||+....++.+.+.++|++.+++|+.+++++++.++|.|++++       .++||++||..+..+.+
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  174 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-------FGSVVNVASIIGERGNM  174 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHHCCT
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-------CCEEEEEechhhcCCCC
Confidence            99999999999999998888888899999999999999999999999999999876       69999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|++.|+++++.|++ .+||++|+|+||+++|++.. .. .++.........|.+++.+|+|+|++++||+
T Consensus       175 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~-~~-~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~  251 (271)
T 4iin_A          175 GQTNYSASKGGMIAMSKSFAYEGA-LRNIRFNSVTPGFIETDMNA-NL-KDELKADYVKNIPLNRLGSAKEVAEAVAFLL  251 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             CchHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcccCCchh-hh-cHHHHHHHHhcCCcCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999997 88999999999999866433 22 2334455566788999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++...+++|++|.+|||+++
T Consensus       252 s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          252 SDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             SGGGTTCCSCEEEESTTSCC
T ss_pred             CCCcCCCcCCEEEeCCCeeC
Confidence            99999999999999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.8e-47  Score=335.54  Aligned_cols=252  Identities=26%  Similarity=0.266  Sum_probs=221.0

Q ss_pred             cCCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         9 ~~~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +..|+||++|||||+|  |||+++|++|+++|++|++++|+.+..+.+.+..... +++.++.||++++++++++++++.
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHH
Confidence            4468899999999997  9999999999999999999999976655554444443 347889999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           87 EHFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +++|++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|+|++         .|+||++||..+..
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---------~g~IV~isS~~~~~  174 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---------GGSILTLSYYGAEK  174 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---------CEEEEEEECGGGTS
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------CCEEEEEEehhhcc
Confidence            999999999999998764    67788999999999999999999999999999864         48999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.+++..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+..........|++++.+|+|+|++++
T Consensus       175 ~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  253 (296)
T 3k31_A          175 VVPHYNVMGVCKAALEASVKYLAVDLG-KQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAAL  253 (296)
T ss_dssp             CCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999997 8899999999999987643322222344566677789999999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccCCCCCC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLSRPRHL  271 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~~~~~~  271 (299)
                      ||+++.+.++||++|.+|||+.+......
T Consensus       254 fL~s~~a~~itG~~i~vdGG~~~~~~~~~  282 (296)
T 3k31_A          254 YLLSDLGRGTTGETVHVDCGYHVVGMKSV  282 (296)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCSSCCC
T ss_pred             HHcCCccCCccCCEEEECCCccccCCccC
Confidence            99999999999999999999998754433

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-47  Score=329.91  Aligned_cols=251  Identities=35%  Similarity=0.515  Sum_probs=221.2

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-HhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .+...|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++ ...+.++.++.+|++++++++++++++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   93 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV   93 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            3445688999999999999999999999999999999999999888888877 445678999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc-ccccC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL-HYTAS  164 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~-~~~~~  164 (299)
                      .+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||.. +..+.
T Consensus        94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~  166 (267)
T 1vl8_A           94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-------NPSIINIGSLTVEEVTM  166 (267)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-------SCEEEEECCGGGTCCCS
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CcEEEEECCcchhccCC
Confidence            99999999999999988777888899999999999999999999999999998765       68999999998 88888


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|++.|+++++.|++ ++||++|+|+||+++|++.......++.........|.+++.+|+|+|++++||
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  245 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFL  245 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHH
Confidence            8999999999999999999999997 889999999999998764321111223334445567888999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++...+++|+.+.+|||+.+
T Consensus       246 ~s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          246 ASEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             cCccccCCcCCeEEECCCCCC
Confidence            999889999999999999763

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.9e-47  Score=333.62  Aligned_cols=250  Identities=25%  Similarity=0.238  Sum_probs=216.7

Q ss_pred             cCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         9 ~~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +..|+||++|||||+  +|||+++|++|+++|++|++++|++...+.+ +++.+...++.++.+|++++++++++++++.
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            346889999999999  5599999999999999999999996544433 3343333468899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           87 EHFGKLDILVNAAAGNF----LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +++|++|+||||||+..    ..++.+.+.++|++.+++|+.++++++++++|+|++         .|+||++||..+..
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---------~g~Iv~isS~~~~~  175 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---------GGSILTLTYYGAEK  175 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---------CEEEEEEECGGGTS
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---------CCEEEEEeehhhcc
Confidence            99999999999999876    467788999999999999999999999999999964         58999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.+++..|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......+..........|.+++.+|+|+|++++
T Consensus       176 ~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  254 (293)
T 3grk_A          176 VMPNYNVMGVAKAALEASVKYLAVDLG-PQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGL  254 (293)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHh-HhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999997 8899999999999987654433333555666777899999999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccCCCC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLSRPR  269 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~~~~  269 (299)
                      ||+++.+.++||++|.+|||+.+....
T Consensus       255 ~L~s~~~~~itG~~i~vdGG~~~~~~~  281 (293)
T 3grk_A          255 YFLSDLSRSVTGEVHHADSGYHVIGMK  281 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGBCC-
T ss_pred             HHcCccccCCcceEEEECCCcccCCCC
Confidence            999999999999999999999986543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4e-47  Score=328.94  Aligned_cols=248  Identities=25%  Similarity=0.388  Sum_probs=219.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..++++|++|||||++|||++++++|+++|++|++++ ++.+..+...+++...+.++.++.+|+++.++++++++++.+
T Consensus        20 ~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (269)
T 3gk3_A           20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLA   99 (269)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999998 666777777777777778899999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .++++|+||||||+....++.+.+.++|++++++|+.+++++++.++|.|.+++       .|+||++||..+..+.++.
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  172 (269)
T 3gk3_A          100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-------FGRIVNIGSVNGSRGAFGQ  172 (269)
T ss_dssp             HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHHCCTTB
T ss_pred             HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEeCChhhccCCCCc
Confidence            999999999999998888889999999999999999999999999999999876       6999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. ....+..........|.+++.+|+|+|++++||+++
T Consensus       173 ~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~  250 (269)
T 3gk3_A          173 ANYASAKAGIHGFTKTLALETA-KRGITVNTVSPGYLATAMVE-AVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSD  250 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTT-C-------CCSGGGCTTSSCBCHHHHHHHHHHHTST
T ss_pred             chHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCcccchhhh-hhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCC
Confidence            9999999999999999999997 88999999999999866543 332322222455678889999999999999999999


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      ...+++|++|++|||+++
T Consensus       251 ~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          251 DAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             TCTTCCSCEEEESTTSCC
T ss_pred             CcCCeeCcEEEECCCEeC
Confidence            999999999999999876

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-47  Score=329.29  Aligned_cols=244  Identities=25%  Similarity=0.455  Sum_probs=220.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++.+.+|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999999999888888877777899999999999999999999999999


Q ss_pred             CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++       .|+||++||..+..+.++...
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  156 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-------YGRIVNTASMAGVKGPPNMAA  156 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHSCCTTBHH
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcchhhccCCCCCch
Confidence            999999999987 567788889999999999999999999999999998875       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC------------CC-chH-HhHHHHhcCCCCCCCCHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK------------LA-PDE-INSKARDYMPLYKLGEKW  235 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~  235 (299)
                      |++||+|++.|+++++.|++ ++||+||+|+||+++|++....            .. .++ ..+.+....|++++.+|+
T Consensus       157 Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  235 (262)
T 1zem_A          157 YGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  235 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence            99999999999999999997 8899999999999987643211            11 222 334455667899999999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      |+|++++||+++...++||++|.+|||
T Consensus       236 dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          236 EIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            999999999999899999999999998

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=7.5e-47  Score=325.61  Aligned_cols=248  Identities=31%  Similarity=0.478  Sum_probs=222.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-   89 (299)
                      .|+||++|||||++|||++++++|+++|++|++++|+++.++.+.+++...+.++.++.+|++++++++++++++.+.+ 
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999999888888887777789999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++       .++||++||..+..+.++...
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  158 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-------RGNVVFISSVSGALAVPYEAV  158 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-------SEEEEEECCGGGTSCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcchhhccCCCCcch
Confidence            9999999999988777788889999999999999999999999999998875       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhH---HHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS---KARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      |++||++++.|+++++.|++ ++||++|+|+||+++|+........+...+   ......|.+++.+|+|+|++++||++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s  237 (260)
T 2ae2_A          159 YGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999997 889999999999998654321111222222   44566788899999999999999999


Q ss_pred             CCCCCccCcEEEeCCccccC
Q 022335          247 DTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +...+++|+.+.+|||+.+.
T Consensus       238 ~~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          238 PAASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             ccccCCCCCEEEECCCcccc
Confidence            88899999999999998753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=9.8e-47  Score=323.47  Aligned_cols=239  Identities=24%  Similarity=0.297  Sum_probs=211.7

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCC--CCHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDV--RRQEHAKKVVEST   85 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl--~~~~~v~~~~~~~   85 (299)
                      ...|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .++.++.+|+  ++.++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            446899999999999999999999999999999999999999999988887654 3789999999  9999999999999


Q ss_pred             HHHcCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           86 FEHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      .+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+..+.
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~  159 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-------AGSLVFTSSSVGRQGR  159 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-------SCEEEEECCGGGTSCC
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-------CCEEEEECChhhccCC
Confidence            999999999999999854 46888999999999999999999999999999999876       6999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++++.|++ ++ |+||+|+||+++|++..          ......+..++.+|+|+|++++||
T Consensus       160 ~~~~~Y~asK~a~~~l~~~la~e~~-~~-irvn~v~PG~v~t~~~~----------~~~~~~~~~~~~~p~dva~~~~~L  227 (252)
T 3f1l_A          160 ANWGAYAASKFATEGMMQVLADEYQ-QR-LRVNCINPGGTRTAMRA----------SAFPTEDPQKLKTPADIMPLYLWL  227 (252)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEECCSBSSHHHH----------HHCTTCCGGGSBCTGGGHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhc-CC-cEEEEEecCcccCchhh----------hhCCccchhccCCHHHHHHHHHHH
Confidence            9999999999999999999999996 65 99999999999864321          111122234578999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +++.+.++||++|.+|||+...
T Consensus       228 ~s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          228 MGDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             HSGGGTTCCSCEEESSCC----
T ss_pred             cCccccCCCCCEEEeCCCcCCC
Confidence            9999999999999999998754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.3e-47  Score=330.20  Aligned_cols=246  Identities=28%  Similarity=0.393  Sum_probs=212.0

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEcCCCCH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR------------KQVLDAAVSALRSLGIKAVGFEGDVRRQ   75 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   75 (299)
                      +...|+||++|||||++|||++++++|+++|++|++++|+            .+.++...+++...+.++.++.+|++++
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   86 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR   86 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            3456889999999999999999999999999999999987            7778888888887788999999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      ++++++++++.+.+|++|+||||||+.....    +.++|++++++|+.++++++++++|+|.++..      .|+||++
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~g~iv~i  156 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT------GGSIVLI  156 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS------CEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CcEEEEE
Confidence            9999999999999999999999999865432    58899999999999999999999999988642      5899999


Q ss_pred             ccccccccC----CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhH---------HH
Q 022335          156 SATLHYTAS----WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS---------KA  222 (299)
Q Consensus       156 sS~~~~~~~----~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~---------~~  222 (299)
                      ||..+..+.    ++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++.......+....         ..
T Consensus       157 sS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  235 (278)
T 3sx2_A          157 SSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLA-GQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM  235 (278)
T ss_dssp             CCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTT
T ss_pred             ccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHh-ccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhh
Confidence            999998877    7788999999999999999999997 889999999999998765432211111111         11


Q ss_pred             HhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          223 RDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       223 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ....| +++.+|+|+|++++||+++...++||++|.+|||+.+
T Consensus       236 ~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          236 GNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             hhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            22345 6788999999999999999999999999999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=7e-47  Score=325.80  Aligned_cols=246  Identities=28%  Similarity=0.405  Sum_probs=214.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |++|++|||||++|||++++++|+++|++|++++|+.+. ++.+.+++... +.++.++.+|++++++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999999999887 88888887665 6689999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|+++.       .++||++||..+..+.++...
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  154 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-------FGRIINIASAHGLVASANKSA  154 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCEEEEECcHHhCcCCCCCch
Confidence            9999999999987777788889999999999999999999999999998875       699999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---------hHHhHHH-HhcCCCCCCCCHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---------DEINSKA-RDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~dva~  239 (299)
                      |++||++++.|+++++.|++ ++||++|+|+||+++|++.......         ++....+ ....|.+++.+|+|+|+
T Consensus       155 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~  233 (260)
T 1x1t_A          155 YVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGG  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc-cCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHH
Confidence            99999999999999999997 8899999999999987654322110         1222222 44568889999999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++||+++...+++|+.+.+|||+.+
T Consensus       234 ~~~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          234 TAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHhChhhcCCCCCEEEECCCccC
Confidence            99999998889999999999999864

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=9.4e-47  Score=330.18  Aligned_cols=252  Identities=22%  Similarity=0.324  Sum_probs=220.0

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHH-hcCCcEEEEEcCCCCHH----------
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALR-SLGIKAVGFEGDVRRQE----------   76 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~----------   76 (299)
                      +..|++|++|||||++|||++++++|+++|++|++++ |+.+.++.+.+++. ..+.++.++.+|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            3467899999999999999999999999999999999 99999888888886 55678999999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHHhhhHHHHHHHHHHHH
Q 022335           77 -------HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLS--------------PNGFRTVMDIDSVGTFTMCHEALK  135 (299)
Q Consensus        77 -------~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  135 (299)
                             +++++++++.+.+|++|+||||||+....++.+.+              .++|+.++++|+.++++++++++|
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                   99999999999999999999999988777888888              899999999999999999999999


Q ss_pred             HHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc
Q 022335          136 YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP  215 (299)
Q Consensus       136 ~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~  215 (299)
                      .|.++... .....++||++||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++  . .. 
T Consensus       164 ~m~~~~~~-~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~--~-~~-  237 (291)
T 1e7w_A          164 RVAGTPAK-HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD--D-MP-  237 (291)
T ss_dssp             HHHTSCGG-GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG--G-SC-
T ss_pred             HHHhcCCC-CCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCccCCc--c-CC-
Confidence            99875310 011138999999999999999999999999999999999999997 889999999999998765  2 32 


Q ss_pred             hHHhHHHHhcCCCC-CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          216 DEINSKARDYMPLY-KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       216 ~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++..+.+....|++ ++.+|+|+|++++||+++...+++|+++.+|||+.+.
T Consensus       238 ~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          238 PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            44445556667888 8999999999999999998999999999999998764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-47  Score=326.19  Aligned_cols=250  Identities=23%  Similarity=0.356  Sum_probs=223.2

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      +.+...+++|++|||||++|||+++|++|+++|++|++++ |+.+..+...+++...+.++.++.+|+++.+++++++++
T Consensus         5 ~~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            5 HHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             --------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHH
Confidence            4445578899999999999999999999999999999988 667777888888888788899999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+.++++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++       .++||++||..+..+.
T Consensus        85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~  157 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-------WGRIINISSVNGQKGQ  157 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCCCGGGSC
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEEcchhhccCC
Confidence            999999999999999998888889999999999999999999999999999999876       6999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++++.|++ ++||++|+|+||+++|++.. .. .++..+......|.+++.+|+|+|++++||
T Consensus       158 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  234 (256)
T 3ezl_A          158 FGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVK-AI-RPDVLEKIVATIPVRRLGSPDEIGSIVAWL  234 (256)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TS-CHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEEECcccCcccc-cc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999997 88999999999999866432 22 345556667778999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++...+++|+++.+|||+++
T Consensus       235 ~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          235 ASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESTTSCC
T ss_pred             hCCcccCCcCcEEEECCCEeC
Confidence            999999999999999999876

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.2e-47  Score=327.43  Aligned_cols=247  Identities=24%  Similarity=0.350  Sum_probs=201.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.+|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            477999999999999999999999999999999999998877776665   45789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCC----CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           91 KLDILVNAAAGNFLVSAE----DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      ++|+||||||+.....+.    +.+.++|++.+++|+.++++++++++|+|+++.+. .....|+||++||..+..+.++
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-~~~~~g~iv~isS~~~~~~~~~  159 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPD-ADGERGVIVNTASIAAFDGQIG  159 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC-TTSCCEEEEEECCTHHHHCCTT
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc-CCCCCeEEEEEechhhccCCCC
Confidence            999999999987655443    67889999999999999999999999999875321 1112689999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHHHc
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYLT  245 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  245 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. .++..+......|. +++.+|+|+|++++||+
T Consensus       160 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~  236 (257)
T 3tpc_A          160 QAAYAASKGGVAALTLPAARELA-RFGIRVVTIAPGIFDTPMMA-GM-PQDVQDALAASVPFPPRLGRAEEYAALVKHIC  236 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEeCCCCChhhc-cC-CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHc
Confidence            99999999999999999999997 88999999999999876543 22 23344555667787 89999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++  .+++|++|.+|||+++.
T Consensus       237 s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          237 EN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HC--TTCCSCEEEESTTCCC-
T ss_pred             cc--CCcCCcEEEECCCccCC
Confidence            75  78999999999999874

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.3e-47  Score=331.53  Aligned_cols=264  Identities=25%  Similarity=0.262  Sum_probs=228.8

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +|+||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+++.++.+|++++++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999  99999999999999999999999986 45555556543335788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 FGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +|++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|.|++         +|+||++||..+..+.
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---------GASVLTLSYLGSTKYM  152 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEEECGGGTSBC
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---------CCEEEEEecchhcCCC
Confidence            9999999999998754    56778899999999999999999999999999853         4899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++....+....|.+++.+|+|+|++++||
T Consensus       153 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l  231 (275)
T 2pd4_A          153 AHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYL  231 (275)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999997 889999999999998765332212233444455667888999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc--CCCCCCchhHHHHHhHhhhh
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL--SRPRHLPKDAVKQLSRTVEK  285 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~--~~~~~~~~~~~~~~~~~~~~  285 (299)
                      +++...+++|+.+.+|||+.+  ..+...++...+++|+.+++
T Consensus       232 ~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          232 LSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             hCccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            998889999999999999987  45666778889999998765

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.6e-46  Score=323.57  Aligned_cols=251  Identities=31%  Similarity=0.414  Sum_probs=209.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++|++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++.+|+++.++++++++++.+++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999999888877765   5579999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|.++...   ...++||++||..+..+.++..
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~---~~~~~iv~isS~~~~~~~~~~~  158 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAK---GQECVILNVASTGAGRPRPNLA  158 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT---TCCEEEEEECCTTTTSCCTTCH
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC---CCCeEEEEeCchhhcCCCCCcc
Confidence            99999999999876 4677788999999999999999999999999999876310   1147899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--CchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--APDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|+......  ..++..+.+....|.+++.+|+|+|++++||++
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  237 (261)
T 3n74_A          159 WYNATKGWVVSVTKALAIELA-PAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999997 88999999999999876544332  233445566677899999999999999999999


Q ss_pred             CCCCCccCcEEEeCCccccCC
Q 022335          247 DTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +...+++|++|.+|||+++..
T Consensus       238 ~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          238 PQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             GGGTTCCSCEEEESTTTTC--
T ss_pred             CcccCcCCcEEEecCCcccCC
Confidence            999999999999999998854

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=6.6e-47  Score=325.60  Aligned_cols=244  Identities=23%  Similarity=0.304  Sum_probs=218.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV--LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  ++++.+++...+.++.++.+|++++++++++++++.+.+|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999999887  78888888776778999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCC-ceEEEeccccccccCCCchHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGG-GSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       . ++||++||..+..+.++...|
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~~g~iv~isS~~~~~~~~~~~~Y  154 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-------VKGKIINAASIAAIQGFPILSAY  154 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCCEEEEECCGGGTSCCTTCHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-------CCcEEEEECcchhccCCCCchhH
Confidence            99999999988777888899999999999999999999999999998865       4 899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-------Cc--hHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-------AP--DEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ++||++++.|+++++.|++ ++||+||+|+||+++|++.....       ..  ++..+.+....|.+++.+|+|+|+++
T Consensus       155 ~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  233 (258)
T 3a28_C          155 STTKFAVRGLTQAAAQELA-PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-hhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            9999999999999999997 88999999999999876432111       01  23334445567888999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|+.+.+|||+.+
T Consensus       234 ~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          234 SFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             HHHhCcccCCCCCCEEEECCCEec
Confidence            999999889999999999999764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.4e-46  Score=324.36  Aligned_cols=246  Identities=27%  Similarity=0.407  Sum_probs=219.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      |++|++|||||++|||++++++|+++|++|++++|+++.++.+.+++... +.++.++.+|++++++++++++++.+.+|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67999999999999999999999999999999999999888888888665 67899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...|
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  157 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-------GGAIIHNASICAVQPLWYEPIY  157 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTCHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEECchhhcCCCCCcchH
Confidence            999999999988778888999999999999999999999999999998875       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchHHhHHHHhc-CCCCCCCCHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDEINSKARDY-MPLYKLGEKWDIAMA  240 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~dva~~  240 (299)
                      ++||+|++.|+++++.|++ ++||++|+|+||+++|+......         ..++........ .|.+++.+|+|+|++
T Consensus       158 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~  236 (263)
T 3ai3_A          158 NVTKAALMMFSKTLATEVI-KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANF  236 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHH
Confidence            9999999999999999997 88999999999999875421110         012222333344 788899999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCcccc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++|+++...+++|+.+.+|||+.+
T Consensus       237 ~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          237 FVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             HHHHcCccccCCCCcEEEECCCccc
Confidence            9999999889999999999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=9.8e-47  Score=326.43  Aligned_cols=248  Identities=27%  Similarity=0.414  Sum_probs=217.8

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +.+...++||++|||||++|||+++|++|+++|++|++++|+.+..          ...+..+.+|++++++++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHH
Confidence            4455678999999999999999999999999999999999987532          225778999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|+++.       .|+||++||..+..+.+
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~  148 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-------HGSIINIASVQSYAATK  148 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSBCT
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CCEEEEECchhhccCCC
Confidence            99999999999999998878888899999999999999999999999999999876       79999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHHHhcCCCCCCCCHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                      +...|++||+|+++|+++++.|++ + ||+||+|+||+++|++....         ...++..+.+....|.+++.+|+|
T Consensus       149 ~~~~Y~asKaa~~~l~~~la~e~~-~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  226 (269)
T 3vtz_A          149 NAAAYVTSKHALLGLTRSVAIDYA-P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEE  226 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHT-T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhc-C-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHH
Confidence            999999999999999999999996 7 89999999999987542111         001344456667789999999999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLP  272 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~  272 (299)
                      +|++++||+++.+.++||++|.+|||+....+...|
T Consensus       227 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~p  262 (269)
T 3vtz_A          227 VAEVVAFLASDRSSFITGACLTVDGGLLSKLPISTP  262 (269)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGBCCCCCC
T ss_pred             HHHHHHHHhCCccCCCcCcEEEECCCccccCCCCCC
Confidence            999999999999999999999999999988776655

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.4e-46  Score=323.69  Aligned_cols=244  Identities=26%  Similarity=0.337  Sum_probs=214.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +..+.++.+|++++++++++++    +
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~   82 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----K   82 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----H
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----h
Confidence            578999999999999999999999999999999999999999999988765  3568889999999999877654    5


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+..+.++..
T Consensus        83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~  155 (267)
T 3t4x_A           83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-------EGRVIFIASEAAIMPSQEMA  155 (267)
T ss_dssp             CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------EEEEEEECCGGGTSCCTTCH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CCEEEEEcchhhccCCCcch
Confidence            79999999999998888888999999999999999999999999999999876       69999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---------CCCchHHhH----HHHhcCCCCCCCCHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---------KLAPDEINS----KARDYMPLYKLGEKW  235 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---------~~~~~~~~~----~~~~~~~~~~~~~~~  235 (299)
                      .|++||+|+++|+++++.|++ ++||+||+|+||+++|+....         ....++...    ......|++++.+|+
T Consensus       156 ~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe  234 (267)
T 3t4x_A          156 HYSATKTMQLSLSRSLAELTT-GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPE  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTH
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHH
Confidence            999999999999999999997 889999999999998753211         111122222    222345789999999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+|++++||+|+.+.++||++|.+|||+...
T Consensus       235 dvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          235 EIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            9999999999999999999999999998764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.2e-46  Score=327.03  Aligned_cols=250  Identities=26%  Similarity=0.398  Sum_probs=218.2

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +..|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+ ++.++.+|++++++++++++++.+.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            345789999999999999999999999999999999999988888888886544 7899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++...   ...++||++||..+..+.++..
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~---~~~g~iV~isS~~~~~~~~~~~  179 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA---ENPARVINIGSVAGISAMGEQA  179 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS---SSCEEEEEECCGGGTCCCCCSC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC---CCCCEEEEECCHHHcCCCCCCc
Confidence            9999999999998877788889999999999999999999999999999876510   0128999999999998888888


Q ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh--cCCCCCCCCHHHHHHHHHHHc
Q 022335          169 -HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD--YMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       169 -~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~  245 (299)
                       .|++||+|++.|+++++.|++ ++||+||+|+||+++|++.....  .........  ..|.+++.+|+|+|++++||+
T Consensus       180 ~~Y~asK~a~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~  256 (276)
T 2b4q_A          180 YAYGPSKAALHQLSRMLAKELV-GEHINVNVIAPGRFPSRMTRHIA--NDPQALEADSASIPMGRWGRPEEMAALAISLA  256 (276)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSTTTHHHH--HCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCcCcchhhcc--hhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHh
Confidence             999999999999999999997 88999999999999876432110  011223333  678889999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++...+++|++|.+|||+.+
T Consensus       257 s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          257 GTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCCCCEEEeCCCccC
Confidence            98889999999999999753

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.4e-46  Score=320.43  Aligned_cols=242  Identities=30%  Similarity=0.424  Sum_probs=207.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|++ +.+++   ++.+.+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            46799999999999999999999999999999999998 66554   444556789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  153 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-------WGRIINLTSTTYWLKIEAYTH  153 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGGSCCSSCHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CeEEEEEcchhhccCCCCchh
Confidence            9999999999988777788899999999999999999999999999999876       699999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch--HHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD--EINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      |++||+|++.|+++++.|++ ++||++|+|+||+++|++........  +......  .|.+++.+|+|+|++++||+++
T Consensus       154 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~  230 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASD  230 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCc
Confidence            99999999999999999997 88999999999999876533122111  1111111  5778899999999999999998


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      ...+++|+.+.+|||+..
T Consensus       231 ~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          231 DASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             GGTTCCSCEEEESSSCCC
T ss_pred             ccCCCCCcEEEECCCccC
Confidence            889999999999999764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=5.5e-47  Score=331.61  Aligned_cols=247  Identities=32%  Similarity=0.496  Sum_probs=219.9

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ...|+||++|||||++|||++++++|+++|++|++++|+.+. .+...+++...+.++.++.+|++++++++++++++.+
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999998764 4555666666678899999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           88 HFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      ++|++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|+|++         .++||++||..+..+.++
T Consensus       122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~~~~  192 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---------GDVIINTASIVAYEGNET  192 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---------TCEEEEECCTHHHHCCTT
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---------CCEEEEEechHhcCCCCC
Confidence            99999999999998654 57788899999999999999999999999998853         479999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.... ..++....+....|.+++.+|+|+|++++||++
T Consensus       193 ~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s  270 (291)
T 3ijr_A          193 LIDYSATKGAIVAFTRSLSQSLV-QKGIRVNGVAPGPIWTPLIPSS-FDEKKVSQFGSNVPMQRPGQPYELAPAYVYLAS  270 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTHHHHH-SCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCCCcCCccccc-CCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999997 8899999999999987643222 234445556677899999999999999999999


Q ss_pred             CCCCCccCcEEEeCCccccC
Q 022335          247 DTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +...++||++|.+|||+.+.
T Consensus       271 ~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          271 SDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             GGGTTCCSCEEEESSSCCCC
T ss_pred             CccCCCcCCEEEECCCcccC
Confidence            99999999999999998763

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2e-46  Score=327.13  Aligned_cols=261  Identities=24%  Similarity=0.274  Sum_probs=216.5

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|+||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+++.++.+|++++++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999985 44555555543334788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 FGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +|++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|.|.++        .|+||++||..+..+.
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~~  168 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--------NGAIVTLSYYGAEKVV  168 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--------CCEEEEEECGGGTSBC
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--------CCEEEEEccchhccCC
Confidence            9999999999998654    567788999999999999999999999999998653        4899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +++..|++||+|++.|+++++.|++ ++||+||+|+||+++|+........+..........|.+++.+|+|+|++++||
T Consensus       169 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l  247 (285)
T 2p91_A          169 PHYNVMGIAKAALESTVRYLAYDIA-KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFL  247 (285)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999997 889999999999998765322112233444455667888999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccCCCCCCchhHHHHHhH
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLSRPRHLPKDAVKQLSR  281 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~~~~~~~~  281 (299)
                      +++...+++|+++.+|||+.+..+...++...+++|+
T Consensus       248 ~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~lw~  284 (285)
T 2p91_A          248 CSDWARAITGEVVHVDNGYHIMGVFGREEEIKKEVYG  284 (285)
T ss_dssp             TSGGGTTCCSCEEEESTTGGGBSCC------------
T ss_pred             cCCcccCCCCCEEEECCCcccccccCChHHHHHHhcC
Confidence            9988899999999999999998888788888888885

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.6e-46  Score=324.93  Aligned_cols=244  Identities=26%  Similarity=0.364  Sum_probs=211.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++.+.+|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            367999999999999999999999999999999999998877765543   56899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCC-CC----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           91 KLDILVNAAAGNFLV-SA----EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        91 ~id~lv~~ag~~~~~-~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      ++|+||||||+.... .+    .+.+.++|++++++|+.++++++++++|+|.++        +|+||++||..+..+.+
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~  150 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--------RGSVVFTISNAGFYPNG  150 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCGGGTSSSS
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--------CCeEEEEecchhccCCC
Confidence            999999999986432 22    244567899999999999999999999999875        48999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--------CchHHhHHHHhcCCCCCCCCHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--------APDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      +...|++||+|+++|+++++.|++ ++ |+||+|+||+++|++.....        ......+......|++++.+|+|+
T Consensus       151 ~~~~Y~asKaa~~~l~~~la~e~~-~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  228 (281)
T 3zv4_A          151 GGPLYTATKHAVVGLVRQMAFELA-PH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEY  228 (281)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGG
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhc-CC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHH
Confidence            999999999999999999999997 75 99999999999877543211        111234566778899999999999


Q ss_pred             HHHHHHHcC-CCCCCccCcEEEeCCccccCC
Q 022335          238 AMAALYLTS-DTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       238 a~~~~~l~s-~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      |++++||+| +.+.++||++|.+|||+++..
T Consensus       229 A~~v~fL~s~~~~~~itG~~i~vdGG~~~~~  259 (281)
T 3zv4_A          229 TGAYVFFATRGDSLPATGALLNYDGGMGVRG  259 (281)
T ss_dssp             SHHHHHHHSTTTSTTCSSCEEEESSSGGGCC
T ss_pred             HHHHHHhhcccccccccCcEEEECCCCcccc
Confidence            999999999 788899999999999998854

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.5e-47  Score=331.43  Aligned_cols=247  Identities=29%  Similarity=0.352  Sum_probs=213.7

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHhcCCcEEEEEcCCC
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR------------KQVLDAAVSALRSLGIKAVGFEGDVR   73 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dl~   73 (299)
                      |.++..|+||++|||||++|||+++|++|+++|++|++++|+            .+.++....++...+.++.++.+|++
T Consensus         2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   81 (287)
T 3pxx_A            2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR   81 (287)
T ss_dssp             TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT
T ss_pred             CCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC
Confidence            556778999999999999999999999999999999999998            77788888888877889999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSIL  153 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv  153 (299)
                      ++++++++++++.+.+|++|+||||||+....  .+.+.++|++.+++|+.++++++++++|+|.  .       .++||
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-------~g~iv  150 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--S-------GASII  150 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--T-------TCEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--c-------CcEEE
Confidence            99999999999999999999999999987554  3378899999999999999999999999982  2       58999


Q ss_pred             EeccccccccC-----------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------
Q 022335          154 NISATLHYTAS-----------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------  213 (299)
Q Consensus       154 ~vsS~~~~~~~-----------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------  213 (299)
                      ++||..+..+.           ++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++.....         
T Consensus       151 ~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~  229 (287)
T 3pxx_A          151 TTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPDL  229 (287)
T ss_dssp             EECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESSBSSTTTSSHHHHHHHCTTS
T ss_pred             EeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCccccccccccchhhhhcccc
Confidence            99999887765           6788999999999999999999997 88999999999999877543210         


Q ss_pred             CchHH---hHH--HHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          214 APDEI---NSK--ARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       214 ~~~~~---~~~--~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .....   ...  .....| +++.+|+|+|++++||+|+.+.++||++|.+|||+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          230 EAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             SSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            00111   111  223344 7889999999999999999999999999999999876

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-46  Score=316.74  Aligned_cols=239  Identities=31%  Similarity=0.442  Sum_probs=213.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +  +.++.+|++++++++++++++.+.+|+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            56999999999999999999999999999999999988777665443   2  788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||.. ..+.++...|+
T Consensus        78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~-~~~~~~~~~Y~  149 (245)
T 1uls_A           78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-------PGSIVLTASRV-YLGNLGQANYA  149 (245)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------CEEEEEECCGG-GGCCTTCHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CCEEEEEccch-hcCCCCchhHH
Confidence            99999999988777788899999999999999999999999999998765       69999999998 88888899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +||+|++.|+++++.|++ ++||++|+|+||+++|++.. .. .++.........|.+++.+|+|+|++++||+++...+
T Consensus       150 asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~  226 (245)
T 1uls_A          150 ASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMTA-KV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSF  226 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTS-SS-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCcCcchh-hc-CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999997 88999999999999876533 33 2334444556678889999999999999999988899


Q ss_pred             ccCcEEEeCCccccC
Q 022335          252 VNGTTLIVDGGLWLS  266 (299)
Q Consensus       252 ~~G~~i~~dgg~~~~  266 (299)
                      ++|+.+.+|||+.+.
T Consensus       227 ~tG~~~~vdgG~~~~  241 (245)
T 1uls_A          227 ITGQVLFVDGGRTIG  241 (245)
T ss_dssp             CCSCEEEESTTTTTT
T ss_pred             CcCCEEEECCCcccC
Confidence            999999999998763

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=3.6e-46  Score=321.38  Aligned_cols=246  Identities=22%  Similarity=0.344  Sum_probs=214.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+++.++.+.+++...  +.++.++.+|++++++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            367999999999999999999999999999999999999888888888653  337899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +| +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++.       .++||++||..+..+.++..
T Consensus        84 ~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~  155 (260)
T 2z1n_A           84 GG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-------WGRMVYIGSVTLLRPWQDLA  155 (260)
T ss_dssp             TC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTBH
T ss_pred             cC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEECchhhcCCCCCCc
Confidence            99 99999999987777888899999999999999999999999999998876       69999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---------CCCchHHhHHHHhcCCCCCCCCHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---------KLAPDEINSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~  239 (299)
                      .|++||+|++.++++++.|++ ++||++|+|+||+++|++...         ....+.....+....|.+++.+|+|+|+
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  234 (260)
T 2z1n_A          156 LSNIMRLPVIGVVRTLALELA-PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELAS  234 (260)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHG-GGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHH
Confidence            999999999999999999997 889999999999998765431         1111111233445578889999999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++||+++...+++|+.+.+|||+.+
T Consensus       235 ~v~~l~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          235 VVAFLASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHhCccccCCCCCEEEeCCCccC
Confidence            99999999889999999999999753

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=5e-46  Score=323.14  Aligned_cols=251  Identities=26%  Similarity=0.341  Sum_probs=214.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhc-CCcEEEEEcCCCCH----HHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSL-GIKAVGFEGDVRRQ----EHAKKVVE   83 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~----~~v~~~~~   83 (299)
                      ..|++|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++... +.++.++.+|+++.    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            3468999999999999999999999999999999999 988888888888765 67899999999999    99999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceE
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSP-----------NGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSI  152 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~i  152 (299)
                      ++.+.+|++|+||||||+....++.+.+.           ++|++.+++|+.++++++++++|.|. +.. ......++|
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~-~~~~~~g~i  164 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGG-AWRSRNLSV  164 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCC-CCCCCCcEE
Confidence            99999999999999999887777778888           99999999999999999999999987 331 001113899


Q ss_pred             EEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCC-C
Q 022335          153 LNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-L  231 (299)
Q Consensus       153 v~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~  231 (299)
                      |++||..+..+.++...|++||+|++.|+++++.|++ ++||+||+|+||+++|+  . .. .++....+....|.++ +
T Consensus       165 v~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~--~-~~-~~~~~~~~~~~~p~~r~~  239 (276)
T 1mxh_A          165 VNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLP--P-AM-PQETQEEYRRKVPLGQSE  239 (276)
T ss_dssp             EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCC--S-SS-CHHHHHHHHTTCTTTSCC
T ss_pred             EEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCC--c-cC-CHHHHHHHHhcCCCCCCC
Confidence            9999999999999999999999999999999999997 88999999999999876  2 22 3344444556678888 9


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       232 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      .+|+|+|++++||+++...+++|+.+.+|||+.+.+
T Consensus       240 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  275 (276)
T 1mxh_A          240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  275 (276)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEECCchhccC
Confidence            999999999999999888999999999999987653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=3.5e-46  Score=322.43  Aligned_cols=252  Identities=20%  Similarity=0.243  Sum_probs=223.3

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+....+...+...+.+. ++.++.+|++++++++++++++.+
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            4779999999999  6699999999999999999999997665665555555544 799999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           88 HFGKLDILVNAAAGNF----LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      .++++|+||||||+..    ..++.+.+.++|+..+++|+.+++.++++++|+|++         .|+||++||..+..+
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~  154 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---------GGSIVTLTYLGGELV  154 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---------CEEEEEEECGGGTSC
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---------CceEEEEeccccccc
Confidence            9999999999999876    467778899999999999999999999999999863         589999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......++.........|.+++.+|+|+|++++|
T Consensus       155 ~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~  233 (266)
T 3oig_A          155 MPNYNVMGVAKASLDASVKYLAADLG-KENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAF  233 (266)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999997 88999999999999876544433345566677788899999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccCCCCCCc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLSRPRHLP  272 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~~~~~~~  272 (299)
                      |+++...+++|++|.+|||+....+...+
T Consensus       234 l~s~~~~~~tG~~i~vdGG~~~~~~~~~~  262 (266)
T 3oig_A          234 LFSDMSRGITGENLHVDSGFHITARLEHH  262 (266)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCCCCC--
T ss_pred             HcCCchhcCcCCEEEECCCeEEeeecCCC
Confidence            99998999999999999999997776544

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.1e-46  Score=325.72  Aligned_cols=249  Identities=27%  Similarity=0.374  Sum_probs=221.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +..|++|++|||||++|||++++++|+++|++|++++|+++.++.+.+++.+.+.++.++.+|++++++++++++++.+.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            33578999999999999999999999999999999999999888888888777778999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH--HHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY--LKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.  |++++       .++||++||..+..+.++
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~  169 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-------TGRIVNIASTGGKQGVVH  169 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-------EEEEEEECCGGGTSCCTT
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-------CeEEEEECccccccCCCC
Confidence            999999999999887777888999999999999999999999999999  88765       689999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchHHhHHHHhcCCCCCCCCHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      ...|++||+|++.|+++++.|++ ++||++|+|+||+++|++.....         ..++.........|.+++.+|+|+
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  248 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV  248 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHH
Confidence            99999999999999999999997 88999999999999865321100         002223344456788999999999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |++++||+++...+++|+.+.+|||+..
T Consensus       249 A~~v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          249 AEMVAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHhCchhcCCCCcEEEECCCccc
Confidence            9999999998889999999999999753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-46  Score=321.06  Aligned_cols=245  Identities=28%  Similarity=0.366  Sum_probs=218.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||++++++|+++|++|++++|+++.++.+.+++...+.++.++.+|++++++++++++++.+.+|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999999988888888877777899999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.      .++||++||..+..+.++...|++|
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~Y~as  155 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH------GGKIINACSQAGHVGNPELAVYSSS  155 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CCEEEEECchhhcCCCCCchhHHHH
Confidence            9999999877778888999999999999999999999999999987531      3899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---------CCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---------LAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      |+|++.|+++++.|++ ++||++|+|+||+++|++....         ...++....+....|.+++.+|+|+|++++||
T Consensus       156 K~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  234 (256)
T 1geg_A          156 KFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-HcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999997 8899999999999986542110         00122233445567888999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++...+++|+.+.+|||+.+
T Consensus       235 ~s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          235 ASPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             HSGGGTTCCSCEEEESSSSSC
T ss_pred             hCccccCCCCCEEEeCCCccC
Confidence            999889999999999999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.4e-46  Score=322.48  Aligned_cols=246  Identities=29%  Similarity=0.468  Sum_probs=186.5

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCccEEEEcCCCC---CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           89 FGKLDILVNAAAGN---FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        89 ~g~id~lv~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      ++++|+||||||+.   ...++.+.+.++|++.+++|+.++++++++++|.|.+++       .++||++||..+.   +
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~---~  153 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-------GGAIVNQSSTAAW---L  153 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CEEEEEECC--------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-------CCEEEEECCcccc---C
Confidence            99999999999983   445677889999999999999999999999999999876       7999999999876   4


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|+++|+++++.|++ ++||++|+|+||+++|+... ....++..+......|.+++.+|+|+|++++||+
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  231 (253)
T 3qiv_A          154 YSNYYGLAKVGINGLTQQLSRELG-GRNIRINAIAPGPIDTEANR-TTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLL  231 (253)
T ss_dssp             ------CCHHHHHHHHHHHHHHTT-TTTEEEEEEEC--------------------------------CCHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecCCcccchh-hcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHc
Confidence            567899999999999999999997 88999999999999866433 3334455566667778889999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++...+++|++|++|||+.+.
T Consensus       232 s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          232 SDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             SGGGTTCCSCEEEC-------
T ss_pred             CccccCCCCCEEEECCCeecC
Confidence            999999999999999998764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2e-46  Score=332.69  Aligned_cols=272  Identities=25%  Similarity=0.304  Sum_probs=227.1

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC----------hhHHHHHHHHHHhcCCcEEEEEcCCCCH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR----------KQVLDAAVSALRSLGIKAVGFEGDVRRQ   75 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~----------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   75 (299)
                      |..+..|+||++|||||++|||+++|++|+++|++|++++|+          .+.++.+.+++...+.++.++.+|++++
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            555667999999999999999999999999999999999998          7788888999988888999999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      ++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|.+.... .....|+||++
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~-~~~~~g~IV~i  177 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKA-GKAVDGRIINT  177 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcccc-CCCCCcEEEEE
Confidence            99999999999999999999999999888888899999999999999999999999999999864311 01124899999


Q ss_pred             ccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHH
Q 022335          156 SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       156 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      ||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+|| +.|++....... ...    ......+..+|+
T Consensus       178 sS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG-~~t~~~~~~~~~-~~~----~~~~~~~~~~pe  250 (322)
T 3qlj_A          178 SSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMG-RYGVTVNAIAPS-ARTRMTETVFAE-MMA----TQDQDFDAMAPE  250 (322)
T ss_dssp             CCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCGG
T ss_pred             cCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEecCC-CCCccchhhhhh-hhh----ccccccCCCCHH
Confidence            9999999999999999999999999999999997 889999999999 766654433322 111    111223457999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCccccCCC------------CCCchhHHHHHhHhhhh
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRP------------RHLPKDAVKQLSRTVEK  285 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~------------~~~~~~~~~~~~~~~~~  285 (299)
                      |+|++++||+++...++||++|.+|||+.....            .|..+.+.+.+.+.+..
T Consensus       251 dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~  312 (322)
T 3qlj_A          251 NVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGK  312 (322)
T ss_dssp             GTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence            999999999999999999999999999987542            33335566665555543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.2e-45  Score=319.23  Aligned_cols=245  Identities=23%  Similarity=0.318  Sum_probs=220.4

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +.++.+|++|||||++|||++++++|+++|++|++ ..|+.+.+++..+++...+.++.++.+|++++++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999966 56788888888899988888999999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .++++|+||||||+....++.+.+.++|++.+++|+.+++++++++++.|.+...      .++||++||..+..+.++.
T Consensus       101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~  174 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ------GGRIITLSSVSGVMGNRGQ  174 (267)
T ss_dssp             HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCHHHHHCCTTC
T ss_pred             HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CcEEEEEcchHhccCCCCC
Confidence            9999999999999988888888999999999999999999999999998874321      6899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|++.|+++++.|++ ++||++|+|+||+++|++....   +..........|.+++.+|+|+|++++||+++
T Consensus       175 ~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~  250 (267)
T 4iiu_A          175 VNYSAAKAGIIGATKALAIELA-KRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSD  250 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence            9999999999999999999997 8899999999999987654322   45556677788999999999999999999999


Q ss_pred             CCCCccCcEEEeCCcc
Q 022335          248 TGKYVNGTTLIVDGGL  263 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~  263 (299)
                      ...+++|++|.+|||+
T Consensus       251 ~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          251 IAGYVTRQVISINGGM  266 (267)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             cccCccCCEEEeCCCc
Confidence            9999999999999996

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=4.1e-46  Score=324.45  Aligned_cols=251  Identities=22%  Similarity=0.219  Sum_probs=220.3

Q ss_pred             CCCcCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      +.++..+++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+...++.++.+|+++.++++++++
T Consensus        18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHH
T ss_pred             CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHH
Confidence            445667899999999998  7799999999999999999999987  345555665555578999999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           84 STFEHFGKLDILVNAAAGNFL----VSAED-LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                      ++.+.++++|+||||||+...    .++.+ .+.++|++.+++|+.++++++++++|+|.++        .++||++||.
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--------~g~iv~isS~  167 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--------NASMVALTYI  167 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--------TCEEEEEECG
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------CCeEEEEecc
Confidence            999999999999999998754    44444 8899999999999999999999999999765        4899999999


Q ss_pred             cccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHH
Q 022335          159 LHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       159 ~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  238 (299)
                      .+..+.+++..|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++.........|.+++.+|+|+|
T Consensus       168 ~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA  246 (280)
T 3nrc_A          168 GAEKAMPSYNTMGVAKASLEATVRYTALALG-EDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVG  246 (280)
T ss_dssp             GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHH
T ss_pred             ccccCCCCchhhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHH
Confidence            9999999999999999999999999999997 889999999999998765444334456667777888999999999999


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      ++++||+++...+++|++|.+|||+.+..
T Consensus       247 ~~v~~l~s~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          247 NTVAFLCSDMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHhCcccCCcCCcEEEECCCccccC
Confidence            99999999999999999999999998754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=5.4e-46  Score=320.20  Aligned_cols=240  Identities=23%  Similarity=0.258  Sum_probs=199.0

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .++++.|+||++|||||++|||+++|++|+++|++|++++|+.+.+.+.   +.+.+  +.++.+|++++++++++++++
T Consensus        19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~Dv~~~~~v~~~~~~~   93 (260)
T 3gem_A           19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQAG--AVALYGDFSCETGIMAFIDLL   93 (260)
T ss_dssp             --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHHT--CEEEECCTTSHHHHHHHHHHH
T ss_pred             cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhcC--CeEEECCCCCHHHHHHHHHHH
Confidence            3445678899999999999999999999999999999999998765433   33323  788999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.+|++|+||||||+..... .+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.+
T Consensus        94 ~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~  165 (260)
T 3gem_A           94 KTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-------VADIVHISDDVTRKGSS  165 (260)
T ss_dssp             HHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-------SCEEEEECCGGGGTCCS
T ss_pred             HHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CcEEEEECChhhcCCCC
Confidence            999999999999999876555 5667899999999999999999999999999876       68999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|+++|+++++.|++ + +|+||+|+||+++|++..    .+..........|.+++.+|+|+|++++||+
T Consensus       166 ~~~~Y~asKaa~~~l~~~la~e~~-~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          166 KHIAYCATKAGLESLTLSFAARFA-P-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999997 6 799999999999876432    2333445566788999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                        .+.+++|++|.+|||+.+.
T Consensus       240 --~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          240 --DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             --HCSSCCSCEEEESTTTTTC
T ss_pred             --hCCCCCCCEEEECCCcccC
Confidence              4689999999999999874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=3e-46  Score=320.71  Aligned_cols=246  Identities=29%  Similarity=0.388  Sum_probs=223.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus         3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999885 77788888888999888888999999999999999999999887


Q ss_pred             cC------CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           89 FG------KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        89 ~g------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      ++      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++         .++||++||..+..
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~~~iv~isS~~~~~  153 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---------NSRIINISSAATRI  153 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---------EEEEEEECCGGGTS
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---------CCEEEEeCChhhcc
Confidence            74      4999999999987788888999999999999999999999999999832         58999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+..........+.+++.+|+|+|++++
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  232 (255)
T 3icc_A          154 SLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAA  232 (255)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             CCCCcchhHHhHHHHHHHHHHHHHHHH-hcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHH
Confidence            999999999999999999999999997 8899999999999987766555555555667777889999999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCcccc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ||+++...+++|++|.+|||+++
T Consensus       233 ~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          233 FLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESSSTTC
T ss_pred             HHhCcccCCccCCEEEecCCeeC
Confidence            99999999999999999999864

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=4e-46  Score=322.14  Aligned_cols=247  Identities=29%  Similarity=0.426  Sum_probs=221.5

Q ss_pred             CcCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHH-HHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHH
Q 022335            8 KADILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVL-DAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus         8 ~~~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~-~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      +..+++||++|||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.+ .+.++.++.+|++++++++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            3456899999999999  9999999999999999999999887554 666666654 37789999999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      ++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~  166 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-------TGSLVITASMSGHIA  166 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCGGGTSC
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-------CceEEEEcccccccc
Confidence            9999999999999999998888889999999999999999999999999999999876       689999999998877


Q ss_pred             C--CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          164 S--WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       164 ~--~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .  ++...|++||+|++.|+++++.|++ ++ |+||+|+||+++|+.. ... .++..+.+....|.+++.+|+|+|+++
T Consensus       167 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~v~~v~PG~v~t~~~-~~~-~~~~~~~~~~~~~~~r~~~~~dva~~~  242 (267)
T 3gdg_A          167 NFPQEQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYIDTGLS-DFV-PKETQQLWHSMIPMGRDGLAKELKGAY  242 (267)
T ss_dssp             CSSSCCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEEECCEECSCG-GGS-CHHHHHHHHTTSTTSSCEETHHHHHHH
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHhc-cC-cEEEEEECCccccchh-hhC-CHHHHHHHHhcCCCCCCcCHHHHHhHh
Confidence            5  5789999999999999999999996 65 9999999999986643 222 455666777889999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...++||++|.+|||+++
T Consensus       243 ~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          243 VYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             HHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             heeecCccccccCCEEEECCceec
Confidence            999999999999999999999975

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-45  Score=326.45  Aligned_cols=251  Identities=22%  Similarity=0.323  Sum_probs=219.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHH-hcCCcEEEEEcCCCCHH------------
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALR-SLGIKAVGFEGDVRRQE------------   76 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~------------   76 (299)
                      .|++|++|||||++|||++++++|+++|++|++++ |+.+.++.+.+++. ..+.++.++.+|+++.+            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            47899999999999999999999999999999999 99999888888886 45678999999999999            


Q ss_pred             -----HHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHHhhhHHHHHHHHHHHHHH
Q 022335           77 -----HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLS--------------PNGFRTVMDIDSVGTFTMCHEALKYL  137 (299)
Q Consensus        77 -----~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~m  137 (299)
                           +++++++++.+.+|++|+||||||+....++.+.+              .++|+..+++|+.++++++++++|.|
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999988777777888              89999999999999999999999999


Q ss_pred             HhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH
Q 022335          138 KKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE  217 (299)
Q Consensus       138 ~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~  217 (299)
                      .++... .....++||++||..+..+.++...|++||+|++.|+++++.|++ ++||+||+|+||+++|++  ...  ++
T Consensus       203 ~~~~~~-~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~--~~~--~~  276 (328)
T 2qhx_A          203 AGTPAK-HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD--DMP--PA  276 (328)
T ss_dssp             HHSCGG-GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCC--CSC--HH
T ss_pred             HhcCCc-CCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCCc--ccc--HH
Confidence            875310 011138999999999999999999999999999999999999997 889999999999998765  222  33


Q ss_pred             HhHHHHhcCCCC-CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          218 INSKARDYMPLY-KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       218 ~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      ..+.+....|++ ++.+|+|+|++++||+++...+++|++|.+|||+.+.+
T Consensus       277 ~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  327 (328)
T 2qhx_A          277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  327 (328)
T ss_dssp             HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccCc
Confidence            444555667888 89999999999999999988999999999999987653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.3e-46  Score=325.02  Aligned_cols=240  Identities=25%  Similarity=0.400  Sum_probs=211.9

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .++..|+||++|||||++|||+++|++|+++|++|++++|+.+.++           ....+.+|+++.++++++++++.
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999865321           12446899999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.++
T Consensus        90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~  162 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-------GGAIVNVASCWGLRPGPG  162 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCSBTTBCCTT
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEECCHHhCCCCCC
Confidence            9999999999999998888888999999999999999999999999999999876       799999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC-----CCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM-----NKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ...|++||+|++.|+++++.|++ ++||+||+|+||+++|++..     .....++.........|.+++.+|+|+|+++
T Consensus       163 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  241 (266)
T 3uxy_A          163 HALYCLTKAALASLTQCMGMDHA-PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVV  241 (266)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            99999999999999999999997 88999999999999876421     1122334446677788999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|++|.+|||+++
T Consensus       242 ~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          242 LFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHhCchhcCCcCCEEEECcCEeC
Confidence            999999999999999999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-46  Score=323.72  Aligned_cols=254  Identities=24%  Similarity=0.225  Sum_probs=217.4

Q ss_pred             CCCCcCCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Q 022335            5 SPFKADILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus         5 ~~~~~~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      .+.+...+++|++|||||+  +|||++++++|+++|++|++++|+....+ ..+++.+..+++.++.+|+++++++++++
T Consensus         5 ~~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            5 HHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAEFGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             ----CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HHHHHHHHcCCcEEEECCCCCHHHHHHHH
Confidence            4556678899999999998  99999999999999999999999865433 34444444456889999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           83 ESTFEHFGKLDILVNAAAGNFL----VSAED-LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +++.++++++|+||||||+...    .++.+ .+.++|++.+++|+.++++++++++|+|++         .++||++||
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~g~iv~isS  154 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---------DASLLTLSY  154 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---------EEEEEEEEC
T ss_pred             HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---------CceEEEEec
Confidence            9999999999999999998764    55666 899999999999999999999999999864         489999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHH
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      ..+..+.+++..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.......+...+......|.+++.+|+|+
T Consensus       155 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  233 (271)
T 3ek2_A          155 LGAERAIPNYNTMGLAKAALEASVRYLAVSLG-AKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQV  233 (271)
T ss_dssp             GGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred             cccccCCCCccchhHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHH
Confidence            99999999999999999999999999999997 88999999999999876543332234556667778899999999999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCccccCCCC
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSRPR  269 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~  269 (299)
                      |++++||+++...+++|++|.+|||+++..+.
T Consensus       234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~  265 (271)
T 3ek2_A          234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGG  265 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCC
T ss_pred             HHHHHHHcCcccCCeeeeEEEECCCeeeehhh
Confidence            99999999998999999999999999987654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.7e-45  Score=320.54  Aligned_cols=252  Identities=25%  Similarity=0.363  Sum_probs=214.5

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHH-hcCCcEEEEEcCCCC----HHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALR-SLGIKAVGFEGDVRR----QEHAKKVV   82 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~-~~~~~v~~~~~Dl~~----~~~v~~~~   82 (299)
                      ...|++|++|||||++|||++++++|+++|++|++++|+. +.++.+.+++. ..+.++.++.+|+++    ++++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            3458899999999999999999999999999999999998 88888888886 556789999999999    99999999


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCC-----CC-----CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceE
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSA-----ED-----LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSI  152 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~i  152 (299)
                      +++.+.+|++|+||||||+....++     .+     .+.++|++.+++|+.++++++++++|.|+++... .....++|
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~~~~~g~i  176 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN-CTSSNLSI  176 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC---------CCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC-CCCCCeEE
Confidence            9999999999999999998766666     56     7889999999999999999999999999865311 01114899


Q ss_pred             EEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCC-
Q 022335          153 LNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKL-  231 (299)
Q Consensus       153 v~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-  231 (299)
                      |++||..+..+.++...|++||+|++.|+++++.|++ ++||+||+|+||+++|++ .  .. .+....+....|.+++ 
T Consensus       177 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~-~--~~-~~~~~~~~~~~p~~r~~  251 (288)
T 2x9g_A          177 VNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPV-A--MG-EEEKDKWRRKVPLGRRE  251 (288)
T ss_dssp             EEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSCSCCT-T--SC-HHHHHHHHHTCTTTSSC
T ss_pred             EEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhh-ccCeEEEEEEeccccCcc-c--cC-hHHHHHHHhhCCCCCCC
Confidence            9999999999999999999999999999999999997 889999999999998775 2  22 2333445566788888 


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       232 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      .+|+|+|++++||+++...+++|+.|.+|||+.+.
T Consensus       252 ~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            99999999999999998999999999999998764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7e-46  Score=325.49  Aligned_cols=249  Identities=26%  Similarity=0.387  Sum_probs=218.6

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +..|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.   ++.++.+|++++++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999999999988888877665   7999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCC--CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           86 FEHFGKLDILVNAAAGNFLVS--AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      .+.+|++|+||||||+....+  +.+.+.++|++.+++|+.++++++++++|.|.++        +|+||++||..+..+
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--------~g~IV~isS~~~~~~  172 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT--------KGEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--------TCEEEEECCGGGSSS
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc--------CCEEEEEcCchhccC
Confidence            999999999999999876666  7788999999999999999999999999999875        389999999999888


Q ss_pred             C-CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-Cc------hHHhHHHHhcCCCCCCCCHH
Q 022335          164 S-WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-AP------DEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       164 ~-~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~  235 (299)
                      . ++...|++||+|++.|+++++.|++ ++||+||+|+||+++|++..... ..      ++.........|.+++.+|+
T Consensus       173 ~~~~~~~Y~asKaa~~~l~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  251 (297)
T 1xhl_A          173 AHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPE  251 (297)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHH
Confidence            8 8899999999999999999999997 88999999999999876432211 11      11222333456888999999


Q ss_pred             HHHHHHHHHcCCC-CCCccCcEEEeCCccccC
Q 022335          236 DIAMAALYLTSDT-GKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       236 dva~~~~~l~s~~-~~~~~G~~i~~dgg~~~~  266 (299)
                      |+|++++||+++. ..+++|+.|.+|||+.+.
T Consensus       252 dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          252 EIANIIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHhCCcccCCccCcEEEECCCcccc
Confidence            9999999999987 889999999999998764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-46  Score=321.59  Aligned_cols=248  Identities=30%  Similarity=0.439  Sum_probs=211.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   ..++.++.+|++++++++++++++.+.+|
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999998777665544   35789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.| ++        .++||++||..+. +.++...|
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--------~g~iv~isS~~~~-~~~~~~~Y  149 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--------GGSLVLTGSVAGL-GAFGLAHY  149 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--------TCEEEEECCCTTC-CHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--------CCEEEEEecchhc-CCCCcHHH
Confidence            99999999998877788889999999999999999999999999999 43        4899999999998 77888999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|++.|+++++.|++ ++||++|+|+||+++|++.. .. .+..........|.+++.+|+|+|++++||+++...
T Consensus       150 ~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~  226 (263)
T 2a4k_A          150 AAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPMTA-GL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESA  226 (263)
T ss_dssp             HHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGGGT-TS-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCcCcCchhh-hc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999997 88999999999999876543 22 233444455667888999999999999999999889


Q ss_pred             CccCcEEEeCCccccCCCCCCchh
Q 022335          251 YVNGTTLIVDGGLWLSRPRHLPKD  274 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~~~~~~~~~~  274 (299)
                      +++|+.+.+|||+.+..+..+.+.
T Consensus       227 ~~tG~~i~vdgG~~~~~~~~~~~~  250 (263)
T 2a4k_A          227 YITGQALYVDGGRSIVGPPGLPPG  250 (263)
T ss_dssp             TCCSCEEEESTTTTTC--------
T ss_pred             CCcCCEEEECCCccccCCCCCccc
Confidence            999999999999987665555443

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-46  Score=322.38  Aligned_cols=247  Identities=25%  Similarity=0.399  Sum_probs=217.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC---cEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.   ++.++.+|++++++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999888888876655   799999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCC----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           88 HFGKLDILVNAAAGNFLVS----AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      .+|++|+||||||+....+    +.+.+.++|++.+++|+.++++++++++|.|.++        +++||++||..+..+
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~  154 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--------KGEIVNVSSIVAGPQ  154 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCGGGSSS
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC--------CCcEEEecCccccCC
Confidence            9999999999999876655    6788999999999999999999999999999875        389999999999888


Q ss_pred             C-CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-Cc------hHHhHHHHhcCCCCCCCCHH
Q 022335          164 S-WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-AP------DEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       164 ~-~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~  235 (299)
                      . ++...|++||+|++.|+++++.|++ ++||++|+|+||+++|++..... ..      .+.........|.+++.+|+
T Consensus       155 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pe  233 (280)
T 1xkq_A          155 AQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE  233 (280)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHH
Confidence            7 8899999999999999999999997 88999999999999876432211 11      11223333446888999999


Q ss_pred             HHHHHHHHHcCCC-CCCccCcEEEeCCccccC
Q 022335          236 DIAMAALYLTSDT-GKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       236 dva~~~~~l~s~~-~~~~~G~~i~~dgg~~~~  266 (299)
                      |+|++++||+++. ..+++|+.+.+|||+.+.
T Consensus       234 dvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          234 HIANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence            9999999999987 889999999999998764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-45  Score=317.32  Aligned_cols=242  Identities=30%  Similarity=0.453  Sum_probs=212.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+++. ++..+++.    + .++.+|++++++++++++++.+.+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999999877 66655553    4 7889999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...|
T Consensus        77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~~Y  149 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-------GGAIVNVASVQGLFAEQENAAY  149 (256)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-------CEEEEEECCGGGTSBCTTBHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEccccccCCCCCChhH
Confidence            999999999988778888999999999999999999999999999998865       6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ++||+|++.|+++++.|++ ++||++|+|+||+++|+.....    ...++....+....|.+++.+|+|+|+++++|++
T Consensus       150 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s  228 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999997 8899999999999986542110    1012222334456788899999999999999999


Q ss_pred             CCCCCccCcEEEeCCccccC
Q 022335          247 DTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +...+++|+.+.+|||+.+.
T Consensus       229 ~~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          229 EKASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             chhcCCCCCEEEECCCcccc
Confidence            88889999999999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.7e-46  Score=325.80  Aligned_cols=240  Identities=24%  Similarity=0.329  Sum_probs=211.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-------LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.       +++..+++...+.++.++.+|++++++++++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            5779999999999999999999999999999999998753       677777777778899999999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      ++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+..+
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~  155 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-------NPHILTLAPPPSLNP  155 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-------SCEEEECCCCCCCCH
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-------CceEEEECChHhcCC
Confidence            9999999999999999998888888999999999999999999999999999998876       699999999999888


Q ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC-ccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          164 --SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPG-PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       164 --~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                        .++...|++||+|+++|+++++.|++ ++||+||+|+|| +++|++. ...          ...+..++.+|+|+|++
T Consensus       156 ~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~v~T~~~-~~~----------~~~~~~~~~~pedvA~~  223 (274)
T 3e03_A          156 AWWGAHTGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIATDAI-NML----------PGVDAAACRRPEIMADA  223 (274)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCEEEEEEECCcccccchh-hhc----------ccccccccCCHHHHHHH
Confidence              67889999999999999999999997 889999999999 5765533 111          11233457899999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCccccCCCCC
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWLSRPRH  270 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~  270 (299)
                      ++||+++...++||++| +|||++...+..
T Consensus       224 v~~l~s~~~~~itG~~i-~~~g~~~~~~~~  252 (274)
T 3e03_A          224 AHAVLTREAAGFHGQFL-IDDEVLAQAGIT  252 (274)
T ss_dssp             HHHHHTSCCTTCCSCEE-EHHHHHHHTTCC
T ss_pred             HHHHhCccccccCCeEE-EcCcchhhcccc
Confidence            99999999999999999 888877755443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=9.3e-46  Score=317.91  Aligned_cols=243  Identities=25%  Similarity=0.345  Sum_probs=214.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |++|++|||||++|||++++++|+++|++|++++|+.+  +...+++...+.++.++.+|++++++++++++++.+.+|+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999876  5566667666678999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...|+
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~  152 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-------WGRIINIASVHGLVGSTGKAAYV  152 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCGGGTSCCTTBHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEEcCchhccCCCCchhHH
Confidence            99999999988777788889999999999999999999999999999875       68999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc--hHH---h----HHH-HhcCCCCCCCCHHHHHHHH
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP--DEI---N----SKA-RDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~---~----~~~-~~~~~~~~~~~~~dva~~~  241 (299)
                      +||++++.|+++++.|++ ++||++|+|+||+++|++... ...  ...   .    ..+ ....|.+++.+|+|+|+++
T Consensus       153 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  230 (255)
T 2q2v_A          153 AAKHGVVGLTKVVGLETA-TSNVTCNAICPGWVLTPLVQK-QIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV  230 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TSSEEEEEEEESSBCCHHHHH-HHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcCcchhh-hcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence            999999999999999997 889999999999998654221 100  111   1    222 4457888999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|+.+.+|||+.+
T Consensus       231 ~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          231 LFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhCCccCCCCCCEEEECCCccC
Confidence            999998889999999999999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6.4e-46  Score=323.98  Aligned_cols=239  Identities=24%  Similarity=0.326  Sum_probs=215.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-------VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-------~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      +.|++|++|||||++|||++++++|+++|++|++++|+.+       .+++..+++...+.++.++.+|+++++++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            3578999999999999999999999999999999999976       577778888877889999999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++       .++||++||..+..
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~  157 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-------NPHILTLSPPIRLE  157 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-------SCEEEECCCCCCCS
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEECChhhcc
Confidence            99999999999999999998888899999999999999999999999999999998866       68999999999988


Q ss_pred             cC-CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC-ccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          163 AS-WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPG-PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       163 ~~-~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      +. ++...|++||+|+++|+++++.|++ ++||+||+|+|| ++.|++         .........+.+++.+|+|+|++
T Consensus       158 ~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~v~PG~~v~t~~---------~~~~~~~~~~~~r~~~pedvA~~  227 (285)
T 3sc4_A          158 PKWLRPTPYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVATAA---------VQNLLGGDEAMARSRKPEVYADA  227 (285)
T ss_dssp             GGGSCSHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECSSCBCCHH---------HHHHHTSCCCCTTCBCTHHHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeCCCccccHH---------HHhhccccccccCCCCHHHHHHH
Confidence            86 7889999999999999999999997 889999999999 565431         22233345678889999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCccccC
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++||+++.. +++|+.+.+|||+...
T Consensus       228 ~~~l~s~~~-~~tG~~i~~dgg~~~~  252 (285)
T 3sc4_A          228 AYVVLNKPS-SYTGNTLLCEDVLLES  252 (285)
T ss_dssp             HHHHHTSCT-TCCSCEEEHHHHHHHH
T ss_pred             HHHHhCCcc-cccceEEEEcCchhcc
Confidence            999999888 9999999999998764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.5e-45  Score=317.78  Aligned_cols=246  Identities=28%  Similarity=0.438  Sum_probs=215.5

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ...++||++|||||++|||++++++|+++|++|++++|+.+. .+.+.+++...+.++.++.+|+++.++++++++++.+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999998754 5666777777777899999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-  166 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-  166 (299)
                      .++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.  .       .++||++||..+..+.+. 
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-------~g~iv~isS~~~~~~~~~~  174 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-------GGRLILMGSITGQAKAVPK  174 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-------TCEEEEECCGGGTCSSCSS
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-------CCeEEEEechhhccCCCCC
Confidence            999999999999988777788889999999999999999999999999992  2       589999999999887764 


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-------C--CchHHhHHHHh--cCCCCCCCCHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-------L--APDEINSKARD--YMPLYKLGEKW  235 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-------~--~~~~~~~~~~~--~~~~~~~~~~~  235 (299)
                      ...|++||+|++.|+++++.|++ ++||+||+|+||+++|++....       .  ..++....+..  ..|.+++.+|+
T Consensus       175 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  253 (283)
T 1g0o_A          175 HAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI  253 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHH
Confidence            89999999999999999999997 8899999999999987642110       0  02233344444  67899999999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      |+|++++||+++...+++|+.|.+|||+.
T Consensus       254 dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          254 DIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            99999999999988999999999999975

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=5.1e-46  Score=319.35  Aligned_cols=242  Identities=32%  Similarity=0.364  Sum_probs=212.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++.+.+|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999998777766555   45788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...|
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  151 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-------GGSIVNISSAAGLMGLALTSSY  151 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTCHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CCEEEEECchhhccCCCCchhH
Confidence            999999999987777788889999999999999999999999999999876       6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCC-CHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG-EKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~  249 (299)
                      ++||+|++.|+++++.|++ ++||++|+|+||+++|++... ... +.........|.+++. +|+|+|+++++|+++..
T Consensus       152 ~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~~-~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~  228 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAE-TGI-RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHH-HTC-CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccCcCccccc-cch-hHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchh
Confidence            9999999999999999997 889999999999998653211 000 0111122335677888 99999999999999888


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+.+|||+.+
T Consensus       229 ~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          229 SYVTGAELAVDGGWTT  244 (254)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCCCCCEEEECCCccc
Confidence            9999999999999876

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-46  Score=326.56  Aligned_cols=245  Identities=23%  Similarity=0.247  Sum_probs=216.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      ..|+||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++...  +.++.++.+|+++++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999998   9999999999999999988765  56899999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           85 TFEHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      +.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.++++++++++|.|++++       .|+||++||..+..+
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~IV~isS~~~~~~  181 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-------SGDIVNLGSIAGRDA  181 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCGGGTSC
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCeEEEECChhhcCC
Confidence            9999999999999999876 57788999999999999999999999999999999876       799999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++......  .+..........    ..+|+|+|+++
T Consensus       182 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~pedvA~~v  256 (287)
T 3rku_A          182 YPTGSIYCASKFAVGAFTDSLRKELI-NTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTT----PLMADDVADLI  256 (287)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSC----CEEHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccC----CCCHHHHHHHH
Confidence            99999999999999999999999997 889999999999998764321111  122222222222    34899999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +||+++...+++|+.+.+|+|....
T Consensus       257 ~~l~s~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          257 VYATSRKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             HHHHTSCTTEEEEEEEEEETTEEET
T ss_pred             HHHhCCCCCeEecceEEeeCCCCCC
Confidence            9999999999999999999998763

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-45  Score=313.15  Aligned_cols=238  Identities=22%  Similarity=0.190  Sum_probs=210.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ||++|||||++|||++++++|+++|  +.|++++|+.+.++++.+++   +.++.++.+|++++++++++++++.+.+|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999985  78999999998888777665   457999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           92 LDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        92 id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      +|+||||||+... .++.+.+.++|++.+++|+.++++++++++|+|+++        +|+||++||..+..+.++...|
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--------~g~iv~isS~~~~~~~~~~~~Y  150 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--------NGNVVFVSSDACNMYFSSWGAY  150 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCSCCCCSSCCSHHH
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--------CCeEEEEcCchhccCCCCcchH
Confidence            9999999998654 788899999999999999999999999999999886        3899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-------chHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-------PDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      ++||+|+++|+++++.|+   +||+||+|+||+++|++......       .++..+.+....|.+++.+|+|+|++++|
T Consensus       151 ~asK~a~~~~~~~la~e~---~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  227 (254)
T 3kzv_A          151 GSSKAALNHFAMTLANEE---RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAK  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHC---TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhc---cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHH
Confidence            999999999999999997   38999999999998775433211       34555667777899999999999999999


Q ss_pred             HcCCC-CCCccCcEEEeCCcccc
Q 022335          244 LTSDT-GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~-~~~~~G~~i~~dgg~~~  265 (299)
                      |+++. +.++||+.|.+|||...
T Consensus       228 L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          228 LALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHCCCGGGTTCEEETTCGGGG
T ss_pred             HHhhcccCCCCccEEEecCcccc
Confidence            99988 59999999999999864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.3e-46  Score=319.76  Aligned_cols=245  Identities=25%  Similarity=0.376  Sum_probs=200.2

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+..   .+   ..+.++.++.+|++++++++++++.+.+ +
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~   77 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VA---DLGDRARFAAADVTDEAAVASALDLAET-M   77 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HH---HTCTTEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HH---hcCCceEEEECCCCCHHHHHHHHHHHHH-h
Confidence            357899999999999999999999999999999999965432   22   2366899999999999999999998877 9


Q ss_pred             CCccEEEEcCCCCCCC----CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-CCCCCCceEEEeccccccccC
Q 022335           90 GKLDILVNAAAGNFLV----SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPG-RSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        90 g~id~lv~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~-~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +++|+||||||+....    +..+.+.++|++++++|+.++++++++++|+|.+.... ......|+||++||..+..+.
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence            9999999999976432    22357899999999999999999999999999874211 011226899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  243 (299)
                      ++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. .++.........|. +++.+|+|+|++++|
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~-~~-~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  234 (257)
T 3tl3_A          158 IGQAAYSASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLFDTPLLA-SL-PEEARASLGKQVPHPSRLGNPDEYGALAVH  234 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecCccChhhh-hc-cHHHHHHHHhcCCCCCCccCHHHHHHHHHH
Confidence            9999999999999999999999997 88999999999999876433 33 34455566677787 899999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++  .++||++|.+|||+.+.
T Consensus       235 l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          235 IIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHC--TTCCSCEEEESTTC---
T ss_pred             HhcC--CCCCCCEEEECCCccCC
Confidence            9986  79999999999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-45  Score=316.65  Aligned_cols=242  Identities=27%  Similarity=0.341  Sum_probs=214.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++.+|++++++++++++++.+.+|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999998888777666   56789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|+++        +++||++||..+..+.++...|
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y  151 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--------GGSIINMASVSSWLPIEQYAGY  151 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSCCTTBHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc--------CCEEEEEcchhhcCCCCCCccH
Confidence            99999999998877888899999999999999999999999999999764        3899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCC--CeEEEEEeCCccCCCCCCCCCCchHHhHH-HHh---cCCCCCCCCHHHHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADY--DIRVNGIAPGPIGDTPGMNKLAPDEINSK-ARD---YMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~--gi~v~~i~pG~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++||++++.|+++++.|++ ++  ||++|+|+||+++|++...... +..... +..   ..|.+++.+|+|+|++++||
T Consensus       152 ~~sK~a~~~~~~~la~e~~-~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  229 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLP-KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSC-TTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEEeCCccCchhhhccc-hhhhHHHHhhhhccCccCCCCCHHHHHHHHHHH
Confidence            9999999999999999997 77  9999999999998764221111 111122 223   45778899999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++...+++|+.+.+|||+..
T Consensus       230 ~s~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          230 ASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCTT
T ss_pred             cCccccCCCCcEEEECCCccc
Confidence            999889999999999999865

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.7e-45  Score=313.60  Aligned_cols=239  Identities=19%  Similarity=0.166  Sum_probs=200.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+. |
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g   82 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-A   82 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-C
Confidence            467999999999999999999999999999999999999999999999888889999999999999999999999999 9


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++       .|+||++||..+..+.++...|
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  155 (252)
T 3h7a_A           83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-------QGKIFFTGATASLRGGSGFAAF  155 (252)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEEEEGGGTCCCTTCHHH
T ss_pred             CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEECCHHHcCCCCCCccH
Confidence            999999999998888888999999999999999999999999999999876       6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEE-EEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRV-NGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v-~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      ++||+|+++|+++++.|++ ++||+| |+|+||+++|++.....  ++.........|.+ +.+|+|+|++++||+++..
T Consensus       156 ~asKaa~~~l~~~la~e~~-~~gi~v~n~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          156 ASAKFGLRAVAQSMARELM-PKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALANPDL-LMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCCccCChhhhccc--hhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCch
Confidence            9999999999999999997 889999 99999999876543322  22223344445666 8999999999999999888


Q ss_pred             CCccCcEEEeCC
Q 022335          250 KYVNGTTLIVDG  261 (299)
Q Consensus       250 ~~~~G~~i~~dg  261 (299)
                      .+.+|+.....-
T Consensus       232 ~~~~~~i~~~~~  243 (252)
T 3h7a_A          232 SAWTFEMEIRPY  243 (252)
T ss_dssp             GGBCSEEEEBCC
T ss_pred             hcceeeEEeeec
Confidence            888998766543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=4.2e-45  Score=315.27  Aligned_cols=247  Identities=23%  Similarity=0.310  Sum_probs=208.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+ ..+.+.+.+...+.++.++.+|++++++++++++++.+.++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            45799999999999999999999999999999977654 44555555555567899999999999999999999999999


Q ss_pred             CccEEEEcCC--CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc-cc-cccCCC
Q 022335           91 KLDILVNAAA--GNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT-LH-YTASWY  166 (299)
Q Consensus        91 ~id~lv~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~-~~-~~~~~~  166 (299)
                      ++|+||||||  .....++.+.+.++|++.+++|+.+++.++++++|.|++++       .++||++||. .+ ..+.++
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~iss~~~~~~~~~~~  157 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-------FGRIINYGFQGADSAPGWIY  157 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCTTGGGCCCCTT
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-------CCeEEEEeechhcccCCCCC
Confidence            9999999999  44557788889999999999999999999999999999876       6999999998 44 566778


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||+|++.|+++++.|++ ++||+||+|+||+++|++... . .++.........|.+++.+|+|+|++++||++
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s  234 (264)
T 3i4f_A          158 RSAFAAAKVGLVSLTKTVAYEEA-EYGITANMVCPGDIIGEMKEA-T-IQEARQLKEHNTPIGRSGTGEDIARTISFLCE  234 (264)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCGGGGSC-C-HHHHHHC--------CCCCHHHHHHHHHHHHS
T ss_pred             CchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEccCCccCccchh-c-cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence            89999999999999999999997 889999999999998664332 2 23444455567788999999999999999999


Q ss_pred             CCCCCccCcEEEeCCccccCCC
Q 022335          247 DTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      +...+++|++|.+|||++...+
T Consensus       235 ~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          235 DDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             GGGTTCCSCEEEESCSCCCCC-
T ss_pred             cccCCCCCcEEEEcCceeeccC
Confidence            9999999999999999987543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-45  Score=317.88  Aligned_cols=248  Identities=28%  Similarity=0.382  Sum_probs=206.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR---SLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~---~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.   ..+.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999998888888773   2345789999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCC----CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-cc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDL----SPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-YT  162 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-~~  162 (299)
                      .+|++|+||||||+....++.+.    +.++|++.+++|+.++++++++++|.|+++        +++||++||..+ ..
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~  154 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--------KGEIVNISSIASGLH  154 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCTTSSSS
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--------CCeEEEEeccccccc
Confidence            99999999999998766677777    899999999999999999999999999875        389999999998 88


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-CchHH------hHHHHhcCCCCCCCCHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-APDEI------NSKARDYMPLYKLGEKW  235 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~  235 (299)
                      +.++...|++||++++.|+++++.|++ ++||++|+|+||+++|++..... .....      ........|.+++.+|+
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  233 (278)
T 1spx_A          155 ATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ  233 (278)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHH
Confidence            888999999999999999999999997 88999999999999876543221 11111      23344557888999999


Q ss_pred             HHHHHHHHHcCCCCCC-ccCcEEEeCCccccCC
Q 022335          236 DIAMAALYLTSDTGKY-VNGTTLIVDGGLWLSR  267 (299)
Q Consensus       236 dva~~~~~l~s~~~~~-~~G~~i~~dgg~~~~~  267 (299)
                      |+|+++++|+++...+ ++|+.+.+|||+.+..
T Consensus       234 dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~  266 (278)
T 1spx_A          234 DIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIM  266 (278)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-
T ss_pred             HHHHHHHHHcCccccCcccCcEEEECCCccccc
Confidence            9999999999977676 9999999999987643

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.9e-45  Score=314.18  Aligned_cols=248  Identities=22%  Similarity=0.242  Sum_probs=206.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56999999999999999999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++       .|+||++||..+..+.++...|+
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~IV~isS~~~~~~~~~~~~Y~  154 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-------SGQIINIGSIGALSVVPTAAVYC  154 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTCCCTTCHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CeEEEEEcCHHHcccCCCChhHH
Confidence            99999999998888889999999999999999999999999999999876       79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +||+|+++|+++++.|+  + ||+||+|+||+++|++... ...+.......  .......+|+|+|++++||+++...+
T Consensus       155 asKaal~~l~~~la~e~--~-gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~--~~~~~~~~pedvA~~v~~l~s~~~~~  228 (264)
T 3tfo_A          155 ATKFAVRAISDGLRQES--T-NIRVTCVNPGVVESELAGT-ITHEETMAAMD--TYRAIALQPADIARAVRQVIEAPQSV  228 (264)
T ss_dssp             HHHHHHHHHHHHHHHHC--S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHHHHHhC--C-CCEEEEEecCCCcCccccc-ccchhHHHHHH--hhhccCCCHHHHHHHHHHHhcCCccC
Confidence            99999999999999997  4 9999999999998765432 22211111110  11122579999999999999999999


Q ss_pred             ccCcEEEeCCccccCCCCCCc
Q 022335          252 VNGTTLIVDGGLWLSRPRHLP  272 (299)
Q Consensus       252 ~~G~~i~~dgg~~~~~~~~~~  272 (299)
                      .+|+.+..++|+.+......+
T Consensus       229 ~~~~i~i~p~~~~~~~~~~~~  249 (264)
T 3tfo_A          229 DTTEITIRPTASGNAENLYFQ  249 (264)
T ss_dssp             EEEEEEEEECC----------
T ss_pred             ccceEEEecCccccccCccee
Confidence            999999999998775444333

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.8e-45  Score=316.33  Aligned_cols=253  Identities=25%  Similarity=0.366  Sum_probs=215.1

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      ||.+..  ...|++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.   .++.++.+|+++++++++
T Consensus         1 ~~~m~~--~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~   75 (263)
T 3ak4_A            1 GSHMAG--IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDA   75 (263)
T ss_dssp             -----C--TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHH
T ss_pred             CCCccc--CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHH
Confidence            444433  235789999999999999999999999999999999999887776655442   267889999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc
Q 022335           81 VVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH  160 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~  160 (299)
                      +++++.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++..      .++||++||..+
T Consensus        76 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~------~g~iv~isS~~~  149 (263)
T 3ak4_A           76 AMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT------KGVIVNTASLAA  149 (263)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC------CCEEEEECCGGG
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC------CeEEEEeccccc
Confidence            99999999999999999999887777888899999999999999999999999999987531      389999999999


Q ss_pred             cccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchHHhHHHHhcCCCCCC
Q 022335          161 YTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDEINSKARDYMPLYKL  231 (299)
Q Consensus       161 ~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~  231 (299)
                      ..+.++...|++||+|++.|+++++.|++ ++||++|+|+||+++|+......         ..++....+....|.+++
T Consensus       150 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  228 (263)
T 3ak4_A          150 KVGAPLLAHYSASKFAVFGWTQALAREMA-PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRI  228 (263)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSC
T ss_pred             ccCCCCchhHHHHHHHHHHHHHHHHHHHh-HcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999999997 88999999999999865421100         002223344556788899


Q ss_pred             CCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       232 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+|+|+|++++||+++...+++|+.+++|||+.+
T Consensus       229 ~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          229 EEPEDVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            9999999999999998888999999999999764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.6e-45  Score=316.70  Aligned_cols=246  Identities=25%  Similarity=0.391  Sum_probs=216.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+.           +.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998753           4568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...
T Consensus        73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  145 (264)
T 2dtx_A           73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-------DPSIVNISSVQASIITKNASA  145 (264)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-------SCEEEEECCGGGTSCCTTBHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CcEEEEECCchhccCCCCchh
Confidence            9999999999988778888999999999999999999999999999998765       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-----Cch----HHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-----APD----EINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      |++||+|++.|+++++.|++ ++ |++|+|+||+++|+......     ..+    +....+....|.+++.+|+|+|++
T Consensus       146 Y~~sK~a~~~~~~~la~e~~-~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  223 (264)
T 2dtx_A          146 YVTSKHAVIGLTKSIALDYA-PL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99999999999999999997 77 99999999999765322110     011    223344455788899999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCccccCCCCCCchhH
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLPKDA  275 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~~  275 (299)
                      +++|+++...+++|+.+.+|||+.+..|...++..
T Consensus       224 v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~~~~~~  258 (264)
T 2dtx_A          224 VAFLASREASFITGTCLYVDGGLSIRAPISTPELE  258 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGCCCCCCCC--
T ss_pred             HHHHhCchhcCCCCcEEEECCCcccCCCCCCcchh
Confidence            99999988899999999999999998888877543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.1e-45  Score=315.28  Aligned_cols=247  Identities=29%  Similarity=0.402  Sum_probs=210.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +.++|++|||||++|||+++|++|+++|++|+++ .|+.+.++.+.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3468999999999999999999999999999876 788888888989998888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-Cc
Q 022335           90 GKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQ  167 (299)
Q Consensus        90 g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~  167 (299)
                      +++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|.+....    ..++||++||..+..+.+ ..
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~  178 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSG----QGGAIVNVSSMAAILGSATQY  178 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTC----CCEEEEEECCTHHHHCCTTTC
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccC----CCCEEEEEcchHhccCCCCCc
Confidence            999999999998765 778888999999999999999999999999999874211    158999999999988776 67


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|++.|+++++.|++ ++||++++|+||+++|+..... ...+.........|.+++.+|+|+|++++||+++
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~  256 (272)
T 4e3z_A          179 VDYAASKAAIDTFTIGLAREVA-AEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPSVPMQRAGMPEEVADAILYLLSP  256 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             chhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCCcCCccccc-CChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCC
Confidence            8899999999999999999997 8899999999999987654332 2233344556677888999999999999999999


Q ss_pred             CCCCccCcEEEeCCcc
Q 022335          248 TGKYVNGTTLIVDGGL  263 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~  263 (299)
                      ...+++|+.|++|||+
T Consensus       257 ~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          257 SASYVTGSILNVSGGR  272 (272)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             ccccccCCEEeecCCC
Confidence            9999999999999995

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.9e-44  Score=310.65  Aligned_cols=238  Identities=29%  Similarity=0.392  Sum_probs=213.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++..   ++.++.+|++++++++++++++.+.+|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999999887777666532   588899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...|
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y  153 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-------RGSIINISSIEGLAGTVACHGY  153 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTBHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CCEEEEEeehhhcCCCCCchhH
Confidence            999999999988777888899999999999999999999999999999876       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||++++.|+++++.|++ ++||++|+|+||+++|+...  ...+.    .. ..|.+++.+|+|+|+++++|+++...
T Consensus       154 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~--~~~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~~~  225 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMTD--WVPED----IF-QTALGRAAEPVEVSNLVVYLASDESS  225 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGGT--TSCTT----CS-CCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCCCCccc--cchhh----HH-hCccCCCCCHHHHHHHHHHHhCcccc
Confidence            9999999999999999997 88999999999999876532  11111    11 45778889999999999999998889


Q ss_pred             CccCcEEEeCCccccC
Q 022335          251 YVNGTTLIVDGGLWLS  266 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~~  266 (299)
                      +++|+.+.+|||+.+.
T Consensus       226 ~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          226 YSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CCcCCEEEECCCeecc
Confidence            9999999999998874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.8e-45  Score=315.61  Aligned_cols=241  Identities=27%  Similarity=0.379  Sum_probs=202.3

Q ss_pred             CCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335            5 SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         5 ~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      +|.+...+++|++|||||++|||++++++|+++|++|++++|+.+.++           ++.++.+|+++++++++++++
T Consensus        12 ~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~   80 (253)
T 2nm0_A           12 SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKE   80 (253)
T ss_dssp             --------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHH
Confidence            467777889999999999999999999999999999999999865322           278899999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.
T Consensus        81 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~~  153 (253)
T 2nm0_A           81 IEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-------KGRVVLISSVVGLLGS  153 (253)
T ss_dssp             HHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-------CEEEEEECCCCCCCCH
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCEEEEECchhhCCCC
Confidence            999999999999999988777788888899999999999999999999999999876       6999999999999888


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|++.|+++++.|++ ++||++|+|+||+++|++.. ... ++.........|.+++.+|+|+|+++++|
T Consensus       154 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~-~~~-~~~~~~~~~~~p~~~~~~p~dvA~~i~~l  230 (253)
T 2nm0_A          154 AGQANYAASKAGLVGFARSLARELG-SRNITFNVVAPGFVDTDMTK-VLT-DEQRANIVSQVPLGRYARPEEIAATVRFL  230 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchh-hcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            8899999999999999999999997 88999999999999876432 221 22223344567888899999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +++...+++|+.+.+|||+.+.
T Consensus       231 ~s~~~~~~tG~~i~vdGG~~~~  252 (253)
T 2nm0_A          231 ASDDASYITGAVIPVDGGLGMG  252 (253)
T ss_dssp             HSGGGTTCCSCEEEESTTTTCC
T ss_pred             hCccccCCcCcEEEECCccccC
Confidence            9998899999999999998753

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2.9e-45  Score=315.90  Aligned_cols=246  Identities=25%  Similarity=0.303  Sum_probs=213.4

Q ss_pred             CCCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..|++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++.+|++++++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            35779999999999  99999999999999999999999975 4444555544333478899999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           88 HFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      .+|++|+||||||+...    .++.+.+.++|++.+++|+.++++++++++|.|++         +|+||++||..+..+
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~  153 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---------GGGIVTLTYYASEKV  153 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---------EEEEEEEECGGGTSB
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---------CCEEEEEecccccCC
Confidence            99999999999998653    56778899999999999999999999999998853         489999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .++...|++||+|++.|+++++.|++ ++||+||+|+||+++|+........++....+....|.+++.+|+|+|++++|
T Consensus       154 ~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~  232 (261)
T 2wyu_A          154 VPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLF  232 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999997 88999999999999876532221223444455566788999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++...+++|+.+.+|||+.+.
T Consensus       233 l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          233 LLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HcChhhcCCCCCEEEECCCcccc
Confidence            99988899999999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-45  Score=314.81  Aligned_cols=233  Identities=27%  Similarity=0.429  Sum_probs=208.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+..+         ..++.++.+|++++++++++++++.+.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999999865321         2368999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--CCCc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--SWYQ  167 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--~~~~  167 (299)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++.       .++||++||..+..+  ..+.
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~~  167 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-------SGHIVSITTSLVDQPMVGMPS  167 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCTTTTSCBTTCCC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-------CcEEEEEechhhccCCCCCcc
Confidence            9999999999998888888999999999999999999999999999999876       799999999887644  4456


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.     ..+.........|.+++.+|+|+|++++||  +
T Consensus       168 ~~Y~~sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~-----~~~~~~~~~~~~p~~r~~~~~dva~av~~L--~  239 (260)
T 3un1_A          168 ALASLTKGGLNAVTRSLAMEFS-RSGVRVNAVSPGVIKTPMH-----PAETHSTLAGLHPVGRMGEIRDVVDAVLYL--E  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECCBCCTTS-----CGGGHHHHHTTSTTSSCBCHHHHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEEeecCCCCCCC-----CHHHHHHHhccCCCCCCcCHHHHHHHHHHh--c
Confidence            8999999999999999999997 8899999999999987643     234445566778999999999999999999  4


Q ss_pred             CCCCccCcEEEeCCccccC
Q 022335          248 TGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~~  266 (299)
                      ...+++|++|++|||+.+.
T Consensus       240 ~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          240 HAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HCTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCCcEEEECCCeecc
Confidence            5688999999999998874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=4.7e-44  Score=307.76  Aligned_cols=251  Identities=28%  Similarity=0.373  Sum_probs=223.2

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      |+...+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|++++++++++++++.
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            44556889999999999999999999999999999999999988888888887777789999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           87 EHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      +.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++.|.|.+++       .++||++||..+..+.+
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~  158 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-------QGVIVAIGSMSGLIVNR  158 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCS
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-------CCEEEEEecchhcccCC
Confidence            99999999999999876 56788889999999999999999999999999998865       68999999999988877


Q ss_pred             Cc--hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          166 YQ--IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       166 ~~--~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      ..  ..|++||++++.++++++.+++ ++||++++|+||+++++........+.....+....|.+++.+|+|+|+++++
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (260)
T 3awd_A          159 PQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQF  237 (260)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence            77  8999999999999999999997 88999999999999876433122223444455566788889999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCcccc
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+++...+++|+.+++|||+..
T Consensus       238 l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          238 LASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTTTT
T ss_pred             HhCchhccCCCcEEEECCceec
Confidence            9998888999999999999864

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=4.2e-45  Score=315.62  Aligned_cols=248  Identities=21%  Similarity=0.215  Sum_probs=211.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.+|++|||||++|||++++++|+++|++|++++|+.+.+++.      ...++.++.+|+++.++++++++++.+.+|
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL------NLPNTLCAQVDVTDKYTFDTAITRAEKIYG   86 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT------CCTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh------hcCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence            47799999999999999999999999999999999998765442      123688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++       .|+||++||..+..+.++...|
T Consensus        87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-------~g~IV~isS~~~~~~~~~~~~Y  159 (266)
T 3p19_A           87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-------CGTIINISSIAGKKTFPDHAAY  159 (266)
T ss_dssp             SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCGGGTSCCTTCHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEcChhhCCCCCCCchH
Confidence            999999999998888899999999999999999999999999999999876       6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh-cCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD-YMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      ++||+|+++|+++++.|++ ++||+||+|+||+++|++... ............ ..|.+++.+|+|+|++++||++...
T Consensus       160 ~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          160 CGTKFAVHAISENVREEVA-ASNVRVMTIAPSAVKTELLSH-TTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGG-CSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCccccchhhc-ccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCC
Confidence            9999999999999999997 889999999999998765433 333332222222 3478889999999999999999998


Q ss_pred             CCccCcEEEeCCccccCCCCCCch
Q 022335          250 KYVNGTTLIVDGGLWLSRPRHLPK  273 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~~~~~~~~  273 (299)
                      ....++.+....+.....+...++
T Consensus       238 ~~~~~~i~i~p~~~~~~~~~~~~~  261 (266)
T 3p19_A          238 NVCIREIALAPTKQQPKLAAALEH  261 (266)
T ss_dssp             TEEEEEEEEEETTCCC--------
T ss_pred             CccceeeEEecCCCCCccchhhhh
Confidence            889999988888887766665553

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=8e-45  Score=311.20  Aligned_cols=237  Identities=24%  Similarity=0.355  Sum_probs=195.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.        ...  .+.++.+|++++++++++++++.+.++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g   73 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAETE   73 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3679999999999999999999999999999999998652        111  278899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++.       .++||++||..+..+.++...|
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~~Y  146 (250)
T 2fwm_X           74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-------GGAIVTVASDAAHTPRIGMSAY  146 (250)
T ss_dssp             CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCGGGTSCCTTCHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-------CCEEEEECchhhCCCCCCCchH
Confidence            999999999988777888899999999999999999999999999998876       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhH-HHHh-------cCCCCCCCCHHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS-KARD-------YMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~dva~~~~  242 (299)
                      ++||++++.|+++++.|++ ++||++|+|+||+++|++.......++..+ .+..       ..|.+++.+|+|+|++++
T Consensus       147 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~  225 (250)
T 2fwm_X          147 GASKAALKSLALSVGLELA-GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL  225 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC------------------------------------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhC-ccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHH
Confidence            9999999999999999997 889999999999998765332111111111 2222       467788999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCcccc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ||+++...+++|+.+.+|||+++
T Consensus       226 ~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          226 FLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHhCccccCCCCCEEEECCCccc
Confidence            99999889999999999999865

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.5e-44  Score=312.05  Aligned_cols=257  Identities=27%  Similarity=0.396  Sum_probs=198.0

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      |+...+.+...+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++.+++++
T Consensus         1 ~~~~~~~~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (266)
T 1xq1_A            1 MAGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREK   80 (266)
T ss_dssp             ------CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCccccCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHH
Confidence            44444445556889999999999999999999999999999999999998888888887777789999999999999999


Q ss_pred             HHHHHHHHc-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc
Q 022335           81 VVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL  159 (299)
Q Consensus        81 ~~~~~~~~~-g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~  159 (299)
                      +++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++.+       .++||++||..
T Consensus        81 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~iv~isS~~  153 (266)
T 1xq1_A           81 LMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-------CGNIIFMSSIA  153 (266)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------SCEEEEEC---
T ss_pred             HHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEccch
Confidence            999999999 8999999999987777788889999999999999999999999999998876       68999999999


Q ss_pred             ccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHH
Q 022335          160 HYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       160 ~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  239 (299)
                      +..+.+....|++||++++.++++++.+++ ++||++++|+||++.++...... .+..........|.+++.+|+|+|+
T Consensus       154 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
T 1xq1_A          154 GVVSASVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSS  231 (266)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHH
T ss_pred             hccCCCCCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            998888899999999999999999999997 88999999999999876543222 2222333344567778899999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++++|+++...+++|+.+.+|||+.+.
T Consensus       232 ~~~~l~~~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          232 LVAFLCMPAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             HHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred             HHHHHcCccccCccCcEEEEcCCcccc
Confidence            999999988889999999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=3.8e-45  Score=312.70  Aligned_cols=237  Identities=24%  Similarity=0.385  Sum_probs=200.9

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ....|++|++|||||++|||++++++|+++|++|++++|+++.+++           +..+.+|++++++++++++++.+
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHH
Confidence            3446889999999999999999999999999999999998754322           22489999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++.
T Consensus        78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  150 (247)
T 1uzm_A           78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-------FGRMIFIGSVSGLWGIGNQ  150 (247)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCCCC-----CC
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CCEEEEECCHhhccCCCCC
Confidence            999999999999988777888899999999999999999999999999999875       6999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|++.|+++++.|++ ++||++|+|+||+++|++.. .. .+..........|.+++.+|+|+|++++||+++
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~-~~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~  227 (247)
T 1uzm_A          151 ANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTR-AL-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASE  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-HS-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCCcccchh-hc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999997 88999999999999765422 22 223334455567888999999999999999998


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      ...+++|+.+.+|||+.+
T Consensus       228 ~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          228 DASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCCcCCEEEECCCccc
Confidence            889999999999999865

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=9.3e-45  Score=310.79  Aligned_cols=238  Identities=20%  Similarity=0.231  Sum_probs=204.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--C-CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--G-IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~-~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++...  + .++.++.+|+++.++++++++++.+
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999999999888765  3 6789999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .+|++|+||||||+....++ +.+.++|++.+++|+.++++++++++|.|+++.       .|+||++||..+..+.+..
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~  155 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-------NGYIFNVASRAAKYGFADG  155 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECC-------CCT
T ss_pred             hcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CeEEEEEccHHhcCCCCCC
Confidence            99999999999999877777 778999999999999999999999999999876       6999999999999877779


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++.          .......+..++.+|+|+|++++||+++
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~----------~~~~~~~~~~~~~~p~dva~~v~~l~s~  224 (250)
T 3nyw_A          156 GIYGSTKFALLGLAESLYRELA-PLGIRVTTLCPGWVNTDMA----------KKAGTPFKDEEMIQPDDLLNTIRCLLNL  224 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHH----------HHTTCCSCGGGSBCHHHHHHHHHHHHTS
T ss_pred             cchHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCchh----------hhcCCCcccccCCCHHHHHHHHHHHHcC
Confidence            9999999999999999999997 8899999999999976432          1122334566789999999999999996


Q ss_pred             C-CCCccCcEEEeCCccccCC
Q 022335          248 T-GKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       248 ~-~~~~~G~~i~~dgg~~~~~  267 (299)
                      . ..++++..|.+|||.....
T Consensus       225 ~~~~~~~~~~i~vd~~~~~~~  245 (250)
T 3nyw_A          225 SENVCIKDIVFEMKKSIIEGH  245 (250)
T ss_dssp             CTTEECCEEEEEEHHHHHC--
T ss_pred             CCceEeeEEEEEeeccccccc
Confidence            5 4567788999999976643

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-44  Score=313.80  Aligned_cols=242  Identities=33%  Similarity=0.481  Sum_probs=210.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+++.++.+.+++.    ++.++.+|++++++++++++++.+.+|
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRFG   81 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4779999999999999999999999999999999999987776655542    478899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|+|+++        .++||++||..+..+.++...
T Consensus        82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~  153 (270)
T 1yde_A           82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--------QGNVINISSLVGAIGQAQAVP  153 (270)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCHHHHHCCTTCHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--------CCEEEEEcCccccCCCCCCcc
Confidence            99999999998653 677788999999999999999999999999999865        389999999999989899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---CCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---KLAP-DEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      |++||+|++.|+++++.|++ ++||++|+|+||+++|++...   .... ...........|++++.+|+|+|++++||+
T Consensus       154 Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~  232 (270)
T 1yde_A          154 YVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA  232 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999997 889999999999998754211   0111 111222234578899999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++ ..+++|+.|.+|||+.+.
T Consensus       233 s~-~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          233 SE-ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             HH-CTTCCSCEEEESTTTTSC
T ss_pred             cc-CCCcCCCEEEECCCeecc
Confidence            97 789999999999998774

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-44  Score=306.95  Aligned_cols=244  Identities=30%  Similarity=0.374  Sum_probs=200.8

Q ss_pred             CCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335            5 SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus         5 ~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .|.+...+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   ..++.++.+|+++.+++++++++
T Consensus         5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A            5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT
T ss_pred             CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh
Confidence            355566789999999999999999999999999999999999998888877766   34788999999999998887764


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                          ++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++.       .++||++||..+..+.
T Consensus        82 ----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~  150 (249)
T 3f9i_A           82 ----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-------YGRIINISSIVGIAGN  150 (249)
T ss_dssp             ----CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCCCC--CC
T ss_pred             ----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CcEEEEEccHHhccCC
Confidence                47899999999988777777888899999999999999999999999999876       6999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++++.|++ ++||++|+|+||+++|+.. ... .+..........+.+++.+|+|+|+++++|
T Consensus       151 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~-~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  227 (249)
T 3f9i_A          151 PGQANYCASKAGLIGMTKSLSYEVA-TRGITVNAVAPGFIKSDMT-DKL-NEKQREAIVQKIPLGTYGIPEDVAYAVAFL  227 (249)
T ss_dssp             SCSHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBC-------C-CHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCccccCcc-ccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999997 8899999999999986543 333 344556667778999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++...+++|+++++|||+.+
T Consensus       228 ~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          228 ASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             HSGGGTTCCSCEEEESTTSSC
T ss_pred             cCCccCCccCcEEEECCCEee
Confidence            999999999999999999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=6.9e-45  Score=314.20  Aligned_cols=245  Identities=22%  Similarity=0.256  Sum_probs=211.3

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|++|++|||||+  +|||++++++|+++|++|++++|+. ..++..+++....++..++.+|++++++++++++++.+.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            4779999999999  9999999999999999999999987 444555555443334578999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           89 FGKLDILVNAAAGNFL----VSAED-LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      +|++|+||||||+...    .++.+ .+.++|++.+++|+.++++++++++|.|.+         .|+||++||..+..+
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~  155 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---------GSALLTLSYLGAERA  155 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEEECGGGTSB
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---------CCEEEEEcchhhccC
Confidence            9999999999998653    45566 889999999999999999999999999853         489999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .++...|++||+|++.|+++++.|++ ++||+||+|+||+++|+........+..........|.+++.+|+|+|++++|
T Consensus       156 ~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~  234 (265)
T 1qsg_A          156 IPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF  234 (265)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999999997 88999999999999876533221223334445556788899999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++...+++|+.+.+|||+.+.
T Consensus       235 l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          235 LCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCchhcCccCCEEEECCCcCCC
Confidence            99988899999999999998765

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.4e-44  Score=304.81  Aligned_cols=244  Identities=26%  Similarity=0.415  Sum_probs=217.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-HhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++ ...+.++.++.+|++++++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999998888887777 4445679999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCC---CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           93 DILVNAAAGNFLVS---AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        93 d~lv~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |+||||||+....+   +.+.+.++|++.+++|+.+++++++.++|.|++++       .++||++||..+..+.++...
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~  154 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-------AGVIVNIASVASLVAFPGRSA  154 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTCHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-------CCEEEEECChhhccCCCCchh
Confidence            99999999876555   67788999999999999999999999999998876       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||++++.++++++.++. ++||++++|+||++.|++.......+..........|.+++.+|+|+|+++++|+++..
T Consensus       155 Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  233 (250)
T 2cfc_A          155 YTTSKGAVLQLTKSVAVDYA-GSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDA  233 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999997 88999999999999876532212223344445566788899999999999999999888


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .+++|+.+.+|||++.
T Consensus       234 ~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          234 TYVNGAALVMDGAYTA  249 (250)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             hcccCCEEEECCceec
Confidence            9999999999999764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=8.1e-44  Score=307.03  Aligned_cols=240  Identities=21%  Similarity=0.255  Sum_probs=208.6

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +.++..++||++|||||++|||+++|++|+++|++|++++|+.+.++.+.+++...+.++.++.+|+++.++++++++++
T Consensus        21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence            44566789999999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           86 FEHFGKLDILVNAAAG-NFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      .+.+|++|+||||||+ ....++.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.
T Consensus       101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~  173 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-------RGHIINISSLAGKNPV  173 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CCEEEEECSSCSSCCC
T ss_pred             HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CceEEEEechhhcCCC
Confidence            9999999999999998 4456788899999999999999999999999999999876       6899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ++...|++||+|+++|+++++.|++ ++||++|+|+||+++|++... ..         ...+..+..+|+|+|++++||
T Consensus       174 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~~---------~~~~~~~~~~p~dvA~~v~~l  242 (262)
T 3rkr_A          174 ADGAAYTASKWGLNGLMTSAAEELR-QHQVRVSLVAPGSVRTEFGVG-LS---------AKKSALGAIEPDDIADVVALL  242 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCCcCCcccc-cc---------cccccccCCCHHHHHHHHHHH
Confidence            9999999999999999999999997 889999999999998764322 11         123445678999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcc
Q 022335          245 TSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~  263 (299)
                      +++...+++|+.+..+.+.
T Consensus       243 ~s~~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          243 ATQADQSFISEVLVRPTLK  261 (262)
T ss_dssp             HTCCTTCCEEEEEEECCCC
T ss_pred             hcCccccccCcEEeccccC
Confidence            9999999999999887653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=7e-44  Score=310.45  Aligned_cols=249  Identities=23%  Similarity=0.324  Sum_probs=215.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++   +.++.++.+|+++.++++++++++ +.
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~  100 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQ  100 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TT
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HH
Confidence            45788999999999999999999999999999999999999888887776   567999999999999999999999 88


Q ss_pred             cCCccEEEEc-CCCCCCCCC-----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           89 FGKLDILVNA-AAGNFLVSA-----EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        89 ~g~id~lv~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      ++++|++||| +|+.....+     .+.+.++|++.+++|+.+++++++++++.|.+.... .....|+||++||..+..
T Consensus       101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPR-ENGERGALVLTASIAGYE  179 (281)
T ss_dssp             SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCC-TTSCCEEEEEECCGGGTS
T ss_pred             hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc-ccCCCeEEEEEecccccC
Confidence            8999999999 555444433     367889999999999999999999999999874321 112268999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAA  241 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~  241 (299)
                      +.++...|++||+|+++|+++++.|++ ++||+||+|+||+++|++.. .. .++....+....+. +++.+|+|+|+++
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~-~~-~~~~~~~~~~~~~~~~~~~~pedvA~~v  256 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLS-SAGIRVNTIAPGTMKTPIME-SV-GEEALAKFAANIPFPKRLGTPDEFADAA  256 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TT-CHHHHHHHHHTCCSSSSCBCHHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCCchhhh-cc-cHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999997 88999999999999865432 22 34445566667777 8899999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccCC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +||+++  .+++|++|.+|||+.+..
T Consensus       257 ~~l~s~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          257 AFLLTN--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             HHHHHC--SSCCSCEEEESTTCCCCC
T ss_pred             HHHHcC--CCcCCcEEEECCCcccCC
Confidence            999975  689999999999998753

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3.9e-44  Score=304.91  Aligned_cols=235  Identities=31%  Similarity=0.427  Sum_probs=207.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||++++++|+++|++|++++|+.+.   ..+++   +  +.++.+|+++ ++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999999865   33333   2  7889999999 999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC--CCchHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS--WYQIHVA  171 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~--~~~~~Y~  171 (299)
                      +||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.  ++...|+
T Consensus        73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~~~Y~  145 (239)
T 2ekp_A           73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-------WGRVLFIGSVTTFTAGGPVPIPAYT  145 (239)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTSCCHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEECchhhccCCCCCCCccHH
Confidence            999999988777888999999999999999999999999999999876       6999999999998887  8899999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +||+|++.|+++++.|++ ++||++|+|+||+++|++.......++.........|.+++.+|+|+|+++++|+++...+
T Consensus       146 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~  224 (239)
T 2ekp_A          146 TAKTALLGLTRALAKEWA-RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEY  224 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            999999999999999997 8899999999999987643211112233344556678889999999999999999998899


Q ss_pred             ccCcEEEeCCcccc
Q 022335          252 VNGTTLIVDGGLWL  265 (299)
Q Consensus       252 ~~G~~i~~dgg~~~  265 (299)
                      ++|+.+.+|||+..
T Consensus       225 ~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          225 LTGQAVAVDGGFLA  238 (239)
T ss_dssp             CCSCEEEESTTTTT
T ss_pred             CCCCEEEECCCccc
Confidence            99999999999764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-44  Score=309.29  Aligned_cols=238  Identities=24%  Similarity=0.327  Sum_probs=205.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+++.++++. ++    .++.++.+|++++++++    ++.+.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~~~   73 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANEVE   73 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHHhC
Confidence            467999999999999999999999999999999999987665543 22    26889999999999988    4455679


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-CchH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-~~~~  169 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++       .++||++||..+..+.+ +...
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~~  146 (246)
T 2ag5_A           74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-------SGNIINMSSVASSVKGVVNRCV  146 (246)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCSBTTTBCCTTBHH
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CceEEEEechHhCcCCCCCCcc
Confidence            999999999988777888889999999999999999999999999998876       68999999999988877 8999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----CchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----APDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      |++||+|++.++++++.|++ ++||++|+|+||+++|+......    ..++....+....|.+++.+|+|+|++++||+
T Consensus       147 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  225 (246)
T 2ag5_A          147 YSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA  225 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh
Confidence            99999999999999999997 88999999999999875422101    11233344555678889999999999999999


Q ss_pred             CCCCCCccCcEEEeCCcccc
Q 022335          246 SDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++...+++|+.|.+|||+.+
T Consensus       226 s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          226 SDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             SGGGTTCCSCEEEECTTGGG
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            99899999999999999864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.5e-44  Score=319.80  Aligned_cols=237  Identities=26%  Similarity=0.310  Sum_probs=211.9

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-------LDAAVSALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      .+..|+||++|||||++|||+++|++|+++|++|++++|+.+.       ++...+++...+.++.++.+|+++++++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            3457899999999999999999999999999999999998764       667778888888899999999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc
Q 022335           81 VVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH  160 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~  160 (299)
                      +++++.+.+|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .++||++||..+
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-------~g~IV~iSS~~~  191 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-------VAHILNISPPLN  191 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-------SCEEEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-------CCEEEEECCHHH
Confidence            9999999999999999999998888899999999999999999999999999999998876       699999999999


Q ss_pred             ccc--CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCc-cCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHH
Q 022335          161 YTA--SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGP-IGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       161 ~~~--~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      ..+  .++...|++||+|+++|+++++.|++  +||+||+|+||+ ++|+          ..+......+.+++.+|+|+
T Consensus       192 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~gIrvn~v~PG~~i~T~----------~~~~~~~~~~~~r~~~pedv  259 (346)
T 3kvo_A          192 LNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK--GEIAVNALWPKTAIHTA----------AMDMLGGPGIESQCRKVDII  259 (346)
T ss_dssp             CCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT--TTCEEEEEECSBCBCCH----------HHHHHCC--CGGGCBCTHHH
T ss_pred             cCCCCCCCchHHHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCccccH----------HHHhhccccccccCCCHHHH
Confidence            887  78899999999999999999999994  699999999996 7542          22233344466778999999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |++++||+++ ..++||+++ +|||+..
T Consensus       260 A~~v~~L~s~-~~~itG~~i-vdgg~~~  285 (346)
T 3kvo_A          260 ADAAYSIFQK-PKSFTGNFV-IDENILK  285 (346)
T ss_dssp             HHHHHHHHTS-CTTCCSCEE-EHHHHHH
T ss_pred             HHHHHHHHhc-CCCCCceEE-ECCcEeh
Confidence            9999999999 899999998 9999543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-43  Score=307.74  Aligned_cols=245  Identities=29%  Similarity=0.432  Sum_probs=219.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++|++|||||++|||++++++|+++|++|++++|+++.++.+.+++...+.++.++.+|++++++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            35779999999999999999999999999999999999988888888887777789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+.+       .++||++||..+..+.++...
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~  192 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-------YGRIINISSIVGLTGNVGQAN  192 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-------CEEEEEECCTHHHHCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-------CCEEEEECChhhccCCCCCch
Confidence            9999999999988777888899999999999999999999999999998875       689999999999999899999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|++.++++++.+++ +.||++++|+||+++|+... .. .+..........|.+++.+|+|+|+++++|+++..
T Consensus       193 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~  269 (285)
T 2c07_A          193 YSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTD-KI-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS  269 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcEecCchh-hc-CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            99999999999999999997 88999999999999866432 22 23344445566788889999999999999999888


Q ss_pred             CCccCcEEEeCCccc
Q 022335          250 KYVNGTTLIVDGGLW  264 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~  264 (299)
                      .+++|+.+.+|||+.
T Consensus       270 ~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          270 GYINGRVFVIDGGLS  284 (285)
T ss_dssp             TTCCSCEEEESTTSC
T ss_pred             CCCCCCEEEeCCCcc
Confidence            899999999999975

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=8.9e-44  Score=306.30  Aligned_cols=249  Identities=31%  Similarity=0.512  Sum_probs=220.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +|++|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            477999999999999999999999999999999999 8888888888887777789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||+....++.+.+.++|++.+++|+.+++++++++++.|.++..      .++||++||..+..+.+....
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~  157 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI------KGTVINMSSVHEKIPWPLFVH  157 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC------CCEEEEECCGGGTSCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC------CCEEEEeCCHHhcCCCCCccH
Confidence            99999999999877777778899999999999999999999999999987531      379999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|++.++++++.+++ ++||++++|+||+++|+........++.........|.+++.+|+|+|+++++|+++..
T Consensus       158 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (261)
T 1gee_A          158 YAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            99999999999999999997 88999999999999866432111112333344456688889999999999999999888


Q ss_pred             CCccCcEEEeCCccccC
Q 022335          250 KYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~  266 (299)
                      .+++|+.+.+|||+.+.
T Consensus       237 ~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          237 SYVTGITLFADGGMTLY  253 (261)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             cCCCCcEEEEcCCcccC
Confidence            89999999999998764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.9e-43  Score=310.58  Aligned_cols=275  Identities=33%  Similarity=0.512  Sum_probs=231.7

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +...|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++... +.++.++.+|+++.++++++++++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            344688999999999999999999999999999999999999888888888765 6789999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.++++|+||||||+....++.+.+.++|++.+++|+.+++++++++++.|.+...      .++||++||..+..+.++
T Consensus       100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~  173 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK------GAAFLSITTIYAETGSGF  173 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------CEEEEEECCTHHHHCCTT
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC------CCEEEEEcccccccCCCC
Confidence            99999999999999877777778899999999999999999999999999984321      589999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch-HHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      ...|++||+|++.++++++.+++ ++||++++|+||++.++.+....... ..........|.+++.+|+|+|+++++++
T Consensus       174 ~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~  252 (302)
T 1w6u_A          174 VVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC  252 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHT
T ss_pred             cchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHc
Confidence            99999999999999999999997 88999999999999876443333222 22234556678888999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccCCCCCCc--hhHHHHHhHhhhhccCC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLSRPRHLP--KDAVKQLSRTVEKRSRD  289 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~~~~~~~--~~~~~~~~~~~~~~~~~  289 (299)
                      ++...+++|+.+++|||..+.......  .......|+..++..+.
T Consensus       253 ~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  298 (302)
T 1w6u_A          253 SDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIRK  298 (302)
T ss_dssp             SGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC---
T ss_pred             CCcccccCCCEEEECCCeeeccCCccccchhhccccccChhhhccC
Confidence            988889999999999998876444432  33455668877666554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-43  Score=302.19  Aligned_cols=235  Identities=25%  Similarity=0.316  Sum_probs=208.1

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCC--CCHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDV--RRQEHAKKVVE   83 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl--~~~~~v~~~~~   83 (299)
                      ++...|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+ .++.++.+|+  ++.++++++++
T Consensus         7 ~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A            7 AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             CCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHH
Confidence            44457899999999999999999999999999999999999999999999998765 5677777777  99999999999


Q ss_pred             HHHHHcCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           84 STFEHFGKLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      ++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++++       .++||++||..+..
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~  159 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-------DASIAFTSSSVGRK  159 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-------SEEEEEECCGGGTS
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-------CCeEEEEcchhhcC
Confidence            99999999999999999853 46788899999999999999999999999999998766       68999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +.++...|++||+|+++|+++++.|++ + +||+||+|+||+++|++..          .........+..+|+|+|+++
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~i~v~~v~PG~v~t~~~~----------~~~~~~~~~~~~~p~dva~~~  228 (247)
T 3i1j_A          160 GRANWGAYGVSKFATEGLMQTLADELE-GVTAVRANSINPGATRTGMRA----------QAYPDENPLNNPAPEDIMPVY  228 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHT-TTSSEEEEEEECCCCSSHHHH----------HHSTTSCGGGSCCGGGGTHHH
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCccch----------hcccccCccCCCCHHHHHHHH
Confidence            999999999999999999999999996 5 7999999999999865321          111111223567899999999


Q ss_pred             HHHcCCCCCCccCcEEEe
Q 022335          242 LYLTSDTGKYVNGTTLIV  259 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~  259 (299)
                      +||+++...++||++|.+
T Consensus       229 ~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          229 LYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEC
T ss_pred             HHHhCchhccccCeeecC
Confidence            999999999999999986

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=8.5e-45  Score=314.31  Aligned_cols=241  Identities=24%  Similarity=0.277  Sum_probs=206.6

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|++|++|||||  ++|||++++++|+++|++|++++|+.+. ++++.++   .+.++.++.+|++++++++++++++.+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHH
Confidence            477999999999  9999999999999999999999998755 3443332   245688999999999999999999999


Q ss_pred             HcC---CccEEEEcCCCCC-----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc
Q 022335           88 HFG---KLDILVNAAAGNF-----LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL  159 (299)
Q Consensus        88 ~~g---~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~  159 (299)
                      .+|   ++|+||||||+..     ..++.+.+.++|++.+++|+.++++++++++|+|.+         .|+||++||..
T Consensus        81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~g~iv~iss~~  151 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---------GGSIVGMDFDP  151 (269)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEEECCC
T ss_pred             HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---------CCeEEEEcCcc
Confidence            999   9999999999875     457788899999999999999999999999999854         37999999987


Q ss_pred             ccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---CCchH-------HhHHHHhcCCCC
Q 022335          160 HYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---LAPDE-------INSKARDYMPLY  229 (299)
Q Consensus       160 ~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~-------~~~~~~~~~~~~  229 (299)
                      + .+.+.+..|++||+|+++|+++++.|++ ++||+||+|+||+++|++....   ...++       ..+.+....|.+
T Consensus       152 ~-~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  229 (269)
T 2h7i_A          152 S-RAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG  229 (269)
T ss_dssp             S-SCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC
T ss_pred             c-cccCchHHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcc
Confidence            6 6778899999999999999999999997 8899999999999987643211   01111       123344567888


Q ss_pred             -CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          230 -KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       230 -~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                       ++.+|+|+|++++||+|+.+.++||++|.+|||+.+
T Consensus       230 rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          230 WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence             699999999999999999999999999999999876

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.6e-43  Score=301.31  Aligned_cols=235  Identities=29%  Similarity=0.328  Sum_probs=206.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++.+.+|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999999999999998888887777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.++        +|+||++||..+..+.++...|
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y  155 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS--------KGTVVQMSSIAGRVNVRNAAVY  155 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCGGGTCCCTTCHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--------CCEEEEEccHHhcCCCCCCcHH
Confidence            99999999998877888899999999999999999999999999999875        3899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCC--CCHHHHHHHHHHHcCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKL--GEKWDIAMAALYLTSDT  248 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~l~s~~  248 (299)
                      ++||+|+++|+++++.|++ ++||+||+|+||+++|++... ...+...... ...| +++  .+|+|+|++++||+++.
T Consensus       156 ~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~-~~~~-~~~~~~~pedvA~~v~~l~s~~  231 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVT-ERGVRVVVIEPGTTDTELRGH-ITHTATKEMY-EQRI-SQIRKLQAQDIAEAVRYAVTAP  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGG-CCCHHHHHHH-HHHT-TTSCCBCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCCCCCcchhc-ccchhhHHHH-Hhcc-cccCCCCHHHHHHHHHHHhCCC
Confidence            9999999999999999997 889999999999998765332 2222221211 2223 455  89999999999999988


Q ss_pred             CCCccCcEE
Q 022335          249 GKYVNGTTL  257 (299)
Q Consensus       249 ~~~~~G~~i  257 (299)
                      ..+++++..
T Consensus       232 ~~~~~~~i~  240 (247)
T 2jah_A          232 HHATVHEIF  240 (247)
T ss_dssp             TTEEEEEEE
T ss_pred             ccCccceEE
Confidence            777777643

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.8e-43  Score=301.95  Aligned_cols=244  Identities=32%  Similarity=0.437  Sum_probs=215.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcE-EEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA-VGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..+++|++|||||++|||++++++|+++|++|++++|+++.++...+++   +.++ .++.+|+++.++++++++++.+ 
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-   82 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-
Confidence            3578999999999999999999999999999999999998887777666   3456 8899999999999999999988 


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc-
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-  167 (299)
                      ++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.+.. 
T Consensus        83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~  155 (254)
T 2wsb_A           83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-------AGAIVNLGSMSGTIVNRPQF  155 (254)
T ss_dssp             HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCSSSC
T ss_pred             hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CcEEEEEecchhccCCCCCc
Confidence            99999999999988777888899999999999999999999999999999876       6899999999998887777 


Q ss_pred             -hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          168 -IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       168 -~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                       ..|++||++++.++++++.+++ ++||++++|+||++.|+........++....+....|.+++.+|+|+|++++++++
T Consensus       156 ~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  234 (254)
T 2wsb_A          156 ASSYMASKGAVHQLTRALAAEWA-GRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLAS  234 (254)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence             9999999999999999999997 88999999999999765432111122334455566788889999999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +...+++|+.+.+|||+..
T Consensus       235 ~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          235 PAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             cccccccCCEEEECCCEec
Confidence            8888999999999999864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=2.1e-43  Score=307.06  Aligned_cols=248  Identities=25%  Similarity=0.415  Sum_probs=218.3

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ++...+++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++...+.++.++.+|+++.++++++++++.
T Consensus        27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHH
Confidence            34446889999999999999999999999999999999999887777777777667789999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCC-CCCC-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-
Q 022335           87 EHFGKLDILVNAAAGNFL-VSAE-DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-  163 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-  163 (299)
                      +.++++|+||||||+... .++. +.+.++|++.+++|+.+++.+++.+++.|++++       .++||++||..+..+ 
T Consensus       107 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~  179 (279)
T 3ctm_A          107 KDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-------KGSLIITSSISGKIVN  179 (279)
T ss_dssp             HHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCCTTSCC-
T ss_pred             HHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCeEEEECchHhccCC
Confidence            999999999999998766 6666 778899999999999999999999999999875       689999999999887 


Q ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          164 -SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       164 -~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                       .+....|++||++++.++++++.+++ ++| ++|+|+||+++|+... . ..++....+....|.+++.+|+|+|++++
T Consensus       180 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~-~v~~v~Pg~v~t~~~~-~-~~~~~~~~~~~~~p~~~~~~~~dvA~~~~  255 (279)
T 3ctm_A          180 IPQLQAPYNTAKAACTHLAKSLAIEWA-PFA-RVNTISPGYIDTDITD-F-ASKDMKAKWWQLTPLGREGLTQELVGGYL  255 (279)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHTT-TTC-EEEEEEECSBSSTTTS-S-CCHHHHHHHHHHSTTCSCBCGGGTHHHHH
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHhc-ccC-CEEEEeccCCcccccc-c-cChHHHHHHHHhCCccCCcCHHHHHHHHH
Confidence             77889999999999999999999997 889 9999999999876542 2 23444445556678889999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCcccc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|+++...+++|+.+.+|||+.+
T Consensus       256 ~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          256 YLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHhCccccCccCCEEEECCCeec
Confidence            99998889999999999999865

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2e-43  Score=299.74  Aligned_cols=228  Identities=19%  Similarity=0.210  Sum_probs=194.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++.+|++++++++++++++.+.+|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999999999888887773   259999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |+||||||+....++.+.+.++|++++++|+.++++++++++|.|+++.        ++||++||..+..+.++...|++
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~a  150 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--------GVLANVLSSAAQVGKANESLYCA  150 (235)
T ss_dssp             SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------EEEEEECCEECCSSCSSHHHHHH
T ss_pred             cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CEEEEEeCHHhcCCCCCCcHHHH
Confidence            9999999998778888999999999999999999999999999998753        69999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC-CCCCC
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS-DTGKY  251 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~  251 (299)
                      ||+|+++|+++++.|++ ++||++|+|+||+++|++..... .          .+..++.+|+|+|++++++++ +...+
T Consensus       151 sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~-~----------~~~~~~~~pedvA~~v~~l~~~~~~~~  218 (235)
T 3l6e_A          151 SKWGMRGFLESLRAELK-DSPLRLVNLYPSGIRSEFWDNTD-H----------VDPSGFMTPEDAAAYMLDALEARSSCH  218 (235)
T ss_dssp             HHHHHHHHHHHHHHHTT-TSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEE
T ss_pred             HHHHHHHHHHHHHHHhh-ccCCEEEEEeCCCccCcchhccC-C----------CCCcCCCCHHHHHHHHHHHHhCCCCcc
Confidence            99999999999999997 88999999999999876432211 1          133477899999999999998 56778


Q ss_pred             ccCcEEEeCCcc
Q 022335          252 VNGTTLIVDGGL  263 (299)
Q Consensus       252 ~~G~~i~~dgg~  263 (299)
                      ++|-.+......
T Consensus       219 i~~i~~~~~~~~  230 (235)
T 3l6e_A          219 VTDLFIGRNEGH  230 (235)
T ss_dssp             EEEEEEEECCC-
T ss_pred             eeeEEEecCCCC
Confidence            888877765543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-43  Score=304.00  Aligned_cols=253  Identities=24%  Similarity=0.407  Sum_probs=217.4

Q ss_pred             CCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHH
Q 022335            4 ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus         4 ~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      +.+.+...+++|++|||||++|||++++++|+++|++|++++|+.+..+...+++.+ .+.++.++.+|+++++++++++
T Consensus         4 ~~~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   83 (265)
T 1h5q_A            4 MAPGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTI   83 (265)
T ss_dssp             --CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHH
Confidence            344555568899999999999999999999999999999999977666655566543 3667999999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++..      .++||++||..+..
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~------~~~iv~~sS~~~~~  157 (265)
T 1h5q_A           84 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ------KGSIVVTSSMSSQI  157 (265)
T ss_dssp             HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTS
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC------CceEEEeCCchhhc
Confidence            999999999999999999887777888899999999999999999999999999987641      38999999998876


Q ss_pred             cCCC-------chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHH
Q 022335          163 ASWY-------QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       163 ~~~~-------~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      +.+.       ...|++||++++.++++++.+++ ++||++++|+||+++|+... .. .+..........|.+++.+|+
T Consensus       158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~  234 (265)
T 1h5q_A          158 INQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQTA-HM-DKKIRDHQASNIPLNRFAQPE  234 (265)
T ss_dssp             CCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGG-GS-CHHHHHHHHHTCTTSSCBCGG
T ss_pred             cccccccccccccccHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccccccc-cc-chhHHHHHHhcCcccCCCCHH
Confidence            6542       78999999999999999999997 88999999999999866433 22 233444555667888999999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+|+++++|+++...+++|+.+.+|||+.+
T Consensus       235 dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          235 EMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            999999999998888999999999999865

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.2e-42  Score=298.15  Aligned_cols=247  Identities=33%  Similarity=0.489  Sum_probs=221.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999998888888888777789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||+....++ +.+.++|++.+++|+.++++++++++|.|++..       .++||++||..+..+.++...
T Consensus        87 ~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~  158 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-------GGVILTITSMAAENKNINMTS  158 (255)
T ss_dssp             SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTCCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcchhhcCCCCCCcc
Confidence            999999999998766665 678999999999999999999999999998876       689999999999999889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||++++.++++++.+++ .+||++++|+||++.++...... .+..........|.+++.+|+|+|+++++++++..
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (255)
T 1fmc_A          159 YASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCcc
Confidence            99999999999999999997 88999999999999865433222 33444555566788899999999999999999888


Q ss_pred             CCccCcEEEeCCccccC
Q 022335          250 KYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~  266 (299)
                      .+++|+.++++||...+
T Consensus       237 ~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          237 SWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             TTCCSCEEEESTTSCCC
T ss_pred             ccCCCcEEEECCceecc
Confidence            88999999999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.6e-44  Score=309.51  Aligned_cols=248  Identities=25%  Similarity=0.314  Sum_probs=205.1

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK-AVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ...++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.+ +.++.+|++++++++++++++.+
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999998888765444 58999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           88 HFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      .+|++|+||||||+... .++.+.+.++|++++++|+.++++++++++|.|+++...     .|+||++||..+..+.++
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~-----~g~IV~isS~~~~~~~~~  182 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR-----GGRIINNGSISAQTPRPN  182 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC-----CEEEEEECCGGGTCCCTT
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----CcEEEEECCHHhCCCCCC
Confidence            99999999999998755 678889999999999999999999999999999986411     489999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||+|+++|+++++.|++ ++||+||+|+||+++|++... .....  .......+..++.+|+|+|++++||++
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~-~~~~~--~~~~~~~~~~~~~~pedvA~~v~fL~s  258 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGR-MHDIACGQIDIGNAATDMTAR-MSTGV--LQANGEVAAEPTIPIEHIAEAVVYMAS  258 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEECBCC--------CEE--ECTTSCEEECCCBCHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcCcChhhhh-hcchh--hhhhhcccccCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999997 889999999999998764332 21110  011123455678999999999999998


Q ss_pred             CC-CCCccCcEEEeCCcccc
Q 022335          247 DT-GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~-~~~~~G~~i~~dgg~~~  265 (299)
                      .. ...+++.++......++
T Consensus       259 ~~~~~~i~~~~i~p~~~~~~  278 (281)
T 4dry_A          259 LPLSANVLTMTVMATRMPLV  278 (281)
T ss_dssp             SCTTEEEEEEEEEETTSSCS
T ss_pred             CCccCccccEEEEecccccc
Confidence            54 44566777776665554

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.1e-43  Score=304.86  Aligned_cols=235  Identities=24%  Similarity=0.349  Sum_probs=189.5

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +..+.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999998888877776   357899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           89 FGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      +|++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|+++...     .|+||++||..+..+.++.
T Consensus       100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~-----~g~IV~isS~~~~~~~~~~  174 (272)
T 4dyv_A          100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPR-----GGRIINNGSISATSPRPYS  174 (272)
T ss_dssp             HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSC-----CEEEEEECCSSTTSCCTTC
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCC-----CcEEEEECchhhcCCCCCc
Confidence            9999999999998755 678889999999999999999999999999999986421     4899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++... .....  .......+..++.+|+|+|++++||++.
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~-~~~~~--~~~~~~~~~~~~~~pedvA~~v~fL~s~  250 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGR-VHDIACGQIDIGNADTPMAQK-MKAGV--PQADLSIKVEPVMDVAHVASAVVYMASL  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEEECcccChhhhh-hcccc--hhhhhcccccCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999997 889999999999998764332 21111  1122345667789999999999999996


Q ss_pred             CCCCccCc
Q 022335          248 TGKYVNGT  255 (299)
Q Consensus       248 ~~~~~~G~  255 (299)
                      ......+.
T Consensus       251 ~~~~~~~~  258 (272)
T 4dyv_A          251 PLDANVQF  258 (272)
T ss_dssp             CTTSCCCE
T ss_pred             CCcCccce
Confidence            55543333

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=5.5e-43  Score=298.32  Aligned_cols=241  Identities=26%  Similarity=0.428  Sum_probs=216.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ||++|||||++|||++++++|+++|++|++ .+|+.+..+.+.+++...+.++.++.+|++++++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999998 5899888888888887777789999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++       .++||++||..+..+.++...|++
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~  153 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-------KGRIINIASVVGLIGNIGQANYAA  153 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-------CCEEEEECChhhcCCCCCCccchh
Confidence            9999999988777778889999999999999999999999999998876       689999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc-CCCCCC
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT-SDTGKY  251 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~  251 (299)
                      ||++++.++++++.++. ++||++++|+||+++|++.. .. .+..........|.+++.+|+|+|+++++++ ++...+
T Consensus       154 sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  230 (244)
T 1edo_A          154 AKAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMTA-KL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASY  230 (244)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHH-TT-CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGG
T ss_pred             hHHHHHHHHHHHHHHhh-hcCCEEEEEeeCccccchhh-hc-ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCC
Confidence            99999999999999997 88999999999999765432 22 2333444556678888999999999999999 777889


Q ss_pred             ccCcEEEeCCccc
Q 022335          252 VNGTTLIVDGGLW  264 (299)
Q Consensus       252 ~~G~~i~~dgg~~  264 (299)
                      ++|+.+.+|||+.
T Consensus       231 ~~G~~~~v~gG~~  243 (244)
T 1edo_A          231 ITGQAFTIDGGIA  243 (244)
T ss_dssp             CCSCEEEESTTTT
T ss_pred             cCCCEEEeCCCcc
Confidence            9999999999975

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3e-43  Score=300.51  Aligned_cols=243  Identities=29%  Similarity=0.460  Sum_probs=195.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++|++|||||++|||++++++|+++|++|+++ .|+++.++...+++...+.++.++.+|++++++++++++++.+.++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            568999999999999999999999999999998 6777778888888877777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.++...|
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y  155 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-------SGKIINITSIAGIIGNAGQANY  155 (247)
T ss_dssp             CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-------CEEEEEECC---------CHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CcEEEEEcChhhccCCCCCcHh
Confidence            999999999987666777888899999999999999999999999998876       6899999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||++++.++++++.+++ ++||++|+|+||+++|+... .. .+.....+....|.+++.+|+|+|+++++++++...
T Consensus       156 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  232 (247)
T 2hq1_A          156 AASKAGLIGFTKSIAKEFA-AKGIYCNAVAPGIIKTDMTD-VL-PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSN  232 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHH-HcCcEEEEEEEEEEeccchh-hc-chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccc
Confidence            9999999999999999997 88999999999999765322 22 233344455567888899999999999999998888


Q ss_pred             CccCcEEEeCCccc
Q 022335          251 YVNGTTLIVDGGLW  264 (299)
Q Consensus       251 ~~~G~~i~~dgg~~  264 (299)
                      +++|+.+++|||+.
T Consensus       233 ~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          233 YITGQVINIDGGLV  246 (247)
T ss_dssp             TCCSCEEEESTTC-
T ss_pred             cccCcEEEeCCCcc
Confidence            99999999999975

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=7e-43  Score=298.90  Aligned_cols=246  Identities=31%  Similarity=0.443  Sum_probs=215.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... .++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467999999999999999999999999999999999998887777766432 5799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCC-ceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGG-GSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~-g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++.+++.++|.|++++       . ++||++||..+..+.++...
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-------~~~~iv~isS~~~~~~~~~~~~  154 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-------LGASIINMSSIEGFVGDPSLGA  154 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-------SCEEEEEECCGGGTSCCTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-------CCCEEEEeCCchhccCCCCCcc
Confidence            999999999988777888899999999999999999999999999998764       4 89999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |++||++++.++++++.|+. +++||++++|+||++.|+... ...............|.+++.+|+|+|+++++|+++.
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVD-DLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHH-TSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhh-hcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999973 156999999999999865432 2222222222344567788999999999999999988


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      ..+++|+.+.+|||+.+
T Consensus       234 ~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          234 SKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cccccCcEEEECCCccC
Confidence            88999999999999875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.6e-44  Score=307.99  Aligned_cols=241  Identities=20%  Similarity=0.177  Sum_probs=208.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGK---HGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~---~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      +.|++|++|||||++|||++++++|++   +|++|++++|+.+.++.+.+++...  +.++.++.+|+++++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            357799999999999999999999999   8999999999999999888888764  56799999999999999999999


Q ss_pred             HHH--HcCCcc--EEEEcCCCCCC--CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCCCCCCCCceEEEe
Q 022335           85 TFE--HFGKLD--ILVNAAAGNFL--VSAED-LSPNGFRTVMDIDSVGTFTMCHEALKYLKKG--GPGRSSAGGGSILNI  155 (299)
Q Consensus        85 ~~~--~~g~id--~lv~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~--~~~~~~~~~g~iv~v  155 (299)
                      +.+  .+|++|  +||||||+...  .++.+ .+.++|++.+++|+.++++++++++|.|+++  .       .|+||++
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-------~g~iv~i  154 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL-------SKTVVNI  154 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC-------EEEEEEE
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-------CceEEEE
Confidence            988  678999  99999998643  45666 6899999999999999999999999999765  3       5899999


Q ss_pred             ccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---CCchHHhHHHHhcCCCCCCC
Q 022335          156 SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---LAPDEINSKARDYMPLYKLG  232 (299)
Q Consensus       156 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~  232 (299)
                      ||..+..+.++...|++||+|+++|+++++.|++ +  |+||+|+||+++|++....   ...++..+.+....|.+++.
T Consensus       155 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  231 (259)
T 1oaa_A          155 SSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEP-S--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALV  231 (259)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCT-T--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSB
T ss_pred             cCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCC-C--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcC
Confidence            9999999999999999999999999999999995 3  9999999999986542211   01223333444556778899


Q ss_pred             CHHHHHHHHHHHcCCCCCCccCcEEEeCC
Q 022335          233 EKWDIAMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       233 ~~~dva~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      +|+|+|+++++|+++ ..++||+++.+||
T Consensus       232 ~p~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          232 DCGTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             CHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             CHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence            999999999999985 6899999999986

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=5.6e-44  Score=304.88  Aligned_cols=234  Identities=18%  Similarity=0.194  Sum_probs=202.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-e--CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIM-G--RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ||++|||||++|||++++++|+++|++|+++ +  |+.+.++.+.+++  .+  .     |+.+.++++++++++.+.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~--~-----~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG--T-----IALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT--E-----EECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC--C-----cccCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9998887776665  22  2     33377888899999999999


Q ss_pred             CccEEEEcCCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           91 KLDILVNAAAGNFL---VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        91 ~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      ++|+||||||+...   .++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+..+.++.
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~  144 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-------GASVIFITSSVGKKPLAYN  144 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCGGGTSCCTTC
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEECChhhCCCCCCc
Confidence            99999999998877   7888999999999999999999999999999998875       6999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC--CCCCchHHhHHHHh-cCCCCCCCCHHHHHHHHHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM--NKLAPDEINSKARD-YMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l  244 (299)
                      ..|++||+|+++|+++++.|++ ++||+||+|+||+++|++..  .....++....... ..|.+++.+|+|+|++++||
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l  223 (244)
T 1zmo_A          145 PLYGPARAATVALVESAAKTLS-RDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFL  223 (244)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999997 88999999999999876430  11111122233334 57888999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~  264 (299)
                      +++...+++|+.|.+|||+.
T Consensus       224 ~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HTTTTGGGTTCEEEESTTCC
T ss_pred             cCccccCccCCEEEeCCCCC
Confidence            99999999999999999964

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.2e-42  Score=293.28  Aligned_cols=232  Identities=22%  Similarity=0.273  Sum_probs=206.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.++...+++. ..+.++.++.+|++++++++++++++.+.+|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            37899999999999999999999999999999999999999888886 45778999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|.+.        .+++|+++|..+..+.++...|+
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~  152 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--------GGLALVTTSDVSARLIPYGGGYV  152 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCGGGSSCCTTCHHHH
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CCcEEEEecchhcccCCCcchHH
Confidence            9999999999888889999999999999999999999999999999654        48899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +||+|+++|+++++  ++ .+||++|+|+||+++|++.........          ..++.+|+|+|++++||+++...+
T Consensus       153 ~sKaa~~~~~~~l~--~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~~p~dva~~v~~l~~~~~~~  219 (235)
T 3l77_A          153 STKWAARALVRTFQ--IE-NPDVRFFELRPGAVDTYFGGSKPGKPK----------EKGYLKPDEIAEAVRCLLKLPKDV  219 (235)
T ss_dssp             HHHHHHHHHHHHHH--HH-CTTSEEEEEEECSBSSSTTTCCSCCCG----------GGTCBCHHHHHHHHHHHHTSCTTC
T ss_pred             HHHHHHHHHHHHHh--hc-CCCeEEEEEeCCccccccccccCCccc----------ccCCCCHHHHHHHHHHHHcCCCCC
Confidence            99999999999994  43 569999999999998765433222111          125789999999999999999999


Q ss_pred             ccCcEEEeCCcccc
Q 022335          252 VNGTTLIVDGGLWL  265 (299)
Q Consensus       252 ~~G~~i~~dgg~~~  265 (299)
                      ++|+.+..|+|+..
T Consensus       220 ~~~~~~~~~~~~~~  233 (235)
T 3l77_A          220 RVEELMLRSVYQRP  233 (235)
T ss_dssp             CCCEEEECCTTSCC
T ss_pred             ccceEEEeecccCC
Confidence            99999999999743

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=5.7e-42  Score=297.57  Aligned_cols=250  Identities=28%  Similarity=0.347  Sum_probs=215.2

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +...+++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+++.. ..++.++.+|++++++++++++++.+
T Consensus        10 ~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            34468899999999999999999999999999999999998877777666632 23799999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           88 HFGKLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .++++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|.+++       .++||++||..+..+.+
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~  161 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-------KGSIVFTASISSFTAGE  161 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-------CEEEEEECCGGGTCCCT
T ss_pred             HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-------CCeEEEEeeccccCCCC
Confidence            99999999999997643  5677889999999999999999999999999998765       68999999999998887


Q ss_pred             -CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHh--cCCCCCCCCHHHHHHHH
Q 022335          166 -YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARD--YMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       166 -~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~dva~~~  241 (299)
                       ....|++||++++.++++++.|++ ++||++++|+||++.++....... ..........  ..+.+++.+|+|+|+++
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (278)
T 2bgk_A          162 GVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV  240 (278)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHH
Confidence             789999999999999999999997 889999999999998765443322 1222222222  23557789999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++++++...+++|+.+.+|||+.+.
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          241 AYLAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHcCcccccCCCCEEEECCccccc
Confidence            9999988889999999999998774

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=3e-44  Score=306.54  Aligned_cols=232  Identities=22%  Similarity=0.293  Sum_probs=203.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++|++|||||++|||++++++|++ .|++|++++|+++.          ...++.++.+|++++++++++++.+.  ++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--hC
Confidence            3589999999999999999999999 78999999987641          12357899999999999999996543  78


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++         .++||++||..+..+.++...|
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~Y  140 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---------GASIVFNGSDQCFIAKPNSFAY  140 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---------EEEEEEECCGGGTCCCTTBHHH
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---------CcEEEEECCHHHccCCCCCchh
Confidence            9999999999988888999999999999999999999999999998864         3789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---------CchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---------APDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ++||+|+++|+++++.|++ ++||+||+|+||+++|++.....         ..++.........|.+++.+|+|+|+++
T Consensus       141 ~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v  219 (244)
T 4e4y_A          141 TLSKGAIAQMTKSLALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELV  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999997 88999999999999865432111         1122445566778999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++...+++|++|.+|||+++
T Consensus       220 ~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          220 IFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhcCccccccCCeEeECCCccC
Confidence            999999999999999999999875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-42  Score=303.84  Aligned_cols=249  Identities=31%  Similarity=0.539  Sum_probs=218.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-----LGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      ..|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++..     .+.++.++.+|+++++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            368899999999999999999999999999999999999998888888876     356899999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.+.+..       .++||++||.. ..+.
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~~iv~isS~~-~~~~  165 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-------GGSIVNIIVPT-KAGF  165 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-------CEEEEEECCCC-TTCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-------CCeEEEEEeec-ccCC
Confidence            999999999999999987667778889999999999999999999999999655543       58999999998 7788


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +....|+++|+++.+++++++.++. ++||++++|+||++.++.......  .+..........|.+++.+|+|+|++++
T Consensus       166 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~  244 (303)
T 1yxm_A          166 PLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC  244 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHH
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHH
Confidence            8899999999999999999999997 789999999999998764222221  1222333445568888999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccCC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +|+++...+++|+.+.+|||+....
T Consensus       245 ~l~~~~~~~~~G~~~~v~gG~~~~~  269 (303)
T 1yxm_A          245 FLLSPAASFITGQSVDVDGGRSLYT  269 (303)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCB
T ss_pred             HHhCcccccCCCcEEEECCCeeccc
Confidence            9999888999999999999987753

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.8e-42  Score=295.78  Aligned_cols=244  Identities=30%  Similarity=0.460  Sum_probs=217.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.+ .+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            36799999999999999999999999999999999999888888887765 46689999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++       .++||++||..+..+.++...
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~  156 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-------WGRIVNISSVVGFTGNVGQVN  156 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-------CEEEEEECCHHHHHCCTTCHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-------CcEEEEEccHHhcCCCCCCch
Confidence            9999999999987777777889999999999999999999999999998875       689999999988888888999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.++++++.+++ ++||++++|+||+++++... .. .+..........|.+++.+|+|+|+++++++++..
T Consensus       157 Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  233 (248)
T 2pnf_A          157 YSTTKAGLIGFTKSLAKELA-PRNVLVNAVAPGFIETDMTA-VL-SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELA  233 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGG-GS-CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeceecCchhh-hc-cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchh
Confidence            99999999999999999997 78999999999999766432 22 23333444556788889999999999999999878


Q ss_pred             CCccCcEEEeCCccc
Q 022335          250 KYVNGTTLIVDGGLW  264 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~  264 (299)
                      .+++|+.+.+|||+.
T Consensus       234 ~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          234 SYITGEVIHVNGGMF  248 (248)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             hcCCCcEEEeCCCcC
Confidence            899999999999963

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.7e-42  Score=298.82  Aligned_cols=247  Identities=23%  Similarity=0.366  Sum_probs=208.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.++
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            578999999999999999999999999999999999988877776665   55799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCC------CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           91 KLDILVNAAAGNFLVSAE------DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      ++|+||||||+....++.      +.+.++|++.+++|+.+++++++++.|.|+++... .....++||++||..+..+.
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD-QGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC-TTSCCEEEEEECCTHHHHCC
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc-cCCCCcEEEEeCChhhcCCC
Confidence            999999999987654443      36889999999999999999999999999876211 01126899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  243 (299)
                      ++...|++||+|++.++++++.+++ ++||++|+|+||+++|+... ... +..........|. +++.+|+|+|+++++
T Consensus       165 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~  241 (265)
T 2o23_A          165 VGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLLT-SLP-EKVCNFLASQVPFPSRLGDPAEYAHLVQA  241 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccccCcccc-ccC-HHHHHHHHHcCCCcCCCCCHHHHHHHHHH
Confidence            9999999999999999999999997 88999999999999876432 221 2222333455677 789999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |++  ..+++|+.+.+|||+++.
T Consensus       242 l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          242 IIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHH--CTTCCSCEEEESTTCCCC
T ss_pred             Hhh--cCccCceEEEECCCEecC
Confidence            995  478999999999998864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-42  Score=299.00  Aligned_cols=247  Identities=30%  Similarity=0.436  Sum_probs=209.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-------CcEEEEEcCCCCHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-------IKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-------~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+       .++.++.+|+++.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4679999999999999999999999999999999999988887777665444       578899999999999999999


Q ss_pred             HHHHHcCCc-cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           84 STFEHFGKL-DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        84 ~~~~~~g~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      ++.+.++++ |+||||||+....++.+.+.++|++.+++|+.+++++++++.|.|.+++.      .++||++||..+..
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~g~iv~isS~~~~~  157 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC------RGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCTHHHH
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC------CceEEEECChhhcc
Confidence            999999999 99999999887777788899999999999999999999999999987531      37999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.++...|++||++++.++++++.+++ ++||++++|+||++.++... .. ............|.+++.+|+|+|++++
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~  234 (264)
T 2pd6_A          158 GNVGQTNYAASKAGVIGLTQTAARELG-RHGIRCNSVLPGFIATPMTQ-KV-PQKVVDKITEMIPMGHLGDPEDVADVVA  234 (264)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHH
T ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeecccccchh-hc-CHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence            999999999999999999999999997 88999999999999876432 22 1222333444567788899999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +++++...+++|+.+.+|||+.+.
T Consensus       235 ~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          235 FLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC---
T ss_pred             HHcCCcccCCCCCEEEECCCceec
Confidence            999988889999999999998763

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=7.2e-45  Score=323.53  Aligned_cols=244  Identities=21%  Similarity=0.270  Sum_probs=205.8

Q ss_pred             CCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChh---------HHHHHHHHHHhcC---CcEEEEEcCCCCH--H
Q 022335           13 KGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQ---------VLDAAVSALRSLG---IKAVGFEGDVRRQ--E   76 (299)
Q Consensus        13 ~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~---------~~~~~~~~~~~~~---~~v~~~~~Dl~~~--~   76 (299)
                      ++|++|||||++  |||+++|++|+++|++|+++++++.         .++.........+   ..+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  9999999999999999998877652         1222111111111   2478899999988  8


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEEcCCCC--CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022335           77 ------------------HAKKVVESTFEHFGKLDILVNAAAGN--FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY  136 (299)
Q Consensus        77 ------------------~v~~~~~~~~~~~g~id~lv~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  136 (299)
                                        +++++++++.+.+|++|+||||||+.  ...++.+.+.++|++++++|+.++++++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999974  3578888999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCceEEEeccccccccCCCch-HHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCCCCCC
Q 022335          137 LKKGGPGRSSAGGGSILNISATLHYTASWYQI-HVAAAKAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGMNKLA  214 (299)
Q Consensus       137 m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~-~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~~~~~  214 (299)
                      |++         .|+||++||..+..+.+++. .|++||+|+.+|+++|+.|++ + +||+||+|+||+|+|++......
T Consensus       161 m~~---------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~-~~~gI~vn~v~PG~v~T~~~~~~~~  230 (329)
T 3lt0_A          161 MKP---------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAINK  230 (329)
T ss_dssp             EEE---------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCHHHHTCC-
T ss_pred             Hhh---------CCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEEEecceeechhHhhhhh
Confidence            975         38999999999999999985 999999999999999999997 7 79999999999998765332210


Q ss_pred             -------------------------------------------chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          215 -------------------------------------------PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       215 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                                                                 .++..+......|.+++.+|+|+|++++||+|+.+.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~  310 (329)
T 3lt0_A          231 LNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRA  310 (329)
T ss_dssp             -----------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhcc
Confidence                                                       0012455667789999999999999999999999999


Q ss_pred             ccCcEEEeCCccccC
Q 022335          252 VNGTTLIVDGGLWLS  266 (299)
Q Consensus       252 ~~G~~i~~dgg~~~~  266 (299)
                      +||++|.+|||+++.
T Consensus       311 itG~~i~vdGG~~~~  325 (329)
T 3lt0_A          311 ITGQTIYVDNGLNIM  325 (329)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             ccCcEEEEcCCeeEE
Confidence            999999999999873

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.1e-43  Score=301.67  Aligned_cols=242  Identities=21%  Similarity=0.239  Sum_probs=200.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH-F   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~-~   89 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            367999999999999999999999999999999999999988888888777778999999999999999999999886 8


Q ss_pred             CCccEEEEcCC--CC-----CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           90 GKLDILVNAAA--GN-----FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        90 g~id~lv~~ag--~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      |++|+||||||  +.     ...++.+.+.++|++++++|+.++++++++++|.|.+++       .|+||++||..+..
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~  154 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-------QGLIVVISSPGSLQ  154 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-------CCEEEEECCGGGTS
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-------CcEEEEEcChhhcC
Confidence            99999999995  32     245677888899999999999999999999999998765       68999999998877


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHh-HHHH--hcCCCCCCCCHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEIN-SKAR--DYMPLYKLGEKWDIAM  239 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~dva~  239 (299)
                      +. ....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......+... ....  ...+.++..+|+|+|+
T Consensus       155 ~~-~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~  232 (260)
T 2qq5_A          155 YM-FNVPYGVGKAACDKLAADCAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGK  232 (260)
T ss_dssp             CC-SSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHH
T ss_pred             CC-CCCchHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHH
Confidence            54 468999999999999999999997 88999999999999876543222111110 0001  1234555678999999


Q ss_pred             HHHHHcCCCC-CCccCcEEEeCC
Q 022335          240 AALYLTSDTG-KYVNGTTLIVDG  261 (299)
Q Consensus       240 ~~~~l~s~~~-~~~~G~~i~~dg  261 (299)
                      +++||+++.. .++||++|..|+
T Consensus       233 ~v~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          233 CVVALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHHHHTCTTGGGGTTCEEEHHH
T ss_pred             HHHHHhcCcccccccceeechhh
Confidence            9999999876 489999998763

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.8e-43  Score=302.30  Aligned_cols=235  Identities=17%  Similarity=0.265  Sum_probs=205.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+ +...+.++..+     +.++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999888777665 65556565544     677888899999999999999


Q ss_pred             EEEcCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           95 LVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        95 lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ||||||+. ...++.+.+.++|++.+++|+.++++++++++|.|++++       .|+||++||..+..+.++...|++|
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~s  148 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-------SGHIIFITSATPFGPWKELSTYTSA  148 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCSTTTSCCTTCHHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEECCcccccCCCCchHHHHH
Confidence            99999987 667788899999999999999999999999999998876       6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc---------CCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPI---------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      |+|+++|+++++.|++ ++||+||+|+||++         +|++...   .++.........|.+++.+|+|+|++++||
T Consensus       149 K~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  224 (254)
T 1zmt_A          149 RAGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFL  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh-hcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999997 88999999999999         5432211   123333445567888999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +++...+++|+.+.+|||+.+.
T Consensus       225 ~s~~~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          225 ASGSCDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             HTTSCGGGTTCEEEESTTCCCC
T ss_pred             hCcccCCccCCEEEECCCchhh
Confidence            9998999999999999998764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=3e-43  Score=307.96  Aligned_cols=263  Identities=16%  Similarity=0.153  Sum_probs=211.3

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      |+...+.++.+|+||++|||||++|||++++++|+++|++|++++|+.+.++...+++   +.++.++.+|+++.+++++
T Consensus         3 m~~~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~   79 (291)
T 3rd5_A            3 MTGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRR   79 (291)
T ss_dssp             -CCCCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHH
T ss_pred             CCCCChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHH
Confidence            6666777788899999999999999999999999999999999999998877765544   5689999999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc
Q 022335           81 VVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH  160 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~  160 (299)
                      +++++    +++|+||||||+...  ..+.+.++|++++++|+.++++++++++|.|.           .+||++||..+
T Consensus        80 ~~~~~----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-----------~riv~isS~~~  142 (291)
T 3rd5_A           80 FADGV----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLT-----------DRVVTVSSMAH  142 (291)
T ss_dssp             HHHTC----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE-----------EEEEEECCGGG
T ss_pred             HHHhc----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hheeEeechhh
Confidence            88865    799999999998643  35567788999999999999999999999884           47999999988


Q ss_pred             ccc-------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEeCCccCCCCCCCCCCchHHhHHHHhc
Q 022335          161 YTA-------------SWYQIHVAAAKAAVDAITRNLALEWGADYD--IRVNGIAPGPIGDTPGMNKLAPDEINSKARDY  225 (299)
Q Consensus       161 ~~~-------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~g--i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~  225 (299)
                      ..+             .++...|++||+|++.|+++++.+++ ++|  |++|+|+||+|+|++.... . +..... ...
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~PG~v~T~~~~~~-~-~~~~~~-~~~  218 (291)
T 3rd5_A          143 WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLT-AAGSPLRALAAHPGYSHTNLQGAS-G-RKLGDA-LMS  218 (291)
T ss_dssp             TTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECCSGGGSCC-----------------
T ss_pred             ccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHh-hCCCCEEEEEeeCCCCcccccccc-c-hHHHHH-HHH
Confidence            754             35678999999999999999999997 667  9999999999987654322 1 111111 222


Q ss_pred             CCCCCCCC-HHHHHHHHHHHcCCCCCCccCcEEEeCCccccC------CCCCCchhHHHHHhHhhhhccCC
Q 022335          226 MPLYKLGE-KWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS------RPRHLPKDAVKQLSRTVEKRSRD  289 (299)
Q Consensus       226 ~~~~~~~~-~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~------~~~~~~~~~~~~~~~~~~~~~~~  289 (299)
                      .+..+... |+|+|++++|++++  .+++|+++.+|||+...      .+...++...+++|+.+++..+.
T Consensus       219 ~~~~~~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  287 (291)
T 3rd5_A          219 AATRVVATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKT  287 (291)
T ss_dssp             ------CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHcc
Confidence            34455554 99999999999987  48999999999998752      34566788899999999988765

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-42  Score=300.50  Aligned_cols=243  Identities=21%  Similarity=0.227  Sum_probs=201.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+ |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++... .++.++.+|++++++++++++++.+.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3566 99999999999999999999999999999999999888888877543 578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCc-eEEEeccccccccCCCc
Q 022335           90 GKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGG-SILNISATLHYTASWYQ  167 (299)
Q Consensus        90 g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g-~iv~vsS~~~~~~~~~~  167 (299)
                      |++|+||||||+... .++.+.+.++|++++++|+.++++++++++|.|++++       .| +||++||..+..+.++.
T Consensus        96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-------~g~~IV~isS~~~~~~~~~~  168 (272)
T 2nwq_A           96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-------AGASIVNLGSVAGKWPYPGS  168 (272)
T ss_dssp             SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-------TTCEEEEECCGGGTSCCTTC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCcEEEEeCCchhccCCCCC
Confidence            999999999998764 7788899999999999999999999999999998875       57 99999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|++.|+++++.|++ ++||++|+|+||+++|++.........  .............+|+|+|++++||+++
T Consensus       169 ~~Y~asKaa~~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~s~  245 (272)
T 2nwq_A          169 HVYGGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIMNQ  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCT-TSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHHTS
T ss_pred             chHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999999997 889999999999998765322111110  0011111122357999999999999986


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                       ..+++|+.|.+++|...
T Consensus       246 -~~~~~g~~i~v~~~~~~  262 (272)
T 2nwq_A          246 -PAHLNINSLEIMPVSQS  262 (272)
T ss_dssp             -CTTEEEEEEEEEETTEE
T ss_pred             -CccCccceEEEeeccCc
Confidence             57899999999988543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.9e-42  Score=296.05  Aligned_cols=249  Identities=24%  Similarity=0.375  Sum_probs=217.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +|++|++|||||++|||++++++|+++|++|++++|+ ++.++.+.+++...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999999 788888888887777789999999999999999999999999


Q ss_pred             CCccEEEEcCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-cCCCc
Q 022335           90 GKLDILVNAAAG-NFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-ASWYQ  167 (299)
Q Consensus        90 g~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~  167 (299)
                      +++|+||||||+ ....++.+.+.++|++.+++|+.++++++++++|.|.+....  ....++||++||..+.. +.++.
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~  161 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKA--SGQTSAVISTGSIAGHTGGGPGA  161 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH--HTSCEEEEEECCTHHHHCCCTTC
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccC--CCCCcEEEEecchhhccCCCCCc
Confidence            999999999997 555677788999999999999999999999999999764200  00138999999999887 78889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||++++.+++.++.+++ ++||++++|+||++.++.... . .+..........|.+++.+|+|+|+++++++++
T Consensus       162 ~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  238 (258)
T 3afn_B          162 GLYGAAKAFLHNVHKNWVDFHT-KDGVRFNIVSPGTVDTAFHAD-K-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSGGGTT-C-CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhc-ccCeEEEEEeCCCcccccccc-c-CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999997 889999999999998664332 2 234445555667888899999999999999987


Q ss_pred             CCC-CccCcEEEeCCccc
Q 022335          248 TGK-YVNGTTLIVDGGLW  264 (299)
Q Consensus       248 ~~~-~~~G~~i~~dgg~~  264 (299)
                      ... +++|+.+++|||+.
T Consensus       239 ~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          239 LASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHTTCCSEEEEESTTSS
T ss_pred             chhccccCCEEeECCCcc
Confidence            666 89999999999975

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=7.7e-42  Score=291.31  Aligned_cols=241  Identities=29%  Similarity=0.408  Sum_probs=215.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEE-EEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVG-FEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~-~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+.++.+.+++...+.++.+ +.+|+++.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 89998888888888777767777 999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++.+       .++||++||..+..+.++...|+
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~  153 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-------FGRIVNITSVVGILGNPGQANYV  153 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCTHHHHCCSSBHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-------CCEEEEEeChhhccCCCCCcchH
Confidence            99999999988777778889999999999999999999999999998875       68999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +||++++.++++++.++. ++||++++|+||++.++... .. ............|.+++.+|+|+|+++++++++...+
T Consensus       154 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  230 (245)
T 2ph3_A          154 ASKAGLIGFTRAVAKEYA-QRGITVNAVAPGFIETEMTE-RL-PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGY  230 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TS-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHH-HcCeEEEEEEEEeecCcchh-hc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccc
Confidence            999999999999999997 78999999999999765432 22 2333444555677888999999999999999987789


Q ss_pred             ccCcEEEeCCccc
Q 022335          252 VNGTTLIVDGGLW  264 (299)
Q Consensus       252 ~~G~~i~~dgg~~  264 (299)
                      ++|+.+.+|||+.
T Consensus       231 ~~G~~~~v~gg~~  243 (245)
T 2ph3_A          231 ITGQTLCVDGGLT  243 (245)
T ss_dssp             CCSCEEEESTTCS
T ss_pred             ccCCEEEECCCCC
Confidence            9999999999975

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=6.4e-42  Score=291.82  Aligned_cols=240  Identities=27%  Similarity=0.379  Sum_probs=207.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.    .+.++.+|++++++++++++    .++
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~~   75 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SVG   75 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TCC
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----HcC
Confidence            4679999999999999999999999999999999999887776655432    35677999999999988876    568


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++++++++.+.|.++..      .++||++||..+..+.++...|
T Consensus        76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~Y  149 (244)
T 3d3w_A           76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV------PGAIVNVSSQCSQRAVTNHSVY  149 (244)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTSCCTTBHHH
T ss_pred             CCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CcEEEEeCchhhccCCCCCchH
Confidence            9999999999877777788899999999999999999999999999987531      3899999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||++++.++++++.|++ ++||++++|+||++.|+........+.....+....|.+++.+|+|+|+++++++++...
T Consensus       150 ~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (244)
T 3d3w_A          150 CSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999997 789999999999998764332222223334455667888999999999999999998788


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|+.+++|||++.
T Consensus       229 ~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          229 MTTGSTLPVEGGFWA  243 (244)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCCCCEEEECCCccC
Confidence            999999999999875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=5.5e-42  Score=293.23  Aligned_cols=235  Identities=24%  Similarity=0.239  Sum_probs=196.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |++|||||++|||++++++|+++|++|++++|+.+.++.+.+++   +.++.++.+|++++++++++++++.+.+|++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            58999999999999999999999999999999998888777666   347899999999999999999999999999999


Q ss_pred             EEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           95 LVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        95 lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      ||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.++...|++|
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-------~g~iv~isS~~~~~~~~~~~~Y~as  150 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-------HGHIINIGSTAGSWPYAGGNVYGAT  150 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CceEEEEccchhccCCCCCchHHHH
Confidence            999999863 46777889999999999999999999999999998875       6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC-CCCCCCCCC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIG-DTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      |+|+++|+++++.|++ ++||+||+|+||+++ |++...... ......   .........+|+|+|++++||+++ ..+
T Consensus       151 Kaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~---~~~~~~~~~~p~dvA~~v~~l~s~-~~~  225 (248)
T 3asu_A          151 KAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE---KTYQNTVALTPEDVSEAVWWVSTL-PAH  225 (248)
T ss_dssp             HHHHHHHHHHHHHHTT-TSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHS-CTT
T ss_pred             HHHHHHHHHHHHHHhh-hcCcEEEEEeccccccCcchhhcccCchHHHH---HHHhccCCCCHHHHHHHHHHHhcC-Ccc
Confidence            9999999999999997 889999999999998 664321111 111111   111112346999999999999986 578


Q ss_pred             ccCcEEEeCCccc
Q 022335          252 VNGTTLIVDGGLW  264 (299)
Q Consensus       252 ~~G~~i~~dgg~~  264 (299)
                      ++|+.+.++++..
T Consensus       226 ~~g~~i~v~~~~~  238 (248)
T 3asu_A          226 VNINTLEMMPVTQ  238 (248)
T ss_dssp             CCCCEEEECCTTC
T ss_pred             ceeeEEEEccccc
Confidence            9999999998743

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=3.9e-42  Score=317.29  Aligned_cols=242  Identities=24%  Similarity=0.326  Sum_probs=207.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++||++|||||++|||++++++|+++|++|++++|+... +.+.+...+.  .+.++.||+++.++++++++++.+.++
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999987532 2233333332  356899999999999999999999998


Q ss_pred             C-ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 K-LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      + +|+||||||+.....+.+.+.++|+.++++|+.+++++.+++.+.|.++.       .++||++||..+..+.+++..
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-------~g~iV~iSS~a~~~g~~g~~~  359 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-------GGRVIGLSSMAGIAGNRGQTN  359 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-------TCEEEEECCHHHHHCCTTCHH
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-------CCEEEEEeChHhCCCCCCCHH
Confidence            6 99999999998888889999999999999999999999999999987755       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+++++|+++++.+++ ++||+||+|+||+++|++.. ... ....+......++.+..+|+|+|+++.||+|+.+
T Consensus       360 YaasKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~-~~~-~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a  436 (454)
T 3u0b_A          360 YATTKAGMIGLAEALAPVLA-DKGITINAVAPGFIETKMTE-AIP-LATREVGRRLNSLFQGGQPVDVAELIAYFASPAS  436 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEcCcccChhhh-hcc-hhhHHHHHhhccccCCCCHHHHHHHHHHHhCCcc
Confidence            99999999999999999997 88999999999999876543 221 1222334455678888999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .++||++|.+|||..+
T Consensus       437 ~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          437 NAVTGNTIRVCGQAML  452 (454)
T ss_dssp             TTCCSCEEEESSSBSC
T ss_pred             CCCCCcEEEECCcccc
Confidence            9999999999999876

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=7e-42  Score=302.66  Aligned_cols=255  Identities=23%  Similarity=0.311  Sum_probs=218.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe---------CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG---------RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~---------r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .|+||++|||||++|||++++++|+++|++|++++         |+.+.++...+++...+..+   .+|+++.++++++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~~   82 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEKL   82 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHHH
Confidence            47899999999999999999999999999999964         56778888888887665433   4799999999999


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      ++++.+.++++|+||||||+....++.+.+.++|+..+++|+.++++++++++|+|++++       .++||++||..+.
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-------~grIV~vsS~~~~  155 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-------YGRIIMTASASGI  155 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEECChhhc
Confidence            999999999999999999988777778889999999999999999999999999999876       6899999999998


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+.++...|++||+|+..|+++++.+++ ++||+||+|+||++ |++..... ++...          ...+|+|+|.++
T Consensus       156 ~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~vn~v~PG~~-t~~~~~~~-~~~~~----------~~~~p~dvA~~~  222 (319)
T 1gz6_A          156 YGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAG-SRMTETVM-PEDLV----------EALKPEYVAPLV  222 (319)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECC-STTTGGGS-CHHHH----------HHSCGGGTHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEeCCCc-cccccccC-Chhhh----------ccCCHHHHHHHH
Confidence            8888999999999999999999999997 88999999999998 54322111 11111          135899999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC-------------CCCCCchhHHHHHhHhhhhccCC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS-------------RPRHLPKDAVKQLSRTVEKRSRD  289 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~  289 (299)
                      +||+++. .+++|+.+.+|||+...             .+...++....++|+.+++..+.
T Consensus       223 ~~l~s~~-~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  282 (319)
T 1gz6_A          223 LWLCHES-CEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNA  282 (319)
T ss_dssp             HHHTSTT-CCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTC
T ss_pred             HHHhCch-hhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhccccc
Confidence            9999874 57999999999997641             24456778899999999998765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1e-41  Score=295.29  Aligned_cols=244  Identities=27%  Similarity=0.447  Sum_probs=216.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..+++|++|||||++|||++++++|+++|++|++++| +.+.++.+.+++...+.++.++.+|++++++++++++++.+.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 788888888888877778999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCCc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~  167 (299)
                      ++++|+||||||+....++.+.+.++|++.+++|+.+++++++++++.|+ +        +++||++||..+. .+.++.
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~--------~~~iv~~sS~~~~~~~~~~~  167 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R--------GGRIILTSSIAAVMTGIPNH  167 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E--------EEEEEEECCGGGTCCSCCSC
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--------CCEEEEEcChHhccCCCCCC
Confidence            99999999999988777777889999999999999999999999999986 2        4899999999988 788889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC-----------CCCchHHhHHHHhcCCCCCCCCHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN-----------KLAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                      ..|++||++++.++++++.+++ .+||++++|+||++.++....           ....++....+....+.+++.+|+|
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  246 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPAD  246 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHH
Confidence            9999999999999999999997 889999999999997654221           1221344445556678889999999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +|+++++++++...+++|+.+++|||+
T Consensus       247 va~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          247 IGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhCcccccccCcEEEecCCc
Confidence            999999999988888999999999996

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.6e-41  Score=323.26  Aligned_cols=230  Identities=27%  Similarity=0.383  Sum_probs=199.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++.+++.  ++++.+++.+.+.++..+.+|++  ++++++++++.+++|
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G  394 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYG  394 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHS
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcC
Confidence            58899999999999999999999999999999998743  35667777776777888889984  556788999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|+.++++|+.|+++++++++|+|+++.       .|+||++||..+..+.+++..|
T Consensus       395 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-------~G~IVnisS~ag~~~~~~~~~Y  467 (604)
T 2et6_A          395 TIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-------FGRIINITSTSGIYGNFGQANY  467 (604)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCHHHHSCCTTBHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEECChhhccCCCCChhH
Confidence            999999999998778899999999999999999999999999999999876       6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|+.+|+++|+.|++ ++||+||+|+||. +|++..... .++          .....+|+|+|.+++||+|+.+.
T Consensus       468 ~asKaal~~lt~~la~El~-~~gIrVn~v~PG~-~T~m~~~~~-~~~----------~~~~~~pe~vA~~v~~L~s~~~~  534 (604)
T 2et6_A          468 SSSKAGILGLSKTMAIEGA-KNNIKVNIVAPHA-ETAMTLSIM-REQ----------DKNLYHADQVAPLLVYLGTDDVP  534 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhC-ccCeEEEEEcCCC-CCccccccC-chh----------hccCCCHHHHHHHHHHHhCCccC
Confidence            9999999999999999997 8899999999995 665432111 111          12346999999999999999888


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                       +||++|.+|||+..
T Consensus       535 -itG~~~~vdGG~~~  548 (604)
T 2et6_A          535 -VTGETFEIGGGWIG  548 (604)
T ss_dssp             -CCSCEEEEETTEEE
T ss_pred             -CCCcEEEECCCeeE
Confidence             99999999999765

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-41  Score=285.49  Aligned_cols=233  Identities=18%  Similarity=0.241  Sum_probs=211.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +|++|||||++|||++++++|+++|+       +|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            78999999999999999999999999       99999999998888888887767789999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++       .++||++||..+..+.++
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~  154 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-------SGHIFFITSVAATKAFRH  154 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTT
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-------CCEEEEEecchhcCCCCC
Confidence            9999999999999988777788889999999999999999999999999998875       689999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ...|++||++++.|+++++.+++ ++||++++|+||++.|++... ...+.          ..++.+|+|+|++++++++
T Consensus       155 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~~~~----------~~~~~~~~dva~~~~~l~~  222 (244)
T 2bd0_A          155 SSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMWGK-VDDEM----------QALMMMPEDIAAPVVQAYL  222 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTTCC-CCSTT----------GGGSBCHHHHHHHHHHHHT
T ss_pred             CchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEECCCccchhhhh-ccccc----------cccCCCHHHHHHHHHHHHh
Confidence            99999999999999999999996 889999999999998765432 22111          1257899999999999999


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +...+++|+.+..+++..+
T Consensus       223 ~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          223 QPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             SCTTEEEEEEEEEETTCCC
T ss_pred             CCccccchheEEecccccc
Confidence            9999999999999998766

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.5e-42  Score=327.77  Aligned_cols=231  Identities=27%  Similarity=0.375  Sum_probs=200.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK---------QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++++.         +.++++.+++...+.++.   +|+++.++++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~   81 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKI   81 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHH
Confidence            47899999999999999999999999999999998765         667778888877665432   588888889999


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      ++++.+.||++|+||||||+....++.+.+.++|++++++|+.|+++++++++|+|++++       .|+||++||..+.
T Consensus        82 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-------~G~IVnisS~ag~  154 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-------YGRIVNTSSPAGL  154 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CCEEEEECCHHHc
Confidence            999999999999999999998778899999999999999999999999999999999876       6999999999999


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+.+++..|++||+|+.+|+++|+.|++ ++||+||+|+|| +.|++..... +++.    .      ...+|+|+|.++
T Consensus       155 ~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~Pg-~~T~m~~~~~-~~~~----~------~~~~pe~vA~~v  221 (604)
T 2et6_A          155 YGNFGQANYASAKSALLGFAETLAKEGA-KYNIKANAIAPL-ARSRMTESIM-PPPM----L------EKLGPEKVAPLV  221 (604)
T ss_dssp             HCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-CCCHHHHTTS-CHHH----H------TTCSHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEccC-CcCccccccC-Chhh----h------ccCCHHHHHHHH
Confidence            9999999999999999999999999997 889999999998 5554322111 1111    0      236999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+++. .++||++|.+|||+..
T Consensus       222 ~~L~s~~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          222 LYLSSAE-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             HHHTSSS-CCCCSCEEEEETTEEE
T ss_pred             HHHhCCc-ccCCCCEEEECCCeEE
Confidence            9999988 9999999999999753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=6.2e-43  Score=309.29  Aligned_cols=248  Identities=26%  Similarity=0.300  Sum_probs=198.4

Q ss_pred             CCCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCChhH------H-HHHHHHHHhc--CC---cEEEEEcCC---
Q 022335           10 DILKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRKQV------L-DAAVSALRSL--GI---KAVGFEGDV---   72 (299)
Q Consensus        10 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~~~------~-~~~~~~~~~~--~~---~v~~~~~Dl---   72 (299)
                      ..|+||++|||||  ++|||++++++|+++|++|++++|++..      . +...+++.+.  +.   .+.++.+|+   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            3478999999999  8999999999999999999999986410      0 0011112221  11   124444443   


Q ss_pred             ---------C--------CHHHHHHHHHHHHHHcCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHH
Q 022335           73 ---------R--------RQEHAKKVVESTFEHFGKLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEA  133 (299)
Q Consensus        73 ---------~--------~~~~v~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  133 (299)
                               +        ++++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++++++|+.+++++++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  164 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF  164 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence                     3        256899999999999999999999999763  467788899999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCceEEEeccccccccCCCc-hHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCCC
Q 022335          134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-IHVAAAKAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGMN  211 (299)
Q Consensus       134 ~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~~  211 (299)
                      +|+|++         +|+||++||..+..+.+++ ..|++||+|+++|+++++.|++ + +||+||+|+||+|+|++...
T Consensus       165 ~~~m~~---------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v~T~~~~~  234 (315)
T 2o2s_A          165 GPIMNE---------GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAG-QKYGVRVNAISAGPLKSRAASA  234 (315)
T ss_dssp             STTEEE---------EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECCCCCHHHHH
T ss_pred             HHHHhc---------CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEEecccccchhhhh
Confidence            999854         3899999999999888887 5899999999999999999996 5 79999999999998764221


Q ss_pred             CC--Cc----hHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          212 KL--AP----DEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       212 ~~--~~----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      ..  ..    +...+......|.+++.+|+|+|++++||+++...++||++|.+|||+.+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  296 (315)
T 2o2s_A          235 IGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAMG  296 (315)
T ss_dssp             TTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             ccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeeec
Confidence            11  01    1222233455788999999999999999999989999999999999998743

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=3.7e-42  Score=289.70  Aligned_cols=216  Identities=30%  Similarity=0.389  Sum_probs=191.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|++|||||++|||++++++|+++|++|++++|+.+                    +|+++++++++++++    ++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~----~g   58 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFET----IG   58 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHH----HC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHH----hC
Confidence            467999999999999999999999999999999999864                    899999999998875    48


Q ss_pred             CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+. ...++.+.+.++|++.+++|+.++++++++++|+|++         +|+||++||..+..+.++...
T Consensus        59 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~  129 (223)
T 3uce_A           59 AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---------GGSITLTSGMLSRKVVANTYV  129 (223)
T ss_dssp             SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---------EEEEEEECCGGGTSCCTTCHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---------CeEEEEecchhhccCCCCchH
Confidence            999999999987 5578889999999999999999999999999999854         489999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch---HHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD---EINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      |++||+|+++|+++++.|++ +  |+||+|+||+++|+... .....   ...+......|.+++.+|+|+|++++++++
T Consensus       130 Y~asK~a~~~~~~~la~e~~-~--i~vn~v~PG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~  205 (223)
T 3uce_A          130 KAAINAAIEATTKVLAKELA-P--IRVNAISPGLTKTEAYK-GMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ  205 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-T--SEEEEEEECSBCSGGGT-TSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhc-C--cEEEEEEeCCCcchhhh-hcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc
Confidence            99999999999999999996 5  99999999999866433 33322   233455677899999999999999999997


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                        ..+++|++|.+|||+.+
T Consensus       206 --~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          206 --NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             --CTTCCSCEEEESTTGGG
T ss_pred             --CCCCCCcEEEecCCeec
Confidence              47899999999999876

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-41  Score=291.11  Aligned_cols=235  Identities=23%  Similarity=0.341  Sum_probs=198.6

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .....++||++|||||++|||++++++|+++|++|++++|+++..+    ++   + ++.++ +|+  .++++++++++ 
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~-   79 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV-   79 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS-
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh-
Confidence            3345788999999999999999999999999999999999974322    22   2 57777 999  55666666554 


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                         .++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++       .++||++||..+..+.++
T Consensus        80 ---~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~  149 (249)
T 1o5i_A           80 ---KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-------WGRIVAITSFSVISPIEN  149 (249)
T ss_dssp             ---CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTT
T ss_pred             ---cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-------CcEEEEEcchHhcCCCCC
Confidence               4899999999987777888899999999999999999999999999999876       689999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhH-HHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS-KARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      ...|++||+|++.|+++++.|++ ++||++|+|+||+++|++... .. +.... ......|.+++.+|+|+|+++++|+
T Consensus       150 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~~-~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~  226 (249)
T 1o5i_A          150 LYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKE-LL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLC  226 (249)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHH-HS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCccCcccc-cc-hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999997 889999999999998764321 11 12222 4455678889999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++...+++|+.+.+|||+...
T Consensus       227 s~~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          227 SEKASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             SGGGTTCCSCEEEESTTCCCC
T ss_pred             CccccCCCCCEEEECCCcccC
Confidence            988899999999999998653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-41  Score=297.08  Aligned_cols=231  Identities=23%  Similarity=0.263  Sum_probs=197.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.+|+++.++++++++++.+.+
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            35889999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++.      .|+||++||..+..+.++...
T Consensus       107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~------~g~iv~isS~~~~~~~~~~~~  180 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT------GGHIAFTASFAGLVPNAGLGT  180 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS------CEEEEEECCGGGTSCCTTBHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC------CcEEEEeCchhhcCCCCCchH
Confidence            99999999999988888889999999999999999999999999999988642      489999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--------CchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--------APDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      |++||+|+++|+++++.|++ ++||+|++|+||+++|++.....        ........+..........+|+|+|+.+
T Consensus       181 Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i  259 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVK-PNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT  259 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHH
Confidence            99999999999999999997 88999999999999876422100        0000001111112223467999999999


Q ss_pred             HHHcCC
Q 022335          242 LYLTSD  247 (299)
Q Consensus       242 ~~l~s~  247 (299)
                      +..+..
T Consensus       260 ~~~l~~  265 (301)
T 3tjr_A          260 ADAILA  265 (301)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998853

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-41  Score=285.23  Aligned_cols=240  Identities=25%  Similarity=0.336  Sum_probs=207.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|++|++|||||++|||++++++|+++|++|++++|+.+.++...+++    ..+.++.+|++++++++++++    .++
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~~   75 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GIG   75 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TCC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----HcC
Confidence            467999999999999999999999999999999999988776655433    246677999999999988876    568


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.+++++++++++.|.+++.      .++||++||..+..+.++...|
T Consensus        76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~------~~~iv~~sS~~~~~~~~~~~~Y  149 (244)
T 1cyd_A           76 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV------PGSIVNVSSMVAHVTFPNLITY  149 (244)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTSCCTTBHHH
T ss_pred             CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC------CeEEEEEcchhhcCCCCCcchh
Confidence            9999999999887777888899999999999999999999999999987531      3899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||++++.++++++.+++ .+||++++|+||++.++........+..........|.+++.+++|+|+++++++++...
T Consensus       150 ~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  228 (244)
T 1cyd_A          150 SSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhh
Confidence            9999999999999999997 789999999999997654321222333434555667888999999999999999998888


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      +++|+.+.+|||+.+
T Consensus       229 ~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          229 STSGGGILVDAGYLA  243 (244)
T ss_dssp             TCCSSEEEESTTGGG
T ss_pred             cccCCEEEECCCccC
Confidence            999999999999864

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.9e-40  Score=293.69  Aligned_cols=237  Identities=20%  Similarity=0.248  Sum_probs=193.7

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI--KAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.  ++.++.+|++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999999999998877655  79999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                      +.++++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|.++... .....|+||++||..+..+.++
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKA-GEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHT-TSCCCCEEEEECCGGGTCCCSS
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhc-cCCCCcEEEEecccccccCCCC
Confidence            999999999999999888888899999999999999999999999999999875100 0011689999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHH---------HHhcCCCC-CCCCHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK---------ARDYMPLY-KLGEKWD  236 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~d  236 (299)
                      ...|++||+|+++|+++++.|+. ++||++++|+||+|+|+..............         ........ ...+|++
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~  240 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV  240 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHH
Confidence            99999999999999999999997 8899999999999987654322111110000         00001111 1269999


Q ss_pred             HHHHHHHHcCC
Q 022335          237 IAMAALYLTSD  247 (299)
Q Consensus       237 va~~~~~l~s~  247 (299)
                      +|+.++..+..
T Consensus       241 vA~~~~~al~~  251 (319)
T 3ioy_A          241 IGARVIEAMKA  251 (319)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHc
Confidence            99999998854

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=6e-42  Score=305.46  Aligned_cols=258  Identities=13%  Similarity=0.031  Sum_probs=210.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeCChhHH------------HHHHHHHHhcCCcEEEEEcCCCCHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVL------------DAAVSALRSLGIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   79 (299)
                      .+|++|||||++|||+++|+.|++ +|++|++++++.+..            +...+++.+.+.++..+.+|++++++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            599999999999999999999999 999999999876542            2234456667788999999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhhHH
Q 022335           80 KVVESTFEHFGKLDILVNAAAGN-------------FLVSA---------------------EDLSPNGFRTVMDIDSVG  125 (299)
Q Consensus        80 ~~~~~~~~~~g~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~  125 (299)
                      ++++++.+.+|++|+||||||+.             ...++                     .+.+.++|++++++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            99999999999999999999974             23444                     678999999999999999


Q ss_pred             HH-HHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc--hHHHHHHHHHHHHHHHHHHHhcCCC-CeEEEEEeC
Q 022335          126 TF-TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ--IHVAAAKAAVDAITRNLALEWGADY-DIRVNGIAP  201 (299)
Q Consensus       126 ~~-~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~e~~~~~-gi~v~~i~p  201 (299)
                      .| .+++++.+.+....       +|+||++||+.+..+.+.+  .+|++||+|+.+|+++|+.||+ ++ |||||+|+|
T Consensus       206 ~~~~~~~~~~~~~m~~~-------gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela-~~~GIRVNaVaP  277 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLAE-------GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLA-AHGGGDARVSVL  277 (405)
T ss_dssp             HHHHHHHHHHHHTCEEE-------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-TTTSCEEEEEEC
T ss_pred             HHHHHHHHHHHHhhhhC-------CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEEEe
Confidence            98 78888775433332       5899999999999998887  9999999999999999999998 99 999999999


Q ss_pred             CccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCc----hhHHH
Q 022335          202 GPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLP----KDAVK  277 (299)
Q Consensus       202 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~----~~~~~  277 (299)
                      |++.|++...-...+........  ++++.++||||++.+.||+|+   ++.|+.+.+|++..+....|..    +....
T Consensus       278 G~i~T~~s~~ip~~p~y~~~l~~--~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d~~e~~~~~q~~~~  352 (405)
T 3zu3_A          278 KAVVSQASSAIPMMPLYLSLLFK--VMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRADYKELDPEVQNQVQ  352 (405)
T ss_dssp             CCCCCHHHHTSTTHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECCHHHHCHHHHHHHH
T ss_pred             CCCcCchhhcCCCCcHHHHHHHH--HHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCchhhcCHHHHHHHH
Confidence            99987643322222222222222  678889999999999999986   6889999999998886666644    33355


Q ss_pred             HHhHhh
Q 022335          278 QLSRTV  283 (299)
Q Consensus       278 ~~~~~~  283 (299)
                      ++|..+
T Consensus       353 ~~~~~~  358 (405)
T 3zu3_A          353 QLWDQV  358 (405)
T ss_dssp             HHHHHC
T ss_pred             HHHHHh
Confidence            556554

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.6e-42  Score=305.80  Aligned_cols=245  Identities=26%  Similarity=0.304  Sum_probs=168.1

Q ss_pred             CCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCCh-----------hHHH-----------HHHHHHHhcCCc--
Q 022335           11 ILKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRK-----------QVLD-----------AAVSALRSLGIK--   64 (299)
Q Consensus        11 ~l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~-----------~~~~-----------~~~~~~~~~~~~--   64 (299)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|++           +.++           ++.+++.+.+..  
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            478999999999  89999999999999999999998753           1121           223333322211  


Q ss_pred             -EEEEEcC--CCC------------------HHHHHHHHHHHHHHcCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHh
Q 022335           65 -AVGFEGD--VRR------------------QEHAKKVVESTFEHFGKLDILVNAAAGNF--LVSAEDLSPNGFRTVMDI  121 (299)
Q Consensus        65 -v~~~~~D--l~~------------------~~~v~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~  121 (299)
                       ..++.+|  +++                  +++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++++++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence             2444444  222                  45899999999999999999999999763  467788999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc-hHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEE
Q 022335          122 DSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-IHVAAAKAAVDAITRNLALEWGAD-YDIRVNGI  199 (299)
Q Consensus       122 n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i  199 (299)
                      |+.++++++++++|+|++         .|+||++||..+..+.+++ ..|++||+|+++|+++++.|++ + +||+||+|
T Consensus       166 N~~g~~~l~~~~~~~m~~---------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v  235 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKE---------GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAG-RARAVRVNCI  235 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEE---------EEEEEEEEECC------------------THHHHHHHHHHHH-HHHCCEEEEE
T ss_pred             hhHHHHHHHHHHHHHHhc---------CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeeEEEE
Confidence            999999999999999954         3899999999999888887 6999999999999999999996 5 79999999


Q ss_pred             eCCccCCCCCCCCCCc-------hHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          200 APGPIGDTPGMNKLAP-------DEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       200 ~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +||+++|++... ...       +...+......|.+++.+|+|+|++++||+++...++||++|.+|||+.+.
T Consensus       236 ~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          236 SAGPLKSRAASA-IGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             EECCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             eeCCccChhhhh-cccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            999998765322 211       011112234468889999999999999999998999999999999998763

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.1e-41  Score=295.99  Aligned_cols=246  Identities=24%  Similarity=0.295  Sum_probs=198.3

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHH-------HHHHHHHhc--CC--c-EEEEEcC-----
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLD-------AAVSALRSL--GI--K-AVGFEGD-----   71 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~-------~~~~~~~~~--~~--~-v~~~~~D-----   71 (299)
                      .|+||++|||||+  +|||+++|++|+++|++|++++|++....       ...+++.+.  +.  + ...+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            4679999999999  99999999999999999999987642110       000111111  11  1 2344443     


Q ss_pred             ---CCC------------HHHHHHHHHHHHHHcCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH
Q 022335           72 ---VRR------------QEHAKKVVESTFEHFGKLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL  134 (299)
Q Consensus        72 ---l~~------------~~~v~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  134 (299)
                         +++            +++++++++++.+.+|++|+||||||+..  ..++.+.+.++|++++++|+.++++++++++
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               332            56899999999999999999999999754  4677788999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCceEEEeccccccccCCCc-hHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCCCC
Q 022335          135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQ-IHVAAAKAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGMNK  212 (299)
Q Consensus       135 ~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~~~  212 (299)
                      |+|++         +|+||++||..+..+.++. ..|++||+|+++|+++++.|++ + +||+||+|+||+++|++....
T Consensus       165 ~~m~~---------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~gi~vn~v~PG~v~T~~~~~~  234 (297)
T 1d7o_A          165 PIMNP---------GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             GGEEE---------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCBCCCSSCC
T ss_pred             HHhcc---------CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhC-cccCcEEEEEeccccccchhhhc
Confidence            99854         3899999999999888887 6999999999999999999996 5 799999999999987654332


Q ss_pred             CCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          213 LAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ...++.........|.+++.+|+|+|++++||+++...+++|+.+.+|||+.+.
T Consensus       235 ~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          235 GFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             SHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             cccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            112333344445678889999999999999999998899999999999998864

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.6e-42  Score=307.88  Aligned_cols=261  Identities=16%  Similarity=0.064  Sum_probs=210.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeCChhHHH------------HHHHHHHhcCCcEEEEEcCCCCHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLD------------AAVSALRSLGIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~Dl~~~~~v~   79 (299)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+.++            .+.+++.+.+.++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            499999999999999999999999 9999999999865433            234666777888999999999999999


Q ss_pred             HHHHHHHHHc-CCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhhH
Q 022335           80 KVVESTFEHF-GKLDILVNAAAGN-------------FLVSA---------------------EDLSPNGFRTVMDIDSV  124 (299)
Q Consensus        80 ~~~~~~~~~~-g~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~  124 (299)
                      ++++++.+.+ |++|+||||||+.             ...++                     .+.+.++|+.++++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999972             22344                     36789999999999999


Q ss_pred             HHH-HHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc--hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeC
Q 022335          125 GTF-TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ--IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAP  201 (299)
Q Consensus       125 ~~~-~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~p  201 (299)
                      +.| .+++++.+.+....       +|+||++||+.+..+.+.+  .+|++||+|+.+|+++|+.||+ ++|||||+|+|
T Consensus       220 ~~~~~~~~a~~~~~m~~~-------gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela-~~GIRVNaVaP  291 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLAD-------GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLA-KHGGGANVAVL  291 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEE-------EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhhC-------CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEEc
Confidence            998 78888776433332       5899999999999888877  9999999999999999999998 89999999999


Q ss_pred             CccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc-CcEEEeCCccccCCCCCCc-h---hHH
Q 022335          202 GPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN-GTTLIVDGGLWLSRPRHLP-K---DAV  276 (299)
Q Consensus       202 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~-G~~i~~dgg~~~~~~~~~~-~---~~~  276 (299)
                      |+++|++. ..++..... ......|+++.++||||++.+.||+|+.- |.+ |+...+|++..+....|.. +   ...
T Consensus       292 G~i~T~~~-~~ip~~~~~-~~~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d~~e~~~~~q~~~  368 (422)
T 3s8m_A          292 KSVVTQAS-AAIPVMPLY-ISMVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLDDWELRDDVQDAC  368 (422)
T ss_dssp             CCCCCTTG-GGSTHHHHH-HHHHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESCTTTTSHHHHHHH
T ss_pred             CCCcChhh-hcCCCChHH-HHHHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccchhhCCHHHHHHH
Confidence            99987654 333322211 11122367889999999999999998754 665 7777799998886666654 3   335


Q ss_pred             HHHhHhhh
Q 022335          277 KQLSRTVE  284 (299)
Q Consensus       277 ~~~~~~~~  284 (299)
                      .++|..++
T Consensus       369 ~~~~~~~~  376 (422)
T 3s8m_A          369 KALWPQVT  376 (422)
T ss_dssp             HHHGGGCC
T ss_pred             HHHHHHhc
Confidence            55565543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-40  Score=284.31  Aligned_cols=248  Identities=21%  Similarity=0.249  Sum_probs=206.3

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ++..|++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+  .++.++.+|++++++++++++++
T Consensus        26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999999998888888887654  56889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc--cc
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY--TA  163 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~--~~  163 (299)
                      .+.++++|+||||||+....++.+.+.++|++.+++|+.+++.+++.+++.|++.+..     .++||++||..+.  .+
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~-----~g~iv~isS~~~~~~~~  180 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD-----DGHIININSMSGHRVLP  180 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-----SCEEEEECCGGGTSCCS
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-----CceEEEEcChhhcccCC
Confidence            9999999999999998877788888999999999999999999999999999986410     2899999999887  56


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      .++...|+++|++++.|+++++.|++ ...||++++|+||+++|+..........  .......+..++.+|+|+|++++
T Consensus       181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~  258 (279)
T 1xg5_A          181 LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVI  258 (279)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHH
Confidence            77889999999999999999999984 1569999999999998764221111111  11112223456789999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCc
Q 022335          243 YLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg  262 (299)
                      +++++...+.+|+....++|
T Consensus       259 ~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          259 YVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHHSCTTEEEEEEEEEETT
T ss_pred             HHhcCCcceEeeeEEEccCC
Confidence            99998878888876555544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=9.1e-41  Score=282.45  Aligned_cols=225  Identities=16%  Similarity=0.204  Sum_probs=187.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |++|||||++|||++++++|+++|++|++++|+++.++.+.+++   +.++.++.+|+++.++++++++++.+   .+|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCE
Confidence            68999999999999999999999999999999998877766655   56788999999999999999887644   3499


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      ||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++.        ++||++||..+..+.++...|++||
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~~iv~isS~~~~~~~~~~~~Y~asK  147 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--------VNVVMIMSTAAQQPKAQESTYCAVK  147 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--------CEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CeEEEEeecccCCCCCCCchhHHHH
Confidence            99999998888888999999999999999999999999999998764        5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC-CCCCCcc
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS-DTGKYVN  253 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~  253 (299)
                      +|++.|+++++.|++ ++||+||+|+||+++|++....          ....+.+++.+|+|+|++++++++ +...+++
T Consensus       148 aa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~it  216 (230)
T 3guy_A          148 WAVKGLIESVRLELK-GKPMKIIAVYPGGMATEFWETS----------GKSLDTSSFMSAEDAALMIHGALANIGNGYVS  216 (230)
T ss_dssp             HHHHHHHHHHHHHTT-TSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEEE
T ss_pred             HHHHHHHHHHHHHHH-hcCeEEEEEECCcccChHHHhc----------CCCCCcccCCCHHHHHHHHHHHHhCcCCCCcc
Confidence            999999999999997 8899999999999987643221          122356788999999999999987 6788999


Q ss_pred             CcEEEeCCccc
Q 022335          254 GTTLIVDGGLW  264 (299)
Q Consensus       254 G~~i~~dgg~~  264 (299)
                      |+.+..+...+
T Consensus       217 g~~~~~~~~~~  227 (230)
T 3guy_A          217 DITVNREGHHH  227 (230)
T ss_dssp             EEEEEC-----
T ss_pred             ceeecCCCCCC
Confidence            99999886543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.1e-40  Score=318.62  Aligned_cols=237  Identities=27%  Similarity=0.314  Sum_probs=191.4

Q ss_pred             CCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC---------ChhHHHHHHHHHHhcCCcEEEEEcCCCCH
Q 022335            5 SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR---------RKQVLDAAVSALRSLGIKAVGFEGDVRRQ   75 (299)
Q Consensus         5 ~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~   75 (299)
                      .+....+|+||++|||||++|||+++|++|+++|++|++++|         +.+.++.+.+++...+..+   .+|+++.
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~   86 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSV   86 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCG
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCH
Confidence            455666899999999999999999999999999999999988         6777888888887766554   3799999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      ++++++++++.+.+|++|+||||||+....++.+.+.++|+.++++|+.|+++++++++|+|++++       .|+||++
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-------~g~IV~i  159 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-------YGRIIMT  159 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-------CEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------CCEEEEE
Confidence            999999999999999999999999998888899999999999999999999999999999999876       7999999


Q ss_pred             ccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHH
Q 022335          156 SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       156 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      ||..+..+.++...|++||+|+.+|+++++.|++ ++||+||+|+||++ +++..... .+...          ...+|+
T Consensus       160 sS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gI~vn~v~Pg~~-t~~~~~~~-~~~~~----------~~~~pe  226 (613)
T 3oml_A          160 SSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA-RNNVLCNVIVPTAA-SRMTEGIL-PDILF----------NELKPK  226 (613)
T ss_dssp             CCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------CCCC-CHHHH----------TTCCGG
T ss_pred             CCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEECCCC-Chhhhhcc-chhhh----------hcCCHH
Confidence            9999999999999999999999999999999997 88999999999986 44433322 22221          235899


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+|.+++||+++. .+++|++|.+|||+..
T Consensus       227 dvA~~v~~L~s~~-~~~tG~~i~vdGG~~~  255 (613)
T 3oml_A          227 LIAPVVAYLCHES-CEDNGSYIESAAGWAT  255 (613)
T ss_dssp             GTHHHHHHTTSTT-CCCCSCEEEEETTEEE
T ss_pred             HHHHHHHHhcCCC-cCCCceEEEECCCeEE
Confidence            9999999999988 8999999999999876

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.7e-39  Score=282.70  Aligned_cols=238  Identities=23%  Similarity=0.242  Sum_probs=201.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.++++.++   .+.++.++.+|+++.++++++++++.+.+++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA---YPDRAEAISLDVTDGERIDVVAADVLARYGR   79 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            3589999999999999999999999999999999999877766543   3567999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|+++.       .++||++||..+..+.++...|+
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~  152 (281)
T 3m1a_A           80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-------SGSVVNISSFGGQLSFAGFSAYS  152 (281)
T ss_dssp             CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTCCCTTCHHHH
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCEEEEEcCccccCCCCCchHHH
Confidence            99999999998778888999999999999999999999999999999876       69999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-------Cc----hHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-------AP----DEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                      +||+|++.++++++.|++ ++||++|+|+||+++|+......       ..    ...........+.+++.+|+|+|++
T Consensus       153 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a  231 (281)
T 3m1a_A          153 ATKAALEQLSEGLADEVA-PFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAA  231 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhh-ccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHH
Confidence            999999999999999997 88999999999999876543211       00    0112234455677888999999999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCcc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ++++++...   .|..+++.++.
T Consensus       232 ~~~~~~~~~---~~~~~~l~s~~  251 (281)
T 3m1a_A          232 IRLALDTEK---TPLRLALGGDA  251 (281)
T ss_dssp             HHHHHHSSS---CCSEEEESHHH
T ss_pred             HHHHHhCCC---CCeEEecCchH
Confidence            999997643   45566665543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.5e-39  Score=274.20  Aligned_cols=226  Identities=24%  Similarity=0.302  Sum_probs=191.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.    ++.++.+|+++.++++++++++.+.++++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            7899999999999999999999999999999999887776655542    688899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||||+....++.+.+.++|++.+++|+.+++++++.+++.|++++       .++||++||..+..+.++...|+++
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~s  153 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-------GGTIVNVGSLAGKNPFKGGAAYNAS  153 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-------CEEEEEECCTTTTSCCTTCHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-------CcEEEEECCchhcCCCCCCchhhHH
Confidence            999999987777788889999999999999999999999999999865       6899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCcc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVN  253 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  253 (299)
                      |++++.++++++.+++ ++||++++|+||+++|++.. ... +.    .       ...+|+|+|+++++++++...+++
T Consensus       154 K~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~~-~~----~-------~~~~~~dvA~~~~~l~~~~~~~~~  219 (234)
T 2ehd_A          154 KFGLLGLAGAAMLDLR-EANVRVVNVLPGSVDTGFAG-NTP-GQ----A-------WKLKPEDVAQAVLFALEMPGHAMV  219 (234)
T ss_dssp             HHHHHHHHHHHHHHHG-GGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSSCC
T ss_pred             HHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCccc-ccc-cc----c-------CCCCHHHHHHHHHHHhCCCccccc
Confidence            9999999999999997 88999999999999865432 111 00    0       146999999999999999889999


Q ss_pred             CcEEEeCCccc
Q 022335          254 GTTLIVDGGLW  264 (299)
Q Consensus       254 G~~i~~dgg~~  264 (299)
                      |+.+..+++..
T Consensus       220 g~~~~~~~~~~  230 (234)
T 2ehd_A          220 SEIELRPTRPT  230 (234)
T ss_dssp             CEEECCC----
T ss_pred             ceEEEeecCCC
Confidence            99877665443

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5e-40  Score=284.03  Aligned_cols=244  Identities=25%  Similarity=0.333  Sum_probs=200.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++.+.  +.++.++.+|++++++++++++++.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999998888877777543  346899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +|++|+||||||+..        .++|++.+++|+.+++.+++.++|.|+++...    ..++||++||..+..+.++..
T Consensus        84 ~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~~  151 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG----EGGIIINMSSLAGLMPVAQQP  151 (267)
T ss_dssp             HSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC----CCEEEEEECCGGGTSCCTTCH
T ss_pred             cCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC----CCCEEEEeCCccccCCCCCCc
Confidence            999999999999752        35688999999999999999999999775311    148999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH--HHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHH-------hHHHHhcCCCCCCCCHHHHHH
Q 022335          169 HVAAAKAAVDAITRNL--ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI-------NSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~l--a~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~dva~  239 (299)
                      .|++||+|++.+++++  +.+++ ++||++|+|+||+++|+... .......       ........+..++.+|+|+|+
T Consensus       152 ~Y~~sK~a~~~~~~~~ala~e~~-~~gi~v~~v~Pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~  229 (267)
T 2gdz_A          152 VYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILE-SIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHH-GGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhc-cCCcEEEEEecCcCcchhhh-ccccccccchhhhHHHHHHHHhccccCCCHHHHHH
Confidence            9999999999999995  68887 88999999999999865422 1111110       011111112234679999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCccccCCCCC
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGGLWLSRPRH  270 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~  270 (299)
                      ++++|+++.  +++|+++.++||.......+
T Consensus       230 ~v~~l~s~~--~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          230 GLITLIEDD--ALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHHHCT--TCSSCEEEEETTTEEEECCC
T ss_pred             HHHHHhcCc--CCCCcEEEecCCCcccccCc
Confidence            999999865  49999999999887654443

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.8e-40  Score=282.65  Aligned_cols=224  Identities=15%  Similarity=0.036  Sum_probs=193.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      +++|++|||||++|||++++++|+++|++|++++|+++..+          ....++.+|++++++++++++++.+.+  
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   74 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   74 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999875422          246778999999999999999999999  


Q ss_pred             CCccEEEEcCCCCCCCCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|+||||||+....++ .+.+.++|++.+++|+.+++.++++++|.|++         +|+||++||..+..+.++..
T Consensus        75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~  145 (241)
T 1dhr_A           75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---------GGLLTLAGAKAALDGTPGMI  145 (241)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---------EEEEEEECCGGGGSCCTTBH
T ss_pred             CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---------CCEEEEECCHHHccCCCCch
Confidence            799999999998777777 78888999999999999999999999999854         48999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGA-DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~-~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      .|++||+|++.|+++++.|++. ++||++|+|+||+++|++......          .....+..+|+|+|+++++++++
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~~~vA~~v~~l~~~  215 (241)
T 1dhr_A          146 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP----------EADFSSWTPLEFLVETFHDWITG  215 (241)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST----------TSCGGGSEEHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc----------chhhccCCCHHHHHHHHHHHhcC
Confidence            9999999999999999999831 579999999999998653211000          01122346899999999999999


Q ss_pred             CCCCccCcEEEeCCccc
Q 022335          248 TGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~  264 (299)
                      ...+++|+.+.+|||..
T Consensus       216 ~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          216 NKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             TTCCCTTCEEEEEEETT
T ss_pred             CCcCccceEEEEeCCCC
Confidence            99999999999999865

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=4.5e-40  Score=281.87  Aligned_cols=226  Identities=20%  Similarity=0.190  Sum_probs=195.2

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .....+|++|||||++|||+++|++|+++|++|++++|+.+..+            -..+.+|+++.++++++++++.+.
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            33455899999999999999999999999999999999875422            235789999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCC-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           89 FGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      ++++|+||||||+....+ +.+.+.++|++.+++|+.++++++++++|.|++         .|+||++||..+..+.++.
T Consensus        85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~  155 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---------GGLFVLTGASAALNRTSGM  155 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---------EEEEEEECCGGGGSCCTTB
T ss_pred             cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---------CCEEEEEechhhccCCCCC
Confidence            999999999999876654 677889999999999999999999999999854         4899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          168 IHVAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ..|++||+|++.|+++++.|++ .++||++|+|+||+++|++          ........+..++.+|+|+|+++++|++
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~----------~~~~~~~~~~~~~~~~~dva~~i~~l~~  225 (251)
T 3orf_A          156 IAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT----------NRKYMSDANFDDWTPLSEVAEKLFEWST  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH----------HHHHCTTSCGGGSBCHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc----------hhhhcccccccccCCHHHHHHHHHHHhc
Confidence            9999999999999999999973 2679999999999997642          2223334456678999999999999999


Q ss_pred             C-CCCCccCcEEEeCCcccc
Q 022335          247 D-TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~-~~~~~~G~~i~~dgg~~~  265 (299)
                      + ...+++|+.+.+++|...
T Consensus       226 ~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          226 NSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             CGGGCCCTTCEEEEEEETTE
T ss_pred             CccccCCcceEEEEecCCcc
Confidence            8 889999999999988654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-40  Score=279.02  Aligned_cols=225  Identities=18%  Similarity=0.107  Sum_probs=192.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      |++|++|||||++|||++++++|+++|++|++++|+++..+          ....++.+|++++++++++++++.+.+  
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            35899999999999999999999999999999999875422          246778999999999999999999999  


Q ss_pred             CCccEEEEcCCCCCCCCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|+||||||+....++ .+.+.++|++.+++|+.++++++++++|.|++         .++||++||..+..+.++..
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~  141 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---------GGLLQLTGAAAAMGPTPSMI  141 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---------EEEEEEECCGGGGSCCTTBH
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---------CCEEEEECchhhccCCCCcH
Confidence            799999999998777777 77888999999999999999999999999854         48999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH-HHcC
Q 022335          169 HVAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL-YLTS  246 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~s  246 (299)
                      .|++||+|++.|+++++.|++ .++||++|+|+||+++|++.....          ......+..+|+|+|++++ +|++
T Consensus       142 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~~~~~~~~~~dvA~~i~~~l~s  211 (236)
T 1ooe_A          142 GYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM----------PNADHSSWTPLSFISEHLLKWTTE  211 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS----------TTCCGGGCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcC----------CCccccccCCHHHHHHHHHHHHcC
Confidence            999999999999999999983 167999999999999765321100          0111234578999999998 5558


Q ss_pred             CCCCCccCcEEEeCCcccc
Q 022335          247 DTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~  265 (299)
                      +...+++|+.+.+|||...
T Consensus       212 ~~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          212 TSSRPSSGALLKITTENGT  230 (236)
T ss_dssp             GGGCCCTTCEEEEEEETTE
T ss_pred             CCcccccccEEEEecCCCc
Confidence            8889999999999998653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-39  Score=273.53  Aligned_cols=231  Identities=16%  Similarity=0.182  Sum_probs=192.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+.++.+.+.   .+.++.++.+|++++++++++++++.+.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            358999999999999999999999999  9999999998876654321   25679999999999999999999999999


Q ss_pred             C--CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC----CCCCCCCceEEEeccccccc
Q 022335           90 G--KLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGP----GRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        90 g--~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~----~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +  ++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++++.|.++..    .......++||++||..+..
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence            8  9999999999887 678888899999999999999999999999999987510    00001148999999998887


Q ss_pred             cC-------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHH
Q 022335          163 AS-------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       163 ~~-------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      +.       +....|++||++++.++++++.+++ ++||++++|+||+++|++...                 ....+|+
T Consensus       158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~  219 (250)
T 1yo6_A          158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGK-----------------NAALTVE  219 (250)
T ss_dssp             TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC------------------------------H
T ss_pred             CCcccccccCCccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEcCCceecCCCCC-----------------CCCCCHH
Confidence            76       5788999999999999999999997 889999999999998654321                 1357899


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      |+|+.+++++++...+++|+++.+|||.
T Consensus       220 ~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          220 QSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            9999999999988888999999999985

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-39  Score=274.03  Aligned_cols=234  Identities=26%  Similarity=0.387  Sum_probs=198.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||++++++|+++|++|++++|+.+            ..++.++.+|++++++++++++++ +.++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~------------~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc------------ccceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            789999999999999999999999999999999864            124588999999999999999999 8889999


Q ss_pred             EEEEcCCCCCCCCCCCCC----HHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           94 ILVNAAAGNFLVSAEDLS----PNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|||||.....++.+.+    .++|++.+++|+.+++++++++.+.|.++.... ....++||++||..+..+.++...
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDA-EGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCT-TSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC-CCCCeEEEEeCChhhccCCCCCch
Confidence            999999987665555544    459999999999999999999999998753110 011359999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  248 (299)
                      |++||++++.++++++.|++ ++||++++|+||+++++... .. .+..........|. +++.+|+|+|+++++++++ 
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-  223 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQ-GL-PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN-  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHH-TS-CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC-
T ss_pred             hhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccCcchhhh-cc-chhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC-
Confidence            99999999999999999997 88999999999999865432 22 23334455566777 8899999999999999987 


Q ss_pred             CCCccCcEEEeCCccccC
Q 022335          249 GKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~  266 (299)
                       .+++|+.+.+|||+.+.
T Consensus       224 -~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 -PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             -TTCCSCEEEESTTCCCC
T ss_pred             -CCCCCcEEEEcCCeecC
Confidence             78999999999999764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-38  Score=282.24  Aligned_cols=189  Identities=25%  Similarity=0.336  Sum_probs=170.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-----KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      |++|++|||||++|||++++++|+++|++|++++|+     .+.++.+.+.+...+.++.++.+|++++++++++++++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            458999999999999999999999999999987765     566777777777777889999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-cCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-ASW  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~~~  165 (299)
                      +.+|++|+||||||+....++.+.+.++|++.+++|+.|+++++++++|+|++++       .|+||++||..+.. +.+
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-------~g~iV~isS~~~~~~~~~  155 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-------HGLLIWISSSSSAGGTPP  155 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCCS
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEEecchhccCCCC
Confidence            9999999999999998888889999999999999999999999999999999876       79999999999884 456


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCC
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP  208 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~  208 (299)
                      +...|++||+|+++|+++++.|++ ++||+|++|+||++.|+.
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~el~-~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          156 YLAPYFAAKAAMDAIAVQYARELS-RWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCC----
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEECCccccCc
Confidence            788999999999999999999997 889999999999997543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=3.5e-39  Score=276.69  Aligned_cols=232  Identities=21%  Similarity=0.215  Sum_probs=189.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCH-HHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQ-EHAKKVVESTFE   87 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~-~~v~~~~~~~~~   87 (299)
                      |++|++|||||++|||++++++|+++|++ |++++|+.+.  ...+++.+.  +.++.++.+|++++ ++++++++++.+
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            56999999999999999999999999997 9999998632  222333332  45789999999998 999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .++++|+||||||+.        +.++|++.+++|+.++++++++++|.|.++...    ..|+||++||..+..+.++.
T Consensus        81 ~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~----~~g~iv~isS~~~~~~~~~~  148 (254)
T 1sby_A           81 QLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGG----PGGIIANICSVTGFNAIHQV  148 (254)
T ss_dssp             HHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTC----CCEEEEEECCGGGTSCCTTS
T ss_pred             hcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCC----CCCEEEEECchhhccCCCCc
Confidence            999999999999974        346689999999999999999999999765311    14899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC---chHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---PDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ..|++||+|++.|+++++.++. ++||++|+|+||+++|++......   ............|   +.+|+|+|++++++
T Consensus       149 ~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~~~  224 (254)
T 1sby_A          149 PVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFVKA  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHHHH
Confidence            9999999999999999999986 679999999999998764322110   0111122222333   35899999999999


Q ss_pred             cCCCCCCccCcEEEeCCccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~  264 (299)
                      ++   .+.+|+.+.+|||+.
T Consensus       225 ~~---~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          225 IE---ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             HH---HCCTTCEEEEETTEE
T ss_pred             HH---cCCCCCEEEEeCCce
Confidence            85   568999999999964

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-38  Score=274.67  Aligned_cols=224  Identities=18%  Similarity=0.215  Sum_probs=197.0

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      |.+...+++|++|||||++|||++++++|+++|++|++++|+.+.++.+.+++...+.++.++.+|++++++++++++++
T Consensus        23 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~  102 (272)
T 1yb1_A           23 PKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV  102 (272)
T ss_dssp             --CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence            33445688999999999999999999999999999999999999888888888877778999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++       .++||++||..+..+.+
T Consensus       103 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~  175 (272)
T 1yb1_A          103 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-------HGHIVTVASAAGHVSVP  175 (272)
T ss_dssp             HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCCC-CCCHH
T ss_pred             HHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------CCEEEEEechhhcCCCC
Confidence            99999999999999988777777888899999999999999999999999999876       68999999999998888


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGA--DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      +...|++||++++.++++++.|+..  +.||++++|+||+++|++...     ..       .+..++.+|+|+|+.+++
T Consensus       176 ~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----~~-------~~~~~~~~~~dva~~i~~  243 (272)
T 1yb1_A          176 FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----PS-------TSLGPTLEPEEVVNRLMH  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----TH-------HHHCCCCCHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----cc-------ccccCCCCHHHHHHHHHH
Confidence            8999999999999999999999841  459999999999998765321     00       123467899999999999


Q ss_pred             HcCCC
Q 022335          244 LTSDT  248 (299)
Q Consensus       244 l~s~~  248 (299)
                      ++...
T Consensus       244 ~~~~~  248 (272)
T 1yb1_A          244 GILTE  248 (272)
T ss_dssp             HHHTT
T ss_pred             HHHcC
Confidence            98654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-38  Score=272.74  Aligned_cols=239  Identities=18%  Similarity=0.140  Sum_probs=199.9

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcC---CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHG---ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      +.....+++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++...+.++.++.+|+++.+++++++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHH
Confidence            344456889999999999999999999999999   9999999998766544 444444668999999999999999999


Q ss_pred             HHHHHHcC--CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC----CCCCCCceEEEe
Q 022335           83 ESTFEHFG--KLDILVNAAAGNF-LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPG----RSSAGGGSILNI  155 (299)
Q Consensus        83 ~~~~~~~g--~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~----~~~~~~g~iv~v  155 (299)
                      +++.+.++  ++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++++.|.++...    ......++||++
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            99999998  8999999999877 5677888999999999999999999999999999876100    000113799999


Q ss_pred             ccccccccCC---CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCC
Q 022335          156 SATLHYTASW---YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG  232 (299)
Q Consensus       156 sS~~~~~~~~---~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
                      ||..+..+.+   ....|++||++++.|+++++.+++ ++||++++|+||+++|++...                 ....
T Consensus       172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~  233 (267)
T 1sny_A          172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGS-----------------SAPL  233 (267)
T ss_dssp             CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCT-----------------TCSB
T ss_pred             ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEeCCcceecCCCCC-----------------CCCC
Confidence            9998877653   678899999999999999999997 889999999999998764321                 1357


Q ss_pred             CHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          233 EKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       233 ~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +|+++|+.++++++.....++|+.+.+||+.
T Consensus       234 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          234 DVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             CHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             CHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            8999999999999888888999999999986

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=3.7e-39  Score=292.22  Aligned_cols=259  Identities=16%  Similarity=0.093  Sum_probs=207.6

Q ss_pred             CCCCEEEEecCCChHHHH--HHHHHHHcCCeEEEEeCChhH------------HHHHHHHHHhcCCcEEEEEcCCCCHHH
Q 022335           12 LKGKVALITGGGSGIGFE--ISTQFGKHGASVAIMGRRKQV------------LDAAVSALRSLGIKAVGFEGDVRRQEH   77 (299)
Q Consensus        12 l~~k~vlItGas~giG~a--ia~~la~~G~~Vv~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~Dl~~~~~   77 (299)
                      ..||++|||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+...+.++.++.+|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            579999999999999999  999999999999999997543            345555566667789999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhh
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAGN-------------FLVSA---------------------EDLSPNGFRTVMDIDS  123 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~  123 (299)
                      ++++++++.+.+|++|+||||||..             ...++                     .+.+.++|+.++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974             22333                     3568999999999999


Q ss_pred             HHHH-HHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc--hHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEE
Q 022335          124 VGTF-TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ--IHVAAAKAAVDAITRNLALEWGAD-YDIRVNGI  199 (299)
Q Consensus       124 ~~~~-~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i  199 (299)
                      .+.+ .+++.+.+.+....       +|+||++||..+..+.+.+  .+|++||+|+.+|+++|+.|++ + +|||||+|
T Consensus       218 ~~~~~~~~~~l~~~~~~~~-------gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa-~~~GIrVN~V  289 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSD-------KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLN-RVIGGRAFVS  289 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEE-------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-HHHSCEEEEE
T ss_pred             HHHHHHHHHHHHHHhhhcC-------CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEEE
Confidence            9988 77787776544333       6899999999999999888  9999999999999999999998 8 89999999


Q ss_pred             eCCccCCCCCCCCCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCC-chhH--
Q 022335          200 APGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHL-PKDA--  275 (299)
Q Consensus       200 ~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~-~~~~--  275 (299)
                      +||+++|+... .++. +.......  .++++.+++|++++.+.+|+++  ...+|+.+.+|+|..+....|. .+..  
T Consensus       290 ~PG~v~T~~s~-~ip~~p~y~~~~~--~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~e~~~~~q~  364 (418)
T 4eue_A          290 VNKALVTKASA-YIPTFPLYAAILY--KVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDLELRKDVQD  364 (418)
T ss_dssp             ECCCCCCHHHH-TSTTHHHHHHHHH--HHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTTTTCHHHHH
T ss_pred             ECCcCcChhhh-cCCCCcHHHHHHH--HHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChhhcCHHHHH
Confidence            99999876432 2222 11111111  1455678999999999999986  5678999999987777655554 4444  


Q ss_pred             -HHHHhHhh
Q 022335          276 -VKQLSRTV  283 (299)
Q Consensus       276 -~~~~~~~~  283 (299)
                       ..++|..+
T Consensus       365 ~~~~~~~~~  373 (418)
T 4eue_A          365 EVDRIWSNI  373 (418)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHHh
Confidence             44445443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=8.7e-38  Score=275.16  Aligned_cols=228  Identities=23%  Similarity=0.237  Sum_probs=187.6

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCH-HHH
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQ-EHA   78 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~-~~v   78 (299)
                      |....|+  ..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|+++. +++
T Consensus         1 m~~~~~~--~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v   78 (311)
T 3o26_A            1 MPETCPN--TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATM   78 (311)
T ss_dssp             -------------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHH
T ss_pred             CCCCCCC--ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHH
Confidence            4444333  46789999999999999999999999999999999999999999999997764 4799999999998 999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCC------------------------------CCCCCCCHHHHHHHHHhhhHHHHH
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFL------------------------------VSAEDLSPNGFRTVMDIDSVGTFT  128 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~  128 (299)
                      +++++.+.+.++++|+||||||+...                              .++.+.+.++|++++++|+.|+++
T Consensus        79 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  158 (311)
T 3o26_A           79 SSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKS  158 (311)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHH
Confidence            99999999999999999999998632                              245567889999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-------------------------------------------C
Q 022335          129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-------------------------------------------W  165 (299)
Q Consensus       129 l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-------------------------------------------~  165 (299)
                      ++++++|+|+++.       .++||++||..+..+.                                           +
T Consensus       159 l~~~~~~~l~~~~-------~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (311)
T 3o26_A          159 VTEVLIPLLQLSD-------SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPS  231 (311)
T ss_dssp             HHHHHHHHHTTSS-------SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCS
T ss_pred             HHHHhhHhhccCC-------CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcc
Confidence            9999999998765       6899999999887653                                           3


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      +...|++||+|++.|+++++.++.   +|+||+|+||+|+|++....                 ...++++.++.+++++
T Consensus       232 ~~~~Y~~SK~a~~~~~~~la~e~~---~i~v~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~~~  291 (311)
T 3o26_A          232 FGAAYTTSKACLNAYTRVLANKIP---KFQVNCVCPGLVKTEMNYGI-----------------GNYTAEEGAEHVVRIA  291 (311)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHCT---TSEEEEECCCSBCSGGGTTC-----------------CSBCHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHhhcC---CceEEEecCCceecCCcCCC-----------------CCCCHHHHHHHHHHHH
Confidence            568899999999999999999985   49999999999986543211                 1258999999999988


Q ss_pred             CCCCCCccCcEE
Q 022335          246 SDTGKYVNGTTL  257 (299)
Q Consensus       246 s~~~~~~~G~~i  257 (299)
                      .......+|..+
T Consensus       292 ~~~~~~~~g~~~  303 (311)
T 3o26_A          292 LFPDDGPSGFFY  303 (311)
T ss_dssp             TCCSSCCCSCEE
T ss_pred             hCCCCCCCceEe
Confidence            655544455444

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3.3e-39  Score=277.14  Aligned_cols=219  Identities=22%  Similarity=0.281  Sum_probs=174.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |++|||||++|||++++++|+++|++|++++|+++.++.            . +.+|+++.++++++++++   ++++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---CCCCCE
Confidence            689999999999999999999999999999998754221            1 678999999998887632   389999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-------------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-------------  161 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-------------  161 (299)
                      ||||||+....       +.|++.+++|+.++++++++++|.|+++.       .++||++||..+.             
T Consensus        66 lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~~~~~~  131 (257)
T 1fjh_A           66 LVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGH-------QPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             EEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-------SCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             EEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-------CcEEEEECChhhhccccccchhhhhh
Confidence            99999976411       22889999999999999999999998865       6899999999887             


Q ss_pred             ---------------ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh--
Q 022335          162 ---------------TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD--  224 (299)
Q Consensus       162 ---------------~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--  224 (299)
                                     .+.+....|++||+|++.++++++.+++ ++||++|+|+||+++|+........ ........  
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~  209 (257)
T 1fjh_A          132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQD-PRYGESIAKF  209 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC----------------------C
T ss_pred             cccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCccchhhccc-hhHHHHHHhc
Confidence                           4455778999999999999999999997 8899999999999987654322111 11111122  


Q ss_pred             cCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       225 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..|.+++.+|+|+|+++++++++...+++|+.+.+|||+.+
T Consensus       210 ~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          210 VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             ccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            45777899999999999999998888999999999999865

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.2e-38  Score=283.07  Aligned_cols=236  Identities=19%  Similarity=0.207  Sum_probs=186.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh------cCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS------LGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~------~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ++|++|||||++|||++++++|+++|++|++++|+...++...+.+..      .+.++.++.+|+++.++++++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            378999999999999999999999999998888765443333333322      2357999999999999999999988 


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY  166 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~  166 (299)
                       .++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+++.       .++||++||..+..+.+.
T Consensus        80 -~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-------~g~IV~isS~~~~~~~~~  151 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-------SGRVLVTGSVGGLMGLPF  151 (327)
T ss_dssp             -TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEEEEGGGTSCCTT
T ss_pred             -hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-------CCEEEEECCcccccCCCC
Confidence             358999999999987777788889999999999999999999999999998876       699999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch---------HHhH---HHHh--cCCCCCC-
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD---------EINS---KARD--YMPLYKL-  231 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~---------~~~~---~~~~--~~~~~~~-  231 (299)
                      ...|++||+|++.|+++++.|++ ++||+||+|+||+|+|++........         ....   ....  ..+.++. 
T Consensus       152 ~~~Y~aSK~a~~~~~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (327)
T 1jtv_A          152 NDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAA  230 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcC
Confidence            99999999999999999999997 88999999999999876543321111         1000   0000  0112233 


Q ss_pred             CCHHHHHHHHHHHcCC---CCCCccCcEEE
Q 022335          232 GEKWDIAMAALYLTSD---TGKYVNGTTLI  258 (299)
Q Consensus       232 ~~~~dva~~~~~l~s~---~~~~~~G~~i~  258 (299)
                      .+|+|+|++++++++.   ..++++|+.+.
T Consensus       231 ~~pedvA~~i~~l~~~~~~~~~~~tg~~~~  260 (327)
T 1jtv_A          231 QNPEEVAEVFLTALRAPKPTLRYFTTERFL  260 (327)
T ss_dssp             BCHHHHHHHHHHHHHCSSCCSEEESCSTTH
T ss_pred             CCHHHHHHHHHHHHcCCCCCeEEEeCchHH
Confidence            5899999999999864   34577776543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.6e-38  Score=269.86  Aligned_cols=216  Identities=21%  Similarity=0.236  Sum_probs=158.9

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |+||++|||||++|||++++++|++ |++|++++|+.+.++.+.+     ..++.++.+|+++.++ .+.+.+..+.+++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~   75 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLDH   75 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCSC
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcCC
Confidence            5699999999999999999999988 9999999999887666543     2458899999998877 5555556667899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++.        +|+||++||..+..+.++...|+
T Consensus        76 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~  147 (245)
T 3e9n_A           76 VDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--------SGCVIYINSGAGNGPHPGNTIYA  147 (245)
T ss_dssp             CSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEEC----------CHHHH
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--------CCeEEEEcCcccccCCCCchHHH
Confidence            9999999999888888888999999999999999999999999999876        38999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      +||+|++.|+++++.|++ ++||++|+|+||+++|++..... .     ......+..++.+|+|+|++++++++...
T Consensus       148 asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~-~-----~~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          148 ASKHALRGLADAFRKEEA-NNGIRVSTVSPGPTNTPMLQGLM-D-----SQGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCccCchhhhhh-h-----hhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence            999999999999999997 88999999999999876433221 1     11122355667899999999999997654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=3.3e-37  Score=266.71  Aligned_cols=221  Identities=23%  Similarity=0.296  Sum_probs=190.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++|++|||||++|||++++++|++ +|++|++++|+.+.++...+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            589999999999999999999999 9999999999999888888888877778999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCCC-HHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC------
Q 022335           92 LDILVNAAAGNFLVSAEDLS-PNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS------  164 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~------  164 (299)
                      +|+||||||+..... .+.+ .++++..+++|+.+++++++++++.|++         .++||++||..+..+.      
T Consensus        83 id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           83 LDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---------QGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             EEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEECCHHHHHHHHTSCHH
T ss_pred             CCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---------CCEEEEECChhhhcccccCChh
Confidence            999999999765433 2334 5889999999999999999999998754         3799999998776320      


Q ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEeCCccC
Q 022335          165 -----------------------------------WYQIHVAAAKAAVDAITRNLALEWGAD----YDIRVNGIAPGPIG  205 (299)
Q Consensus       165 -----------------------------------~~~~~Y~~sKaal~~l~~~la~e~~~~----~gi~v~~i~pG~v~  205 (299)
                                                         .....|++||++++.|++.++.+++ .    +||++++|+||+++
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~~~i~v~~v~PG~v~  231 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLS-EQRKGDKILLNACCPGWVR  231 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHH-HHCTTSCCEEEEEECCSBC
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhh-cccCCCceEEEEecCCccc
Confidence                                               1137899999999999999999996 5    69999999999998


Q ss_pred             CCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC--CCCccCcEEEeCCc
Q 022335          206 DTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT--GKYVNGTTLIVDGG  262 (299)
Q Consensus       206 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgg  262 (299)
                      |++...                 .++.+|+|+|+++++|++..  ..+++|++|. +++
T Consensus       232 t~~~~~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          232 TDMAGP-----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             STTTCT-----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             cCcCCc-----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            764321                 24679999999999999854  4689999987 554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=2.9e-36  Score=262.96  Aligned_cols=221  Identities=23%  Similarity=0.299  Sum_probs=189.1

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +....++||++|||||++|||++++++|+++|++|++++|+.+.++.+.+++.+.+. ++.++.+|+++.++++++++++
T Consensus        21 ~~~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~  100 (286)
T 1xu9_A           21 FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA  100 (286)
T ss_dssp             CCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence            334468899999999999999999999999999999999999999888888876654 7899999999999999999999


Q ss_pred             HHHcCCccEEEEc-CCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           86 FEHFGKLDILVNA-AAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        86 ~~~~g~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      .+.+|++|+|||| +|+. ..++.+.+.++|++.+++|+.+++.++++++|.|++.        .++||++||..+..+.
T Consensus       101 ~~~~g~iD~li~naag~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--------~g~iv~isS~~~~~~~  171 (286)
T 1xu9_A          101 GKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--------NGSIVVVSSLAGKVAY  171 (286)
T ss_dssp             HHHHTSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEEEEGGGTSCC
T ss_pred             HHHcCCCCEEEECCccCC-CCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--------CCEEEEECCcccccCC
Confidence            9999999999999 5654 3455567899999999999999999999999999765        4899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEW--GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~--~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      ++...|++||++++.++++++.|+  . ..||++++|+||+++|+........          .......+|+|+|+.++
T Consensus       172 ~~~~~Y~asK~a~~~~~~~l~~e~~~~-~~~i~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~vA~~i~  240 (286)
T 1xu9_A          172 PMVAAYSASKFALDGFFSSIRKEYSVS-RVNVSITLCVLGLIDTETAMKAVSG----------IVHMQAAPKEECALEII  240 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEECCBCCHHHHHHSCG----------GGGGGCBCHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEeecCccCChhHHHhccc----------cccCCCCCHHHHHHHHH
Confidence            999999999999999999999999  4 6799999999999986532111100          00123578999999999


Q ss_pred             HHcCC
Q 022335          243 YLTSD  247 (299)
Q Consensus       243 ~l~s~  247 (299)
                      ..+..
T Consensus       241 ~~~~~  245 (286)
T 1xu9_A          241 KGGAL  245 (286)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            88754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=7.5e-36  Score=305.39  Aligned_cols=242  Identities=18%  Similarity=0.217  Sum_probs=200.2

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSG-IGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRS----LGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        11 ~l~~k~vlItGas~g-iG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .|+||++|||||++| ||+++|+.|+++|++|+++ +|+.+.++...+++..    .+.++.++.||+++.+++++++++
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            578999999999998 9999999999999999998 6777777777666632    256799999999999999999999


Q ss_pred             HHHH-----cC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHHH--HHHHHhcCCCCCCCCCceEE
Q 022335           85 TFEH-----FG-KLDILVNAAAGNFLV-SAEDLS--PNGFRTVMDIDSVGTFTMCHEA--LKYLKKGGPGRSSAGGGSIL  153 (299)
Q Consensus        85 ~~~~-----~g-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~~~~~~~~~~g~iv  153 (299)
                      +.+.     +| ++|+||||||+.... ++.+.+  .++|+++|++|+.+++.+++.+  +|.|.+++       .|+||
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-------~G~IV  824 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-------AQVIL  824 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-------EEEEE
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-------CCEEE
Confidence            9998     66 999999999988776 788888  8999999999999999999988  56665543       58999


Q ss_pred             EeccccccccCCCchHHHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCC
Q 022335          154 NISATLHYTASWYQIHVAAAKAAVDAI-TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG  232 (299)
Q Consensus       154 ~vsS~~~~~~~~~~~~Y~~sKaal~~l-~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
                      ++||..+..+  +...|++||+|+++| ++.++.+++ ++ |+||+|+||+++++.+....  + .........+. +..
T Consensus       825 nISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela-~~-IrVNaV~PG~V~tT~m~~~~--~-~~~~~~~~~pl-r~~  896 (1887)
T 2uv8_A          825 PMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSAN--N-IIAEGIEKMGV-RTF  896 (1887)
T ss_dssp             EECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCT-TT-EEEEEEEECCEECC-----C--C-TTHHHHHTTSC-CCE
T ss_pred             EEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhC-CC-eEEEEEEecccccccccccc--h-hHHHHHHhcCC-CCC
Confidence            9999998877  678999999999999 999999996 66 99999999999843332211  1 11122233454 566


Q ss_pred             CHHHHHHHHHHHcCCC-CCCccCcEEEeC--CccccCC
Q 022335          233 EKWDIAMAALYLTSDT-GKYVNGTTLIVD--GGLWLSR  267 (299)
Q Consensus       233 ~~~dva~~~~~l~s~~-~~~~~G~~i~~d--gg~~~~~  267 (299)
                      +|+|+|.+++||+++. ..+++|+.+.+|  ||+....
T Consensus       897 sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          897 SQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             EHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             CHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence            9999999999999987 689999999874  9987643

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-36  Score=300.95  Aligned_cols=242  Identities=18%  Similarity=0.215  Sum_probs=200.2

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSG-IGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        11 ~l~~k~vlItGas~g-iG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .|+||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+.    +.++.++.+|+++.+++++++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            478999999999998 9999999999999999998 67776666666666322    45789999999999999999999


Q ss_pred             HHHH-----cC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHHH--HHHHHhcCCCCCCCCCceEE
Q 022335           85 TFEH-----FG-KLDILVNAAAGNFLV-SAEDLS--PNGFRTVMDIDSVGTFTMCHEA--LKYLKKGGPGRSSAGGGSIL  153 (299)
Q Consensus        85 ~~~~-----~g-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~m~~~~~~~~~~~~g~iv  153 (299)
                      +.+.     +| ++|+||||||+.... ++.+.+  .++|++++++|+.+++.+++++  +|.|++++       .|+||
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-------gGrIV  625 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-------AQVIL  625 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-------EEECC
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-------CCEEE
Confidence            9998     77 999999999987776 788888  8999999999999999999998  77776654       58999


Q ss_pred             EeccccccccCCCchHHHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCC
Q 022335          154 NISATLHYTASWYQIHVAAAKAAVDAI-TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG  232 (299)
Q Consensus       154 ~vsS~~~~~~~~~~~~Y~~sKaal~~l-~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
                      ++||..+..+  +...|++||+|+++| ++.++.+++ ++ |+||+|+||+++++.+....   +.........+. +..
T Consensus       626 nISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla-~~-IRVNaVaPG~V~TT~M~~~~---e~~~~~l~~ipl-R~~  697 (1688)
T 2pff_A          626 PMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSAN---NIIAEGIEKMGV-RTF  697 (1688)
T ss_dssp             CCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCT-TT-EECCCCCCCCCCCCSSSCTT---TTCSTTTSSSSC-CCC
T ss_pred             EEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEECcCcCCcccCCc---hHHHHHHHhCCC-CCC
Confidence            9999998877  678999999999999 788888886 65 99999999999844332211   111111222343 456


Q ss_pred             CHHHHHHHHHHHcCCC-CCCccCcEEEeC--CccccCC
Q 022335          233 EKWDIAMAALYLTSDT-GKYVNGTTLIVD--GGLWLSR  267 (299)
Q Consensus       233 ~~~dva~~~~~l~s~~-~~~~~G~~i~~d--gg~~~~~  267 (299)
                      +|+|+|++++||+++. ..+++|+.+.+|  ||+....
T Consensus       698 sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          698 SQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             CCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             CHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence            9999999999999987 688999999875  9987644

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=2e-34  Score=294.26  Aligned_cols=240  Identities=18%  Similarity=0.218  Sum_probs=198.5

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHH----hcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSG-IGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALR----SLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        11 ~l~~k~vlItGas~g-iG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .|+||++|||||++| ||+++|++|+++|++|++++ |+.+.++...+++.    ..+.++.++.||+++.+++++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            478999999999999 99999999999999999985 66666666655552    2256899999999999999999999


Q ss_pred             HHHH---cC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHH--HHHHHHhcCCCCCCCCCceEEEe
Q 022335           85 TFEH---FG-KLDILVNAAAGNFLV-SAEDLS--PNGFRTVMDIDSVGTFTMCHE--ALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        85 ~~~~---~g-~id~lv~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      +.+.   +| ++|+||||||+.... ++.+.+  .++|+.+|++|+.+++.+++.  +++.|.+++       .|+||++
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-------~G~IVnI  801 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-------AQVILPL  801 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-------EEECCEE
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-------CCEEEEE
Confidence            9998   89 999999999988776 888888  899999999999999999987  667776543       5899999


Q ss_pred             ccccccccCCCchHHHHHHHHHHHHHHHHHHH-hcCCCCeEEEEEeCCccC-CCCCCCCCCchHHhHHHHhcCCCCCCCC
Q 022335          156 SATLHYTASWYQIHVAAAKAAVDAITRNLALE-WGADYDIRVNGIAPGPIG-DTPGMNKLAPDEINSKARDYMPLYKLGE  233 (299)
Q Consensus       156 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e-~~~~~gi~v~~i~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (299)
                      ||..+..+  +...|++||+|+++|++.++.+ ++ ++ |+||+|+||+++ |++...    .+.........+. +..+
T Consensus       802 SS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla-~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-r~~s  872 (1878)
T 2uv9_A          802 SPNHGTFG--NDGLYSESKLALETLFNRWYSESWG-NY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-RTFS  872 (1878)
T ss_dssp             CSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTT-TT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC-CCBC
T ss_pred             cchhhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEecceecCccccc----chhhHHHHHhcCC-CCCC
Confidence            99998877  4778999999999999876654 75 55 999999999998 654321    1222223334454 4569


Q ss_pred             HHHHHHHHHHHcCCCC-CCccCcEEEe--CCccccC
Q 022335          234 KWDIAMAALYLTSDTG-KYVNGTTLIV--DGGLWLS  266 (299)
Q Consensus       234 ~~dva~~~~~l~s~~~-~~~~G~~i~~--dgg~~~~  266 (299)
                      |+|+|.+++||+++.. .+++|+.+.+  |||+...
T Consensus       873 PeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          873 QQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            9999999999999876 8999999986  5998764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1.1e-33  Score=234.00  Aligned_cols=198  Identities=19%  Similarity=0.233  Sum_probs=173.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+++||++++++|+ +|++|++++|+.+                 ++.+|++++++++++++++    +++|+|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            79999999999999999999 9999999999864                 4789999999999988764    789999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHHH
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA  175 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKa  175 (299)
                      |||||.....++.+.+.++|++.+++|+.+++++++++.+.|.+         +++||++||..+..+.+....|+++|+
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~Y~~sK~  133 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---------KGSFTLTTGIMMEDPIVQGASAAMANG  133 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---------EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---------CCEEEEEcchhhcCCCCccHHHHHHHH
Confidence            99999877677788899999999999999999999999998743         479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCc
Q 022335          176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGT  255 (299)
Q Consensus       176 al~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  255 (299)
                      +++.+++.++.++  ++||++++|+||++.+++.           ...+..+...+.+++|+|++++++++   .+++|+
T Consensus       134 ~~~~~~~~~~~e~--~~gi~v~~v~pg~v~~~~~-----------~~~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~  197 (202)
T 3d7l_A          134 AVTAFAKSAAIEM--PRGIRINTVSPNVLEESWD-----------KLEPFFEGFLPVPAAKVARAFEKSVF---GAQTGE  197 (202)
T ss_dssp             HHHHHHHHHTTSC--STTCEEEEEEECCBGGGHH-----------HHGGGSTTCCCBCHHHHHHHHHHHHH---SCCCSC
T ss_pred             HHHHHHHHHHHHc--cCCeEEEEEecCccCCchh-----------hhhhhccccCCCCHHHHHHHHHHhhh---ccccCc
Confidence            9999999999987  4599999999999976421           12233456678999999999988873   568999


Q ss_pred             EEEeC
Q 022335          256 TLIVD  260 (299)
Q Consensus       256 ~i~~d  260 (299)
                      .+++|
T Consensus       198 ~~~vd  202 (202)
T 3d7l_A          198 SYQVY  202 (202)
T ss_dssp             EEEEC
T ss_pred             eEecC
Confidence            99886

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=4.2e-33  Score=231.23  Aligned_cols=200  Identities=18%  Similarity=0.108  Sum_probs=170.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |++|||||++|||++++++|+++  +|++++|+++.++.+.+++..     .++.+|+++++++++++++    ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            57999999999999999999998  999999999887777666531     7889999999999999886    789999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      ||||||.....++.+.+.++|++.+++|+.+++++++++    .+.+       .++||++||..+..+.++...|+++|
T Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK  138 (207)
T 2yut_A           70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-------GARAVFFGAYPRYVQVPGFAAYAAAK  138 (207)
T ss_dssp             EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-------EEEEEEECCCHHHHSSTTBHHHHHHH
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-------CcEEEEEcChhhccCCCCcchHHHHH
Confidence            999999887778888899999999999999999999988    2222       58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      ++++.+++.++.+++ ++||++++|+||++.++...            ....+.+++.+|+|+|++++++++...
T Consensus       139 ~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~t~~~~------------~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          139 GALEAYLEAARKELL-REGVHLVLVRLPAVATGLWA------------PLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHHHHH-TTTCEEEEECCCCBCSGGGG------------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHHHHHh-hhCCEEEEEecCcccCCCcc------------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999997 88999999999999765311            112355778999999999999997554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=6.2e-34  Score=243.45  Aligned_cols=220  Identities=22%  Similarity=0.309  Sum_probs=178.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |++|||||+|+||++++++|+++|++|++++|+.+.++.             .+.+|+++.++++++++++   .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            589999999999999999999999999999998753211             1678999999998888754   379999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----------  164 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  164 (299)
                      ||||||....       .++++..+++|+.+++++++++.+.|++..       .++||++||..+..+.          
T Consensus        66 vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~~~~~~  131 (255)
T 2dkn_A           66 LVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQ-------QPAAVIVGSIAATQPGAAELPMVEAM  131 (255)
T ss_dssp             EEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-------SCEEEEECCGGGGSTTGGGCHHHHHH
T ss_pred             EEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-------CceEEEEeccccccccccccchhhhh
Confidence            9999997542       123788999999999999999999998765       5899999999887654          


Q ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC--
Q 022335          165 ----------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM--  226 (299)
Q Consensus       165 ----------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--  226 (299)
                                      +....|++||++++.+++.++.++. ++||++++|+||++.++........ ..........  
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~~  209 (255)
T 2dkn_A          132 LAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA-GRGVRLNVVAPGAVETPLLQASKAD-PRYGESTRRFVA  209 (255)
T ss_dssp             HHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECCBCSHHHHHHHHC-TTTHHHHHSCCC
T ss_pred             cccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEcCCcccchhhhhcccc-hhhHHHHHHHHH
Confidence                            4677899999999999999999996 7899999999999976532111000 0111122222  


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          227 PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       227 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +.+++.+++|+|+++++++++...+++|+.++++||..+.
T Consensus       210 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          210 PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            6778899999999999999887778999999999998764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=5.8e-32  Score=253.50  Aligned_cols=219  Identities=14%  Similarity=0.086  Sum_probs=181.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEE-eCC-------------hhHHHHHHHHHHhcCCcEEEEEcCCCCHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGAS-VAIM-GRR-------------KQVLDAAVSALRSLGIKAVGFEGDVRRQE   76 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~-~r~-------------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   76 (299)
                      -.++++|||||++|||++++++|+++|++ |+++ +|+             .+.++++.+++...+.++.++.||++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            35899999999999999999999999998 6677 888             35567788888888889999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEec
Q 022335           77 HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS  156 (299)
Q Consensus        77 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vs  156 (299)
                      +++++++++. .++++|+||||||+.....+.+.+.++|+.++++|+.|++++.+++.+.|++++.      .++||++|
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~------~~~iV~~S  401 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR------PPVLVLFS  401 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C------CCEEEEEE
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC------CCEEEEEC
Confidence            9999999998 7899999999999988889999999999999999999999999999999876531      37999999


Q ss_pred             cccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHH
Q 022335          157 ATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       157 S~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                      |..+..+.+++..|+++|+++++|+    .++. .+||++++|+||++++++...    ......+.. .. ....+|++
T Consensus       402 S~a~~~g~~g~~~YaaaKa~l~~lA----~~~~-~~gi~v~sI~pG~~~tgm~~~----~~~~~~~~~-~g-~~~l~pee  470 (525)
T 3qp9_A          402 SVAAIWGGAGQGAYAAGTAFLDALA----GQHR-ADGPTVTSVAWSPWEGSRVTE----GATGERLRR-LG-LRPLAPAT  470 (525)
T ss_dssp             EGGGTTCCTTCHHHHHHHHHHHHHH----TSCC-SSCCEEEEEEECCBTTSGGGS----SHHHHHHHH-TT-BCCBCHHH
T ss_pred             CHHHcCCCCCCHHHHHHHHHHHHHH----HHHH-hCCCCEEEEECCccccccccc----hhhHHHHHh-cC-CCCCCHHH
Confidence            9999999999999999999999874    5665 779999999999996554321    111121211 11 24579999


Q ss_pred             HHHHHHHHcCCC
Q 022335          237 IAMAALYLTSDT  248 (299)
Q Consensus       237 va~~~~~l~s~~  248 (299)
                      +++.+.++++..
T Consensus       471 ~a~~l~~~l~~~  482 (525)
T 3qp9_A          471 ALTALDTALGHG  482 (525)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCC
Confidence            999999998654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=4.5e-31  Score=281.72  Aligned_cols=244  Identities=17%  Similarity=0.077  Sum_probs=184.2

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSG-IGFEISTQFGKHGASVAIMGRRKQV-----LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        11 ~l~~k~vlItGas~g-iG~aia~~la~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .|+||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+.++..+.+|+++.+++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            478999999999999 9999999999999999999998766     5666666655567899999999999999999999


Q ss_pred             HHH----HcCCccEEEEcCCCC----CC-CCCCCCCHHH----HHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCce
Q 022335           85 TFE----HFGKLDILVNAAAGN----FL-VSAEDLSPNG----FRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGS  151 (299)
Q Consensus        85 ~~~----~~g~id~lv~~ag~~----~~-~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~  151 (299)
                      +.+    .+|++|+||||||+.    .. ....+.+.++    ++..+++|+.+++.+++.+.+.|.+.....   ..+.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~---~~~i 2289 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIAS---RLHV 2289 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC---CEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc---eeEE
Confidence            998    899999999999971    11 1222223333    455599999999999999999998865211   0123


Q ss_pred             EEEeccccccccCCCchHHHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCC
Q 022335          152 ILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE--WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLY  229 (299)
Q Consensus       152 iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e--~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  229 (299)
                      |+++++..+.  .++...|++||+|+++|+++++.|  ++ + +|+||+++||+|+++++.....   .........+.+
T Consensus      2290 i~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a-~-~IrVn~v~PG~v~tT~l~~~~~---~~~~~~~~~~~r 2362 (3089)
T 3zen_D         2290 VLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWA-E-RVSLAHALIGWTKGTGLMGQND---AIVSAVEEAGVT 2362 (3089)
T ss_dssp             EEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTT-T-TEEEEEEECCCEECSTTTTTTT---TTHHHHGGGSCB
T ss_pred             EEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccC-C-CeEEEEEeecccCCCcccccch---hHHHHHHhcCCC
Confidence            4444444333  334568999999999999999999  64 4 7999999999998554432211   111222233443


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCc-cCcEEEeC--Ccccc
Q 022335          230 KLGEKWDIAMAALYLTSDTGKYV-NGTTLIVD--GGLWL  265 (299)
Q Consensus       230 ~~~~~~dva~~~~~l~s~~~~~~-~G~~i~~d--gg~~~  265 (299)
                      + .+|+|+|.+++||+|+...++ +|+.+.+|  ||+..
T Consensus      2363 ~-~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2363 T-YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             C-EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             C-CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            3 499999999999999876654 45666655  99854

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=2.9e-30  Score=239.57  Aligned_cols=214  Identities=17%  Similarity=0.141  Sum_probs=175.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK---QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++|||||++|||++++++|+++|+ +|++++|+.   +..+++.+++.+.+.++.++.||++|.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999999999999999 788999974   3467778888888889999999999999999999998776 


Q ss_pred             CCccEEEEcCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +++|+||||||+. ....+.+.+.++|++++++|+.+++++.+.+.+.    .       .++||++||..+..+.+++.
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~-------~~~iV~~SS~a~~~g~~g~~  386 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----D-------LDAFVLFSSGAAVWGSGGQP  386 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C-------CSEEEEEEEHHHHTTCTTCH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C-------CCEEEEEeChHhcCCCCCcH
Confidence            7999999999997 6688999999999999999999999998877543    2       57899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|+++|+++++|++.++     .+||++++|+||++.++.+.....   ....+.. .. ....+|++++..+.+++...
T Consensus       387 ~YaAaKa~ldala~~~~-----~~Gi~v~sV~pG~w~~~gm~~~~~---~~~~l~~-~g-~~~l~pe~~~~~l~~~l~~~  456 (496)
T 3mje_A          387 GYAAANAYLDALAEHRR-----SLGLTASSVAWGTWGEVGMATDPE---VHDRLVR-QG-VLAMEPEHALGALDQMLEND  456 (496)
T ss_dssp             HHHHHHHHHHHHHHHHH-----HTTCCCEEEEECEESSSCC---------CHHHHH-TT-EEEECHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHH-----hcCCeEEEEECCcccCCccccChH---HHHHHHh-cC-CCCCCHHHHHHHHHHHHcCC
Confidence            99999999999887443     559999999999987654433211   1111111 11 12358999999999988654


Q ss_pred             C
Q 022335          249 G  249 (299)
Q Consensus       249 ~  249 (299)
                      .
T Consensus       457 ~  457 (496)
T 3mje_A          457 D  457 (496)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.6e-29  Score=247.36  Aligned_cols=216  Identities=18%  Similarity=0.122  Sum_probs=176.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HcCCe-EEEEeCC---hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFG-KHGAS-VAIMGRR---KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la-~~G~~-Vv~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .++++|||||++|||+++|++|+ ++|++ |++++|+   .+..+++.++++..+.++.++.||+++.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 79995 9999998   4557788888888889999999999999999999999987


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .+ ++|+||||||+.....+.+.+.++|+..+++|+.|++++.+++.+.|             +||++||..+..+.+++
T Consensus       609 ~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------------~iV~~SS~ag~~g~~g~  674 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------------ALVLFSSVSGVLGSGGQ  674 (795)
T ss_dssp             TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------------EEEEEEETHHHHTCSSC
T ss_pred             hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------------EEEEEccHHhcCCCCCC
Confidence            76 99999999999888889999999999999999999999999986544             59999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|+++|+    |+++|+.+++ .+||++|+|+||++.++.+..... +... .......... .++++....+...+..
T Consensus       675 ~~YaAaka----~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~~~-~~~~-~~~~~~g~~~-l~~~e~~~~~~~~l~~  746 (795)
T 3slk_A          675 GNYAAANS----FLDALAQQRQ-SRGLPTRSLAWGPWAEHGMASTLR-EAEQ-DRLARSGLLP-ISTEEGLSQFDAACGG  746 (795)
T ss_dssp             HHHHHHHH----HHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHHHH-HHHH-HHHHHTTBCC-CCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHH----HHHHHHHHHH-HcCCeEEEEECCeECcchhhcccc-HHHH-HHHHhcCCCC-CCHHHHHHHHHHHHhC
Confidence            99999996    5556666775 779999999999997654322211 1111 1222233333 5677777776666654


Q ss_pred             CCC
Q 022335          248 TGK  250 (299)
Q Consensus       248 ~~~  250 (299)
                      ...
T Consensus       747 ~~~  749 (795)
T 3slk_A          747 AHT  749 (795)
T ss_dssp             SCS
T ss_pred             CCc
Confidence            433

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=8.1e-28  Score=223.66  Aligned_cols=214  Identities=14%  Similarity=0.075  Sum_probs=173.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChh---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQ---VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      -.++++|||||+||||++++++|+++|++ |++++|+..   ..+++.+++...+.++.++.||+++.++++++++++ .
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            35899999999999999999999999996 999999875   456777788777888999999999999999999988 5


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      .++++|+||||||+.....+.+.+.++++.++++|+.+++++.+++.+    .+       .++||++||..+..+.+++
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~-------~~~~V~~SS~a~~~g~~g~  371 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-------LTAFVLFSSFASAFGAPGL  371 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-------CSEEEEEEEHHHHTCCTTC
T ss_pred             hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC-------CCEEEEEcChHhcCCCCCC
Confidence            678999999999998777888899999999999999999999987643    22       5899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|+++|++++.|++.++     .+|+++++|+||++.++.+....    ....+ .. ......+++++++.+..++..
T Consensus       372 ~~Yaaaka~l~~la~~~~-----~~gi~v~~i~pG~~~~~gm~~~~----~~~~~-~~-~g~~~i~~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRR-----SDGLPATAVAWGTWAGSGMAEGP----VADRF-RR-HGVIEMPPETACRALQNALDR  440 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHH-----HTTCCCEEEEECCBC----------------C-TT-TTEECBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHH-----hcCCeEEEEECCeeCCCcccchh----HHHHH-Hh-cCCCCCCHHHHHHHHHHHHhC
Confidence            999999999998876443     45899999999999754332111    11110 00 111357999999999998864


Q ss_pred             C
Q 022335          248 T  248 (299)
Q Consensus       248 ~  248 (299)
                      .
T Consensus       441 ~  441 (486)
T 2fr1_A          441 A  441 (486)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=3.8e-27  Score=199.40  Aligned_cols=207  Identities=18%  Similarity=0.175  Sum_probs=157.2

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcE-EEEEcCCCCHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA-VGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .+...|+|+++|||||+|+||++++++|+++|++|++++|+++.++.+.+      .++ .++.+|++         +.+
T Consensus        14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~   78 (236)
T 3e8x_A           14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------EDF   78 (236)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SCC
T ss_pred             ccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HHH
Confidence            44557899999999999999999999999999999999999887665432      257 88999999         334


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-  164 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-  164 (299)
                      .+.++++|+||||||....        +++++.+++|+.++.++++++..    .+       .++||++||..+..+. 
T Consensus        79 ~~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~-------~~~iv~~SS~~~~~~~~  139 (236)
T 3e8x_A           79 SHAFASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEAEK----RG-------IKRFIMVSSVGTVDPDQ  139 (236)
T ss_dssp             GGGGTTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHHHH----HT-------CCEEEEECCTTCSCGGG
T ss_pred             HHHHcCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHHHH----cC-------CCEEEEEecCCCCCCCC
Confidence            4456799999999996532        35788999999999999988843    22       4799999998776664 


Q ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          165 --WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       165 --~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                        .....|+.+|++++.+.+        ..||++++|+||++.++........      .........+.+++|+|++++
T Consensus       140 ~~~~~~~Y~~sK~~~e~~~~--------~~gi~~~~lrpg~v~~~~~~~~~~~------~~~~~~~~~~i~~~Dva~~~~  205 (236)
T 3e8x_A          140 GPMNMRHYLVAKRLADDELK--------RSSLDYTIVRPGPLSNEESTGKVTV------SPHFSEITRSITRHDVAKVIA  205 (236)
T ss_dssp             SCGGGHHHHHHHHHHHHHHH--------HSSSEEEEEEECSEECSCCCSEEEE------ESSCSCCCCCEEHHHHHHHHH
T ss_pred             ChhhhhhHHHHHHHHHHHHH--------HCCCCEEEEeCCcccCCCCCCeEEe------ccCCCcccCcEeHHHHHHHHH
Confidence              467899999999998875        2389999999999986643222110      001122356789999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCcc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +++....  ..|+.+++++|.
T Consensus       206 ~~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          206 ELVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             HHTTCGG--GTTEEEEEEECS
T ss_pred             HHhcCcc--ccCCeEEEeCCC
Confidence            9997643  789999998773

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=8.7e-27  Score=217.60  Aligned_cols=209  Identities=20%  Similarity=0.131  Sum_probs=171.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChh---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQ---VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++|||||+||||++++++|+++|+ +|++++|+..   ..+++.+++...+.++.++.||+++.+++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            589999999999999999999999999 5999999874   45677788877788899999999999999999886    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                       +++|+||||||+.....+.+.+.++|+.++++|+.+++++.+++.+..   .       .++||++||..+..+.+++.
T Consensus       334 -~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~-------~~~~V~~SS~a~~~g~~g~~  402 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---G-------LDAFVLFSSVTGTWGNAGQG  402 (511)
T ss_dssp             -SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---T-------CCCEEEEEEGGGTTCCTTBH
T ss_pred             -CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---C-------CCEEEEEeCHHhcCCCCCCH
Confidence             689999999999887888889999999999999999999988764220   1       47899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      .|+++|++++.|++.+    . ..|+++++|+||++..+.+....    ....... . .....+++++++.+...+..
T Consensus       403 ~YaaaKa~ld~la~~~----~-~~gi~v~sv~pG~~~~tgm~~~~----~~~~~~~-~-g~~~l~~e~~a~~l~~al~~  470 (511)
T 2z5l_A          403 AYAAANAALDALAERR----R-AAGLPATSVAWGLWGGGGMAAGA----GEESLSR-R-GLRAMDPDAAVDALLGAMGR  470 (511)
T ss_dssp             HHHHHHHHHHHHHHHH----H-TTTCCCEEEEECCBCSTTCCCCH----HHHHHHH-H-TBCCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH----H-HcCCcEEEEECCcccCCcccccc----cHHHHHh-c-CCCCCCHHHHHHHHHHHHhC
Confidence            9999999999998754    3 56999999999999433332221    1111111 1 11357999999999998854

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=3.9e-25  Score=185.13  Aligned_cols=202  Identities=9%  Similarity=0.059  Sum_probs=152.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFG-KHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la-~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|++|||||+|+||++++++|+ ++|++|++++|+++ .++.+.    ....++.++.+|++++++++++++       +
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~   73 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------N   73 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------C
Confidence            3789999999999999999999 89999999999987 554432    345679999999999999988876       7


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch---
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI---  168 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~---  168 (299)
                      +|+||||+|..                   |+.     ++.+++.|++.+       .++||++||..+..+.+...   
T Consensus        74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~-------~~~iv~iSs~~~~~~~~~~~~~~  122 (221)
T 3r6d_A           74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXN-------IRRVIGVSMAGLSGEFPVALEKW  122 (221)
T ss_dssp             CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTT-------CCEEEEEEETTTTSCSCHHHHHH
T ss_pred             CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcC-------CCeEEEEeeceecCCCCcccccc
Confidence            89999999853                   222     788888888865       57999999998887666554   


Q ss_pred             -------HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          169 -------HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       169 -------~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                             .|+.+|.+++.+.+.        .||++++|+||++.+++.........     ......+...+++|+|+++
T Consensus       123 ~~~~~~~~y~~~K~~~e~~~~~--------~~i~~~~vrpg~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~dvA~~~  189 (221)
T 3r6d_A          123 TFDNLPISYVQGERQARNVLRE--------SNLNYTILRLTWLYNDPEXTDYELIP-----EGAQFNDAQVSREAVVKAI  189 (221)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHHH--------SCSEEEEEEECEEECCTTCCCCEEEC-----TTSCCCCCEEEHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHHh--------CCCCEEEEechhhcCCCCCcceeecc-----CCccCCCceeeHHHHHHHH
Confidence                   899999999887642        48999999999997653322221100     0111223368899999999


Q ss_pred             HHHc--CCCCCCccCcEEEeCCccccCCCCC
Q 022335          242 LYLT--SDTGKYVNGTTLIVDGGLWLSRPRH  270 (299)
Q Consensus       242 ~~l~--s~~~~~~~G~~i~~dgg~~~~~~~~  270 (299)
                      ++++  ++...++++.....+.+.....|.+
T Consensus       190 ~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~  220 (221)
T 3r6d_A          190 FDILHAADETPFHRTSIGVGEPGTHYDXPSF  220 (221)
T ss_dssp             HHHHTCSCCGGGTTEEEEEECTTCCCSSCCC
T ss_pred             HHHHHhcChhhhhcceeeecCCCCCCCCCCC
Confidence            9999  8877777666666655554444443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=7e-26  Score=195.27  Aligned_cols=183  Identities=12%  Similarity=0.080  Sum_probs=148.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++|++|||||+|+||++++++|+++|++|++++|++...+         +.++.++.+|+++.++++++++       ++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   65 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------GC   65 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------CC
Confidence            4689999999999999999999999999999999875322         4579999999999999998877       79


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-----------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-----------  161 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-----------  161 (299)
                      |+||||||+..        .++|++.+++|+.+++++++++.+    .+       .++||++||..+.           
T Consensus        66 D~vi~~Ag~~~--------~~~~~~~~~~N~~g~~~l~~a~~~----~~-------~~~iv~~SS~~~~g~~~~~~~~~e  126 (267)
T 3rft_A           66 DGIVHLGGISV--------EKPFEQILQGNIIGLYNLYEAARA----HG-------QPRIVFASSNHTIGYYPQTERLGP  126 (267)
T ss_dssp             SEEEECCSCCS--------CCCHHHHHHHHTHHHHHHHHHHHH----TT-------CCEEEEEEEGGGGTTSBTTSCBCT
T ss_pred             CEEEECCCCcC--------cCCHHHHHHHHHHHHHHHHHHHHH----cC-------CCEEEEEcchHHhCCCCCCCCCCC
Confidence            99999999742        234788999999999999999843    22       5799999998876           


Q ss_pred             -ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          162 -TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       162 -~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                       .+......|+.||++.+.+++.++.++    |+++++|+||.+.+++..     .....         .+..++|++..
T Consensus       127 ~~~~~~~~~Y~~sK~~~e~~~~~~a~~~----g~~~~~vr~~~v~~~~~~-----~~~~~---------~~~~~~d~a~~  188 (267)
T 3rft_A          127 DVPARPDGLYGVSKCFGENLARMYFDKF----GQETALVRIGSCTPEPNN-----YRMLS---------TWFSHDDFVSL  188 (267)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECBCSSSCCS-----TTHHH---------HBCCHHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHh----CCeEEEEEeecccCCCCC-----CCcee---------eEEcHHHHHHH
Confidence             334456889999999999999999876    589999999988654221     11111         24688999999


Q ss_pred             HHHHcCCC
Q 022335          241 ALYLTSDT  248 (299)
Q Consensus       241 ~~~l~s~~  248 (299)
                      +..++...
T Consensus       189 ~~~~~~~~  196 (267)
T 3rft_A          189 IEAVFRAP  196 (267)
T ss_dssp             HHHHHHCS
T ss_pred             HHHHHhCC
Confidence            98888643

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.92  E-value=3.3e-24  Score=190.53  Aligned_cols=224  Identities=15%  Similarity=0.046  Sum_probs=167.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEE-EcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGF-EGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~-~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+... +.++.++ .+|+++.++++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            467999999999999999999999999999999999988777666655432 3578888 899999988777654     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-cC---
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-AS---  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~~---  164 (299)
                        ++|+|||+||.....       +++++.+++|+.++.++++++.+.   ..       .++||++||...+. +.   
T Consensus        83 --~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~-------~~~iv~~SS~~~~~~~~~~~  143 (342)
T 1y1p_A           83 --GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PS-------VKRFVLTSSTVSALIPKPNV  143 (342)
T ss_dssp             --TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TT-------CCEEEEECCGGGTCCCCTTC
T ss_pred             --CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CC-------CcEEEEeccHHHhcCCCCCC
Confidence              799999999975432       235678999999999999988641   11       47899999987652 21   


Q ss_pred             ---------------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC---
Q 022335          165 ---------------------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---  214 (299)
Q Consensus       165 ---------------------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~---  214 (299)
                                                 .....|+.||++.+.+++.++.+++ . ++++++++||.+.++.......   
T Consensus       144 ~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~-~~~~~~~rp~~v~g~~~~~~~~~~~  221 (342)
T 1y1p_A          144 EGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-P-HFTLNAVLPNYTIGTIFDPETQSGS  221 (342)
T ss_dssp             CCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-C-SSEEEEEEESEEECCCSCTTTCCCH
T ss_pred             CCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC-C-CceEEEEcCCceECCCCCCCCCCcc
Confidence                                       1246899999999999999999985 5 8999999999997664332211   


Q ss_pred             chHHhHHHHhc--------CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          215 PDEINSKARDY--------MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       215 ~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      ...+.......        .+.+.+..++|+|++++.++..  ...+|+.+..+|+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          222 TSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence            11111221111        1334568899999999998854  2356776666654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=5e-24  Score=189.85  Aligned_cols=224  Identities=14%  Similarity=0.118  Sum_probs=166.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++|||||+|+||++++++|+++|++|++++|+. ...+...+.+.. ..++.++.+|+++.++++++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            4799999999999999999999999999999853 222333344443 346889999999999999988752     699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----------  162 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----------  162 (299)
                      +|||+||....    +.+.++++..+++|+.++.++++++.+.+.          .++||++||...+.           
T Consensus        76 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----------~~~iv~~SS~~v~g~~~~~~~~e~~  141 (347)
T 1orr_A           76 SCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----------NCNIIYSSTNKVYGDLEQYKYNETE  141 (347)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----------TCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             EEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----------CceEEEeccHHHhCCCCcCCccccc
Confidence            99999996431    123456788999999999999999987642          26899999976432           


Q ss_pred             ----------------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---hHHhHHH-
Q 022335          163 ----------------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---DEINSKA-  222 (299)
Q Consensus       163 ----------------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~-  222 (299)
                                      +......|+.+|++.+.+++.++.++    |+++++++||++.++........   ....... 
T Consensus       142 ~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~  217 (347)
T 1orr_A          142 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF----GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAV  217 (347)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHH
T ss_pred             ccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHH
Confidence                            22356789999999999999998876    69999999999986643221111   1111111 


Q ss_pred             HhcC----CC---------CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          223 RDYM----PL---------YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       223 ~~~~----~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ....    +.         ..+..++|+|+++++++.. ....+|+.+++++|.
T Consensus       218 ~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          218 EIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             hCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            1111    22         1256899999999999863 235789999999985

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=1.6e-24  Score=191.27  Aligned_cols=218  Identities=16%  Similarity=0.104  Sum_probs=164.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .+.+++|||||+|+||++++++|+++|++|++++|+... +.    +     ++.++.+|+++.++++++++.     ++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD-----IK   74 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----HC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----cC
Confidence            357899999999999999999999999999999998754 11    1     588999999999999988875     37


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-------  164 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  164 (299)
                      +|+|||+||.....    .+.++++..+++|+.++.++++++ +.+.  .       .++||++||...+.+.       
T Consensus        75 ~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-------~~~iv~~SS~~v~g~~~~~~~~~  140 (321)
T 2pk3_A           75 PDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-------DCRILTIGSSEEYGMILPEESPV  140 (321)
T ss_dssp             CSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-------CCEEEEEEEGGGTBSCCGGGCSB
T ss_pred             CCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-------CCeEEEEccHHhcCCCCCCCCCC
Confidence            99999999965321    122357889999999999999999 5542  2       4789999998755332       


Q ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh---c----------
Q 022335          165 ------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD---Y----------  225 (299)
Q Consensus       165 ------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~---~----------  225 (299)
                            .....|+.+|++.+.+++.++.++    |+++++++||.+.++..........+......   .          
T Consensus       141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  216 (321)
T 2pk3_A          141 SEENQLRPMSPYGVSKASVGMLARQYVKAY----GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGN  216 (321)
T ss_dssp             CTTSCCBCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESC
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHc----CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCC
Confidence                  346789999999999999998775    69999999999976643321111122222211   1          


Q ss_pred             -CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          226 -MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       226 -~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                       .+...+..++|+|+++++++...   .+|+.+++.+|..+
T Consensus       217 ~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          217 LEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             SSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             CCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence             12234678999999999998653   47899999988654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=1.8e-24  Score=192.52  Aligned_cols=230  Identities=13%  Similarity=0.048  Sum_probs=167.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .++++|||||+|+||++++++|+++|++|++++|+.+..+...+++... +.++.++.+|+++++++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            3679999999999999999999999999999999876665555555443 55789999999999999998875     48


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--------  163 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--------  163 (299)
                      +|+||||||.....    ...+...+.+++|+.++.++++++    ++.+       .++||++||...+..        
T Consensus        79 ~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-------~~~iv~~SS~~~~g~~~~~~~~e  143 (341)
T 3enk_A           79 ITAAIHFAALKAVG----ESVAKPIEYYRNNLDSLLSLLRVM----RERA-------VKRIVFSSSATVYGVPERSPIDE  143 (341)
T ss_dssp             CCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTT-------CCEEEEEEEGGGBCSCSSSSBCT
T ss_pred             CcEEEECccccccC----ccccChHHHHHHHHHHHHHHHHHH----HhCC-------CCEEEEEecceEecCCCCCCCCC
Confidence            99999999975321    122334578899999999886654    4443       479999999765522        


Q ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-------Cc---hHHhHHHHhc-C---
Q 022335          164 ---SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-------AP---DEINSKARDY-M---  226 (299)
Q Consensus       164 ---~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-------~~---~~~~~~~~~~-~---  226 (299)
                         ......|+.+|++.+.+++.++.++.   |+++++++|+.+..+.....+       ..   .......... .   
T Consensus       144 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (341)
T 3enk_A          144 TFPLSATNPYGQTKLMAEQILRDVEAADP---SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLR  220 (341)
T ss_dssp             TSCCBCSSHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHhhcCC---CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceE
Confidence               22346899999999999999998863   699999999988655221100       00   1111111111 1   


Q ss_pred             ------------CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 ------------PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 ------------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                                  ....+...+|+|+++++++........|+.+++.+|..+
T Consensus       221 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          221 VFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             EECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             EeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                        112356789999999998864223357899999988654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.92  E-value=4.5e-24  Score=190.59  Aligned_cols=218  Identities=15%  Similarity=0.108  Sum_probs=168.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKH-GA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+++|++|||||+|+||++++++|+++ |+ +|++++|++.+.+.+.+++.  ..++.++.+|+++.++++++++     
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~-----   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE-----   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh-----
Confidence            478999999999999999999999999 98 99999999887777666553  3579999999999999887765     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                        ++|+|||+||.....    .......+.+++|+.++.++++++.+.    +       .++||++||..+..|   ..
T Consensus        91 --~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~-------v~~~V~~SS~~~~~p---~~  150 (344)
T 2gn4_A           91 --GVDICIHAAALKHVP----IAEYNPLECIKTNIMGASNVINACLKN----A-------ISQVIALSTDKAANP---IN  150 (344)
T ss_dssp             --TCSEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHT----T-------CSEEEEECCGGGSSC---CS
T ss_pred             --cCCEEEECCCCCCCC----chhcCHHHHHHHHHHHHHHHHHHHHhC----C-------CCEEEEecCCccCCC---cc
Confidence              799999999965311    112335678999999999999999864    2       478999999876654   46


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC---------CCCCCCCHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM---------PLYKLGEKWDIAM  239 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~  239 (299)
                      .|++||++.+.+++.++.+++ ..|+++++++||.+.++..  .. .+.+........         ..+.+.+++|+|+
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~-~~g~~~~~vRpg~v~g~~~--~~-i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~  226 (344)
T 2gn4_A          151 LYGATKLCSDKLFVSANNFKG-SSQTQFSVVRYGNVVGSRG--SV-VPFFKKLVQNKASEIPITDIRMTRFWITLDEGVS  226 (344)
T ss_dssp             HHHHHHHHHHHHHHHGGGCCC-SSCCEEEEECCCEETTCTT--SH-HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-CCCcEEEEEEeccEECCCC--CH-HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHH
Confidence            899999999999999998885 7799999999999976431  11 112222221111         1123578999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCc
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      ++++++...   ..|+.++++++
T Consensus       227 ~v~~~l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          227 FVLKSLKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHHHHHHHC---CSSCEEEECCC
T ss_pred             HHHHHHhhc---cCCCEEecCCC
Confidence            999988643   36788887665

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.92  E-value=2.5e-24  Score=190.23  Aligned_cols=257  Identities=18%  Similarity=0.088  Sum_probs=184.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHH-HcCCeEEEEeCChh------------HHHHHHHHHHhcCCcEEEEEcCCCCHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFG-KHGASVAIMGRRKQ------------VLDAAVSALRSLGIKAVGFEGDVRRQEH   77 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la-~~G~~Vv~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~Dl~~~~~   77 (299)
                      .+.+|++||||||+|||+|++..|+ +.|++|+++.+..+            ..+...+++++.+.+...++||++++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4568999999999999999999999 68999999987643            2345667778889999999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCCCCC-------------C---------------------CCCCCHHHHH---HHHH
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAGNFLV-------------S---------------------AEDLSPNGFR---TVMD  120 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~~~~~-------------~---------------------~~~~~~~~~~---~~~~  120 (299)
                      ++++++++.+.+|++|+||||++.....             +                     +...+.++++   ..|.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            9999999999999999999999865211             1                     1123445554   4455


Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc--hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 022335          121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ--IHVAAAKAAVDAITRNLALEWGADYDIRVNG  198 (299)
Q Consensus       121 ~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~  198 (299)
                      ......|...+...+.|.+         ++++|.+|+..+..-.|.|  +.++++|++|+..++.|+.+++   ++++++
T Consensus       207 ~s~~s~w~~al~~a~lla~---------G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~---~~~a~v  274 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEE---------GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP---SIRAFV  274 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEE---------EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT---TEEEEE
T ss_pred             hhHHHHHHHHHHhhhcccC---------CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC---CCcEEE
Confidence            5666777777777766643         6899999999887666644  5899999999999999999996   589999


Q ss_pred             EeCCccCCCCCCCCCCc-hHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCCCCCCc-hh--
Q 022335          199 IAPGPIGDTPGMNKLAP-DEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPRHLP-KD--  274 (299)
Q Consensus       199 i~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~-~~--  274 (299)
                      +.+|.+.|. ....++. +-......+-  ++..++-|.+.+.+.+|..+. -|-++....+|..-.+....|.. +.  
T Consensus       275 ~v~~a~vT~-AssaIP~~ply~~~l~kv--mk~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~r~d~~el~~~vq  350 (401)
T 4ggo_A          275 SVNKGLVTR-ASAVIPVIPLYLASLFKV--MKEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRIRIDDWELEEDVQ  350 (401)
T ss_dssp             EECCCCCCT-TGGGSSSHHHHHHHHHHH--HHHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCEESCTTTTCHHHH
T ss_pred             EEcCccccc-hhhcCCCchHHHHHHHHH--HHhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCccCchhhcCHHHH
Confidence            999999754 3333332 1111111110  112245667889888888643 22233345577766665666653 33  


Q ss_pred             -HHHHHhHhh
Q 022335          275 -AVKQLSRTV  283 (299)
Q Consensus       275 -~~~~~~~~~  283 (299)
                       ...++|..+
T Consensus       351 ~~v~~~~~~~  360 (401)
T 4ggo_A          351 KAVSALMEKV  360 (401)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHh
Confidence             355556544

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=1e-25  Score=191.03  Aligned_cols=196  Identities=15%  Similarity=0.104  Sum_probs=147.5

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++|++|||||+|+||++++++|+++|+  +|++++|+++..+...      ..++.++.+|++++++++++++      
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~------   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ------   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS------
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc------
Confidence            5789999999999999999999999999  9999999875432211      1257889999999988777654      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                       ++|+||||||....       ..+++..+++|+.++..+++++.    +..       .++||++||..+..+  ....
T Consensus        84 -~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~-------~~~iv~~SS~~~~~~--~~~~  142 (242)
T 2bka_A           84 -GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELAK----AGG-------CKHFNLLSSKGADKS--SNFL  142 (242)
T ss_dssp             -SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHHH----HTT-------CCEEEEECCTTCCTT--CSSH
T ss_pred             -CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHHH----HCC-------CCEEEEEccCcCCCC--Ccch
Confidence             79999999996432       24578899999999988877643    333       479999999887653  3457


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCccCCCCCCCCCCchHHhHHHHhcCC----CCCCCCHHHHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDI-RVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP----LYKLGEKWDIAMAALYL  244 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l  244 (299)
                      |+.+|++++.+++.+        ++ ++++|+||++.++..... ..+..........|    .+++.+++|+|++++++
T Consensus       143 Y~~sK~~~e~~~~~~--------~~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  213 (242)
T 2bka_A          143 YLQVKGEVEAKVEEL--------KFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNN  213 (242)
T ss_dssp             HHHHHHHHHHHHHTT--------CCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc--------CCCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCccccCCcccCHHHHHHHHHHH
Confidence            999999999887542        45 899999999986642211 11122222222334    35678999999999999


Q ss_pred             cCCCC
Q 022335          245 TSDTG  249 (299)
Q Consensus       245 ~s~~~  249 (299)
                      +++..
T Consensus       214 ~~~~~  218 (242)
T 2bka_A          214 VVRPR  218 (242)
T ss_dssp             HTSCC
T ss_pred             HhCcc
Confidence            97654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.91  E-value=4.5e-24  Score=189.49  Aligned_cols=222  Identities=16%  Similarity=0.045  Sum_probs=162.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChh--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQ--VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++. ...++.++.+|+++.+++++++.      
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELVR------   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHhh------
Confidence            5679999999999999999999997  89999998642  11111 1111 13478999999999999888873      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-------  162 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-------  162 (299)
                       ++|+|||+||....    +.+.++++..+++|+.++.++++++.+.   ..       .++||++||...+.       
T Consensus        75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~-------~~~iv~~SS~~vyg~~~~~~~  139 (336)
T 2hun_A           75 -KVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NP-------EVRFVHVSTDEVYGDILKGSF  139 (336)
T ss_dssp             -TCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CT-------TSEEEEEEEGGGGCCCSSSCB
T ss_pred             -CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CC-------CcEEEEeccHHHHCCCCCCCc
Confidence             79999999996431    1233557788999999999999999876   11       37999999976432       


Q ss_pred             ----cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC---------CCC
Q 022335          163 ----ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM---------PLY  229 (299)
Q Consensus       163 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~  229 (299)
                          +......|+.+|++.+.+++.++.++    |+++++++||.+.++...................         ...
T Consensus       140 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (336)
T 2hun_A          140 TENDRLMPSSPYSATKAASDMLVLGWTRTY----NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVR  215 (336)
T ss_dssp             CTTBCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCcee
Confidence                23446789999999999999998775    6999999999997664321111112222222211         123


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       230 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+..++|+|+++++++...   .+|+.+++++|..+
T Consensus       216 ~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          216 DWLYVEDHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             EEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             eeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            4677999999999998643   47999999998754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.91  E-value=6e-24  Score=188.57  Aligned_cols=218  Identities=16%  Similarity=0.078  Sum_probs=157.3

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ..-..++++++|||||+|+||++++++|+++|++|++++|+.+......+++    .++.++.+|+++.++++++++++ 
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc-
Confidence            3444678999999999999999999999999999999999754322111111    46889999999999999988765 


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC--
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS--  164 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~--  164 (299)
                          ++|+||||||.....     +.++++  +++|+.++.++++++...    +       .++||++||...+.+.  
T Consensus        88 ----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~-------~~~iV~~SS~~~~~~~~~  145 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASKA----G-------VKRLLNFQTALCYGRPAT  145 (330)
T ss_dssp             ----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHH----T-------CSEEEEEEEGGGGCSCSS
T ss_pred             ----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHHc----C-------CCEEEEecCHHHhCCCcc
Confidence                799999999975432     334555  999999999999998732    2       4799999998775443  


Q ss_pred             ---C------CchHHHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEeCCccCCCCCCCCCCchHHhHHHHhcCC------C
Q 022335          165 ---W------YQIHVAAAKAAVDAITRNLALEWGADYDIR-VNGIAPGPIGDTPGMNKLAPDEINSKARDYMP------L  228 (299)
Q Consensus       165 ---~------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~-v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~  228 (299)
                         +      ....|+.+|++++.+++.+  ++. ...|| ++++.||. .+.     + .............      .
T Consensus       146 ~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~-~~~iR~~~v~gp~~-~~~-----~-~~~~~~~~~~~~~~~~~~~~  215 (330)
T 2pzm_A          146 VPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVP-VVSLRLANVTGPRL-AIG-----P-IPTFYKRLKAGQKCFCSDTV  215 (330)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSC-EEEEEECEEECTTC-CSS-----H-HHHHHHHHHTTCCCCEESCE
T ss_pred             CCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCC-EEEEeeeeeECcCC-CCC-----H-HHHHHHHHHcCCEEeCCCCE
Confidence               2      5678999999999999876  442 33566 56666663 111     1 0111111111101      3


Q ss_pred             CCCCCHHHHHH-HHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAM-AALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~-~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..+..++|+|+ +++++++...    |+.+++++|..+
T Consensus       216 ~~~i~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          216 RDFLDMSDFLAIADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             ECEEEHHHHHHHHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             ecceeHHHHHHHHHHHHhhcCC----CCEEEeCCCCCC
Confidence            45688999999 9999997532    899999988654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.91  E-value=4.1e-24  Score=178.69  Aligned_cols=192  Identities=14%  Similarity=0.139  Sum_probs=153.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++|||||+|+||++++++|+++|++|++++|+.+..+..        .++.++.+|+++ .++++++++       ++|+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence            699999999999999999999999999999998653322        469999999999 988877765       7999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-------c
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-------Q  167 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------~  167 (299)
                      ||||||....            +.+++|+.++.++++++.    +.+       .++||++||..+..+.+.       .
T Consensus        67 vi~~ag~~~~------------~~~~~n~~~~~~l~~a~~----~~~-------~~~iv~~SS~~~~~~~~~~e~~~~~~  123 (219)
T 3dqp_A           67 IINVSGSGGK------------SLLKVDLYGAVKLMQAAE----KAE-------VKRFILLSTIFSLQPEKWIGAGFDAL  123 (219)
T ss_dssp             EEECCCCTTS------------SCCCCCCHHHHHHHHHHH----HTT-------CCEEEEECCTTTTCGGGCCSHHHHHT
T ss_pred             EEECCcCCCC------------CcEeEeHHHHHHHHHHHH----HhC-------CCEEEEECcccccCCCcccccccccc
Confidence            9999997642            167889999998888773    333       478999999988776666       7


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|+.+|++.+.+.+      . ..|+++++++||++.++.....+..         ......+.+++|+|+++++++..
T Consensus       124 ~~Y~~sK~~~e~~~~------~-~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~~  187 (219)
T 3dqp_A          124 KDYYIAKHFADLYLT------K-ETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVMT  187 (219)
T ss_dssp             HHHHHHHHHHHHHHH------H-SCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHHHH------h-ccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHhC
Confidence            899999999998886      2 5589999999999976543222111         13445678999999999999976


Q ss_pred             CCCCccCcEEEeCCcc
Q 022335          248 TGKYVNGTTLIVDGGL  263 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~  263 (299)
                      ..  ..|+.+++.+|.
T Consensus       188 ~~--~~g~~~~i~~g~  201 (219)
T 3dqp_A          188 DH--SIGKVISMHNGK  201 (219)
T ss_dssp             GG--GTTEEEEEEECS
T ss_pred             cc--ccCcEEEeCCCC
Confidence            43  459999997663

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.91  E-value=2.8e-23  Score=185.74  Aligned_cols=227  Identities=15%  Similarity=-0.001  Sum_probs=167.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh----HHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ----VLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~----~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ++++++|||||+|+||++++++|+++|++|++++|+..    .++.+.+++... ..++.++.+|+++.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            56889999999999999999999999999999999753    333333322111 2468999999999999888776   


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-  165 (299)
                          ++|+|||+||.....    .+.++++..+++|+.++.++++++.+.    +       .++||++||...+.+.+ 
T Consensus       102 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~~v~~SS~~~~~~~~~  162 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K-------VQSFTYAASSSTYGDHPG  162 (352)
T ss_dssp             ----TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-------CSEEEEEEEGGGGTTCCC
T ss_pred             ----CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-------CCEEEEeccHHhcCCCCC
Confidence                799999999964321    134567889999999999999988642    2       47899999987764432 


Q ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC--C--chHHhHHHHhcCCC---
Q 022335          166 ----------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL--A--PDEINSKARDYMPL---  228 (299)
Q Consensus       166 ----------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~--~--~~~~~~~~~~~~~~---  228 (299)
                                ....|+.+|++.+.+++.++.++    |+++++++||.+.++......  .  ...+........+.   
T Consensus       163 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (352)
T 1sb8_A          163 LPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYIN  238 (352)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEE
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEe
Confidence                      35689999999999999998876    699999999999765432221  0  11222222222221   


Q ss_pred             ------CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 ------YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                            ..+..++|+|+++++++... ....|+.+++.+|..+
T Consensus       239 g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          239 GDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             SSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             CCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence                  24678999999998888642 2457899999887643

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=7.1e-24  Score=190.06  Aligned_cols=230  Identities=18%  Similarity=0.110  Sum_probs=166.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChh--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           16 VALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQ--VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..+.+ .++. .+.++.++.+|+++.+++++++++.     ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            5999999999999999999998 799999998641  11221 1111 1347899999999999999988753     89


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----------  162 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----------  162 (299)
                      |+|||+||....    +.+.+++++.+++|+.++.++++++.+.|...+..  ...+++||++||...+.          
T Consensus        75 d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~--~~~~~~iv~~SS~~v~g~~~~~~~~~~  148 (361)
T 1kew_A           75 DAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGED--KKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             SEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH--HHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccc--cccCceEEEeCCHHHhCCCcccccccc
Confidence            999999996531    12345677899999999999999999987531100  00025899999975332          


Q ss_pred             -----------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC-----
Q 022335          163 -----------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-----  226 (299)
Q Consensus       163 -----------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-----  226 (299)
                                 +......|+.+|++.+.+++.++.++    |+++++++||.+.++...................     
T Consensus       149 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  224 (361)
T 1kew_A          149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred             cccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEc
Confidence                       12346789999999999999999876    6999999999997664321111112222222211     


Q ss_pred             ----CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 ----PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                          ....+..++|+|++++++++..   .+|+.+++.+|..+
T Consensus       225 ~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          225 GKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence                1234678999999999998643   47999999998754

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=1.4e-23  Score=177.46  Aligned_cols=194  Identities=12%  Similarity=0.075  Sum_probs=138.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +..|++|||||+|+||++++++|+++| ++|++++|+++.++..      ...++.++.+|++++++++++++       
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ-------   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------
Confidence            346899999999999999999999999 8999999998654321      23468999999999999988876       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc---
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ---  167 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~---  167 (299)
                      ++|+||||+|..        .   +           ...++.+++.|++.+       .++||++||.....+.+..   
T Consensus        88 ~~D~vv~~a~~~--------~---~-----------~~~~~~~~~~~~~~~-------~~~iV~iSS~~~~~~~~~~~~~  138 (236)
T 3qvo_A           88 GQDIVYANLTGE--------D---L-----------DIQANSVIAAMKACD-------VKRLIFVLSLGIYDEVPGKFVE  138 (236)
T ss_dssp             TCSEEEEECCST--------T---H-----------HHHHHHHHHHHHHTT-------CCEEEEECCCCC----------
T ss_pred             CCCEEEEcCCCC--------c---h-----------hHHHHHHHHHHHHcC-------CCEEEEEecceecCCCCccccc
Confidence            689999999841        1   1           133567888888875       5899999998876654432   


Q ss_pred             ----------hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHH
Q 022335          168 ----------IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       168 ----------~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                                ..|..+|           ..+. ..||++++|+||++.++.... ...     ........+++.+++|+
T Consensus       139 ~~~~~~~~~~~~~~~~~-----------~~l~-~~gi~~~~vrPg~i~~~~~~~-~~~-----~~~~~~~~~~~i~~~Dv  200 (236)
T 3qvo_A          139 WNNAVIGEPLKPFRRAA-----------DAIE-ASGLEYTILRPAWLTDEDIID-YEL-----TSRNEPFKGTIVSRKSV  200 (236)
T ss_dssp             ------CGGGHHHHHHH-----------HHHH-TSCSEEEEEEECEEECCSCCC-CEE-----ECTTSCCSCSEEEHHHH
T ss_pred             chhhcccchHHHHHHHH-----------HHHH-HCCCCEEEEeCCcccCCCCcc-eEE-----eccCCCCCCcEECHHHH
Confidence                      2333332           2233 669999999999997653221 100     00011123567899999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+++++++++...++ |+.+.++++.+..
T Consensus       201 A~~i~~ll~~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          201 AALITDIIDKPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             HHHHHHHHHSTTTTT-TEEEEEECSSCCC
T ss_pred             HHHHHHHHcCccccc-CeeEEecCCCCCC
Confidence            999999998876655 8888888876654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.91  E-value=1.1e-23  Score=179.36  Aligned_cols=213  Identities=14%  Similarity=0.058  Sum_probs=154.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++++|||||+|+||++++++|+++  |++|++++|+++..+.+       ..++.++.+|+++.++++++++       
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~-------   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ-------   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc-------
Confidence            4789999999999999999999999  89999999998654432       3467789999999999888775       


Q ss_pred             CccEEEEcCCCCCCCCC---------CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           91 KLDILVNAAAGNFLVSA---------EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      ++|+||||||.......         .+...+++++.+++|+.++.++++++.+.    +       .++||++||..+.
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~iv~~SS~~~~  137 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-------VKHIVVVGSMGGT  137 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-------CSEEEEEEETTTT
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-------CCEEEEEcCccCC
Confidence            68999999997542111         11223444567899999999988877532    2       4789999998876


Q ss_pred             ccCCCch-----HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC-CCchHHhHHHHhcCCCCCCCCHH
Q 022335          162 TASWYQI-----HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK-LAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       162 ~~~~~~~-----~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      .+.....     .|+.+|++++.+++        ..|+++++++||++.++..... +.... ......  ....+.+++
T Consensus       138 ~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~i~~~~vrpg~v~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~  206 (253)
T 1xq6_A          138 NPDHPLNKLGNGNILVWKRKAEQYLA--------DSGTPYTIIRAGGLLDKEGGVRELLVGK-DDELLQ--TDTKTVPRA  206 (253)
T ss_dssp             CTTCGGGGGGGCCHHHHHHHHHHHHH--------TSSSCEEEEEECEEECSCSSSSCEEEES-TTGGGG--SSCCEEEHH
T ss_pred             CCCCccccccchhHHHHHHHHHHHHH--------hCCCceEEEecceeecCCcchhhhhccC-CcCCcC--CCCcEEcHH
Confidence            5443332     36779999988764        2489999999999976542211 10000 000111  123468999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      |+|+++++++....  ..|+.+++.++.
T Consensus       207 Dva~~~~~~~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          207 DVAEVCIQALLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             HHHHHHHHHTTCGG--GTTEEEEEEECC
T ss_pred             HHHHHHHHHHcCcc--ccCCEEEecCCC
Confidence            99999999997533  478999998864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.90  E-value=1.6e-22  Score=166.73  Aligned_cols=199  Identities=16%  Similarity=0.109  Sum_probs=148.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++++||||+|+||++++++|+++|++|++++|+++..+..      ...++.++.+|+++++++.++++       ++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence            46899999999999999999999999999999998653211      13468899999999999888765       689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC----CchH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----YQIH  169 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~----~~~~  169 (299)
                      +|||++|.....   +.        .++|+.++..+++++.+    .+       .++||++||.......+    ....
T Consensus        70 ~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~~~----~~-------~~~~v~~Ss~~~~~~~~~~~~~~~~  127 (206)
T 1hdo_A           70 AVIVLLGTRNDL---SP--------TTVMSEGARNIVAAMKA----HG-------VDKVVACTSAFLLWDPTKVPPRLQA  127 (206)
T ss_dssp             EEEECCCCTTCC---SC--------CCHHHHHHHHHHHHHHH----HT-------CCEEEEECCGGGTSCTTCSCGGGHH
T ss_pred             EEEECccCCCCC---Cc--------cchHHHHHHHHHHHHHH----hC-------CCeEEEEeeeeeccCcccccccchh
Confidence            999999965431   11        13777787777776643    33       46899999987665544    5688


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+.+|++++.+.+        ..|+++++++||++...+....+.. .    . ...+.+.+.+++|+|+++++++... 
T Consensus       128 y~~~K~~~e~~~~--------~~~i~~~~lrp~~~~~~~~~~~~~~-~----~-~~~~~~~~i~~~Dva~~~~~~~~~~-  192 (206)
T 1hdo_A          128 VTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYTV-T----L-DGRGPSRVISKHDLGHFMLRCLTTD-  192 (206)
T ss_dssp             HHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCEE-E----S-SSCSSCSEEEHHHHHHHHHHTTSCS-
T ss_pred             HHHHHHHHHHHHH--------hCCCCEEEEeCCcccCCCCCcceEe-c----c-cCCCCCCccCHHHHHHHHHHHhcCc-
Confidence            9999999998873        2379999999999832322211110 0    0 1122146789999999999999764 


Q ss_pred             CCccCcEEEeCCcc
Q 022335          250 KYVNGTTLIVDGGL  263 (299)
Q Consensus       250 ~~~~G~~i~~dgg~  263 (299)
                       ..+|+.++++||+
T Consensus       193 -~~~g~~~~i~~g~  205 (206)
T 1hdo_A          193 -EYDGHSTYPSHQY  205 (206)
T ss_dssp             -TTTTCEEEEECCC
T ss_pred             -cccccceeeeccc
Confidence             3789999999985

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=1.2e-23  Score=225.36  Aligned_cols=178  Identities=17%  Similarity=0.172  Sum_probs=142.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhH---HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQV---LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+...   .++..+++...+.++.++.||+++.++++++++++. .
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            5899999999999999999999999998 7888988543   344556666667889999999999999999999987 4


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +|++|+||||||+....++.+.+.++|++++++|+.|++++.+++.+.|.+         .++||++||..+..+.+++.
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---------~g~iV~iSS~ag~~g~~g~~ 2032 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---------LDYFVIFSSVSCGRGNAGQA 2032 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT---------CCEEEEECCHHHHTTCTTCH
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---------CCEEEEecchhhcCCCCCcH
Confidence            899999999999887788899999999999999999999999999988754         37999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG  205 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~  205 (299)
                      .|+++|+|+++|++.++.+     |+...++..|.+.
T Consensus      2033 ~Y~aaKaal~~l~~~rr~~-----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2033 NYGFANSAMERICEKRRHD-----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHC-----CCcEEEEEccCcC
Confidence            9999999999999976643     6777788777664

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.90  E-value=9.2e-23  Score=182.69  Aligned_cols=232  Identities=15%  Similarity=0.093  Sum_probs=167.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++++++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+. ...++.++.+|+++++++.++++.+     
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            3568999999999999999999999999999999998765444443332 2457889999999999999988865     


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc--------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT--------  162 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~--------  162 (299)
                      ++|+|||+||...    .+.+.++++..+++|+.++.++++++.+.   ..       .++||++||...+.        
T Consensus        80 ~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~-------~~~~v~~SS~~vyg~~~~~~~~  145 (357)
T 1rkx_A           80 QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG-------VKAVVNITSDKCYDNKEWIWGY  145 (357)
T ss_dssp             CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC-------CCEEEEECCGGGBCCCCSSSCB
T ss_pred             CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC-------CCeEEEecCHHHhCCCCcCCCC
Confidence            7999999999532    12234567889999999999999998753   11       36899999986432        


Q ss_pred             ----cCCCchHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEeCCccCCCCCCCCC-CchHHhHHHHhcCC-----
Q 022335          163 ----ASWYQIHVAAAKAAVDAITRNLALEWGA-----DYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMP-----  227 (299)
Q Consensus       163 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~-----~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~-----  227 (299)
                          +......|+.+|++.+.+++.++.++..     ..|+++++++||.+.++...... ....+........+     
T Consensus       146 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~  225 (357)
T 1rkx_A          146 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN  225 (357)
T ss_dssp             CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECC
Confidence                2234678999999999999999988720     23899999999999765432110 01122222221111     


Q ss_pred             ---CCCCCCHHHHHHHHHHHcCCC--CCCccCcEEEeCCc
Q 022335          228 ---LYKLGEKWDIAMAALYLTSDT--GKYVNGTTLIVDGG  262 (299)
Q Consensus       228 ---~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~~dgg  262 (299)
                         ...+...+|+|++++.++...  .....|+.+++.+|
T Consensus       226 ~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          226 PHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             TTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             CCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence               123577899999998887421  11235678887654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=1.5e-23  Score=186.59  Aligned_cols=225  Identities=17%  Similarity=0.096  Sum_probs=157.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |+++++|||||+|+||++++++|+++|++|++++|+.+..+.  +.+...  ..++.++.+|+++.++++++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            357899999999999999999999999999999998754321  122222  246889999999999999998866    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc--------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY--------  161 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~--------  161 (299)
                       ++|+||||||....    +.+.++++..+++|+.++.++++++.+.   ..       .++||++||...+        
T Consensus        75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~-------~~~iv~~SS~~vyg~~~~~~~  139 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV---KP-------DTKFYQASTSEMFGKVQEIPQ  139 (345)
T ss_dssp             -CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CT-------TCEEEEEEEGGGGCSCSSSSB
T ss_pred             -CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CC-------CceEEEEechhhcCCCCCCCC
Confidence             79999999996531    1123457889999999999999998742   11       2789999998543        


Q ss_pred             ---ccCCCchHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc----------C
Q 022335          162 ---TASWYQIHVAAAKAAVDAITRNLALEWGA--DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY----------M  226 (299)
Q Consensus       162 ---~~~~~~~~Y~~sKaal~~l~~~la~e~~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~----------~  226 (299)
                         .+......|+.+|++.+.+++.++.+++-  ..++.++.+.||...+... ..+  ..........          .
T Consensus       140 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~  216 (345)
T 2z1m_A          140 TEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVT-RKI--TYSLARIKYGLQDKLVLGNLN  216 (345)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHH-HHH--HHHHHHHHTTSCSCEEESCTT
T ss_pred             CccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchh-HHH--HHHHHHHHcCCCCeeeeCCCC
Confidence               23345678999999999999999988731  1245667777886643210 000  0011111110          0


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          227 PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       227 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      ....+..++|+|++++++++...    ++.+++.+|..
T Consensus       217 ~~~~~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  250 (345)
T 2z1m_A          217 AKRDWGYAPEYVEAMWLMMQQPE----PDDYVIATGET  250 (345)
T ss_dssp             CEECCEEHHHHHHHHHHHHTSSS----CCCEEECCSCC
T ss_pred             ceeeeEEHHHHHHHHHHHHhCCC----CceEEEeCCCC
Confidence            11237889999999999997542    35666665543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.89  E-value=3.8e-23  Score=185.64  Aligned_cols=221  Identities=14%  Similarity=0.068  Sum_probs=152.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH--cCCeEEEEeCChhHHHHH-------HHHHHhcCCcEEEEEcCCCCHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGK--HGASVAIMGRRKQVLDAA-------VSALRSLGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~--~G~~Vv~~~r~~~~~~~~-------~~~~~~~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .+++++||||||+|+||++++++|++  +|++|++++|+.......       .......+.++.++.+|++++++++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            46799999999999999999999999  999999999976421100       000111234678999999999998886


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                            ...++|+|||+||....      +.++++..+++|+.++.++++++..    .        +++||++||...+
T Consensus        87 ------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~--------~~~~V~~SS~~vy  142 (362)
T 3sxp_A           87 ------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----K--------KAKVIYASSAGVY  142 (362)
T ss_dssp             ------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----T--------TCEEEEEEEGGGG
T ss_pred             ------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----c--------CCcEEEeCcHHHh
Confidence                  24589999999995432      3355778999999999999998842    2        3569999996544


Q ss_pred             ccCC----------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHHhcC-
Q 022335          162 TASW----------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYM-  226 (299)
Q Consensus       162 ~~~~----------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~-  226 (299)
                      ....          ....|+.+|++.+.+++.++.+      +++..++|+.+..+.....    .....+........ 
T Consensus       143 g~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  216 (362)
T 3sxp_A          143 GNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND------NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKE  216 (362)
T ss_dssp             CSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT------SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSE
T ss_pred             CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc------CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCC
Confidence            3221          2346999999999998876643      5667777766654432111    00112222222211 


Q ss_pred             --------CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 --------PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 --------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                              ....+..++|+|+++++++....   +| .+++.+|..+
T Consensus       217 ~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          217 VKLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             EECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             eEEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence                    12235679999999999997543   67 8999887653

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.89  E-value=1.8e-22  Score=179.43  Aligned_cols=210  Identities=11%  Similarity=0.046  Sum_probs=153.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+++|||||+|+||++++++|+++|++|++++|+.+..+.+    ..  .++.++.+|+++.+++.++++       ++|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            34899999999999999999999999999999987643321    11  257889999999999887765       699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-------  166 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-------  166 (299)
                      +|||+||...      ...+++++.+++|+.++.++++++.+.    +       .++||++||...+.+.+.       
T Consensus        80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~~v~~SS~~~~~~~~~~~~~~E~  142 (342)
T 2x4g_A           80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----R-------VPRILYVGSAYAMPRHPQGLPGHEG  142 (342)
T ss_dssp             EEEEC------------------CHHHHHHHHHHHHHHHHHHH----T-------CSCEEEECCGGGSCCCTTSSCBCTT
T ss_pred             EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-------CCeEEEECCHHhhCcCCCCCCCCCC
Confidence            9999999642      233567788999999999999998764    2       368999999887654443       


Q ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC-CCCCCchHHhHHHHhcCCC------CC
Q 022335          167 ---------QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG-MNKLAPDEINSKARDYMPL------YK  230 (299)
Q Consensus       167 ---------~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~-~~~~~~~~~~~~~~~~~~~------~~  230 (299)
                               ...|+.+|++.+.+++.++.    . |+++++++||.+.++.. ...  ............+.      ..
T Consensus       143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~----~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  215 (342)
T 2x4g_A          143 LFYDSLPSGKSSYVLCKWALDEQAREQAR----N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRN  215 (342)
T ss_dssp             CCCSSCCTTSCHHHHHHHHHHHHHHHHHH----T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEE
T ss_pred             CCCCccccccChHHHHHHHHHHHHHHHhh----c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcc
Confidence                     67899999999999998874    4 79999999999976543 211  12222332222211      12


Q ss_pred             CCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       231 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +..++|+|+++++++....   .|+.+++.++.
T Consensus       216 ~i~v~Dva~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          216 VIDAAEAGRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             EEEHHHHHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             eeeHHHHHHHHHHHHhCCC---CCceEEEcCCc
Confidence            5789999999999986543   28999999986

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.89  E-value=1.5e-21  Score=177.58  Aligned_cols=229  Identities=13%  Similarity=0.085  Sum_probs=159.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHH-----------------HHHHHHHhcCCcEEEEEcCCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD-----------------AAVSALRSLGIKAVGFEGDVR   73 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~-----------------~~~~~~~~~~~~v~~~~~Dl~   73 (299)
                      ..++.++|||||+|.||.+++++|+++|++|++++|+.....                 .+.+.....+.++.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            456889999999999999999999999999999998754321                 111111122457889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSIL  153 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv  153 (299)
                      +.++++++++..     ++|+|||+||....... ..+.+++...+++|+.++.++++++.+.    ..      ..+||
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~------~~~~V  151 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GE------ECHLV  151 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CT------TCEEE
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----CC------CcEEE
Confidence            999999988765     69999999996532211 1255667789999999999999988653    10      24899


Q ss_pred             Eeccccccc------------------------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC
Q 022335          154 NISATLHYT------------------------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG  209 (299)
Q Consensus       154 ~vsS~~~~~------------------------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~  209 (299)
                      ++||...+.                        +......|+.||++.+.+++.++.++    |+++++++||.+.++..
T Consensus       152 ~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          152 KLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             EECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSCC
T ss_pred             EeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc----CCeEEEEecceeeCCCC
Confidence            999976442                        22335689999999999999988776    69999999999976543


Q ss_pred             CC-----------------CCCchHHhHHHHhcCC---------CCCCCCHHHHHHHHHHHcCCCCCCccC--cEEEeCC
Q 022335          210 MN-----------------KLAPDEINSKARDYMP---------LYKLGEKWDIAMAALYLTSDTGKYVNG--TTLIVDG  261 (299)
Q Consensus       210 ~~-----------------~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G--~~i~~dg  261 (299)
                      ..                 ......+........+         ...+...+|+|++++.++....  ..|  +.+++.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          228 DETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             TTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             CccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence            21                 0001122222222211         1234679999999998885432  245  6777754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.89  E-value=1.1e-22  Score=186.80  Aligned_cols=220  Identities=10%  Similarity=-0.032  Sum_probs=159.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHHHh---------cCCcEEEEEcCCCCHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ---VLDAAVSALRS---------LGIKAVGFEGDVRRQEHA   78 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~---~~~~~~~~~~~---------~~~~v~~~~~Dl~~~~~v   78 (299)
                      ...+++||||||+|+||++++++|+++|++|++++|+.+   ..+.+.+.+..         ...++.++.+|+++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            456889999999999999999999999999999999876   33444443322         235799999999998887


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                      .        .++++|+||||||...       ..++++..+++|+.++.++++++.+     .       ..+||++||.
T Consensus       146 ~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~-------~~~~v~~SS~  198 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-------HARLIYVSTI  198 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----T-------TCEEEEEEEG
T ss_pred             C--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----c-------CCcEEEECch
Confidence            7        4579999999999653       2245778899999999999999876     2       4789999998


Q ss_pred             cc--c----------------ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-----
Q 022335          159 LH--Y----------------TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-----  215 (299)
Q Consensus       159 ~~--~----------------~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-----  215 (299)
                      ..  .                .+......|+.+|++.+.+++.++.     .|+++++++||.+.++........     
T Consensus       199 ~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~  273 (427)
T 4f6c_A          199 SVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVGNLTSPYNGRWHMRNIKTN  273 (427)
T ss_dssp             GGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-----TTCCEEEEEECCEESCSSSCCCCTTGGGC
T ss_pred             HhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH-----cCCCEEEEeCCeeecCCCCCccccCcchH
Confidence            76  0                0122567899999999999987652     489999999999976654333211     


Q ss_pred             --hHHhHHHHhcC--------CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          216 --DEINSKARDYM--------PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       216 --~~~~~~~~~~~--------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                        ...........        ....+...+|+|+++++++....   .|+.+++.+|..+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          274 RFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             HHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             HHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence              12222222211        22346788999999999997544   8899999987654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.89  E-value=9.4e-23  Score=181.86  Aligned_cols=219  Identities=18%  Similarity=0.130  Sum_probs=160.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           15 KVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQV-LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++|||||+|+||++++++|+++  |++|++++|+... .....+++  ...++.++.+|+++.++++++++       +
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            58999999999999999999999  8999999986421 01111111  12468999999999999888776       5


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---------  162 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---------  162 (299)
                      +|+|||+||....    +.+.++++..+++|+.++.++++++.+.            +++||++||...+.         
T Consensus        76 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~------------~~~~v~~SS~~vyg~~~~~~~~~  139 (348)
T 1oc2_A           76 ADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY------------DIRFHHVSTDEVYGDLPLREDLP  139 (348)
T ss_dssp             CSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------------TCEEEEEEEGGGGCCBCCGGGST
T ss_pred             CCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh------------CCeEEEecccceeCCCccccccc
Confidence            6999999996531    1223456788999999999999999865            24899999976432         


Q ss_pred             --------------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC--
Q 022335          163 --------------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM--  226 (299)
Q Consensus       163 --------------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~--  226 (299)
                                    +......|+.+|++.+.+++.++.++    |+++++++||.+.++...................  
T Consensus       140 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  215 (348)
T 1oc2_A          140 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKP  215 (348)
T ss_dssp             TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCC
T ss_pred             ccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCc
Confidence                          22345789999999999999998876    6999999999997654321111112222222211  


Q ss_pred             -------CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 -------PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 -------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                             ....+..++|+|+++++++...   .+|+.+++.+|..+
T Consensus       216 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          216 KLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             EEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             eEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence                   1234678999999999988643   47999999988654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.89  E-value=2.3e-22  Score=179.29  Aligned_cols=226  Identities=15%  Similarity=0.063  Sum_probs=158.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+++++||||||+|+||.+++++|+++|  ++|++++|.....  ....+...  ..++.++.+|+++.++++++++.. 
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-
Confidence            3568999999999999999999999999  6777777754210  01111111  247999999999999999998864 


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-  165 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-  165 (299)
                          ++|+|||+||.....    ...++++..+++|+.++.++++++...    +       .++||++||...+...+ 
T Consensus        98 ----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-------~~~~v~~SS~~vy~~~~~  158 (346)
T 4egb_A           98 ----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----P-------HIKLVQVSTDEVYGSLGK  158 (346)
T ss_dssp             ----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----T-------TSEEEEEEEGGGGCCCCS
T ss_pred             ----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C-------CCEEEEeCchHHhCCCCc
Confidence                699999999975432    234566788999999999998887542    2       46899999976554321 


Q ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC------
Q 022335          166 -----------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL------  228 (299)
Q Consensus       166 -----------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~------  228 (299)
                                 ....|+.+|.+.+.+++.++.++    |+++++++||.+.++..........+........+.      
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY----QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDG  234 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTS
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCC
Confidence                       24789999999999999998775    699999999999765432221122233333322222      


Q ss_pred             ---CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 ---YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ---~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                         ..+..++|+|+++++++....   .|+.+++.++..+
T Consensus       235 ~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          235 LNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence               123568999999999986543   7899999988754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.89  E-value=5.8e-22  Score=176.99  Aligned_cols=228  Identities=14%  Similarity=0.029  Sum_probs=168.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-----CcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-----IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .++++++|||||+|+||++++++|+++|++|++++|+..........+....     .++.++.+|+++.+++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            3568999999999999999999999999999999997654444444443321     579999999999999888776  


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                           ++|+|||+||....    ....+++...+++|+.++.++++++...    +       ..+||++||...+....
T Consensus       100 -----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-------~~~~v~~SS~~vyg~~~  159 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA----Q-------VQSFTYAASSSTYGDHP  159 (351)
T ss_dssp             -----TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-------CSEEEEEEEGGGGTTCC
T ss_pred             -----CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-------CCEEEEEecHHhcCCCC
Confidence                 79999999996432    1234556788999999999998887532    2       36899999987654332


Q ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC----chHHhHHHHhcCCC--
Q 022335          166 -----------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA----PDEINSKARDYMPL--  228 (299)
Q Consensus       166 -----------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~--  228 (299)
                                 ....|+.+|.+.+.+++.++.++    |+++++++|+.+.++.......    ...+........+.  
T Consensus       160 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (351)
T 3ruf_A          160 ALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY----GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYI  235 (351)
T ss_dssp             CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred             CCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEE
Confidence                       24689999999999999998776    6999999999997654322211    12222223222221  


Q ss_pred             -------CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 -------YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 -------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                             ..+...+|+|++++.++... ....|+.+++.+|..+
T Consensus       236 ~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          236 NGDGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             ESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence                   23567999999999888542 3467899999887643

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.89  E-value=1.6e-22  Score=179.69  Aligned_cols=214  Identities=13%  Similarity=0.064  Sum_probs=149.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL---GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++++|||||+|+||.+++++|+++|++|+++.|+.+..+.... +...   ..++.++.+|+++.++++++++      
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            48899999999999999999999999999999998764333221 1111   1258889999999998887765      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----  164 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----  164 (299)
                       ++|+|||+|+...   ....  +..++.+++|+.++.++++++.+..   .       .++||++||..+..+.     
T Consensus        77 -~~d~Vih~A~~~~---~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~-------~~riV~~SS~~~~~~~~~~~~  140 (337)
T 2c29_D           77 -GCTGVFHVATPMD---FESK--DPENEVIKPTIEGMLGIMKSCAAAK---T-------VRRLVFTSSAGTVNIQEHQLP  140 (337)
T ss_dssp             -TCSEEEECCCCCC---SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---C-------CCEEEEECCGGGTSCSSSCCS
T ss_pred             -CCCEEEEeccccC---CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---C-------ccEEEEeeeHhhcccCCCCCc
Confidence             6899999998541   1111  2235689999999999999887642   1       3689999998754321     


Q ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHH---H--
Q 022335          165 -----------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK---A--  222 (299)
Q Consensus       165 -----------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~---~--  222 (299)
                                       +....|+.||++.+.+++.++.++    |+++++++||.+.++.....+. ......   .  
T Consensus       141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g  215 (337)
T 2c29_D          141 VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN----NIDFITIIPTLVVGPFIMSSMP-PSLITALSPITG  215 (337)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHT
T ss_pred             ccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcC
Confidence                             123469999999999887776543    7999999999997664333222 111110   0  


Q ss_pred             ----HhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcE
Q 022335          223 ----RDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTT  256 (299)
Q Consensus       223 ----~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  256 (299)
                          ....+..++..++|+|+++++++...  ...|.+
T Consensus       216 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~  251 (337)
T 2c29_D          216 NEAHYSIIRQGQFVHLDDLCNAHIYLFENP--KAEGRY  251 (337)
T ss_dssp             CGGGHHHHTEEEEEEHHHHHHHHHHHHHCT--TCCEEE
T ss_pred             CCccccccCCCCEEEHHHHHHHHHHHhcCc--ccCceE
Confidence                00012234789999999999988542  234544

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.89  E-value=2.9e-22  Score=177.95  Aligned_cols=216  Identities=14%  Similarity=0.032  Sum_probs=150.3

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ...++++++|||||+|+||++++++|+++|++|++++|+.......   +... .++.++.+|+++.++++++++.    
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~~~~~----   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQLIGD----   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHHHHHH----
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHHHHhc----
Confidence            3456789999999999999999999999999999999975321110   1111 4688999999999999988875    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----cC
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----AS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----~~  164 (299)
                       +++|+|||+||.....     +.++++  +++|+.++.++++++.+.    +       .++||++||...+.    ..
T Consensus        88 -~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~-------~~~iV~~SS~~~~g~~~~~~  148 (333)
T 2q1w_A           88 -LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKKN----N-------VGRFVYFQTALCYGVKPIQQ  148 (333)
T ss_dssp             -HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT----T-------CSEEEEEEEGGGGCSCCCSS
T ss_pred             -cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHHh----C-------CCEEEEECcHHHhCCCcccC
Confidence             2799999999975432     224444  999999999999998752    2       47999999977653    21


Q ss_pred             --------CCc-hHHHHHHHHHHHHHHH-HHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh------cCCC
Q 022335          165 --------WYQ-IHVAAAKAAVDAITRN-LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD------YMPL  228 (299)
Q Consensus       165 --------~~~-~~Y~~sKaal~~l~~~-la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~  228 (299)
                              ... ..|+.+|++.+.+++. ++         ++..++|+.+..+...... ...+......      ..+.
T Consensus       149 ~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~---------~~~ilR~~~v~gp~~~~~~-~~~~~~~~~~~~~~~~~~~~  218 (333)
T 2q1w_A          149 PVRLDHPRNPANSSYAISKSANEDYLEYSGL---------DFVTFRLANVVGPRNVSGP-LPIFFQRLSEGKKCFVTKAR  218 (333)
T ss_dssp             SBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC---------CEEEEEESEEESTTCCSSH-HHHHHHHHHTTCCCEEEECE
T ss_pred             CCCcCCCCCCCCCchHHHHHHHHHHHHhhhC---------CeEEEeeceEECcCCcCcH-HHHHHHHHHcCCeeeCCCce
Confidence                    123 7899999999998876 43         4556677666443310011 1112222111      1123


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..+..++|+|+++++++....    |+.+++.+|..+
T Consensus       219 ~~~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          219 RDFVFVKDLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             ECEEEHHHHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             EeeEEHHHHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            456789999999999997543    899999887654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.88  E-value=2.7e-22  Score=176.33  Aligned_cols=215  Identities=14%  Similarity=0.067  Sum_probs=155.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|+||++++++|+++|++|++++|.......      ....++.++.+|+++++++++++++.     ++|+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v   70 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPTHV   70 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999999999985421100      11235778899999999998887752     79999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc------------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA------------  163 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~------------  163 (299)
                      ||+|+....    ..+.++++..+++|+.++.++++++..    ..       .++||++||..+..+            
T Consensus        71 i~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~-------~~~iv~~SS~~~~~g~~~~~~~~~E~~  135 (311)
T 2p5y_A           71 SHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG-------VEKLVFASTGGAIYGEVPEGERAEETW  135 (311)
T ss_dssp             EECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-------CSEEEEEEEHHHHHCCCCTTCCBCTTS
T ss_pred             EECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC-------CCEEEEeCCChhhcCCCCCCCCcCCCC
Confidence            999986432    123456788999999999999988752    22       468999999822111            


Q ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---hHHhHHHHhcC-------------
Q 022335          164 -SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---DEINSKARDYM-------------  226 (299)
Q Consensus       164 -~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~-------------  226 (299)
                       ......|+.||++.+.+++.++.++    |+++++++||.+.++........   ..+........             
T Consensus       136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  211 (311)
T 2p5y_A          136 PPRPKSPYAASKAAFEHYLSVYGQSY----GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDE  211 (311)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHc----CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCC
Confidence             1235689999999999999998775    69999999999976543221111   11122221111             


Q ss_pred             -CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 -PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                       ....+..++|+|+++++++...     |+.+++.+|..+
T Consensus       212 ~~~~~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          212 GCVRDYVYVGDVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             CeEEeeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence             1224567999999999988542     889999887654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=3.7e-21  Score=174.59  Aligned_cols=171  Identities=18%  Similarity=0.119  Sum_probs=133.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHH-HcCCeEEEEeCChhH---------HHHHHHHHHhcC-----Cc---EEEEEcCCCCH
Q 022335           14 GKVALITGGGSGIGFEISTQFG-KHGASVAIMGRRKQV---------LDAAVSALRSLG-----IK---AVGFEGDVRRQ   75 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la-~~G~~Vv~~~r~~~~---------~~~~~~~~~~~~-----~~---v~~~~~Dl~~~   75 (299)
                      ++++|||||+|+||.+++++|+ ++|++|++++|+...         .+.+.+.+....     .+   +.++.+|+++.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999987643         344433343331     24   88999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      +++++++++    ++++|+|||+||.....    .+.++++..+++|+.++.++++++.    +.+       .++||++
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-------~~~iv~~  142 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAML----LHK-------CDKIIFS  142 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-------CCEEEEE
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHH----HhC-------CCEEEEE
Confidence            998887763    55699999999965321    1345678899999999999998754    222       4789999


Q ss_pred             ccccccccCC------------------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          156 SATLHYTASW------------------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       156 sS~~~~~~~~------------------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                      ||...+....                  ....|+.+|++.+.+++.++.++    |+++++++|+.+..+
T Consensus       143 SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilRp~~v~G~  208 (397)
T 1gy8_A          143 SSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNACGA  208 (397)
T ss_dssp             EEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECC
T ss_pred             CCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH----CCcEEEEeccceeCC
Confidence            9976543221                  25789999999999999999886    699999999998655

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.88  E-value=4.2e-22  Score=179.87  Aligned_cols=222  Identities=11%  Similarity=-0.008  Sum_probs=159.1

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ...++++++|||||+|+||++++++|+++| ++|++++|+......   .+. ...++.++.+|++++++++++++    
T Consensus        27 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             hHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh----
Confidence            345778999999999999999999999999 999999998643211   010 13568999999999998777654    


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCCCCCCceEEEeccccccc----
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKG-GPGRSSAGGGSILNISATLHYT----  162 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~-~~~~~~~~~g~iv~vsS~~~~~----  162 (299)
                         ++|+|||+||.....    .+.+++++.+++|+.++.++++++.    +. .       .++||++||...+.    
T Consensus        99 ---~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~-------~~~~V~~SS~~vyg~~~~  160 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLK----HFKR-------LKKVVYSAAGCSIAEKTF  160 (377)
T ss_dssp             ---CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHT----TCSS-------CCEEEEEEEC--------
T ss_pred             ---CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-------CCeEEEeCCHHHcCCCCC
Confidence               899999999964321    1234577899999999999988873    22 2       46899999975321    


Q ss_pred             ------------cC-CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC---------CC----CCCch
Q 022335          163 ------------AS-WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG---------MN----KLAPD  216 (299)
Q Consensus       163 ------------~~-~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~---------~~----~~~~~  216 (299)
                                  +. .....|+.+|++.+.+++.++.++    |+++++++||.+.++..         ..    .....
T Consensus       161 ~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  236 (377)
T 2q1s_A          161 DDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH----QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTP  236 (377)
T ss_dssp             ------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHH
T ss_pred             CCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCCcccccccccCcccccccHHH
Confidence                        22 345689999999999999988765    69999999999976543         11    01111


Q ss_pred             HHhHHHHhcCCC---------CCCCCHHHHHHH-HHHHcCCCCCCccCcEEEeCCccc
Q 022335          217 EINSKARDYMPL---------YKLGEKWDIAMA-ALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       217 ~~~~~~~~~~~~---------~~~~~~~dva~~-~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      .+........+.         ..+..++|+|++ ++.++....   +| .+++.+|..
T Consensus       237 ~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~  290 (377)
T 2q1s_A          237 TFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKE  290 (377)
T ss_dssp             HHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCC
T ss_pred             HHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCc
Confidence            222223222222         234568999999 999886532   68 888888754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.88  E-value=9.5e-23  Score=179.11  Aligned_cols=216  Identities=16%  Similarity=0.039  Sum_probs=158.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +++|||||+|+||++++++|+++|++|++++|+.+.....      ...++.++.+|+++.+ +.+.++       . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C-CE
Confidence            4799999999999999999999999999999976532221      1456889999999987 655443       3 99


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----------  163 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  163 (299)
                      |||+|+....    ..+.++++..+++|+.++.++++++...    +       .++||++||...+..           
T Consensus        66 vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~~~iv~~SS~~vyg~~~~~~~~e~~~  130 (312)
T 3ko8_A           66 VFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQT----G-------VRTVVFASSSTVYGDADVIPTPEEEP  130 (312)
T ss_dssp             EEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHHH----T-------CCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             EEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-------CCEEEEeCcHHHhCCCCCCCCCCCCC
Confidence            9999995432    2344567788999999999999988432    2       468999999776532           


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc-C---------CCCCCCC
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-M---------PLYKLGE  233 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~  233 (299)
                      ......|+.+|++.+.+++.++.++    |+++++++||.+.++....... .......... .         ....+..
T Consensus       131 ~~p~~~Y~~sK~~~e~~~~~~~~~~----g~~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~  205 (312)
T 3ko8_A          131 YKPISVYGAAKAAGEVMCATYARLF----GVRCLAVRYANVVGPRLRHGVI-YDFIMKLRRNPNVLEVLGDGTQRKSYLY  205 (312)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCSSHH-HHHHHHHHHCTTEEEEC----CEECEEE
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccccCcCCCCChH-HHHHHHHHhCCCCeEEcCCCCeEEeeEE
Confidence            2346789999999999999999886    6999999999997664332211 1222222211 1         1123566


Q ss_pred             HHHHHHHHHHHcCC-CCCCccCcEEEeCCcccc
Q 022335          234 KWDIAMAALYLTSD-TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       234 ~~dva~~~~~l~s~-~~~~~~G~~i~~dgg~~~  265 (299)
                      ++|+|+++++++.. ......|+.+++.+|..+
T Consensus       206 v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          206 VRDAVEATLAAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHHHHHHHHHHHhccccCCCCcEEEEcCCCce
Confidence            99999999999864 123457889999887654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=1.2e-21  Score=174.60  Aligned_cols=217  Identities=12%  Similarity=0.062  Sum_probs=155.0

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+...+++|+||||||+|+||.+++++|+++|++|++++|+.+.            .++.++.+|+++.+++.++++   
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh---
Confidence            34456789999999999999999999999999999999998753            457889999999999888776   


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---  163 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---  163 (299)
                          ++|+|||+|+....      +..+++..+++|+.++.++++++..    .+       .++||++||...+..   
T Consensus        77 ----~~d~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~~~----~~-------~~~~V~~SS~~vyg~~~~  135 (347)
T 4id9_A           77 ----GVSAVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAASA----AG-------VRRFVFASSGEVYPENRP  135 (347)
T ss_dssp             ----TCSEEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHHHH----TT-------CSEEEEEEEGGGTTTTSC
T ss_pred             ----CCCEEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHHHH----cC-------CCeEEEECCHHHhCCCCC
Confidence                79999999986532      3345588999999999999888753    22       468999999654432   


Q ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---CC--Cc-------------
Q 022335          164 ----------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---KL--AP-------------  215 (299)
Q Consensus       164 ----------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---~~--~~-------------  215 (299)
                                ......|+.+|.+.+.+++.++.++    |+++++++|+.+.+.....   .+  .+             
T Consensus       136 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~  211 (347)
T 4id9_A          136 EFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG----AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQN  211 (347)
T ss_dssp             SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHH
T ss_pred             CCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc----CCceEEEccceEeecccccccccccCCCCcccccccccccc
Confidence                      2346789999999999999888764    7999999999886211000   00  00             


Q ss_pred             --hHH----hHHHHhcCC---------CCCC----CCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          216 --DEI----NSKARDYMP---------LYKL----GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       216 --~~~----~~~~~~~~~---------~~~~----~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                        ...    ........+         ...+    ..++|+|++++.++....  ..|+.+++.+|..+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          212 FGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             HTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             cchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence              011    111111111         1234    778999999999996542  45889999887644

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.88  E-value=8.7e-22  Score=177.96  Aligned_cols=218  Identities=18%  Similarity=0.073  Sum_probs=159.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++++|||||+|+||++++++|+++|++|++++|+.......      ...++.++.+|+++.++++++++       ++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE-------GV   94 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC-------CC
Confidence            578999999999999999999999999999999986532211      12357889999999999888775       79


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----------  162 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----------  162 (299)
                      |+|||+||......+   ..+++++.+++|+.++.++++++..    ..       .++||++||...+.          
T Consensus        95 d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-------~~~~V~~SS~~v~~~~~~~~~~~~  160 (379)
T 2c5a_A           95 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARI----NG-------IKRFFYASSACIYPEFKQLETTNV  160 (379)
T ss_dssp             SEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TT-------CSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred             CEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHH----cC-------CCEEEEEeehheeCCCCCCCccCC
Confidence            999999996532111   0234678899999999999998853    22       46899999976543          


Q ss_pred             --------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----CchHHhHHHHhcCC---
Q 022335          163 --------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----APDEINSKARDYMP---  227 (299)
Q Consensus       163 --------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~---  227 (299)
                              +......|+.+|++.+.+++.++.++    |+++++++||.+.++......    ....+........+   
T Consensus       161 ~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (379)
T 2c5a_A          161 SLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE  236 (379)
T ss_dssp             EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEE
T ss_pred             CcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH----CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceE
Confidence                    22335689999999999999988765    699999999999765432211    11122222222111   


Q ss_pred             -------CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 -------LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 -------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                             ...+..++|+|++++.++...    .|+.+++.++..+
T Consensus       237 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          237 MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             EESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EeCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence                   234677999999999998643    4677888877543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.88  E-value=2.3e-21  Score=175.16  Aligned_cols=228  Identities=14%  Similarity=0.029  Sum_probs=157.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-----LDAAVSALRSLGI-KAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     ++.+..++...+. ++.++.+|+++.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997643     2222222221223 6889999999999999988865   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc------
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT------  162 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~------  162 (299)
                        ++|+|||+||....    ..+.++++..+++|+.++.++++++.+.+.++..      .++||++||...+.      
T Consensus       106 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~------~~~~v~~SS~~vyg~~~~~~  173 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR------TVKYYQAGSSEMFGSTPPPQ  173 (381)
T ss_dssp             --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC------CCEEEEEEEGGGGTTSCSSB
T ss_pred             --CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC------ccEEEEeCcHHHhCCCCCCC
Confidence              79999999996432    1234567889999999999999999998765321      36999999987543      


Q ss_pred             ----cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---hHHhHHHHhc----------
Q 022335          163 ----ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---DEINSKARDY----------  225 (299)
Q Consensus       163 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~----------  225 (299)
                          +......|+.+|++.+.+++.++.+++    +.+..+.|..+..+........   ..........          
T Consensus       174 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  249 (381)
T 1n7h_A          174 SETTPFHPRSPYAASKCAAHWYTVNYREAYG----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNL  249 (381)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCT
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHHHhC----CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCC
Confidence                223467899999999999999998763    4444444433322211111100   0111111111          


Q ss_pred             CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          226 MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       226 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .....+..++|+|+++++++....    ++.+++.+|..+
T Consensus       250 ~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          250 QASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             TCEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             CceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence            112246789999999999986532    477888877654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.88  E-value=6.4e-22  Score=174.05  Aligned_cols=213  Identities=13%  Similarity=0.070  Sum_probs=152.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +++|||||+|+||++++++|+++|..|++..++....+       .....+.++.+|+++ +++.++++       ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-------~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-------FVNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-------GSCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-------hcCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            47999999999999999999999944444444432211       124468999999999 88777765       7999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----------c
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----------A  163 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----------~  163 (299)
                      |||+|+....    ..+.+++++.+++|+.++.++++++.    +.+       .++||++||...+.           +
T Consensus        67 vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-------~~~iv~~SS~~vyg~~~~~~~~E~~~  131 (313)
T 3ehe_A           67 VWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAMR----KAG-------VSRIVFTSTSTVYGEAKVIPTPEDYP  131 (313)
T ss_dssp             EEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHHH----HHT-------CCEEEEECCGGGGCSCSSSSBCTTSC
T ss_pred             EEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHHH----HcC-------CCeEEEeCchHHhCcCCCCCCCCCCC
Confidence            9999985322    23445678899999999999988754    333       47899999977652           3


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc----------CCCCCCCC
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY----------MPLYKLGE  233 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~----------~~~~~~~~  233 (299)
                      ......|+.+|++.+.+++.++.++    |+++++++|+.+.++....... ..........          .....+..
T Consensus       132 ~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~  206 (313)
T 3ehe_A          132 THPISLYGASKLACEALIESYCHTF----DMQAWIYRFANVIGRRSTHGVI-YDFIMKLKRNPEELEILGNGEQNKSYIY  206 (313)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEECSCEESTTCCCSHH-HHHHHHHHHCTTEEEESTTSCCEECCEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccccCcCCCcChH-HHHHHHHHcCCCceEEeCCCCeEEeEEE
Confidence            3346789999999999999999875    6999999999997653322111 1122221111          11234678


Q ss_pred             HHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          234 KWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       234 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++|+|+++++++.+   ...|+.+++.+|..+
T Consensus       207 v~Dva~a~~~~~~~---~~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          207 ISDCVDAMLFGLRG---DERVNIFNIGSEDQI  235 (313)
T ss_dssp             HHHHHHHHHHHTTC---CSSEEEEECCCSCCE
T ss_pred             HHHHHHHHHHHhcc---CCCCceEEECCCCCe
Confidence            99999999999972   346889998887654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.88  E-value=1.9e-21  Score=173.35  Aligned_cols=228  Identities=12%  Similarity=0.031  Sum_probs=158.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH------HHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV------LDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~------~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ++++|||||+|+||.+++++|+++|++|++++|+...      .+...+++.. .+.++.++.+|+++.+++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            5789999999999999999999999999999885432      1222233332 2457889999999999988887752 


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---  163 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---  163 (299)
                          ++|+|||+||.....    ...+++++.+++|+.++.++++++.    +.+       .++||++||...+..   
T Consensus        81 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-------~~~iv~~SS~~~~g~~~~  141 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMK----AHG-------VKNLVFSSSATVYGNPQY  141 (348)
T ss_dssp             ----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-------CCEEEEEEEGGGGCSCSS
T ss_pred             ----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHH----HhC-------CCEEEEECcHHHhCCCCC
Confidence                799999999965321    1235577899999999999988653    332       478999999766432   


Q ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC---C-C-----C-CchHHhHHHH-
Q 022335          164 ---------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM---N-K-----L-APDEINSKAR-  223 (299)
Q Consensus       164 ---------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~---~-~-----~-~~~~~~~~~~-  223 (299)
                               .+....|+.+|++.+.+++.++.+ +  .++++.+++|+.+..+...   . .     . .......... 
T Consensus       142 ~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~  218 (348)
T 1ek6_A          142 LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D--KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIG  218 (348)
T ss_dssp             SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C--TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHT
T ss_pred             CCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C--CCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHh
Confidence                     122678999999999999999876 3  3799999999888654210   0 0     0 0011112111 


Q ss_pred             hcC---------------CCCCCCCHHHHHHHHHHHcCCCCCCccC-cEEEeCCcccc
Q 022335          224 DYM---------------PLYKLGEKWDIAMAALYLTSDTGKYVNG-TTLIVDGGLWL  265 (299)
Q Consensus       224 ~~~---------------~~~~~~~~~dva~~~~~l~s~~~~~~~G-~~i~~dgg~~~  265 (299)
                      ...               ....+...+|+|++++.++..... ..| +.+++.++..+
T Consensus       219 ~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          219 RREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGY  275 (348)
T ss_dssp             SSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-TCCEEEEEECCSCCE
T ss_pred             cCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc-cCCceEEEeCCCCCc
Confidence            111               112356789999999988853211 234 88888776543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.88  E-value=8.4e-22  Score=174.97  Aligned_cols=219  Identities=18%  Similarity=0.133  Sum_probs=158.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---C---CeEEEEeCChhH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKH---G---ASVAIMGRRKQV--LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~---G---~~Vv~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ++|||||+|+||++++++|+++   |   ++|++++|+...  .+.+ +.+. .+.++.++.+|+++.+++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            6999999999999999999997   8   999999986421  1111 1111 1357899999999999888776     


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----  162 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----  162 (299)
                        .++|+|||+||....    +.+.+++++.+++|+.++.++++++.+.    .       .++||++||...+.     
T Consensus        75 --~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~-------~~~~v~~SS~~vyg~~~~~  137 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-------VGRVVHVSTNQVYGSIDSG  137 (337)
T ss_dssp             --TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-------CCEEEEEEEGGGGCCCSSS
T ss_pred             --cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-------CCEEEEecchHHhCCCCCC
Confidence              489999999996431    1123456788999999999999988764    1       36899999975432     


Q ss_pred             ------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCC---------
Q 022335          163 ------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP---------  227 (299)
Q Consensus       163 ------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------  227 (299)
                            +......|+.+|++.+.+++.++.++    |+++++++||.+.++...................+         
T Consensus       138 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (337)
T 1r6d_A          138 SWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGAN  213 (337)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH----CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCe
Confidence                  22346789999999999999998776    59999999999976543211111122222222111         


Q ss_pred             CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ...+..++|+|+++++++...   .+|+.+++.+|..+
T Consensus       214 ~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          214 VREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             eEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            123567899999999988643   37899999988654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=4.8e-21  Score=172.28  Aligned_cols=226  Identities=16%  Similarity=0.099  Sum_probs=150.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD-AAVSALRS----LGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~-~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+..    .+.++.++.+|+++.++++++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999865321 11112211    2356889999999999999988865   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----  164 (299)
                        ++|+||||||.....    .+.++++..+++|+.++.++++++.+.+.+ .       .++||++||...+...    
T Consensus        78 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-------~~~iv~~SS~~v~g~~~~~~  143 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-------KTRFYQASTSELYGLVQEIP  143 (372)
T ss_dssp             --CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-------TCEEEEEEEGGGGTTCCSSS
T ss_pred             --CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C-------CcEEEEeCChhhhCCCCCCC
Confidence              799999999975432    233456788999999999999998765321 1       3789999997654321    


Q ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---hHHhHHHHhc---------
Q 022335          165 -------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---DEINSKARDY---------  225 (299)
Q Consensus       165 -------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~---------  225 (299)
                             .....|+.+|++.+.+++.++.++    |+.+..+.|..+..+........   ..........         
T Consensus       144 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  219 (372)
T 1db3_A          144 QKETTPFYPRSPYAVAKLYAYWITVNYRESY----GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGN  219 (372)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESC
T ss_pred             CCccCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecC
Confidence                   235689999999999999999876    35565666554433321111100   1111111111         


Q ss_pred             -CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          226 -MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       226 -~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                       .....+...+|+|++++.++....    ++.+++.+|..
T Consensus       220 ~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  255 (372)
T 1db3_A          220 MDSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQ  255 (372)
T ss_dssp             TTCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCC
T ss_pred             CCceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence             111246789999999998885432    35667665543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.87  E-value=3.1e-22  Score=167.90  Aligned_cols=208  Identities=12%  Similarity=-0.035  Sum_probs=150.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +++|||||+|+||++++++|+++|++|++++|+++..+.       ...++.++.+|+++.++++++++       ++|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------ENEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------CCTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------ccCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            589999999999999999999999999999999865322       23579999999999999888876       6899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC---------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW---------  165 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  165 (299)
                      |||++|.....          .+.+++|+.++.++++++..    .+       ..+||++||.....+.+         
T Consensus        71 vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~~~----~~-------~~~~v~~Ss~~~~~~~~~~~~~~~~~  129 (227)
T 3dhn_A           71 VISAFNPGWNN----------PDIYDETIKVYLTIIDGVKK----AG-------VNRFLMVGGAGSLFIAPGLRLMDSGE  129 (227)
T ss_dssp             EEECCCC----------------CCSHHHHHHHHHHHHHHH----TT-------CSEEEEECCSTTSEEETTEEGGGTTC
T ss_pred             EEEeCcCCCCC----------hhHHHHHHHHHHHHHHHHHH----hC-------CCEEEEeCChhhccCCCCCccccCCc
Confidence            99999854211          12678899998888777643    32       46899999987654432         


Q ss_pred             -CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          166 -YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       166 -~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                       ....|+.+|++.+.+.+.++.    ..|+++++++||++.++............... .......+..++|+|++++.+
T Consensus       130 ~p~~~Y~~sK~~~e~~~~~~~~----~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~ai~~~  204 (227)
T 3dhn_A          130 VPENILPGVKALGEFYLNFLMK----EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMI-VDIVGNSHISVEDYAAAMIDE  204 (227)
T ss_dssp             SCGGGHHHHHHHHHHHHHTGGG----CCSSEEEEEECCSEEESCCCCCCCEEESSBCC-CCTTSCCEEEHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhh----ccCccEEEEeCCcccCCCccccceeecCCCcc-cCCCCCcEEeHHHHHHHHHHH
Confidence             367899999999988877764    44899999999998655322211110000000 000113457899999999999


Q ss_pred             cCCCCCCccCcEEEeCCccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~  264 (299)
                      +...  ...|+.+++.+...
T Consensus       205 l~~~--~~~g~~~~~~~~~~  222 (227)
T 3dhn_A          205 LEHP--KHHQERFTIGYLEH  222 (227)
T ss_dssp             HHSC--CCCSEEEEEECCSC
T ss_pred             HhCc--cccCcEEEEEeehh
Confidence            9654  36788888776544

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.87  E-value=8.7e-22  Score=173.63  Aligned_cols=216  Identities=15%  Similarity=0.060  Sum_probs=142.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSL---GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+..+.. ..+...   ..++.++.+|++++++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            578999999999999999999999999999998 65321111 111111   1257889999999999888776      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC----
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----  165 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~----  165 (299)
                       ++|+|||+|+..   ...  ..+.+++.+++|+.++.++++++.+.+   .       .++||++||..+..+.+    
T Consensus        74 -~~d~vih~A~~~---~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-------~~~iV~~SS~~~~~~~~~~~~  137 (322)
T 2p4h_X           74 -GCVGIFHTASPI---DFA--VSEPEEIVTKRTVDGALGILKACVNSK---T-------VKRFIYTSSGSAVSFNGKDKD  137 (322)
T ss_dssp             -TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTCS---S-------CCEEEEEEEGGGTSCSSSCCS
T ss_pred             -CCCEEEEcCCcc---cCC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C-------ccEEEEeccHHHcccCCCCCe
Confidence             689999999632   111  112235689999999999999886431   1       47899999987543221    


Q ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH--HhHHHHh-
Q 022335          166 ------------------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE--INSKARD-  224 (299)
Q Consensus       166 ------------------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~--~~~~~~~-  224 (299)
                                        ....|+.||++.+.+++.++.+    +|+++++++||.+.++..........  ....... 
T Consensus       138 ~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~  213 (322)
T 2p4h_X          138 VLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ----NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGK  213 (322)
T ss_dssp             EECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSC
T ss_pred             ecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh----cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCC
Confidence                              1126999998777776655433    48999999999997664332222111  0010111 


Q ss_pred             --cCCCC--CCCCHHHHHHHHHHHcCCCCCCccCcEEEe
Q 022335          225 --YMPLY--KLGEKWDIAMAALYLTSDTGKYVNGTTLIV  259 (299)
Q Consensus       225 --~~~~~--~~~~~~dva~~~~~l~s~~~~~~~G~~i~~  259 (299)
                        ..+..  .+..++|+|+++++++...  ..+|+ ++.
T Consensus       214 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~  249 (322)
T 2p4h_X          214 KEQIGVTRFHMVHVDDVARAHIYLLENS--VPGGR-YNC  249 (322)
T ss_dssp             GGGCCEEEEEEEEHHHHHHHHHHHHHSC--CCCEE-EEC
T ss_pred             CccCcCCCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEE
Confidence              01111  3689999999999998642  25676 444

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.87  E-value=2e-21  Score=171.01  Aligned_cols=210  Identities=13%  Similarity=0.077  Sum_probs=125.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++++|||||+|+||++++++|+++|++|++++|+.+.           . +  ++.+|+++.+++.++++..     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence            6789999999999999999999999999999987643           1 1  6789999999998888765     799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc----------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----------  163 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~----------  163 (299)
                      +|||+||....    ..+.+++++.+++|+.++.++++++.+.            +++||++||...+.+          
T Consensus        63 ~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------------~~~~v~~SS~~v~~~~~~~~~E~~~  126 (315)
T 2ydy_A           63 VIVHCAAERRP----DVVENQPDAASQLNVDASGNLAKEAAAV------------GAFLIYISSDYVFDGTNPPYREEDI  126 (315)
T ss_dssp             EEEECC-----------------------CHHHHHHHHHHHHH------------TCEEEEEEEGGGSCSSSCSBCTTSC
T ss_pred             EEEECCcccCh----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------------CCeEEEEchHHHcCCCCCCCCCCCC
Confidence            99999996532    1245667889999999999999998753            358999999876544          


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHH-h-------cCCCCCCCCHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR-D-------YMPLYKLGEKW  235 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~  235 (299)
                      ......|+.+|++.+.+++.++.++   ..+|.+.|. |+..+..  ..+.. ....... .       ..+...+..++
T Consensus       127 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~lR~~~v~-G~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~  199 (315)
T 2ydy_A          127 PAPLNLYGKTKLDGEKAVLENNLGA---AVLRIPILY-GEVEKLE--ESAVT-VMFDKVQFSNKSANMDHWQQRFPTHVK  199 (315)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHCTTC---EEEEECSEE-CSCSSGG--GSTTG-GGHHHHHCCSSCEEEECSSBBCCEEHH
T ss_pred             CCCcCHHHHHHHHHHHHHHHhCCCe---EEEeeeeee-CCCCccc--ccHHH-HHHHHHHhcCCCeeeccCceECcEEHH
Confidence            2346789999999999998875332   145555554 4432210  01111 1111111 1       12334578899


Q ss_pred             HHHHHHHHHcCCC-CCCccCcEEEeCCcccc
Q 022335          236 DIAMAALYLTSDT-GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       236 dva~~~~~l~s~~-~~~~~G~~i~~dgg~~~  265 (299)
                      |+|+++++++... .....|+.+++.+|..+
T Consensus       200 Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          200 DVATVCRQLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             HHHHHHHHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             HHHHHHHHHHHhhccccCCCCeEEEcCCCcc
Confidence            9999999988642 12357889999887654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.87  E-value=5.1e-21  Score=170.23  Aligned_cols=228  Identities=14%  Similarity=0.059  Sum_probs=155.5

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcC-------CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHG-------ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   79 (299)
                      .+...|+++++|||||+|+||.+++++|+++|       ++|++++|+.+....      ....++.++.+|+++.++++
T Consensus         7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~   80 (342)
T 2hrz_A            7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAE   80 (342)
T ss_dssp             CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHH
T ss_pred             CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHH
Confidence            33445789999999999999999999999999       899999997643211      12456889999999999988


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc
Q 022335           80 KVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL  159 (299)
Q Consensus        80 ~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~  159 (299)
                      ++++      +++|+|||+||....     .+.+++++.+++|+.++.++++++.+...+...      .++||++||..
T Consensus        81 ~~~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~------~~~iv~~SS~~  143 (342)
T 2hrz_A           81 KLVE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY------KPRVVFTSSIA  143 (342)
T ss_dssp             HHHH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC------CCEEEEEEEGG
T ss_pred             HHHh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCC------CcEEEEeCchH
Confidence            8775      489999999996531     234568889999999999999998875433210      36899999987


Q ss_pred             ccccC-C----------CchHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEe--CCccCCCCCCCCCCchHHhHHHHhc
Q 022335          160 HYTAS-W----------YQIHVAAAKAAVDAITRNLALEWG-ADYDIRVNGIA--PGPIGDTPGMNKLAPDEINSKARDY  225 (299)
Q Consensus       160 ~~~~~-~----------~~~~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~--pG~v~t~~~~~~~~~~~~~~~~~~~  225 (299)
                      .+.+. +          ....|+.+|++.+.+++.++.++. ....+|++.+.  ||.+.+..  ..+ ...........
T Consensus       144 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~--~~~-~~~~~~~~~~~  220 (342)
T 2hrz_A          144 VFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA--SGF-FSNILREPLVG  220 (342)
T ss_dssp             GCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG--GGH-HHHHHHHHHTT
T ss_pred             hhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh--HHH-HHHHHHHHhcC
Confidence            65432 1          467899999999999998886541 01235555554  66542210  000 01111211111


Q ss_pred             C----CCCC-----CCCHHHHHHHHHHHcCCCCC-CccCcEEEeC
Q 022335          226 M----PLYK-----LGEKWDIAMAALYLTSDTGK-YVNGTTLIVD  260 (299)
Q Consensus       226 ~----~~~~-----~~~~~dva~~~~~l~s~~~~-~~~G~~i~~d  260 (299)
                      .    +...     +..++|+|++++.++..... ...|+.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          221 QEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             CCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             CCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence            1    1211     46799999999988753221 1146777774

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.86  E-value=3.5e-21  Score=161.10  Aligned_cols=200  Identities=12%  Similarity=0.000  Sum_probs=138.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|+||++++++|+++|++|++++|+++.++.+      ...++.++.+|+++.++         +.++++|+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH---------hhcccCCEE
Confidence            599999999999999999999999999999998765533      23468999999999887         234589999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC---------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY---------  166 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  166 (299)
                      |||||......           ...+|+.++.++    ++.+++.        +++||++||..+..+.+.         
T Consensus        67 i~~ag~~~~~~-----------~~~~n~~~~~~l----~~a~~~~--------~~~~v~~SS~~~~~~~~~~~~~~~~~~  123 (224)
T 3h2s_A           67 VDALSVPWGSG-----------RGYLHLDFATHL----VSLLRNS--------DTLAVFILGSASLAMPGADHPMILDFP  123 (224)
T ss_dssp             EECCCCCTTSS-----------CTHHHHHHHHHH----HHTCTTC--------CCEEEEECCGGGSBCTTCSSCGGGGCC
T ss_pred             EECCccCCCcc-----------hhhHHHHHHHHH----HHHHHHc--------CCcEEEEecceeeccCCCCccccccCC
Confidence            99999762211           124566665544    4444433        378999999876654433         


Q ss_pred             -----chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          167 -----QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       167 -----~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                           ...|+.+|++.+.+.     ++.+..|+++++|+||++.++.....+  ...............+.+++|+|+++
T Consensus       124 ~~~~~~~~y~~sK~~~e~~~-----~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~DvA~~~  196 (224)
T 3h2s_A          124 ESAASQPWYDGALYQYYEYQ-----FLQMNANVNWIGISPSEAFPSGPATSY--VAGKDTLLVGEDGQSHITTGNMALAI  196 (224)
T ss_dssp             GGGGGSTTHHHHHHHHHHHH-----HHTTCTTSCEEEEEECSBCCCCCCCCE--EEESSBCCCCTTSCCBCCHHHHHHHH
T ss_pred             CCCccchhhHHHHHHHHHHH-----HHHhcCCCcEEEEcCccccCCCcccCc--eecccccccCCCCCceEeHHHHHHHH
Confidence                 578999999888541     222266999999999999765221110  00000000011223568999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      +.++....  ..|+.+.+.+-
T Consensus       197 ~~~l~~~~--~~g~~~~~~~~  215 (224)
T 3h2s_A          197 LDQLEHPT--AIRDRIVVRDA  215 (224)
T ss_dssp             HHHHHSCC--CTTSEEEEEEC
T ss_pred             HHHhcCcc--ccCCEEEEecC
Confidence            99996533  56888877543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.86  E-value=6.4e-22  Score=177.27  Aligned_cols=221  Identities=14%  Similarity=0.132  Sum_probs=154.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..++++++|||||+|+||.+++++|+++| ++|++++|+.....  ...+   . ++. +.+|+++.+.++++++.  ..
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---~-~~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---V-DLN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---T-TSC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---c-Cce-EeeecCcHHHHHHHHhh--cc
Confidence            34678999999999999999999999999 99999999764321  0111   1 222 67899999888877653  12


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC---
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW---  165 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~---  165 (299)
                      ++++|+|||+||....      ..+++++.+++|+.++.++++++.+.    +       . +||++||...+....   
T Consensus       113 ~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~-------~-r~V~~SS~~v~g~~~~~~  174 (357)
T 2x6t_A          113 FGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E-------I-PFLYASSAATYGGRTSDF  174 (357)
T ss_dssp             CSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-------C-CEEEEEEGGGGCSCSSCC
T ss_pred             cCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----C-------C-eEEEEcchHHhCCCCCCC
Confidence            5689999999996543      22346788999999999999988762    2       3 799999987654332   


Q ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHHhcC-------
Q 022335          166 --------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKARDYM-------  226 (299)
Q Consensus       166 --------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~~~~-------  226 (299)
                              ....|+.+|++.+.+++.++.+    .|+++++++||.+.++.....    .....+........       
T Consensus       175 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (357)
T 2x6t_A          175 IESREYEKPLNVFGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEG  250 (357)
T ss_dssp             CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETT
T ss_pred             cCCcCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCC
Confidence                    2568999999999999988754    379999999999975532211    00111222222111       


Q ss_pred             --C-CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 --P-LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 --~-~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                        . ...+..++|+|+++++++....    |+.+++.+|..+
T Consensus       251 ~~~~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          251 SENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             GGGCEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             CCcceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence              1 2345789999999999986433    889999887543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=6.7e-21  Score=171.70  Aligned_cols=225  Identities=16%  Similarity=0.074  Sum_probs=154.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV-----LDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~-----~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +++|||||+|+||++++++|+++|++|++++|+.+.     ++.+.+++.. ...++.++.+|+++.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997542     2222111111 2346889999999999999988865   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----  163 (299)
                        ++|+|||+||....    ..+.++++..+++|+.++.++++++.+...+ .       .++||++||...+..     
T Consensus       102 --~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~-------~~~iv~~SS~~~~~~~~~~~  167 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-------SVKFYQASTSELYGKVQEIP  167 (375)
T ss_dssp             --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-------TCEEEEEEEGGGTCSCSSSS
T ss_pred             --CCCEEEECCCcccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-c-------cceEEEecchhhhCCCCCCC
Confidence              79999999996432    1124567889999999999999998764321 0       278999999876542     


Q ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch---HHhHHHHhc-CC------
Q 022335          164 ------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD---EINSKARDY-MP------  227 (299)
Q Consensus       164 ------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~~~~~~~-~~------  227 (299)
                            ......|+.+|++.+.+++.++.++    |+.+.++.|+.+..+.........   ......... .+      
T Consensus       168 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  243 (375)
T 1t2a_A          168 QKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGN  243 (375)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESC
T ss_pred             CCccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCC
Confidence                  1235689999999999999999876    478888887766443221111111   111111111 11      


Q ss_pred             ---CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          228 ---LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       228 ---~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                         ...+...+|+|++++.++....    ++.+++.++..
T Consensus       244 ~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  279 (375)
T 1t2a_A          244 LDAKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEV  279 (375)
T ss_dssp             TTCEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCC
T ss_pred             CCceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCc
Confidence               1235779999999999885432    35566655543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.86  E-value=7.4e-21  Score=169.18  Aligned_cols=217  Identities=13%  Similarity=0.040  Sum_probs=156.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCCc
Q 022335           15 KVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g~i   92 (299)
                      +++|||||+|+||++++++|+++ |++|++++|+.+..+.+.     ...++.++.+|+++ .+.++++++       ++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            36999999999999999999998 899999999876543221     13468999999998 456666665       58


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-------  165 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-------  165 (299)
                      |+|||+||.....    ...+++++.+++|+.++.++++++.+    .        +++||++||...+....       
T Consensus        69 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--------~~~~v~~SS~~v~g~~~~~~~~e~  132 (345)
T 2bll_A           69 DVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----Y--------RKRIIFPSTSEVYGMCSDKYFDED  132 (345)
T ss_dssp             SEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHH----T--------TCEEEEECCGGGGBTCCCSSBCTT
T ss_pred             CEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHHH----h--------CCeEEEEecHHHcCCCCCCCcCCc
Confidence            9999999965321    11245677899999999998887753    1        36899999976543211       


Q ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----Cc----hHHhHHHHhcC
Q 022335          166 -----------YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----AP----DEINSKARDYM  226 (299)
Q Consensus       166 -----------~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~----~~~~~~~~~~~  226 (299)
                                 ....|+.+|++.+.+++.++.++    |+++++++||.+.++......    ..    ...........
T Consensus       133 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (345)
T 2bll_A          133 HSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  208 (345)
T ss_dssp             TCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTC
T ss_pred             ccccccCcccCcccccHHHHHHHHHHHHHHHHhc----CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCC
Confidence                       12379999999999999988765    699999999999765432110    00    11222222221


Q ss_pred             C---------CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          227 P---------LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       227 ~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +         ...+..++|+|++++.++........|+.+++.++.
T Consensus       209 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          209 PIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             CEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             CcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            1         123678999999999998755444678999998874

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.86  E-value=1.2e-20  Score=169.78  Aligned_cols=227  Identities=16%  Similarity=0.091  Sum_probs=161.0

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR-RQEHAKKVVE   83 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~v~~~~~   83 (299)
                      +..+..|++++||||||+|.||.+++++|+++ |++|++++|+.+..+.+.     ...++.++.+|++ +.++++++++
T Consensus        16 ~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           16 TQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-----KHERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             -------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-----GSTTEEEEECCTTTCHHHHHHHHH
T ss_pred             hcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-----cCCCeEEEeCccCCCHHHHHHHhc
Confidence            34445677899999999999999999999999 999999999875543321     1247999999999 9999988877


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                             ++|+|||+|+.....    ...++..+.+++|+.++.++++++...            +.+||++||...+..
T Consensus        91 -------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~------------~~~~v~~SS~~vyg~  147 (372)
T 3slg_A           91 -------KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAVKY------------GKHLVFPSTSEVYGM  147 (372)
T ss_dssp             -------HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHH------------TCEEEEECCGGGGBS
T ss_pred             -------cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHh------------CCcEEEeCcHHHhCC
Confidence                   589999999965421    123445678899999999998887543            257999999654332


Q ss_pred             C------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--------chH
Q 022335          164 S------------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--------PDE  217 (299)
Q Consensus       164 ~------------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--------~~~  217 (299)
                      .                  .....|+.+|.+.+.+++.++.    . |+++++++|+.+..+.......        -..
T Consensus       148 ~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~----~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~  222 (372)
T 3slg_A          148 CADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM----E-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQ  222 (372)
T ss_dssp             CCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHT----T-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHH
T ss_pred             CCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHH----C-CCCEEEEccccccCCCcccccccccccchHHHH
Confidence            1                  2234799999999999887763    3 8999999999997654322110        111


Q ss_pred             HhHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCC-cccc
Q 022335          218 INSKARDYM---------PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDG-GLWL  265 (299)
Q Consensus       218 ~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg-g~~~  265 (299)
                      +........         ....+...+|+|++++.++........|+.+++.+ |..+
T Consensus       223 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~  280 (372)
T 3slg_A          223 FLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNF  280 (372)
T ss_dssp             HHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEE
T ss_pred             HHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCc
Confidence            222222221         11245689999999999997654446899999988 4444

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.86  E-value=1.3e-21  Score=168.39  Aligned_cols=182  Identities=13%  Similarity=0.095  Sum_probs=142.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .|++|||||+|+||++++++|+++|++|++++|+....         ...++.++.+|+++++++.++++       ++|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   65 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---------AEAHEEIVACDLADAQAVHDLVK-------DCD   65 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---------CCTTEEECCCCTTCHHHHHHHHT-------TCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---------cCCCccEEEccCCCHHHHHHHHc-------CCC
Confidence            36899999999999999999999999999999987431         11357889999999999888776       699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC--------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW--------  165 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~--------  165 (299)
                      +||||||...        .++++..+++|+.++.++++++.+    .+       .++||++||...+.+.+        
T Consensus        66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~-------~~~iv~~SS~~~~~~~~~~~~~~E~  126 (267)
T 3ay3_A           66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARN----LG-------KPRIVFASSNHTIGYYPRTTRIDTE  126 (267)
T ss_dssp             EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHH----TT-------CCEEEEEEEGGGSTTSBTTSCBCTT
T ss_pred             EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----hC-------CCEEEEeCCHHHhCCCCCCCCCCCC
Confidence            9999999652        134678899999999999998864    22       47999999987654332        


Q ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          166 ----YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       166 ----~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                          ....|+.+|++++.+++.++.    .+|+++++++||++..++.     ....         ...+.+++|+|+++
T Consensus       127 ~~~~~~~~Y~~sK~~~e~~~~~~~~----~~gi~~~~lrp~~v~~~~~-----~~~~---------~~~~~~~~dva~~~  188 (267)
T 3ay3_A          127 VPRRPDSLYGLSKCFGEDLASLYYH----KFDIETLNIRIGSCFPKPK-----DARM---------MATWLSVDDFMRLM  188 (267)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHH----TTCCCEEEEEECBCSSSCC-----SHHH---------HHHBCCHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH----HcCCCEEEEeceeecCCCC-----CCCe---------eeccccHHHHHHHH
Confidence                247899999999999988764    4489999999999842211     1111         11257899999999


Q ss_pred             HHHcCCC
Q 022335          242 LYLTSDT  248 (299)
Q Consensus       242 ~~l~s~~  248 (299)
                      +.++...
T Consensus       189 ~~~~~~~  195 (267)
T 3ay3_A          189 KRAFVAP  195 (267)
T ss_dssp             HHHHHSS
T ss_pred             HHHHhCC
Confidence            9988643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=1.7e-20  Score=166.30  Aligned_cols=224  Identities=15%  Similarity=0.050  Sum_probs=155.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD-AAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+. ...++.++.+|+++.++++++++.+     ++
T Consensus        14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   87 (335)
T 1rpn_A           14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QP   87 (335)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence            778999999999999999999999999999999865311 1111111 1346889999999999999988865     79


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC-------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-------  165 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~-------  165 (299)
                      |+|||+||.....    ...++++..+++|+.++.++++++.+.    +.      .++||++||...+.+..       
T Consensus        88 d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~~~v~~SS~~v~g~~~~~~~~E~  153 (335)
T 1rpn_A           88 QEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SP------ETRFYQASTSEMFGLIQAERQDEN  153 (335)
T ss_dssp             SEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CT------TSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             CEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh----CC------CCeEEEEeCHHHhCCCCCCCCCcc
Confidence            9999999964321    112346788999999999999988653    10      26899999976543322       


Q ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch---HHhHHHHhc-CC---------C
Q 022335          166 ----YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD---EINSKARDY-MP---------L  228 (299)
Q Consensus       166 ----~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~---~~~~~~~~~-~~---------~  228 (299)
                          ....|+.+|++.+.+++.++.++    |+++.++.|+.+..+.........   ......... .+         .
T Consensus       154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~  229 (335)
T 1rpn_A          154 TPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK  229 (335)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE
T ss_pred             cCCCCCChhHHHHHHHHHHHHHHHHHc----CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcce
Confidence                24589999999999999998776    578888888877554322211111   111111111 11         1


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..+...+|+|++++.++....    ++.+++.++..+
T Consensus       230 ~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          230 RDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             EECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             eceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence            125678999999999886432    356777666543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.85  E-value=1.8e-20  Score=165.75  Aligned_cols=220  Identities=13%  Similarity=0.073  Sum_probs=155.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +++|||||+|+||.+++++|+++|++|++++|+.....   +   ....++.++.+|+++.+++++++++     .++|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~---~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D---AITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G---GSCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h---hcCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            47999999999999999999999999999998754321   1   1123688899999999998888765     38999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----------  164 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  164 (299)
                      |||+||.....    .+.+++++.+++|+.++.++++++.    +.+       .++||++||...+...          
T Consensus        71 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-------~~~~v~~Ss~~~~~~~~~~~~~E~~~  135 (330)
T 2c20_A           71 VMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMD----EFK-------VDKFIFSSTAATYGEVDVDLITEETM  135 (330)
T ss_dssp             EEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHH----HTT-------CCEEEEECCGGGGCSCSSSSBCTTSC
T ss_pred             EEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHH----HcC-------CCEEEEeCCceeeCCCCCCCCCcCCC
Confidence            99999965321    1345678899999999999988764    222       4689999997654321          


Q ss_pred             -CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC-----CchHH----hHHHHhcC--------
Q 022335          165 -WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL-----APDEI----NSKARDYM--------  226 (299)
Q Consensus       165 -~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~-----~~~~~----~~~~~~~~--------  226 (299)
                       .....|+.+|++.+.+++.++.++    |+++++++||.+.++.....+     ....+    ........        
T Consensus       136 ~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (330)
T 2c20_A          136 TNPTNTYGETKLAIEKMLHWYSQAS----NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGD  211 (330)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTS----SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECS
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCC
Confidence             235789999999999999988653    799999999988755311110     01111    11111111        


Q ss_pred             --------CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          227 --------PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       227 --------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                              ....+...+|+|++++.++........|+.+++.++..
T Consensus       212 ~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  257 (330)
T 2c20_A          212 DYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNG  257 (330)
T ss_dssp             CCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTC
T ss_pred             ccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCC
Confidence                    01134668999999988875322112367888776644

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.85  E-value=2.7e-20  Score=165.34  Aligned_cols=167  Identities=17%  Similarity=0.140  Sum_probs=124.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++|||||+|+||++++++|+++|++|++++|.........+.+.. .+.++.++.+|++++++++++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            699999999999999999999999999998643211111222222 1446888999999999988887642     6999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----------  163 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----------  163 (299)
                      ||||||.....    ...++.++.+++|+.++.++++++.    +..       .++||++||...+..           
T Consensus        77 vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-------~~~iv~~SS~~~~g~~~~~~~~e~~~  141 (338)
T 1udb_A           77 VIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMR----AAN-------VKNFIFSSSATVYGDNPKIPYVESFP  141 (338)
T ss_dssp             EEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HHT-------CCEEEEEEEGGGGCSCCSSSBCTTSC
T ss_pred             EEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHHH----hcC-------CCeEEEEccHHHhCCCCCCCcCcccC
Confidence            99999964321    1224456789999999999987643    333       478999999765421           


Q ss_pred             C-CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC
Q 022335          164 S-WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG  205 (299)
Q Consensus       164 ~-~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~  205 (299)
                      . +....|+.||++++.+++.++.++.   |+++.+++|+.+.
T Consensus       142 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~  181 (338)
T 1udb_A          142 TGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPV  181 (338)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHST---TCEEEEEEECEEE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhcC---CCceEEEeeceec
Confidence            1 2367899999999999999988752   7899999886554

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.85  E-value=2.2e-20  Score=155.72  Aligned_cols=204  Identities=12%  Similarity=-0.003  Sum_probs=131.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|+||++++++|+++|++|++++|+++.++.+.       .++.++.+|+++.++         +.+.++|+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d~v   65 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQNVV   65 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCCEE
Confidence            5999999999999999999999999999999987655432       468899999999887         223589999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC---------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY---------  166 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~---------  166 (299)
                      |||+|....             ...+|+.++    +.+++.+++.+       .++||++||..+..+.+.         
T Consensus        66 i~~ag~~~~-------------~~~~~~~~~----~~l~~a~~~~~-------~~~~v~~SS~~~~~~~~~~~~~~~~~~  121 (221)
T 3ew7_A           66 VDAYGISPD-------------EAEKHVTSL----DHLISVLNGTV-------SPRLLVVGGAASLQIDEDGNTLLESKG  121 (221)
T ss_dssp             EECCCSSTT-------------TTTSHHHHH----HHHHHHHCSCC-------SSEEEEECCCC----------------
T ss_pred             EECCcCCcc-------------ccchHHHHH----HHHHHHHHhcC-------CceEEEEecceEEEcCCCCccccccCC
Confidence            999997421             123355444    44555565543       589999999877544332         


Q ss_pred             ---chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          167 ---QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       167 ---~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                         ...|+.+|++.+.+. .+..  . ..|+++++|+||++.++........ ..............+.+++|+|++++.
T Consensus       122 ~~~~~~y~~~k~~~e~~~-~~~~--~-~~gi~~~ivrp~~v~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~  196 (221)
T 3ew7_A          122 LREAPYYPTARAQAKQLE-HLKS--H-QAEFSWTYISPSAMFEPGERTGDYQ-IGKDHLLFGSDGNSFISMEDYAIAVLD  196 (221)
T ss_dssp             ---CCCSCCHHHHHHHHH-HHHT--T-TTTSCEEEEECSSCCCCC----------------------CCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH-HHHh--h-ccCccEEEEeCcceecCCCccCceE-eccccceecCCCCceEeHHHHHHHHHH
Confidence               345889999988873 2222  1 4589999999999976521111000 000000000111246889999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++....  ..|+.+++-+-....
T Consensus       197 ~l~~~~--~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          197 EIERPN--HLNEHFTVAGKLEHH  217 (221)
T ss_dssp             HHHSCS--CTTSEEECCC-----
T ss_pred             HHhCcc--ccCCEEEECCCCccc
Confidence            986543  578999887766543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.85  E-value=4.8e-20  Score=161.94  Aligned_cols=209  Identities=14%  Similarity=0.069  Sum_probs=152.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++++|||||+|.||++++++|+++|++|++++|++...+     +.    ++.++.+|++ .+++.++++       ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~~-------~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQLN-------DVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhhc-------CCC
Confidence            368999999999999999999999999999999843322     11    5889999999 988887765       899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---------  164 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---------  164 (299)
                      +|||+|+.....        +.++.+++|+.++.++++++..    .+       ..+||++||...+...         
T Consensus        65 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~-------~~r~v~~SS~~vyg~~~~~~~~E~~  125 (311)
T 3m2p_A           65 AVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NN-------ISNIVYASTISAYSDETSLPWNEKE  125 (311)
T ss_dssp             EEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TT-------CCEEEEEEEGGGCCCGGGCSBCTTS
T ss_pred             EEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cC-------CCEEEEEccHHHhCCCCCCCCCCCC
Confidence            999999976433        2345688999999988888753    22       3689999996654321         


Q ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCC---------CCCCCC
Q 022335          165 --WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP---------LYKLGE  233 (299)
Q Consensus       165 --~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  233 (299)
                        .....|+.+|.+.+.+++.++.+.    |+++++++|+.+.++..........+........+         ...+..
T Consensus       126 ~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~  201 (311)
T 3m2p_A          126 LPLPDLMYGVSKLACEHIGNIYSRKK----GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLY  201 (311)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHS----CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEE
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHc----CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEE
Confidence              134689999999999999888653    79999999999976543321111222232222211         123567


Q ss_pred             HHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          234 KWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       234 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+|+|++++.++....   .|+.+++.+|..+
T Consensus       202 v~Dva~a~~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          202 AKDAAKSVIYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HHHHHHHHHHHTTCTT---CCEEEEECCSCEE
T ss_pred             HHHHHHHHHHHHhcCC---CCCeEEeCCCCcc
Confidence            8899999999997543   7899999887654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.84  E-value=3.1e-20  Score=179.25  Aligned_cols=221  Identities=14%  Similarity=0.058  Sum_probs=159.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHH-HHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEH-AKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-v~~~~~~~~~~   88 (299)
                      .++++++|||||+|+||.+++++|+++ |++|++++|+.+..+.+.     ...++.++.+|+++.++ ++++++     
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~-----  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-----  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc-----
Confidence            457899999999999999999999998 899999999875432211     13468999999998765 555554     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----  164 (299)
                        ++|+|||+||.....    ...+++++.+++|+.++.++++++.+.            +++||++||...+.+.    
T Consensus       382 --~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~------------~~r~V~~SS~~vyg~~~~~~  443 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY------------RKRIIFPSTSEVYGMCSDKY  443 (660)
T ss_dssp             --HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT------------TCEEEEECCGGGGBTCCSSS
T ss_pred             --CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh------------CCEEEEEecHHHcCCCCCcc
Confidence              589999999965321    123456788999999999998887542            3689999997654321    


Q ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC--------CCCchHHhHHH
Q 022335          165 --------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN--------KLAPDEINSKA  222 (299)
Q Consensus       165 --------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~--------~~~~~~~~~~~  222 (299)
                                    .....|+.||.+.+.+++.++.++    |+++++++||.+.++....        ......+....
T Consensus       444 ~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  519 (660)
T 1z7e_A          444 FDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL  519 (660)
T ss_dssp             BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHH
T ss_pred             cCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECCCcccCCCccccccccccccchHHHHHHHH
Confidence                          122379999999999999988765    6999999999997654321        00011222222


Q ss_pred             HhcCC---------CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          223 RDYMP---------LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       223 ~~~~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ....+         ...+..++|+|+++++++........|+.+++++|.
T Consensus       520 ~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          520 VEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             HHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             HcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            22222         123677999999999998765445679999999885

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.84  E-value=2.8e-20  Score=161.82  Aligned_cols=195  Identities=16%  Similarity=0.156  Sum_probs=145.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+++|||||+|+||++++++|+++|++|++++|+                     .+|+++.++++++++..     ++|
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----~~d   65 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-----KPN   65 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc-----CCC
Confidence            6799999999999999999999999999999996                     37999999999888765     799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC--------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW--------  165 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~--------  165 (299)
                      +|||+||....    +...+++++.+++|+.++.++++++.+.            +.+||++||...+.+..        
T Consensus        66 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~------------~~~iv~~SS~~v~~~~~~~~~~E~~  129 (292)
T 1vl0_A           66 VVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV------------GAEIVQISTDYVFDGEAKEPITEFD  129 (292)
T ss_dssp             EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------------TCEEEEEEEGGGSCSCCSSCBCTTS
T ss_pred             EEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc------------CCeEEEechHHeECCCCCCCCCCCC
Confidence            99999996432    1224567889999999999999998752            24899999986554322        


Q ss_pred             ---CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC-------CCCCCCCHH
Q 022335          166 ---YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-------PLYKLGEKW  235 (299)
Q Consensus       166 ---~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  235 (299)
                         ....|+.+|++.+.+++.++.        .+..++|+.+.++  ...+ ............       ....+..++
T Consensus       130 ~~~~~~~Y~~sK~~~E~~~~~~~~--------~~~~lR~~~v~G~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~  198 (292)
T 1vl0_A          130 EVNPQSAYGKTKLEGENFVKALNP--------KYYIVRTAWLYGD--GNNF-VKTMINLGKTHDELKVVHDQVGTPTSTV  198 (292)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHCS--------SEEEEEECSEESS--SSCH-HHHHHHHHHHCSEEEEESSCEECCEEHH
T ss_pred             CCCCccHHHHHHHHHHHHHHhhCC--------CeEEEeeeeeeCC--CcCh-HHHHHHHHhcCCcEEeecCeeeCCccHH
Confidence               356899999999998876532        3667778777543  1111 111222222111       224567899


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+|+++++++...    .|+.+++.+|..+
T Consensus       199 Dva~~~~~~~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          199 DLARVVLKVIDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             HHHHHHHHHHHHT----CCEEEECCCBSCE
T ss_pred             HHHHHHHHHHhcC----CCcEEEecCCCCc
Confidence            9999999998653    6889999887543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.83  E-value=3.8e-20  Score=164.82  Aligned_cols=218  Identities=13%  Similarity=0.005  Sum_probs=149.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..++++++|||||+|+||++++++|+++|++|++++|+..........+. ...++.++.+|+++..            +
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~   89 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y   89 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h
Confidence            45678999999999999999999999999999999986432111111111 1346889999998752            4


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-------  162 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-------  162 (299)
                      .++|+|||+||.......    .++++..+++|+.++.++++++.+.            +.+||++||...+.       
T Consensus        90 ~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~------------~~~~v~~SS~~v~g~~~~~~~  153 (343)
T 2b69_A           90 IEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV------------GARLLLASTSEVYGDPEVHPQ  153 (343)
T ss_dssp             CCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH------------TCEEEEEEEGGGGBSCSSSSB
T ss_pred             cCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh------------CCcEEEECcHHHhCCCCCCCC
Confidence            689999999996532111    1235678899999999999988642            24899999976542       


Q ss_pred             ---------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCC----
Q 022335          163 ---------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMP----  227 (299)
Q Consensus       163 ---------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~----  227 (299)
                               +......|+.+|++.+.+++.++.++    |+++++++||.+.++.......  ...+........+    
T Consensus       154 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (343)
T 2b69_A          154 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY  229 (343)
T ss_dssp             CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEE
T ss_pred             cccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEc
Confidence                     22345689999999999999988765    6999999999987653321111  1112222222111    


Q ss_pred             -----CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          228 -----LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       228 -----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                           ...+..++|+|++++.++...    .|+.+++.++..
T Consensus       230 ~~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~  267 (343)
T 2b69_A          230 GSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEE  267 (343)
T ss_dssp             SSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             CCCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCC
Confidence                 123568999999999988643    256777777654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.83  E-value=3.1e-21  Score=171.38  Aligned_cols=206  Identities=12%  Similarity=0.079  Sum_probs=139.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH--HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA--VSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~--~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..+..  ...+. ...++.++.+|+++.+++.++++       +
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence            78999999999999999999999999999988876532211  11222 23468899999999988877765       6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-------  164 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  164 (299)
                      +|+|||+|+...   ..  ..+..++.+++|+.++.++++++.+..   .       .++||++||..+..+.       
T Consensus        81 ~D~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-------v~r~V~~SS~~~~~~~~~~~~~~  145 (338)
T 2rh8_A           81 CDFVFHVATPVH---FA--SEDPENDMIKPAIQGVVNVMKACTRAK---S-------VKRVILTSSAAAVTINQLDGTGL  145 (338)
T ss_dssp             CSEEEEESSCCC---C-----------CHHHHHHHHHHHHHHHHCT---T-------CCEEEEECCHHHHHHHHHTCSCC
T ss_pred             CCEEEEeCCccC---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-------cCEEEEEecHHHeecCCcCCCCc
Confidence            899999998542   11  112224588999999999999887532   1       3689999997632110       


Q ss_pred             --------------C---CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhH-------
Q 022335          165 --------------W---YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINS-------  220 (299)
Q Consensus       165 --------------~---~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~-------  220 (299)
                                    +   ....|+.||++.+.+++.++.++    |+++++++||.+.++........ ....       
T Consensus       146 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~~g  220 (338)
T 2rh8_A          146 VVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN----NIDLITVIPTLMAGSSLTSDVPS-SIGLAMSLITG  220 (338)
T ss_dssp             CCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH----TCCEEEEEECEEESCCSSSSCCH-HHHHHHHHHHT
T ss_pred             ccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHHcC
Confidence                          0   01159999999888887776543    79999999999976643322221 1100       


Q ss_pred             ---HHH--h----cCCCCCCCCHHHHHHHHHHHcCC
Q 022335          221 ---KAR--D----YMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       221 ---~~~--~----~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                         ...  .    ......+..++|+|+++++++..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  256 (338)
T 2rh8_A          221 NEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK  256 (338)
T ss_dssp             CHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC
T ss_pred             CccccccccccccccCcccEEEHHHHHHHHHHHHcC
Confidence               000  0    00001368999999999998864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.83  E-value=9.4e-20  Score=159.87  Aligned_cols=215  Identities=13%  Similarity=-0.011  Sum_probs=153.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++++|||||+|+||.+++++|+++  |++|++++|+....+     +..   ++.++.+|+++.+++++++++.     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~D~~d~~~~~~~~~~~-----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---SGPFEVVNALDFNQIEHLVEVH-----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---SSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---CCceEEecCCCHHHHHHHHhhc-----C
Confidence            467999999999999999999999  899999999865421     111   3678899999999998887753     7


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-------  164 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-------  164 (299)
                      +|+|||+||.....     ..+++++.+++|+.++.++++++.+    .+       .++||++||...+.+.       
T Consensus        69 ~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~~v~~SS~~~~~~~~~~~~~~  132 (312)
T 2yy7_A           69 ITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KK-------IKKIFWPSSIAVFGPTTPKENTP  132 (312)
T ss_dssp             CCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TS-------CSEEECCEEGGGCCTTSCSSSBC
T ss_pred             CCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cC-------CCEEEEeccHHHhCCCCCCCCcc
Confidence            99999999964321     1345678899999999999888753    22       3689999998765331       


Q ss_pred             -----CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-----chHHhHHHHhc--------C
Q 022335          165 -----WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDY--------M  226 (299)
Q Consensus       165 -----~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-----~~~~~~~~~~~--------~  226 (299)
                           .....|+.+|++.+.+++.++.++    |+++++++||.+..+.......     ...+.......        .
T Consensus       133 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (312)
T 2yy7_A          133 QYTIMEPSTVYGISKQAGERWCEYYHNIY----GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSE  208 (312)
T ss_dssp             SSCBCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTT
T ss_pred             ccCcCCCCchhHHHHHHHHHHHHHHHHhc----CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCC
Confidence                 225689999999999999988765    6999999999887543211111     01111111111        1


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCc-cCcEEEeCC
Q 022335          227 PLYKLGEKWDIAMAALYLTSDTGKYV-NGTTLIVDG  261 (299)
Q Consensus       227 ~~~~~~~~~dva~~~~~l~s~~~~~~-~G~~i~~dg  261 (299)
                      ....+...+|+|++++.++....... .|+.+++.+
T Consensus       209 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          209 TKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             CCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             ceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            11234678999999999886543222 247788764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=3.9e-19  Score=165.36  Aligned_cols=226  Identities=15%  Similarity=0.031  Sum_probs=155.8

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHc---CCeEEEEeCChhHHHHHHHH--------------HH-hcCCcEEEEEc
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKH---GASVAIMGRRKQVLDAAVSA--------------LR-SLGIKAVGFEG   70 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~---G~~Vv~~~r~~~~~~~~~~~--------------~~-~~~~~v~~~~~   70 (299)
                      ....++++||||||+|+||.+++++|+++   |++|++++|+.+..+.....              +. ....++.++.+
T Consensus        68 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            34567999999999999999999999999   99999999987643322211              11 12357999999


Q ss_pred             CCC------CHHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCC
Q 022335           71 DVR------RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGR  144 (299)
Q Consensus        71 Dl~------~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~  144 (299)
                      |++      +.++++++++       ++|+||||||....        +.+++.+++|+.++.++++++..    .+   
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~---  205 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TK---  205 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SS---
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CC---
Confidence            999      6667777665       58999999997643        22345788999999999887753    22   


Q ss_pred             CCCCCceEEEeccccccccCCC----------------------chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC
Q 022335          145 SSAGGGSILNISATLHYTASWY----------------------QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPG  202 (299)
Q Consensus       145 ~~~~~g~iv~vsS~~~~~~~~~----------------------~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG  202 (299)
                          ..+||++||.........                      ...|+.||.+.+.+++.++.+.    |+++++++||
T Consensus       206 ----~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ivRpg  277 (478)
T 4dqv_A          206 ----LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC----ALPVAVFRCG  277 (478)
T ss_dssp             ----CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH----CCCEEEEEEC
T ss_pred             ----CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh----CCCeEEEECc
Confidence                358999999754332110                      1349999999999999888765    6999999999


Q ss_pred             ccCCCCCCCC-CCchH----HhHHHH--hcCC---------------CCCCCCHHHHHHHHHHHcCCC--CCCccCcEEE
Q 022335          203 PIGDTPGMNK-LAPDE----INSKAR--DYMP---------------LYKLGEKWDIAMAALYLTSDT--GKYVNGTTLI  258 (299)
Q Consensus       203 ~v~t~~~~~~-~~~~~----~~~~~~--~~~~---------------~~~~~~~~dva~~~~~l~s~~--~~~~~G~~i~  258 (299)
                      .|..+..... .....    ......  ...|               ...+...+|+|++++.++...  .....|+.++
T Consensus       278 ~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~yn  357 (478)
T 4dqv_A          278 MILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYH  357 (478)
T ss_dssp             EEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEE
T ss_pred             eeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEE
Confidence            9975432111 11111    111111  1111               123477899999999887531  1234578888


Q ss_pred             eCCccc
Q 022335          259 VDGGLW  264 (299)
Q Consensus       259 ~dgg~~  264 (299)
                      +.++..
T Consensus       358 v~~~~~  363 (478)
T 4dqv_A          358 VMNPHD  363 (478)
T ss_dssp             ESCCCC
T ss_pred             ecCCCC
Confidence            877653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=1.7e-21  Score=161.96  Aligned_cols=196  Identities=14%  Similarity=0.055  Sum_probs=143.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++++||||+|+||++++++|+++|+  +|++++|+++.          ...++.++.+|+++.+++++++         
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~---------   65 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS---------   65 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC---------
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh---------
Confidence            67899999999999999999999998  99999998754          1346888899999887765543         


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||+|....      +.+++++.+++|+.++..+++++.+    ..       .++||++||.....+  ....|+
T Consensus        66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~~v~~Ss~~~~~~--~~~~y~  126 (215)
T 2a35_A           66 IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MG-------ARHYLVVSALGADAK--SSIFYN  126 (215)
T ss_dssp             CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TT-------CCEEEEECCTTCCTT--CSSHHH
T ss_pred             hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cC-------CCEEEEECCcccCCC--CccHHH
Confidence            8999999996432      2345778899999999999888753    22       468999999877643  345799


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeE-EEEEeCCccCCCCCCCCCCchHHhHHHHhcCC----CCCCCCHHHHHHHHHHHcC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIR-VNGIAPGPIGDTPGMNKLAPDEINSKARDYMP----LYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~-v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~s  246 (299)
                      .+|++++.+++.        .|++ +++++||++.++.....+. +...   ....+    ...+.+++|+|++++.++.
T Consensus       127 ~sK~~~e~~~~~--------~~~~~~~~vrp~~v~g~~~~~~~~-~~~~---~~~~~~~~~~~~~i~~~Dva~~~~~~~~  194 (215)
T 2a35_A          127 RVKGELEQALQE--------QGWPQLTIARPSLLFGPREEFRLA-EILA---APIARILPGKYHGIEACDLARALWRLAL  194 (215)
T ss_dssp             HHHHHHHHHHTT--------SCCSEEEEEECCSEESTTSCEEGG-GGTT---CCCC----CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH--------cCCCeEEEEeCceeeCCCCcchHH-HHHH---HhhhhccCCCcCcEeHHHHHHHHHHHHh
Confidence            999999887653        3798 9999999997653221110 0000   00011    1124678999999999986


Q ss_pred             CCCCCccCcEEEeCCcc
Q 022335          247 DTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~  263 (299)
                      ...    ++.+++.++.
T Consensus       195 ~~~----~~~~~i~~~~  207 (215)
T 2a35_A          195 EEG----KGVRFVESDE  207 (215)
T ss_dssp             CCC----SEEEEEEHHH
T ss_pred             cCC----CCceEEcHHH
Confidence            542    6677766554

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.81  E-value=1.7e-19  Score=155.30  Aligned_cols=192  Identities=17%  Similarity=0.156  Sum_probs=138.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|+||++++++|+ +|++|++++|+++. +        .  +   +.+|++++++++++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~v   61 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------G--G---YKLDLTDFPRLEDFIIKK-----RPDVI   61 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------T--C---EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------C--C---ceeccCCHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999 58999999998742 0        1  1   789999999999988865     79999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC----------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----------  165 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  165 (299)
                      |||||....    +...+++++.+++|+.++.++++++.+    .        +++||++||...+.+.+          
T Consensus        62 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--------~~~iv~~SS~~~~~~~~~~~~e~~~~~  125 (273)
T 2ggs_A           62 INAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--------DSYIVHISTDYVFDGEKGNYKEEDIPN  125 (273)
T ss_dssp             EECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--------TCEEEEEEEGGGSCSSSCSBCTTSCCC
T ss_pred             EECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--------CCeEEEEecceeEcCCCCCcCCCCCCC
Confidence            999996532    122466889999999999999998864    2        35899999988765443          


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCC------CCCCCCHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP------LYKLGEKWDIAM  239 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~  239 (299)
                      ....|+.+|++++.+++.    +. -..||++.|. |  .+     .+ ............+      ...+..++|+|+
T Consensus       126 ~~~~Y~~sK~~~e~~~~~----~~-~~~iR~~~v~-G--~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  191 (273)
T 2ggs_A          126 PINYYGLSKLLGETFALQ----DD-SLIIRTSGIF-R--NK-----GF-PIYVYKTLKEGKTVFAFKGYYSPISARKLAS  191 (273)
T ss_dssp             CSSHHHHHHHHHHHHHCC----TT-CEEEEECCCB-S--SS-----SH-HHHHHHHHHTTCCEEEESCEECCCBHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhC----CC-eEEEeccccc-c--cc-----HH-HHHHHHHHHcCCCEEeecCCCCceEHHHHHH
Confidence            256899999999999876    32 2244444444 3  11     11 1111111112111      345789999999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCC
Q 022335          240 AALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      +++++++...   +| .+++.+
T Consensus       192 ~i~~~~~~~~---~g-~~~i~~  209 (273)
T 2ggs_A          192 AILELLELRK---TG-IIHVAG  209 (273)
T ss_dssp             HHHHHHHHTC---CE-EEECCC
T ss_pred             HHHHHHhcCc---CC-eEEECC
Confidence            9999996532   44 777766

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.81  E-value=8.3e-20  Score=159.96  Aligned_cols=215  Identities=14%  Similarity=0.109  Sum_probs=149.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+..    +. +.+|+++.+.++++++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--cCCCcE
Confidence            38999999999999999999999 99999999765321  111221    22 6789999888777665210  236999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC---------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW---------  165 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~---------  165 (299)
                      |||+||....      ..+++++.+++|+.++.++++++.+.    +       . +||++||...+.+..         
T Consensus        72 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-------~-~~v~~SS~~v~g~~~~~~~~E~~~  133 (310)
T 1eq2_A           72 IFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E-------I-PFLYASSAATYGGRTSDFIESREY  133 (310)
T ss_dssp             EEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-------C-CEEEEEEGGGGTTCCSCBCSSGGG
T ss_pred             EEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----C-------C-eEEEEeeHHHhCCCCCCCCCCCCC
Confidence            9999996543      12346778999999999999988643    2       4 799999986543322         


Q ss_pred             --CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHH---------hcCC-CC
Q 022335          166 --YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKAR---------DYMP-LY  229 (299)
Q Consensus       166 --~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~---------~~~~-~~  229 (299)
                        ....|+.+|.+.+.+++.++.+    +|+++++++||.+.++.....    .....+.....         .... ..
T Consensus       134 ~~p~~~Y~~sK~~~e~~~~~~~~~----~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  209 (310)
T 1eq2_A          134 EKPLNVYGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKR  209 (310)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CB
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceE
Confidence              2568999999999999887754    379999999999976532210    00011111111         1112 33


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       230 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+...+|+|++++.++....    |+.+++.+|..+
T Consensus       210 ~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          210 DFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             CEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             ccEEHHHHHHHHHHHHhcCC----CCeEEEeCCCcc
Confidence            45779999999999886432    788999887654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.81  E-value=6.1e-19  Score=155.36  Aligned_cols=209  Identities=13%  Similarity=0.073  Sum_probs=149.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++++|||||+|+||.+++++|+++|++|++++|+.                    .+|+++.++++++++..     ++
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~   56 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RI   56 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CC
Confidence            367899999999999999999999999999988763                    37999999998888754     79


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---------  163 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---------  163 (299)
                      |+|||+|+.....   ....++.++.+++|+.++.++++++.+    .+       ..+||++||...+..         
T Consensus        57 d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-------~~~~v~~SS~~vyg~~~~~~~~E~  122 (321)
T 1e6u_A           57 DQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQ----ND-------VNKLLFLGSSCIYPKLAKQPMAES  122 (321)
T ss_dssp             SEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-------CCEEEEECCGGGSCTTCCSSBCGG
T ss_pred             CEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHH----hC-------CCeEEEEccHHHcCCCCCCCcCcc
Confidence            9999999964211   112345677899999999999888754    22       368999999765421         


Q ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----CchHHhHHHHh-------c
Q 022335          164 -------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----APDEINSKARD-------Y  225 (299)
Q Consensus       164 -------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~-------~  225 (299)
                             .+....|+.+|.+.+.+++.++.++    |+++++++||.+..+......    ...........       .
T Consensus       123 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  198 (321)
T 1e6u_A          123 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPD  198 (321)
T ss_dssp             GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSE
T ss_pred             ccccCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCc
Confidence                   1123589999999999999988765    699999999999765432110    01122222211       1


Q ss_pred             C-------CCCCCCCHHHHHHHHHHHcCCCCC------CccCcEEEeCCccc
Q 022335          226 M-------PLYKLGEKWDIAMAALYLTSDTGK------YVNGTTLIVDGGLW  264 (299)
Q Consensus       226 ~-------~~~~~~~~~dva~~~~~l~s~~~~------~~~G~~i~~dgg~~  264 (299)
                      .       ....+...+|+|++++.++.....      ...|+.+++.++..
T Consensus       199 ~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          199 VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             EEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             eEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence            1       112356899999999998854321      12367888876643

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.81  E-value=4.5e-19  Score=155.92  Aligned_cols=210  Identities=13%  Similarity=0.059  Sum_probs=148.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           16 VALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++|||||+|+||++++++|+++  |++|++++|+....+           ++.++.+|+++.++++++++..     ++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----SID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----CCc
Confidence            3899999999999999999999  899999998764321           3678899999999998887742     799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---------  164 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---------  164 (299)
                      +|||+|+....     ...++++..+++|+.++.++++++.+    .+       .++||++||...+.+.         
T Consensus        65 ~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-------~~~~v~~SS~~~~~~~~~~~~~~e~  128 (317)
T 3ajr_A           65 AIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HR-------VEKVVIPSTIGVFGPETPKNKVPSI  128 (317)
T ss_dssp             EEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-------CCEEEEEEEGGGCCTTSCSSSBCSS
T ss_pred             EEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cC-------CCEEEEecCHHHhCCCCCCCCcccc
Confidence            99999996431     12345678899999999999988753    22       4689999998765432         


Q ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-ch----HHhHHHHhcC--------CC
Q 022335          165 ---WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PD----EINSKARDYM--------PL  228 (299)
Q Consensus       165 ---~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~----~~~~~~~~~~--------~~  228 (299)
                         .....|+.+|++.+.+++.++.++    |++++++.|+.+..+....... ..    .+........        ..
T Consensus       129 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (317)
T 3ajr_A          129 TITRPRTMFGVTKIAAELLGQYYYEKF----GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRA  204 (317)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCC
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHHHhc----CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccce
Confidence               135789999999999999887665    6999999866554432211110 11    1111111110        01


Q ss_pred             CCCCCHHHHHHHHHHHcCCCC-CCccCcEEEeCC
Q 022335          229 YKLGEKWDIAMAALYLTSDTG-KYVNGTTLIVDG  261 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dg  261 (299)
                      ..+...+|+|++++.++.... ....|+.+++.|
T Consensus       205 ~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~  238 (317)
T 3ajr_A          205 LPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA  238 (317)
T ss_dssp             EEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS
T ss_pred             eeeeEHHHHHHHHHHHHhCCccccccCceEecCC
Confidence            123568999999988775432 234568888875

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=1.2e-18  Score=169.21  Aligned_cols=176  Identities=15%  Similarity=0.051  Sum_probs=130.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..++++++|||||+|+||++++++|+++|++|++++|+........+.+.. ...++.++.+|+++.+++++++++.   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            346789999999999999999999999999999999875432222222322 1346888999999999998887753   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----  163 (299)
                        ++|+|||+||......    ..+...+.+++|+.++.++++++.    +.+       .++||++||...+..     
T Consensus        84 --~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-------~~~iV~~SS~~vyg~~~~~~  146 (699)
T 1z45_A           84 --KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQ----QYN-------VSKFVFSSSATVYGDATRFP  146 (699)
T ss_dssp             --CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHH----HHT-------CCEEEEEEEGGGGCCGGGST
T ss_pred             --CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHH----HcC-------CCEEEEECcHHHhCCCcccc
Confidence              7999999999653211    122345678999999999877654    333       478999999765421     


Q ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          164 ----------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       164 ----------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                                ......|+.+|++++.+++.++.++  ..|+++.+++|+.+..+
T Consensus       147 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          147 NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEECC
T ss_pred             ccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc--cCCCcEEEEEeccccCC
Confidence                      1134689999999999999998775  35899999999877543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.79  E-value=4.3e-19  Score=153.98  Aligned_cols=194  Identities=13%  Similarity=0.099  Sum_probs=142.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|+||++++++|+++|++|++++|.                     .+|+++.++++++++..     ++|+|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~v   60 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHII   60 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCEE
Confidence            79999999999999999999999999999992                     47999999999988865     79999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----------  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  164 (299)
                      ||+||.....    ...++++..+++|+.++.++++++.+.            +.+||++||...+.+.           
T Consensus        61 i~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~------------~~~~v~~SS~~vy~~~~~~~~~E~~~~  124 (287)
T 3sc6_A           61 IHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQLV------------GAKLVYISTDYVFQGDRPEGYDEFHNP  124 (287)
T ss_dssp             EECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHHH------------TCEEEEEEEGGGSCCCCSSCBCTTSCC
T ss_pred             EECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHHc------------CCeEEEEchhhhcCCCCCCCCCCCCCC
Confidence            9999975421    111456788999999999999988643            3579999998655332           


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC-------CCCCCCCHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-------PLYKLGEKWDI  237 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dv  237 (299)
                      .....|+.+|.+.+.+++.++     .   +.++++|+.+.++.. ... ............       ....+..++|+
T Consensus       125 ~p~~~Y~~sK~~~E~~~~~~~-----~---~~~ilR~~~v~G~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  194 (287)
T 3sc6_A          125 APINIYGASKYAGEQFVKELH-----N---KYFIVRTSWLYGKYG-NNF-VKTMIRLGKEREEISVVADQIGSPTYVADL  194 (287)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHC-----S---SEEEEEECSEECSSS-CCH-HHHHHHHHTTCSEEEEECSCEECCEEHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHhC-----C---CcEEEeeeeecCCCC-CcH-HHHHHHHHHcCCCeEeecCcccCceEHHHH
Confidence            235689999999998887643     2   357889998865432 111 111222221111       11235669999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      |+++++++....    ++.+++.+|..+
T Consensus       195 a~~~~~~~~~~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          195 NVMINKLIHTSL----YGTYHVSNTGSC  218 (287)
T ss_dssp             HHHHHHHHTSCC----CEEEECCCBSCE
T ss_pred             HHHHHHHHhCCC----CCeEEEcCCCcc
Confidence            999999997543    668888887643

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.79  E-value=7.5e-19  Score=164.65  Aligned_cols=217  Identities=10%  Similarity=-0.011  Sum_probs=154.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH---HHHHHHHHHh---------cCCcEEEEEcCCCCHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV---LDAAVSALRS---------LGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~---~~~~~~~~~~---------~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .++||||||+|.||.+++++|.++|++|++++|+...   .+.+.+.+..         ...++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            5799999999999999999999999999999998763   3333333322         2467999999999988766  


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-  160 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-  160 (299)
                            ...++|+|||+|+...       ....++..+++|+.++.++++++.+     .       ..++|++||... 
T Consensus       228 ------~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~-------~~~~v~iSS~~vG  282 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H-------HARLIYVSTISVG  282 (508)
T ss_dssp             ------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----T-------TCEEEEEEESCTT
T ss_pred             ------CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----C-------CCcEEEeCChhhc
Confidence                  3468999999999653       1234567789999999999998764     2       478999999876 


Q ss_pred             -cc----------------cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC----ch---
Q 022335          161 -YT----------------ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA----PD---  216 (299)
Q Consensus       161 -~~----------------~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~----~~---  216 (299)
                       ..                +......|+.+|.+.+.+++.++.     .|+++++++||.+.++.....+.    ..   
T Consensus       283 ~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  357 (508)
T 4f6l_B          283 TYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFS  357 (508)
T ss_dssp             SEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH-----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHH
T ss_pred             cCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH-----cCCCEEEEecceeccCCCCCcccCCcchHHHH
Confidence             10                011457899999999999887542     48999999999997654333211    11   


Q ss_pred             HHhHHHHhc--CCC------CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          217 EINSKARDY--MPL------YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       217 ~~~~~~~~~--~~~------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .........  .+.      ..+...+|+|+++++++....   .|+.+++.++..+
T Consensus       358 ~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          358 MVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             HHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             HHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence            111222111  111      125678999999999996543   7899999887654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.79  E-value=1.2e-18  Score=151.15  Aligned_cols=199  Identities=15%  Similarity=0.075  Sum_probs=142.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           15 KVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      |++|||||+|+||++++++|+++  |++|++++|+.+..+.+.    .  .++.++.+|+++++++.++++       ++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            46999999999999999999999  999999999876554332    2  257889999999999887765       68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAA  172 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~  172 (299)
                      |+|||+++...       . +      ++|+.++.++++++.    +.+       .++||++||.....   ....|+.
T Consensus        68 d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~----~~~-------~~~~v~~Ss~~~~~---~~~~y~~  119 (287)
T 2jl1_A           68 SKLLFISGPHY-------D-N------TLLIVQHANVVKAAR----DAG-------VKHIAYTGYAFAEE---SIIPLAH  119 (287)
T ss_dssp             SEEEECCCCCS-------C-H------HHHHHHHHHHHHHHH----HTT-------CSEEEEEEETTGGG---CCSTHHH
T ss_pred             CEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHH----HcC-------CCEEEEECCCCCCC---CCCchHH
Confidence            99999998521       1 1      578888888777764    332       46899999987642   2247999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHH---HhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          173 AKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA---RDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       173 sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      +|.+.+.+.+.        .|+++++++||++.++.....+ ........   ........+..++|+|++++.++....
T Consensus       120 ~K~~~E~~~~~--------~~~~~~ilrp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  190 (287)
T 2jl1_A          120 VHLATEYAIRT--------TNIPYTFLRNALYTDFFVNEGL-RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG  190 (287)
T ss_dssp             HHHHHHHHHHH--------TTCCEEEEEECCBHHHHSSGGG-HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHH--------cCCCeEEEECCEeccccchhhH-HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC
Confidence            99999888742        3799999999988543211111 11010000   001122357899999999999986532


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                        ..|+.+++.++..+
T Consensus       191 --~~g~~~~i~~~~~~  204 (287)
T 2jl1_A          191 --HENKTYNLVSNQPW  204 (287)
T ss_dssp             --CTTEEEEECCSSCB
T ss_pred             --CCCcEEEecCCCcC
Confidence              47899999988654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.78  E-value=2.7e-19  Score=156.12  Aligned_cols=201  Identities=12%  Similarity=0.051  Sum_probs=144.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|+||.+++++|+ +|++|++++|+..                 ++.+|+++.++++++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v   58 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI   58 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999 8999999999761                 3578999999998888754     69999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC----------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----------  165 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~----------  165 (299)
                      ||+||.....    ...+++++.+++|+.++.++++++.+    .        +.+||++||...+.+..          
T Consensus        59 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~--------~~~~v~~SS~~vy~~~~~~~~~E~~~~  122 (299)
T 1n2s_A           59 VNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANE----T--------GAWVVHYSTDYVFPGTGDIPWQETDAT  122 (299)
T ss_dssp             EECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----T--------TCEEEEEEEGGGSCCCTTCCBCTTSCC
T ss_pred             EECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----c--------CCcEEEEecccEEeCCCCCCCCCCCCC
Confidence            9999964321    11234677899999999999988742    1        24899999986543321          


Q ss_pred             -CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-------CCCCCHHHH
Q 022335          166 -YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-------YKLGEKWDI  237 (299)
Q Consensus       166 -~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~dv  237 (299)
                       ....|+.+|.+.+.+++.++     .   ++++++|+.+.++... .. ............+.       ..+..++|+
T Consensus       123 ~p~~~Y~~sK~~~E~~~~~~~-----~---~~~ilRp~~v~G~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  192 (299)
T 1n2s_A          123 SPLNVYGKTKLAGEKALQDNC-----P---KHLIFRTSWVYAGKGN-NF-AKTMLRLAKERQTLSVINDQYGAPTGAELL  192 (299)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHC-----S---SEEEEEECSEECSSSC-CH-HHHHHHHHHHCSEEEEECSCEECCEEHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHhC-----C---CeEEEeeeeecCCCcC-cH-HHHHHHHHhcCCCEEeecCcccCCeeHHHH
Confidence             24689999999998886543     2   7889999999765322 11 11222222222111       234569999


Q ss_pred             HHHHHHHcCCCCCCc-cCcEEEeCCcccc
Q 022335          238 AMAALYLTSDTGKYV-NGTTLIVDGGLWL  265 (299)
Q Consensus       238 a~~~~~l~s~~~~~~-~G~~i~~dgg~~~  265 (299)
                      |++++.++....... .|+.+++.+|..+
T Consensus       193 a~~~~~~~~~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          193 ADCTAHAIRVALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             HHHHHHHHHHHHHCGGGCEEEECCCBSCE
T ss_pred             HHHHHHHHHHhccccccCceEEEeCCCCC
Confidence            999999886432122 5888998887643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.78  E-value=4.5e-18  Score=148.97  Aligned_cols=214  Identities=12%  Similarity=0.054  Sum_probs=146.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+++++|||||+|+||++++++|+++|+      +..           .....+.++.+|+++.+++.++++..     
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~~-----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEKV-----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHHS-----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhhc-----
Confidence            35688999999999999999999999998      110           00112334478999999999888753     


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-------
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-------  163 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-------  163 (299)
                      ++|+|||+|+.....   ....++..+.+++|+.++.++++++..    .+       ..+||++||...+..       
T Consensus        61 ~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~-------~~~~v~~SS~~vyg~~~~~~~~  126 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSAFE----VG-------ARKVVSCLSTCIFPDKTTYPID  126 (319)
T ss_dssp             CCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHH----TT-------CSEEEEECCGGGSCSSCCSSBC
T ss_pred             CCCEEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHHHH----cC-------CCeEEEEcchhhcCCCCCCCcc
Confidence            699999999974211   011233567899999999999887743    22       368999999865421       


Q ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC----chHHhHH----HHhcC
Q 022335          164 ---------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA----PDEINSK----ARDYM  226 (299)
Q Consensus       164 ---------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~----~~~~~~~----~~~~~  226 (299)
                               .+....|+.+|.+.+.+++.++.++    |+++++++|+.+..+.......    -..+...    .....
T Consensus       127 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (319)
T 4b8w_A          127 ETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY----GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGS  202 (319)
T ss_dssp             GGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTC
T ss_pred             ccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh----CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCC
Confidence                     1223469999999999999988765    6999999999997654322111    0112222    22222


Q ss_pred             CC---------CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 PL---------YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 ~~---------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.         ..+...+|+|++++.++.... ...|+.+++.+|..+
T Consensus       203 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          203 ALTVWGTGNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDEV  249 (319)
T ss_dssp             CEEEESCSCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGCE
T ss_pred             ceEEeCCCCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCce
Confidence            11         234689999999999886422 245677777766543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.78  E-value=1.3e-19  Score=159.36  Aligned_cols=213  Identities=11%  Similarity=-0.022  Sum_probs=141.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS--LGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++++|||||+|+||.+++++|+++|++|++++|+........+.+..  ...++.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578999999999999999999999999999999976410000000101  0123444555554                


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----  164 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----  164 (299)
                       ++|+|||+|+.........    +....++ |+.++.++++++...    +       ..+||++||...+...     
T Consensus        69 -~~d~vi~~a~~~~~~~~~~----~~~~~~~-n~~~~~~ll~a~~~~----~-------v~~~v~~SS~~v~~~~~~~~~  131 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPRSFK----QPLDYLD-NVDSGRHLLALCTSV----G-------VPKVVVGSTCEVYGQADTLPT  131 (321)
T ss_dssp             -TEEEEEECCCCCCHHHHTT----STTTTHH-HHHHHHHHHHHHHHH----T-------CCEEEEEEEGGGGCSCSSSSB
T ss_pred             -cCCEEEECCccCChHHHHh----CHHHHHH-HHHHHHHHHHHHHHc----C-------CCeEEEecCHHHhCCCCCCCC
Confidence             7999999999754211111    1123455 999999888887543    2       3689999998654332     


Q ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCccCCCCCCCCCCchHHhHHHHhcC---------CC
Q 022335          165 ------WYQIHVAAAKAAVDAITRNLALEWGADYDI-RVNGIAPGPIGDTPGMNKLAPDEINSKARDYM---------PL  228 (299)
Q Consensus       165 ------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~  228 (299)
                            .....|+.+|.+.+.+++.++.+    +|+ ++++++|+.+.++...................         ..
T Consensus       132 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (321)
T 3vps_A          132 PEDSPLSPRSPYAASKVGLEMVAGAHQRA----SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQR  207 (321)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHS----SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCE
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCce
Confidence                  22578999999999999988865    378 99999999997654332111122222222211         11


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..+..++|+|++++.++....   .| .+++.+|..+
T Consensus       208 ~~~v~v~Dva~~~~~~~~~~~---~g-~~~i~~~~~~  240 (321)
T 3vps_A          208 RDFTYITDVVDKLVALANRPL---PS-VVNFGSGQSL  240 (321)
T ss_dssp             ECEEEHHHHHHHHHHGGGSCC---CS-EEEESCSCCE
T ss_pred             EceEEHHHHHHHHHHHHhcCC---CC-eEEecCCCcc
Confidence            235689999999999997654   37 8999887643

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.76  E-value=4.5e-19  Score=153.85  Aligned_cols=199  Identities=16%  Similarity=0.071  Sum_probs=142.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++++|||| +|+||++++++|+++|++|++++|+.+.          ...++.++.+|+++.++++++++      +++|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~------~~~d   65 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVH------LRPE   65 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhc------CCCC
Confidence            56899999 5999999999999999999999998754          23568899999999998877665      3699


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---------  164 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---------  164 (299)
                      +|||+||..         ..+.+..+++|+.++.++++++.    +.+       .++||++||...+...         
T Consensus        66 ~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~-------~~~~v~~SS~~vyg~~~~~~~~E~~  125 (286)
T 3gpi_A           66 ILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAP-------LQHVFFVSSTGVYGQEVEEWLDEDT  125 (286)
T ss_dssp             EEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSC-------CCEEEEEEEGGGCCCCCSSEECTTS
T ss_pred             EEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCC-------CCEEEEEcccEEEcCCCCCCCCCCC
Confidence            999999852         23456778999999999888775    222       4689999997654322         


Q ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh------cCCCCCCCCHHH
Q 022335          165 --WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD------YMPLYKLGEKWD  236 (299)
Q Consensus       165 --~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d  236 (299)
                        .....|+.+|.+.+.+ +..         +++++++|+.+.++...      .+......      ......+...+|
T Consensus       126 ~~~p~~~Y~~sK~~~E~~-~~~---------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~i~v~D  189 (286)
T 3gpi_A          126 PPIAKDFSGKRMLEAEAL-LAA---------YSSTILRFSGIYGPGRL------RMIRQAQTPEQWPARNAWTNRIHRDD  189 (286)
T ss_dssp             CCCCCSHHHHHHHHHHHH-GGG---------SSEEEEEECEEEBTTBC------HHHHHTTCGGGSCSSBCEECEEEHHH
T ss_pred             CCCCCChhhHHHHHHHHH-Hhc---------CCeEEEecccccCCCch------hHHHHHHhcccCCCcCceeEEEEHHH
Confidence              1356899999988777 431         77889999988654321      11111111      112234577899


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|++++.++........|+.+++.+|..+
T Consensus       190 va~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          190 GAAFIAYLIQQRSHAVPERLYIVTDNQPL  218 (286)
T ss_dssp             HHHHHHHHHHHHTTSCCCSEEEECCSCCE
T ss_pred             HHHHHHHHHhhhccCCCCceEEEeCCCCC
Confidence            99999999865322456889998877543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.76  E-value=1.3e-17  Score=144.45  Aligned_cols=195  Identities=13%  Similarity=0.099  Sum_probs=134.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           16 VALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++|||||+|+||++++++|+++  |++|++++|+++..+.+.    .  .++.++.+|+++++++.++++       ++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            3899999999999999999998  999999999876544332    2  247889999999999887765       689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +|||+++...                ..|+.++.++++++    ++.+       .++||++||.... +  ....|+.+
T Consensus        68 ~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~-------~~~~v~~Ss~~~~-~--~~~~y~~s  117 (286)
T 2zcu_A           68 KLLLISSSEV----------------GQRAPQHRNVINAA----KAAG-------VKFIAYTSLLHAD-T--SPLGLADE  117 (286)
T ss_dssp             EEEECC------------------------CHHHHHHHHH----HHHT-------CCEEEEEEETTTT-T--CCSTTHHH
T ss_pred             EEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcC-------CCEEEEECCCCCC-C--CcchhHHH
Confidence            9999998521                12555555555444    4433       4789999998765 2  23479999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHH---HhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA---RDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      |.+.+.+.+.        .|+++++++||++.++. ...+ ........   ........+..++|+|++++.++.... 
T Consensus       118 K~~~e~~~~~--------~~~~~~ilrp~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-  186 (286)
T 2zcu_A          118 HIETEKMLAD--------SGIVYTLLRNGWYSENY-LASA-PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG-  186 (286)
T ss_dssp             HHHHHHHHHH--------HCSEEEEEEECCBHHHH-HTTH-HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS-
T ss_pred             HHHHHHHHHH--------cCCCeEEEeChHHhhhh-HHHh-HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC-
Confidence            9999888753        27999999999875321 1110 00000000   001223456899999999999986532 


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                       .+|+.+++.|+..+
T Consensus       187 -~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          187 -HEGKVYELAGDSAW  200 (286)
T ss_dssp             -CTTCEEEECCSSCB
T ss_pred             -CCCceEEEeCCCcC
Confidence             47999999988544

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.73  E-value=1.9e-17  Score=144.52  Aligned_cols=204  Identities=12%  Similarity=0.015  Sum_probs=135.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+++|||||+|+||++++++|+++| ++|++++|+++....  +.+..  ..+.++.+|+++++++.++++       ++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh-------cC
Confidence            5789999999999999999999999 999999998765321  22322  247889999999999888766       68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--CCCchHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--SWYQIHV  170 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--~~~~~~Y  170 (299)
                      |+|||+++.....            ..+.|+.+    .+.+++.+++.+       .++||++|+......  ......|
T Consensus        74 d~vi~~a~~~~~~------------~~~~~~~~----~~~~~~aa~~~g-------v~~iv~~S~~~~~~~~~~~~~~~y  130 (299)
T 2wm3_A           74 YATFIVTNYWESC------------SQEQEVKQ----GKLLADLARRLG-------LHYVVYSGLENIKKLTAGRLAAAH  130 (299)
T ss_dssp             SEEEECCCHHHHT------------CHHHHHHH----HHHHHHHHHHHT-------CSEEEECCCCCHHHHTTTSCCCHH
T ss_pred             CEEEEeCCCCccc------------cchHHHHH----HHHHHHHHHHcC-------CCEEEEEcCccccccCCCcccCch
Confidence            9999999842110            12234433    444555555544       478999666443221  1124679


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHH--HHhcCCC----CCCCCHHHHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSK--ARDYMPL----YKLGEKWDIAMAALYL  244 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~dva~~~~~l  244 (299)
                      ..+|.+++.+.+.        .|+++++++||++.++... .+........  ..-..+.    ..+..++|+|+++..+
T Consensus       131 ~~sK~~~e~~~~~--------~gi~~~ilrp~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  201 (299)
T 2wm3_A          131 FDGKGEVEEYFRD--------IGVPMTSVRLPCYFENLLS-HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL  201 (299)
T ss_dssp             HHHHHHHHHHHHH--------HTCCEEEEECCEEGGGGGT-TTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHH
T ss_pred             hhHHHHHHHHHHH--------CCCCEEEEeecHHhhhchh-hcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHH
Confidence            9999999888753        2799999999988654221 1111000000  0000111    2356899999999998


Q ss_pred             cCCCCCCccCcEEEeCC
Q 022335          245 TSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dg  261 (299)
                      +.... ...|+.+++.|
T Consensus       202 l~~~~-~~~g~~~~~~g  217 (299)
T 2wm3_A          202 LKMPE-KYVGQNIGLST  217 (299)
T ss_dssp             HHSHH-HHTTCEEECCS
T ss_pred             HcChh-hhCCeEEEeee
Confidence            86432 23688888875

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.73  E-value=2.2e-17  Score=147.61  Aligned_cols=204  Identities=14%  Similarity=0.072  Sum_probs=135.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcC-CCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD-VRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-l~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++++||||+|+||++++++|+++|++|++++|+.+...  .+.+.. ..++.++.+| +++++++.++++       ++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            678999999999999999999999999999999876542  123332 2358889999 999999888765       68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccc-ccccCCCchHHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL-HYTASWYQIHVA  171 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~-~~~~~~~~~~Y~  171 (299)
                      |+||||++....               +.|..+     +.+++.+++.+.      .++||++||.. ...+......|.
T Consensus        75 d~Vi~~a~~~~~---------------~~~~~~-----~~l~~aa~~~g~------v~~~V~~SS~~~~~~~~~~~~~y~  128 (352)
T 1xgk_A           75 HLAFINTTSQAG---------------DEIAIG-----KDLADAAKRAGT------IQHYIYSSMPDHSLYGPWPAVPMW  128 (352)
T ss_dssp             SEEEECCCSTTS---------------CHHHHH-----HHHHHHHHHHSC------CSEEEEEECCCGGGTSSCCCCTTT
T ss_pred             CEEEEcCCCCCc---------------HHHHHH-----HHHHHHHHHcCC------ccEEEEeCCccccccCCCCCccHH
Confidence            999999874310               124333     344444444320      26899999986 333334456799


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC---CchH-HhHHH------HhcCCCCCCCCH-HHHHHH
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---APDE-INSKA------RDYMPLYKLGEK-WDIAMA  240 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~---~~~~-~~~~~------~~~~~~~~~~~~-~dva~~  240 (299)
                      .+|++.+.+++.        .|+++++|+||++- +......   .... .....      ........+..+ +|+|++
T Consensus       129 ~sK~~~E~~~~~--------~gi~~~ivrpg~~g-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~a  199 (352)
T 1xgk_A          129 APKFTVENYVRQ--------LGLPSTFVYAGIYN-NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPA  199 (352)
T ss_dssp             HHHHHHHHHHHT--------SSSCEEEEEECEEG-GGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHHH--------cCCCEEEEecceec-CCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHH
Confidence            999999888754        27899999999773 3221110   0000 00000      000011124677 899999


Q ss_pred             HHHHcCCCCCCccCcEEEeCCc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      ++.++........|+.+++.++
T Consensus       200 i~~~l~~~~~~~~g~~~~l~~~  221 (352)
T 1xgk_A          200 LLQIFKDGPQKWNGHRIALTFE  221 (352)
T ss_dssp             HHHHHHHCHHHHTTCEEEECSE
T ss_pred             HHHHHhCCchhhCCeEEEEecC
Confidence            9998864333356888888854

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.71  E-value=1.2e-16  Score=138.70  Aligned_cols=196  Identities=14%  Similarity=0.031  Sum_probs=129.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++|||||+|+||++++++|.++ |++|++++|++++.+.+      ...++.++.+|+++++++.++++       ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            5999999999999999999998 99999999998754322      13468999999999999887765       7899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      |||++|....       .       ..|+.++    +.+++.+++.+       .++||++||.......+.    ..++
T Consensus        69 vi~~a~~~~~-------~-------~~~~~~~----~~l~~aa~~~g-------v~~iv~~Ss~~~~~~~~~----~~~~  119 (289)
T 3e48_A           69 VVFIPSIIHP-------S-------FKRIPEV----ENLVYAAKQSG-------VAHIIFIGYYADQHNNPF----HMSP  119 (289)
T ss_dssp             EEECCCCCCS-------H-------HHHHHHH----HHHHHHHHHTT-------CCEEEEEEESCCSTTCCS----TTHH
T ss_pred             EEEeCCCCcc-------c-------hhhHHHH----HHHHHHHHHcC-------CCEEEEEcccCCCCCCCC----ccch
Confidence            9999986431       1       1244444    44555556554       478999999764433332    1222


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCC----CCCHHHHHHHHHHHcCCCCC
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK----LGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dva~~~~~l~s~~~~  250 (299)
                      ...  .+   ...+. ..|+++++++||++.++.. ..+  ...........+.+.    +..++|+|++++.++.....
T Consensus       120 ~~~--~~---e~~~~-~~g~~~~ilrp~~~~~~~~-~~~--~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~  190 (289)
T 3e48_A          120 YFG--YA---SRLLS-TSGIDYTYVRMAMYMDPLK-PYL--PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT  190 (289)
T ss_dssp             HHH--HH---HHHHH-HHCCEEEEEEECEESTTHH-HHH--HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG
T ss_pred             hHH--HH---HHHHH-HcCCCEEEEeccccccccH-HHH--HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc
Confidence            111  11   22232 4489999999999965311 000  011111111123222    67899999999999976543


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      .  |+.+++. +..+
T Consensus       191 ~--g~~~~~~-~~~~  202 (289)
T 3e48_A          191 W--GKRYLLS-GYSY  202 (289)
T ss_dssp             T--TCEEEEC-CEEE
T ss_pred             C--CceEEeC-CCcC
Confidence            3  8999998 6655

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.70  E-value=2.9e-16  Score=135.98  Aligned_cols=194  Identities=11%  Similarity=-0.049  Sum_probs=133.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+++||||| |.||.+++++|+++|++|++++|+.+..+.+..      .++.++.+|+++.+            +.++|
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d   65 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVT   65 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCC
Confidence            368999998 999999999999999999999999876554322      35899999999832            45899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--cCCCCCCCCCceEEEeccccccccC-------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKK--GGPGRSSAGGGSILNISATLHYTAS-------  164 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~--~~~~~~~~~~g~iv~vsS~~~~~~~-------  164 (299)
                      +|||+|+.....       +.              ..+.++..+.+  .+       ..+||++||...+...       
T Consensus        66 ~vi~~a~~~~~~-------~~--------------~~~~l~~a~~~~~~~-------~~~~v~~Ss~~vyg~~~~~~~~E  117 (286)
T 3ius_A           66 HLLISTAPDSGG-------DP--------------VLAALGDQIAARAAQ-------FRWVGYLSTTAVYGDHDGAWVDE  117 (286)
T ss_dssp             EEEECCCCBTTB-------CH--------------HHHHHHHHHHHTGGG-------CSEEEEEEEGGGGCCCTTCEECT
T ss_pred             EEEECCCccccc-------cH--------------HHHHHHHHHHhhcCC-------ceEEEEeecceecCCCCCCCcCC
Confidence            999999965321       11              11344455554  22       4689999997654322       


Q ss_pred             ----CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC--CCCchHHhHHHHhcCCCCCCCCHHHHH
Q 022335          165 ----WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN--KLAPDEINSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       165 ----~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva  238 (299)
                          .....|+.+|.+.+.+.+.+       .|+++++++|+.+.++....  .+...... ..........+...+|+|
T Consensus       118 ~~~~~p~~~Y~~sK~~~E~~~~~~-------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva  189 (286)
T 3ius_A          118 TTPLTPTAARGRWRVMAEQQWQAV-------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIR-RIIKPGQVFSRIHVEDIA  189 (286)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHS-------TTCCEEEEEECEEEBTTBSSSTTSSSSCCC-EEECTTCCBCEEEHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHhh-------cCCCEEEEeccceECCCchHHHHHhcCCcc-ccCCCCcccceEEHHHHH
Confidence                12457999999999888765       37999999999886543211  01000000 000001223457789999


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++++.++....   .|+.+++.+|..+
T Consensus       190 ~a~~~~~~~~~---~g~~~~i~~~~~~  213 (286)
T 3ius_A          190 QVLAASMARPD---PGAVYNVCDDEPV  213 (286)
T ss_dssp             HHHHHHHHSCC---TTCEEEECCSCCB
T ss_pred             HHHHHHHhCCC---CCCEEEEeCCCCc
Confidence            99999997544   6889998887654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.69  E-value=5.7e-16  Score=137.95  Aligned_cols=200  Identities=16%  Similarity=0.081  Sum_probs=132.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..+++|||||+|+||++++++|+++|++|++++|+.    ++.+. .+++..  .++.++.+|+++.+++.+++++.   
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~---   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKI-FKALED--KGAIIVYGLINEQEAMEKILKEH---   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHHHH--TTCEEEECCTTCHHHHHHHHHHT---
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHHHh--CCcEEEEeecCCHHHHHHHHhhC---
Confidence            367899999999999999999999999999999976    33222 223322  46889999999999998888753   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc----ccC
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY----TAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~----~~~  164 (299)
                        ++|+|||+++.                   .|+.+..++++++...    +.      -.+||+ |+....    .+.
T Consensus        83 --~~d~Vi~~a~~-------------------~n~~~~~~l~~aa~~~----g~------v~~~v~-S~~g~~~~e~~~~  130 (346)
T 3i6i_A           83 --EIDIVVSTVGG-------------------ESILDQIALVKAMKAV----GT------IKRFLP-SEFGHDVNRADPV  130 (346)
T ss_dssp             --TCCEEEECCCG-------------------GGGGGHHHHHHHHHHH----CC------CSEEEC-SCCSSCTTTCCCC
T ss_pred             --CCCEEEECCch-------------------hhHHHHHHHHHHHHHc----CC------ceEEee-cccCCCCCccCcC
Confidence              79999999985                   2777777777666432    10      235664 443221    122


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCch-------HHhHHHHhcCCCCCCCCHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPD-------EINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      .....|+.+|.+.+.+.+.        .|+++..++||++.+. ........       ..............+..++|+
T Consensus       131 ~p~~~y~~sK~~~e~~l~~--------~g~~~tivrpg~~~g~-~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dv  201 (346)
T 3i6i_A          131 EPGLNMYREKRRVRQLVEE--------SGIPFTYICCNSIASW-PYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDI  201 (346)
T ss_dssp             TTHHHHHHHHHHHHHHHHH--------TTCCBEEEECCEESSC-CCSCC-----CCCCSSCEEEETTSCCCEEEECHHHH
T ss_pred             CCcchHHHHHHHHHHHHHH--------cCCCEEEEEecccccc-cCccccccccccCCCceEEEccCCCceEEecCHHHH
Confidence            4567899999998777653        3799999999988542 21111110       000001111222346789999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCC
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      |++++.++....  ..|+.+++-|
T Consensus       202 a~~~~~~l~~~~--~~~~~~~i~g  223 (346)
T 3i6i_A          202 GKFTMKTVDDVR--TLNKSVHFRP  223 (346)
T ss_dssp             HHHHHHHTTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHhCcc--ccCeEEEEeC
Confidence            999999997542  3366666653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.68  E-value=9.1e-16  Score=134.12  Aligned_cols=195  Identities=15%  Similarity=0.123  Sum_probs=126.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-------hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-------QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+.+ +++..  ..+.++.+|+++++++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999986       444332 33333  347889999999999887776   


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----  162 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----  162 (299)
                          ++|+|||++|...                   +.+...++    +.+++.+.      -.+||.  |..+..    
T Consensus        76 ----~~d~vi~~a~~~~-------------------~~~~~~l~----~aa~~~g~------v~~~v~--S~~g~~~~~~  120 (307)
T 2gas_A           76 ----QVDIVICAAGRLL-------------------IEDQVKII----KAIKEAGN------VKKFFP--SEFGLDVDRH  120 (307)
T ss_dssp             ----TCSEEEECSSSSC-------------------GGGHHHHH----HHHHHHCC------CSEEEC--SCCSSCTTSC
T ss_pred             ----CCCEEEECCcccc-------------------cccHHHHH----HHHHhcCC------ceEEee--cccccCcccc
Confidence                6999999998542                   22233333    34444320      246763  433321    


Q ss_pred             --cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-------chHHhHHHHhcCCCCCCCC
Q 022335          163 --ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-------PDEINSKARDYMPLYKLGE  233 (299)
Q Consensus       163 --~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  233 (299)
                        ..+....| .+|++++.+.+    +    .|++++.++||++.+... ..+.       ................+.+
T Consensus       121 ~~~~p~~~~y-~sK~~~e~~~~----~----~~i~~~~lrp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  190 (307)
T 2gas_A          121 DAVEPVRQVF-EEKASIRRVIE----A----EGVPYTYLCCHAFTGYFL-RNLAQLDATDPPRDKVVILGDGNVKGAYVT  190 (307)
T ss_dssp             CCCTTHHHHH-HHHHHHHHHHH----H----HTCCBEEEECCEETTTTG-GGTTCTTCSSCCSSEEEEETTSCSEEEEEC
T ss_pred             cCCCcchhHH-HHHHHHHHHHH----H----cCCCeEEEEcceeecccc-ccccccccccCCCCeEEEecCCCcceEEee
Confidence              12335689 99999887764    2    268999999998864321 1110       0000000011112234578


Q ss_pred             HHHHHHHHHHHcCCCCCCccCcEEEeCC
Q 022335          234 KWDIAMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       234 ~~dva~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      ++|+|++++.++.+..  ..|+.+.+.|
T Consensus       191 ~~Dva~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          191 EADVGTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHHHHHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHHHHcCcc--ccCceEEEeC
Confidence            9999999999997542  3467777654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.67  E-value=3.7e-16  Score=140.43  Aligned_cols=191  Identities=13%  Similarity=-0.012  Sum_probs=138.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++|||||+|.||++++++|+++|+ +|+.++|+                         +++++++++++       ++|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d~   49 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KADF   49 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCCE
Confidence            699999999999999999999998 77766654                         77888888776       4899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      |||+||.....        +.+..+++|+.++.++++++.    +.+.      ..+||++||.....    ...|+.+|
T Consensus        50 Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~------~~~~v~~Ss~~~~~----~~~Y~~sK  107 (369)
T 3st7_A           50 IVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDILT----RNTK------KPAILLSSSIQATQ----DNPYGESK  107 (369)
T ss_dssp             EEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHHT----TCSS------CCEEEEEEEGGGGS----CSHHHHHH
T ss_pred             EEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHHH----HhCC------CCeEEEeCchhhcC----CCCchHHH
Confidence            99999975432        233457889999988888763    2210      24899999987664    56899999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCCCC--------CCCCHHHHHHHHHHH
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLY--------KLGEKWDIAMAALYL  244 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~dva~~~~~l  244 (299)
                      .+.+.+.+.++.+.    |+++.+++|+.+..+.......  ...+........+..        .+..++|+|++++.+
T Consensus       108 ~~~E~~~~~~~~~~----g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  183 (369)
T 3st7_A          108 LQGEQLLREYAEEY----GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRA  183 (369)
T ss_dssp             HHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh----CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHH
Confidence            99999999988775    5899999999887654332211  112222222222221        245689999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +..... ..|+.+++.++..+
T Consensus       184 l~~~~~-~~~~~~~i~~~~~~  203 (369)
T 3st7_A          184 IEGTPT-IENGVPTVPNVFKV  203 (369)
T ss_dssp             HHTCCC-EETTEECCSCCEEE
T ss_pred             HhCCcc-cCCceEEeCCCCce
Confidence            865432 23788888877554

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.65  E-value=3.7e-15  Score=133.30  Aligned_cols=212  Identities=13%  Similarity=0.033  Sum_probs=139.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-----CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG-----ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G-----~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++++|||||+|+||.+++++|+++|     ++|++++|+.....       ....++.++.+|+++.+++.++++..   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            4689999999999999999999999     99999999865422       12346889999999999888776532   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEE-------Eecccccc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSIL-------NISATLHY  161 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv-------~vsS~~~~  161 (299)
                       +++|+|||+||...         ++.+..+++|+.++.++++++.+...  +       -.++|       ++||...+
T Consensus        71 -~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~-------~~~~v~~~g~~i~~Ss~~vy  131 (364)
T 2v6g_A           71 -TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--N-------LKHISLQTGRKHYMGPFESY  131 (364)
T ss_dssp             -TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--T-------CCEEEEECCTHHHHCCGGGT
T ss_pred             -CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--c-------cceEEeccCceEEEechhhc
Confidence             24999999999652         23567889999999999988864311  1       24666       78887543


Q ss_pred             ccC--------------CCchHHHHHHHHHHHHHHHHHHHhcCCCC-eEEEEEeCCccCCCCCCCCCCc--hH-HhHHH-
Q 022335          162 TAS--------------WYQIHVAAAKAAVDAITRNLALEWGADYD-IRVNGIAPGPIGDTPGMNKLAP--DE-INSKA-  222 (299)
Q Consensus       162 ~~~--------------~~~~~Y~~sKaal~~l~~~la~e~~~~~g-i~v~~i~pG~v~t~~~~~~~~~--~~-~~~~~-  222 (299)
                      ...              +....|.    +.+.+++    ++.+.+| +++.+++|+.+..+........  .. ..... 
T Consensus       132 g~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~----~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~  203 (364)
T 2v6g_A          132 GKIESHDPPYTEDLPRLKYMNFYY----DLEDIML----EEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAIC  203 (364)
T ss_dssp             TTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHH----HHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHH
T ss_pred             cccccCCCCCCccccCCccchhhH----HHHHHHH----HHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHH
Confidence            211              1133462    2334443    3332445 9999999999976543211110  01 12222 


Q ss_pred             -HhcCCCC------------CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          223 -RDYMPLY------------KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       223 -~~~~~~~------------~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                       ....+..            ...+.+|+|++++.++...  ...|+.+++.++..
T Consensus       204 ~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~  256 (364)
T 2v6g_A          204 KHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDV  256 (364)
T ss_dssp             HHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCC
T ss_pred             HhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCc
Confidence             1121111            2234488999999888543  24688999887754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.62  E-value=4.2e-15  Score=130.21  Aligned_cols=200  Identities=16%  Similarity=0.100  Sum_probs=126.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-----hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-----QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++||||+|+||++++++|+++|++|++++|+.     ++.+.+ +++.  ...+.++.+|+++++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~--~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK--QLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence            35799999999999999999999999999999984     333222 2232  3458889999999999888765     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----  163 (299)
                        ++|+|||+++.....               .|+.+..++++++    ++.+.      -.+||+ |+......     
T Consensus        76 --~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~------v~~~v~-S~~g~~~~~~~~~  127 (313)
T 1qyd_A           76 --QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGN------IKRFLP-SEFGMDPDIMEHA  127 (313)
T ss_dssp             --TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCC------CSEEEC-SCCSSCTTSCCCC
T ss_pred             --CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCC------CceEEe-cCCcCCccccccC
Confidence              699999999965321               1455555554444    44320      246775 43321111     


Q ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--------chHHhHHHHhcCCCCCCCCH
Q 022335          164 -SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--------PDEINSKARDYMPLYKLGEK  234 (299)
Q Consensus       164 -~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  234 (299)
                       .+....| .+|.+++.+.+        ..|++++.++||++.+.. ...+.        ................+..+
T Consensus       128 ~~p~~~~y-~sK~~~e~~~~--------~~g~~~~ilrp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~  197 (313)
T 1qyd_A          128 LQPGSITF-IDKRKVRRAIE--------AASIPYTYVSSNMFAGYF-AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE  197 (313)
T ss_dssp             CSSTTHHH-HHHHHHHHHHH--------HTTCCBCEEECCEEHHHH-TTTSSCTTCCSSCCSSEECCBTTSCSEEEEECH
T ss_pred             CCCCcchH-HHHHHHHHHHH--------hcCCCeEEEEeceecccc-ccccccccccccCCCCeEEEeCCCCceEEEEEH
Confidence             2335678 99999887764        236888899998774321 11110        00000000011111235789


Q ss_pred             HHHHHHHHHHcCCCCCCccCcEEEeCC
Q 022335          235 WDIAMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       235 ~dva~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      +|+|+++..++....  ..|+.+.+.|
T Consensus       198 ~Dva~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          198 DDVGTYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHHHHHHHHHTTCGG--GSSSEEECCC
T ss_pred             HHHHHHHHHHHhCcc--cCCceEEEeC
Confidence            999999999987542  2366666654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.60  E-value=9.4e-15  Score=137.05  Aligned_cols=200  Identities=14%  Similarity=0.044  Sum_probs=134.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++||||||+|.||.++++.|+++|++|++++|+....              ..+.+|+.+..         .+.+.++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~~---------~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNPA---------SDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSCC---------TTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccchh---------HHhcCCCC
Confidence            67899999999999999999999999999999987531              12567876421         22345899


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-c---------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-A---------  163 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~---------  163 (299)
                      +|||+||.....   ....+..+..+++|+.++.++++++.   ...+       ..+||++||...+. .         
T Consensus       204 ~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~-------~~r~V~~SS~~vyg~~~~~~~~~E~  270 (516)
T 3oh8_A          204 VLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ-------CTTMISASAVGFYGHDRGDEILTEE  270 (516)
T ss_dssp             EEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS-------CCEEEEEEEGGGGCSEEEEEEECTT
T ss_pred             EEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC-------CCEEEEeCcceEecCCCCCCccCCC
Confidence            999999975332   33445677889999999999999744   2222       46899999976543 0         


Q ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC------------CCCC
Q 022335          164 -SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM------------PLYK  230 (299)
Q Consensus       164 -~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~------------~~~~  230 (299)
                       ......|+.+|...+.+.+.    +. ..|+++++++||.+.++..       .....+....            ....
T Consensus       271 ~~~~~~~y~~~~~~~E~~~~~----~~-~~gi~~~ilRp~~v~Gp~~-------~~~~~~~~~~~~g~~~~~g~g~~~~~  338 (516)
T 3oh8_A          271 SESGDDFLAEVCRDWEHATAP----AS-DAGKRVAFIRTGVALSGRG-------GMLPLLKTLFSTGLGGKFGDGTSWFS  338 (516)
T ss_dssp             SCCCSSHHHHHHHHHHHTTHH----HH-HTTCEEEEEEECEEEBTTB-------SHHHHHHHTTC---CCCCTTSCCEEC
T ss_pred             CCCCcChHHHHHHHHHHHHHH----HH-hCCCCEEEEEeeEEECCCC-------ChHHHHHHHHHhCCCcccCCCCceEc
Confidence             01344688888777665432    22 4589999999999976531       1111111111            1123


Q ss_pred             CCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          231 LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       231 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      +...+|+|++++.++....  ..| .+++-++..
T Consensus       339 ~i~v~Dva~ai~~~l~~~~--~~g-~~ni~~~~~  369 (516)
T 3oh8_A          339 WIAIDDLTDIYYRAIVDAQ--ISG-PINAVAPNP  369 (516)
T ss_dssp             EEEHHHHHHHHHHHHHCTT--CCE-EEEESCSCC
T ss_pred             eEeHHHHHHHHHHHHhCcc--cCC-cEEEECCCC
Confidence            5678999999999986533  234 566665543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.60  E-value=2e-15  Score=132.84  Aligned_cols=197  Identities=14%  Similarity=0.092  Sum_probs=123.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-h----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-Q----VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~----~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++||||+|+||++++++|+++|++|++++|+. +    ......+++..  ..+.++.+|+++++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence            35799999999999999999999999999999986 1    22222223322  358889999999999888776     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----  163 (299)
                        ++|+|||+++...                   +.+.    +.+++.+.+.+.      -++||.  |..+...     
T Consensus        77 --~~d~vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~------v~~~v~--S~~g~~~~~~~~  123 (321)
T 3c1o_A           77 --QVDIVISALPFPM-------------------ISSQ----IHIINAIKAAGN------IKRFLP--SDFGCEEDRIKP  123 (321)
T ss_dssp             --TCSEEEECCCGGG-------------------SGGG----HHHHHHHHHHCC------CCEEEC--SCCSSCGGGCCC
T ss_pred             --CCCEEEECCCccc-------------------hhhH----HHHHHHHHHhCC------ccEEec--cccccCcccccc
Confidence              6899999998532                   2222    334444444320      246762  4333211     


Q ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC---CC---CCCchHHhHHHHhcCCCCCCCCHHH
Q 022335          164 -SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG---MN---KLAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       164 -~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                       .+....| .+|++++.+.+.    .    |++++.|+||++.....   ..   ...................+..++|
T Consensus       124 ~~p~~~~y-~sK~~~e~~~~~----~----~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  194 (321)
T 3c1o_A          124 LPPFESVL-EKKRIIRRAIEA----A----ALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEED  194 (321)
T ss_dssp             CHHHHHHH-HHHHHHHHHHHH----H----TCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHH
T ss_pred             CCCcchHH-HHHHHHHHHHHH----c----CCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHH
Confidence             1224579 999998887752    2    57888889987742110   00   0000000000001112234578999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCC
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      +|+++..++....  ..|+.+.+.|
T Consensus       195 va~~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          195 IAKYTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHHHHHHHCGG--GTTEEEECCC
T ss_pred             HHHHHHHHHhCcc--ccCeEEEEeC
Confidence            9999999987543  3477777765

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.59  E-value=2.6e-15  Score=132.03  Aligned_cols=196  Identities=15%  Similarity=0.170  Sum_probs=121.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++++||||+|+||++++++|+++|++|++++|+.+......+++..  ..+.++.+|+++++++.++++       ++|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            5799999999999999999999999999999987522222233333  247889999999999888776       6999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc------CCCch
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA------SWYQI  168 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~------~~~~~  168 (299)
                      |||+++...                   +.+.    +.+++.+++.+.      ..+||+ |+ .+...      .+...
T Consensus        83 vi~~a~~~~-------------------~~~~----~~l~~aa~~~g~------v~~~v~-S~-~g~~~~~~~~~~p~~~  131 (318)
T 2r6j_A           83 VISALAFPQ-------------------ILDQ----FKILEAIKVAGN------IKRFLP-SD-FGVEEDRINALPPFEA  131 (318)
T ss_dssp             EEECCCGGG-------------------STTH----HHHHHHHHHHCC------CCEEEC-SC-CSSCTTTCCCCHHHHH
T ss_pred             EEECCchhh-------------------hHHH----HHHHHHHHhcCC------CCEEEe-ec-cccCcccccCCCCcch
Confidence            999998531                   1222    333444444320      246764 43 33211      11245


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC---CCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG---MNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      .| .+|.+++.+.+.        .|+++..++||++.....   .....................+..++|+|+++..++
T Consensus       132 ~y-~sK~~~e~~~~~--------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (318)
T 2r6j_A          132 LI-ERKRMIRRAIEE--------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVA  202 (318)
T ss_dssp             HH-HHHHHHHHHHHH--------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHT
T ss_pred             hH-HHHHHHHHHHHh--------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHh
Confidence            78 999988877642        368888899987732100   000000000000001111223578999999999999


Q ss_pred             CCCCCCccCcEEEeCC
Q 022335          246 SDTGKYVNGTTLIVDG  261 (299)
Q Consensus       246 s~~~~~~~G~~i~~dg  261 (299)
                      ....  ..|+.+.+.|
T Consensus       203 ~~~~--~~~~~~~~~g  216 (318)
T 2r6j_A          203 TDPR--ALNRVVIYRP  216 (318)
T ss_dssp             TCGG--GTTEEEECCC
T ss_pred             cCcc--ccCeEEEecC
Confidence            7542  2366666654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.59  E-value=4.3e-15  Score=129.85  Aligned_cols=198  Identities=13%  Similarity=0.061  Sum_probs=122.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHH-----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL-----DAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~-----~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++++||||+|+||++++++|+++|++|++++|+....     ....+++.  ...+.++.+|+++++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence            35799999999999999999999999999999984321     11122232  3458889999999999888776     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc----c-
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT----A-  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~----~-  163 (299)
                        ++|+|||+++...                   +.+...    +++.+++.+.      -.+||+ |+.....    + 
T Consensus        77 --~~d~vi~~a~~~~-------------------~~~~~~----l~~aa~~~g~------v~~~v~-S~~g~~~~~~~~~  124 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ-------------------IESQVN----IIKAIKEVGT------VKRFFP-SEFGNDVDNVHAV  124 (308)
T ss_dssp             --TCSEEEECCCGGG-------------------SGGGHH----HHHHHHHHCC------CSEEEC-SCCSSCTTSCCCC
T ss_pred             --CCCEEEECCcchh-------------------hhhHHH----HHHHHHhcCC------CceEee-cccccCccccccC
Confidence              6899999998531                   222233    3444444320      246763 4432111    1 


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC--C----CCchHHhHHHHhcCCCCCCCCHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN--K----LAPDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      .+....| .+|.+++.+.+.    .    |++++.++||++.+.....  .    ..................+..++|+
T Consensus       125 ~p~~~~y-~sK~~~e~~~~~----~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv  195 (308)
T 1qyc_A          125 EPAKSVF-EVKAKVRRAIEA----E----GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDI  195 (308)
T ss_dssp             TTHHHHH-HHHHHHHHHHHH----H----TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHH
T ss_pred             CcchhHH-HHHHHHHHHHHh----c----CCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHH
Confidence            2234678 999988877653    2    5788889998774321100  0    0000000000111112235788999


Q ss_pred             HHHHHHHcCCCCCCccCcEEEeCC
Q 022335          238 AMAALYLTSDTGKYVNGTTLIVDG  261 (299)
Q Consensus       238 a~~~~~l~s~~~~~~~G~~i~~dg  261 (299)
                      |+++..++....  ..|+.+.+.|
T Consensus       196 a~~~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          196 GTFTIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             HHHHHTTSSCGG--GTTEEEECCC
T ss_pred             HHHHHHHHhCcc--ccCeEEEEeC
Confidence            999999886532  2366677654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.39  E-value=4.9e-14  Score=122.33  Aligned_cols=109  Identities=17%  Similarity=0.257  Sum_probs=83.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++||+++||||+||+|++++..|+++|++|++++|+.++.+++.+++... .++.++.+|+++.++++++++       
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------
Confidence            468999999999999999999999999999999999999888888877543 236678899999998877765       


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCH-HHHHHHHHhhhHHHH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSP-NGFRTVMDIDSVGTF  127 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~-~~~~~~~~~n~~~~~  127 (299)
                      .+|+||||+|.... .+..+.+. ++++..+++|+.+++
T Consensus       188 ~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            58999999985422 11111121 334446677776655

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.36  E-value=1.8e-11  Score=106.44  Aligned_cols=203  Identities=15%  Similarity=0.047  Sum_probs=123.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      +||||||+|.||++++++|.++|++|++++|++..            .++   ..|     .+      ..+.+.++|.+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~---~~~-----~~------~~~~l~~~d~v   55 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRI---TWD-----EL------AASGLPSCDAA   55 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEE---EHH-----HH------HHHCCCSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Cee---ecc-----hh------hHhhccCCCEE
Confidence            59999999999999999999999999999997532            111   111     11      12235689999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----------  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  164 (299)
                      ||.||..........+....+..++.|+.++..+.+++.    ....     ....+|+.||...+.+.           
T Consensus        56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~----~~~~-----~~~~~i~~Ss~~vyg~~~~~~~~E~~p~  126 (298)
T 4b4o_A           56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAIT----KAPQ-----PPKAWVLVTGVAYYQPSLTAEYDEDSPG  126 (298)
T ss_dssp             EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHH----HCSS-----CCSEEEEEEEGGGSCCCSSCCBCTTCCC
T ss_pred             EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHH----HhCC-----CceEEEEEeeeeeecCCCCCcccccCCc
Confidence            999986544444445666677888889888877766553    2221     03457777776554321           


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHh--c------CCCCCCCCHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARD--Y------MPLYKLGEKWD  236 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~d  236 (299)
                      .....|+..+...+..     ... ...++++..+.||.+..+.. ..  ..........  .      .....+...+|
T Consensus       127 ~~~~~~~~~~~~~e~~-----~~~-~~~~~~~~~~r~~~v~g~~~-~~--~~~~~~~~~~~~~~~~g~g~~~~~~ihv~D  197 (298)
T 4b4o_A          127 GDFDFFSNLVTKWEAA-----ARL-PGDSTRQVVVRSGVVLGRGG-GA--MGHMLLPFRLGLGGPIGSGHQFFPWIHIGD  197 (298)
T ss_dssp             SCSSHHHHHHHHHHHH-----HCC-SSSSSEEEEEEECEEECTTS-HH--HHHHHHHHHTTCCCCBTTSCSBCCEEEHHH
T ss_pred             cccchhHHHHHHHHHH-----HHh-hccCCceeeeeeeeEEcCCC-Cc--hhHHHHHHhcCCcceecccCceeecCcHHH
Confidence            1223455444433321     222 36789999999999865421 00  0111111110  0      11123456899


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++++.+++....  ..| .+++.++..+
T Consensus       198 va~a~~~~~~~~~--~~g-~yn~~~~~~~  223 (298)
T 4b4o_A          198 LAGILTHALEANH--VHG-VLNGVAPSSA  223 (298)
T ss_dssp             HHHHHHHHHHCTT--CCE-EEEESCSCCC
T ss_pred             HHHHHHHHHhCCC--CCC-eEEEECCCcc
Confidence            9999999885432  344 7777766544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.10  E-value=2.2e-10  Score=94.83  Aligned_cols=154  Identities=13%  Similarity=0.068  Sum_probs=92.8

Q ss_pred             CCCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC
Q 022335           11 ILKGKVALITGG----------------GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR   74 (299)
Q Consensus        11 ~l~~k~vlItGa----------------s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~   74 (299)
                      +|+||++|||||                ||+||+++|++|+++|++|++++++.. ++        ....+.  .+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~~--~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFVK--RVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTEE--EEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCCe--EEccCc
Confidence            578999999999                699999999999999999999987652 11        011222  457777


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHH--HHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceE
Q 022335           75 QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV--MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSI  152 (299)
Q Consensus        75 ~~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~i  152 (299)
                      .++   +++.+.+.++++|++|||||+....++. ...+.+.+.  -+.++.-.+....-+++.+.+...      .+.+
T Consensus        74 ~~~---~~~~v~~~~~~~Dili~~Aav~d~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~------~~~~  143 (226)
T 1u7z_A           74 ALE---MEAAVNASVQQQNIFIGCAAVADYRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKD------HRPY  143 (226)
T ss_dssp             HHH---HHHHHHHHGGGCSEEEECCBCCSEEESS-CCSSCC-------CEEEEEEEECCCHHHHHHHCSS------SCCE
T ss_pred             HHH---HHHHHHHhcCCCCEEEECCcccCCCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhhhc------CCcE
Confidence            544   5666777889999999999986543332 222233330  122333333344455666665311      1233


Q ss_pred             EEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCc
Q 022335          153 LNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGP  203 (299)
Q Consensus       153 v~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~  203 (299)
                      +.  ++....               +.+.+....++. ++|+++.+.++..
T Consensus       144 ~V--GFaaEt---------------~~l~e~A~~kL~-~k~~d~ivaN~~~  176 (226)
T 1u7z_A          144 VV--GFAAET---------------NNVEEYARQKRI-RKNLDLICANDVS  176 (226)
T ss_dssp             EE--EEEEES---------------SSHHHHHHHHHH-HHTCSEEEEEECS
T ss_pred             EE--Ecchhh---------------chHHHHHHHHHH-hcCCCEEEEeecc
Confidence            21  111111               235555666665 6687777777643

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.04  E-value=2.3e-10  Score=100.98  Aligned_cols=150  Identities=11%  Similarity=0.102  Sum_probs=101.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ++++||||+|.||.+++..|+++|.       .|+++++++  +..+....++.+....  ++ .|+++.++..+.+   
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~--~~-~di~~~~~~~~a~---   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LL-AGLEATDDPKVAF---   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TE-EEEEEESCHHHHT---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc--cc-CCeEeccChHHHh---
Confidence            4799999999999999999999986       799999875  3334433444432212  22 3665544444333   


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-----
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-----  160 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-----  160 (299)
                          .+.|+|||.||.....   ..+   -.+.+++|+.++..+++++...-  ..       ..+++++|+...     
T Consensus        79 ----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~-------~~~vvv~snp~~~~~~~  139 (327)
T 1y7t_A           79 ----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KK-------DVKVLVVGNPANTNALI  139 (327)
T ss_dssp             ----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CT-------TCEEEECSSSHHHHHHH
T ss_pred             ----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CC-------CeEEEEeCCchhhhHHH
Confidence                3789999999975421   122   34578999999999988876531  01       357888777431     


Q ss_pred             ---cc-cCCCchHHHHHHHHHHHHHHHHHHHhc
Q 022335          161 ---YT-ASWYQIHVAAAKAAVDAITRNLALEWG  189 (299)
Q Consensus       161 ---~~-~~~~~~~Y~~sKaal~~l~~~la~e~~  189 (299)
                         .. +.+....|+.+|...+.+...++..++
T Consensus       140 ~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          140 AYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence               11 233445699999999999888887763

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.96  E-value=5.1e-09  Score=77.60  Aligned_cols=73  Identities=16%  Similarity=0.172  Sum_probs=62.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++++|+|+ |++|+++++.|.++| ++|++++|++++.+.+.      ...+.++.+|+++.+++.++++       ++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~~   70 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------GF   70 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------CC
Confidence            578999999 999999999999999 88999999987766543      2346778999999988777654       79


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|++++
T Consensus        71 d~vi~~~~   78 (118)
T 3ic5_A           71 DAVISAAP   78 (118)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999986

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.91  E-value=2.7e-09  Score=88.44  Aligned_cols=83  Identities=13%  Similarity=0.179  Sum_probs=61.4

Q ss_pred             CCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHH
Q 022335           13 KGKVALITGG----------------GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE   76 (299)
Q Consensus        13 ~~k~vlItGa----------------s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~   76 (299)
                      +||++|||||                ||++|.++|++|+++|++|++++|+... +.      .....+.++  |+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~------~~~~~~~~~--~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP------EPHPNLSIR--EIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC------CCCTTEEEE--ECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc------cCCCCeEEE--EHh---
Confidence            4899999999                7889999999999999999999997531 00      001223333  333   


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCCCCCCC
Q 022335           77 HAKKVVESTFEHFGKLDILVNAAAGNFLVSA  107 (299)
Q Consensus        77 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~  107 (299)
                      +++++++.+.+.++++|++|+||++....+.
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD~~p~  100 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSDYTPV  100 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCSEEEE
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCccccccch
Confidence            5666777777788999999999998654443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.87  E-value=1.6e-09  Score=85.13  Aligned_cols=77  Identities=19%  Similarity=0.148  Sum_probs=65.7

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEeCChhHHH---HHHHHHHhcCCcEEEEEcCCCCH--HHHHHHHHHHHHHcCCccEEEEc
Q 022335           24 SGIGFEISTQFGKHGASVAIMGRRKQVLD---AAVSALRSLGIKAVGFEGDVRRQ--EHAKKVVESTFEHFGKLDILVNA   98 (299)
Q Consensus        24 ~giG~aia~~la~~G~~Vv~~~r~~~~~~---~~~~~~~~~~~~v~~~~~Dl~~~--~~v~~~~~~~~~~~g~id~lv~~   98 (299)
                      +-++.+++..|++.|++|++..|+....+   ...+.+.+.+.++..+++|++++  ++++++++.+.+.+|+ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            45779999999999999999988765432   24556667788899999999999  9999999999998999 999999


Q ss_pred             CCC
Q 022335           99 AAG  101 (299)
Q Consensus        99 ag~  101 (299)
                      +|+
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            995

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.80  E-value=4.4e-08  Score=88.77  Aligned_cols=81  Identities=15%  Similarity=0.190  Sum_probs=71.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcC---CeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           15 KVALITGGGSGIGFEISTQFGKHG---ASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G---~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++++|+|| |+||+++++.|+++|   ..|++++|+.++++++.+++...+ .++..+.+|+++.++++++++..     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 899999999999998   489999999999999988886542 46888999999999999998865     


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|+||||++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.62  E-value=6.5e-08  Score=88.76  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=63.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++++++|+| +|++|+++++.|++.|++|++++|+.++++.+.+++    .++..+.+|+++.+++.++++       ++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~   69 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH   69 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CC
Confidence            478899998 799999999999999999999999987665543322    247788999999988877664       79


Q ss_pred             cEEEEcCCCC
Q 022335           93 DILVNAAAGN  102 (299)
Q Consensus        93 d~lv~~ag~~  102 (299)
                      |+|||+++..
T Consensus        70 DvVIn~a~~~   79 (450)
T 1ff9_A           70 DLVISLIPYT   79 (450)
T ss_dssp             SEEEECCC--
T ss_pred             cEEEECCccc
Confidence            9999999853

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.60  E-value=6.2e-08  Score=86.73  Aligned_cols=78  Identities=21%  Similarity=0.211  Sum_probs=61.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.+++++|+|+ |+||+++++.+...|++|+++++++++++...+.+   +..   +.+|.++.+++++.+.       
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~-------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ-------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence            578999999999 99999999999999999999999988766654333   333   3457778887776654       


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      +.|++|++++..
T Consensus       229 ~~DvVi~~~g~~  240 (369)
T 2eez_A          229 HADLLIGAVLVP  240 (369)
T ss_dssp             HCSEEEECCC--
T ss_pred             CCCEEEECCCCC
Confidence            589999999854

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.60  E-value=1.2e-07  Score=77.09  Aligned_cols=79  Identities=23%  Similarity=0.300  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|++++||||++|||++++..+...|++|+++++++++.+..    ++.+...   .+|.++.+..+.+.+...  .+++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~--~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELTD--GYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHhC--CCCC
Confidence            489999999999999999999999999999999998765443    2334332   246666554444333221  1369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+|+|
T Consensus       109 D~vi~~~g  116 (198)
T 1pqw_A          109 DVVLNSLA  116 (198)
T ss_dssp             EEEEECCC
T ss_pred             eEEEECCc
Confidence            99999987

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.60  E-value=1.1e-08  Score=95.65  Aligned_cols=99  Identities=20%  Similarity=0.223  Sum_probs=66.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++|||| ||+|++++..|+++|++|++++|+.++++++.+++   +.++..+. |+      +++      ..+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~---~~~~~~~~-dl------~~~------~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI---GGKALSLT-DL------DNY------HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT---TC-CEETT-TT------TTC--------C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCceeeHH-Hh------hhc------ccc
Confidence            467999999999 59999999999999999999999998888777665   22222111 21      100      113


Q ss_pred             CccEEEEcCCCCCC-----CCCCCCCHHHHHHHHHhhhHHH
Q 022335           91 KLDILVNAAAGNFL-----VSAEDLSPNGFRTVMDIDSVGT  126 (299)
Q Consensus        91 ~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~  126 (299)
                      .+|+||||+|+...     .++.+...++|..++++|+.+.
T Consensus       424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            58999999997432     3455556677788889998765

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.59  E-value=1.7e-08  Score=87.25  Aligned_cols=81  Identities=21%  Similarity=0.245  Sum_probs=60.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|+++|||++ |+|++++..|+++| +|++++|+.++++++.+++.........+.+|+++.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            4679999999997 99999999999999 999999999988888877754210000112333331          23467


Q ss_pred             CccEEEEcCCCCC
Q 022335           91 KLDILVNAAAGNF  103 (299)
Q Consensus        91 ~id~lv~~ag~~~  103 (299)
                      ++|+||||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999654

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.55  E-value=1.5e-07  Score=82.89  Aligned_cols=79  Identities=10%  Similarity=0.178  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++|||||+||||.+++..+.+.|++|+++++++++++.+ ++   .+...   .+|.++.+++.+.+.++..  +++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~---~g~~~---~~d~~~~~~~~~~~~~~~~--~~~  215 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQ---IGFDA---AFNYKTVNSLEEALKKASP--DGY  215 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSE---EEETTSCSCHHHHHHHHCT--TCE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hh---cCCcE---EEecCCHHHHHHHHHHHhC--CCC
Confidence            489999999999999999999999999999999998776654 33   33332   2477664445555544433  589


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+|+|
T Consensus       216 d~vi~~~g  223 (333)
T 1v3u_A          216 DCYFDNVG  223 (333)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.55  E-value=7e-07  Score=77.76  Aligned_cols=82  Identities=24%  Similarity=0.288  Sum_probs=64.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCC---hhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR---KQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~---~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .++||++||+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++... +.++.  ..++.+.+++.+.+.  
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~--~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQ--LFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHHH--
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceE--EeccchHHHHHhhhc--
Confidence            578999999998 7999999999999999 79999999   88888888888654 33343  345666666555444  


Q ss_pred             HHHcCCccEEEEcCCCC
Q 022335           86 FEHFGKLDILVNAAAGN  102 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~  102 (299)
                           ..|+|||+....
T Consensus       226 -----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 -----ESVIFTNATGVG  237 (315)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----CCCEEEECccCC
Confidence                 689999988643

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.51  E-value=3e-10  Score=103.76  Aligned_cols=44  Identities=25%  Similarity=0.363  Sum_probs=39.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAV   55 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~   55 (299)
                      .+.||+++|||++ +||+++|+.|++.|++|+++++++...+...
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4789999999998 9999999999999999999999987655543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.49  E-value=4.1e-07  Score=83.69  Aligned_cols=79  Identities=15%  Similarity=0.154  Sum_probs=63.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|+|+ |++|++++..|++. |++|++++|+.++++++.+.     ..+.++.+|+++.+++.++++      
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~------   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA------   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc------
Confidence            467889999998 99999999999998 78899999998877765543     135677899999988877765      


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                       ++|+|||+++..
T Consensus        88 -~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -DNDVVISLIPYT   99 (467)
T ss_dssp             -TSSEEEECSCGG
T ss_pred             -CCCEEEECCchh
Confidence             689999999853

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.45  E-value=8.3e-07  Score=67.95  Aligned_cols=75  Identities=8%  Similarity=0.138  Sum_probs=59.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .++.++|+|+ |.+|+.+++.|.++|++|++++++++..+...+    .  .+.++..|.++++.++++      ...+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~~~~   71 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DLEGV   71 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CCTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------CcccC
Confidence            3567999998 779999999999999999999999877665433    2  267788999999886654      22478


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|.+.+
T Consensus        72 d~vi~~~~   79 (141)
T 3llv_A           72 SAVLITGS   79 (141)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEecC
Confidence            99998876

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.41  E-value=9.3e-07  Score=75.63  Aligned_cols=77  Identities=16%  Similarity=0.210  Sum_probs=59.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++++++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...+ .+.  ..|+   +++       .+  +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~--~  179 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG--H  179 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT--C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc--C
Confidence            467999999998 699999999999999999999999998888877764322 232  2333   111       11  5


Q ss_pred             CccEEEEcCCCCC
Q 022335           91 KLDILVNAAAGNF  103 (299)
Q Consensus        91 ~id~lv~~ag~~~  103 (299)
                      ++|+|||+++...
T Consensus       180 ~~DivVn~t~~~~  192 (271)
T 1nyt_A          180 EFDLIINATSSGI  192 (271)
T ss_dssp             CCSEEEECCSCGG
T ss_pred             CCCEEEECCCCCC
Confidence            8999999998654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.39  E-value=3.2e-07  Score=70.14  Aligned_cols=76  Identities=13%  Similarity=0.186  Sum_probs=57.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +++++++|+|+ |++|..+++.|.+.|++|++++++++..+.+    .+.+  ..++.+|.++.+.++++      ...+
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~~~   70 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GIRN   70 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TGGG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CCCC
Confidence            45778999998 9999999999999999999999987654432    2222  35678899987665443      1347


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      .|++|++++
T Consensus        71 ~d~vi~~~~   79 (144)
T 2hmt_A           71 FEYVIVAIG   79 (144)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999987

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.36  E-value=1.1e-06  Score=77.89  Aligned_cols=79  Identities=16%  Similarity=0.135  Sum_probs=60.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+|++|+||++++..+...|++|+++++++++++..    ++.+.+.   .+|.++.+++.+.+.++...  ++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~~~--~~  239 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----RSIGGEV---FIDFTKEKDIVGAVLKATDG--GA  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----HHTTCCE---EEETTTCSCHHHHHHHHHTS--CE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----HHcCCce---EEecCccHhHHHHHHHHhCC--CC
Confidence            489999999999999999999999999999999988766433    2334332   23777555566656555432  79


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+++|
T Consensus       240 D~vi~~~g  247 (347)
T 2hcy_A          240 HGVINVSV  247 (347)
T ss_dssp             EEEEECSS
T ss_pred             CEEEECCC
Confidence            99999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.31  E-value=3e-06  Score=72.80  Aligned_cols=80  Identities=18%  Similarity=0.185  Sum_probs=60.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++......+.+...++.+   +.+.+.      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh------
Confidence            578999999998 7999999999999999 69999999999999988887543222333334333   233333      


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                       ..|+|||+...
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             47999998864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.29  E-value=9.6e-07  Score=78.11  Aligned_cols=80  Identities=13%  Similarity=0.236  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+|++|+||.+++..+...|++|+++++++++++.+.+   +.+....   +|.++.+++.+.+.++..  +++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~~~~---~d~~~~~~~~~~~~~~~~--~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGFDDA---FNYKEESDLTAALKRCFP--NGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCCSEE---EETTSCSCSHHHHHHHCT--TCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCceE---EecCCHHHHHHHHHHHhC--CCC
Confidence            48999999999999999999999999999999999877665432   2343322   365554344444444322  579


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+|+|
T Consensus       227 d~vi~~~g  234 (345)
T 2j3h_A          227 DIYFENVG  234 (345)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.28  E-value=1.7e-06  Score=75.98  Aligned_cols=79  Identities=15%  Similarity=0.123  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|+||.+++..+...|++|+++++++++++.+.+    .+.+.   .+|.++.+..+++.+...  ..++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQ---VINYREEDLVERLKEITG--GKKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCE---EEECCCccHHHHHHHHhC--CCCc
Confidence            48999999999999999999999999999999999877665433    23332   236555444444333221  1369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+|+|
T Consensus       211 D~vi~~~g  218 (327)
T 1qor_A          211 RVVYDSVG  218 (327)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCc
Confidence            99999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.28  E-value=2e-06  Score=75.71  Aligned_cols=80  Identities=21%  Similarity=0.221  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|+||.+++..+...|++|+++++++++++.+.+    .+.+.   .+|.++.+..+++.+.. . ..++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~~~---~~d~~~~~~~~~i~~~~-~-~~~~  215 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGCHH---TINYSTQDFAEVVREIT-G-GKGV  215 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHH-T-TCCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCE---EEECCCHHHHHHHHHHh-C-CCCC
Confidence            48999999999999999999999999999999999877665432    23332   23655544444333322 1 1369


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |++|+|+|.
T Consensus       216 d~vi~~~g~  224 (333)
T 1wly_A          216 DVVYDSIGK  224 (333)
T ss_dssp             EEEEECSCT
T ss_pred             eEEEECCcH
Confidence            999999983

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.21  E-value=3.5e-06  Score=77.22  Aligned_cols=84  Identities=23%  Similarity=0.258  Sum_probs=61.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEE--cCCC---------CHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE--GDVR---------RQEHAKKV   81 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~--~Dl~---------~~~~v~~~   81 (299)
                      .|+++||+|++|+||.+++..+...|++|+++++++++++.+    ++.+.+..+..  .|+.         +.++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCCEEEecccccccccccccccccchhhhHH
Confidence            589999999999999999998888999999999988776554    33454433222  2221         23455566


Q ss_pred             HHHHHHHcC-CccEEEEcCC
Q 022335           82 VESTFEHFG-KLDILVNAAA  100 (299)
Q Consensus        82 ~~~~~~~~g-~id~lv~~ag  100 (299)
                      .+.+.+..+ ++|++|+++|
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHhCCCceEEEECCC
Confidence            666666554 6999999998

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.21  E-value=1.1e-05  Score=68.87  Aligned_cols=77  Identities=12%  Similarity=0.194  Sum_probs=58.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ ++..  +|+   +++.       +  +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~-------~--~  179 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP-------L--Q  179 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC-------C--S
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhc-------c--C
Confidence            467999999998 799999999999999999999999999888888775432 2332  232   1110       1  4


Q ss_pred             CccEEEEcCCCCC
Q 022335           91 KLDILVNAAAGNF  103 (299)
Q Consensus        91 ~id~lv~~ag~~~  103 (299)
                      ..|+|||+++...
T Consensus       180 ~~DivIn~t~~~~  192 (272)
T 1p77_A          180 TYDLVINATSAGL  192 (272)
T ss_dssp             CCSEEEECCCC--
T ss_pred             CCCEEEECCCCCC
Confidence            7999999998653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.20  E-value=1.2e-05  Score=69.93  Aligned_cols=82  Identities=18%  Similarity=0.231  Sum_probs=61.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCC---hhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR---KQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~---~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .+++|++||+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++... +..+..+  ++.+.+...+.+.  
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~--~~~~l~~~~~~l~--  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVT--DLADQHAFTEALA--  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEE--ETTCHHHHHHHHH--
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEe--chHhhhhhHhhcc--
Confidence            567999999998 8999999999999999 79999999   88888888888653 3334433  4445433233232  


Q ss_pred             HHHcCCccEEEEcCCCC
Q 022335           86 FEHFGKLDILVNAAAGN  102 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~  102 (299)
                           ..|+|||+....
T Consensus       220 -----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -----SADILTNGTKVG  231 (312)
T ss_dssp             -----HCSEEEECSSTT
T ss_pred             -----CceEEEECCcCC
Confidence                 479999987653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.19  E-value=4.4e-06  Score=74.13  Aligned_cols=79  Identities=15%  Similarity=0.182  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+|++|+||.+++..+...|++|+++++++++++..    ++.+.+.   .+|.++.+..+++.+.. . ..++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~---~~d~~~~~~~~~~~~~~-~-~~~~  240 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHE---VFNHREVNYIDKIKKYV-G-EKGI  240 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSE---EEETTSTTHHHHHHHHH-C-TTCE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHcCCCE---EEeCCCchHHHHHHHHc-C-CCCc
Confidence            489999999999999999999999999999999998776632    3334332   23555544333332221 1 1279


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+|+|
T Consensus       241 D~vi~~~G  248 (351)
T 1yb5_A          241 DIIIEMLA  248 (351)
T ss_dssp             EEEEESCH
T ss_pred             EEEEECCC
Confidence            99999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.17  E-value=3.6e-06  Score=74.72  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|+||.+++..+...|++|+++++++++++.+ +++   +.+.   .+|.++.+.++++.+.. . .+++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~-~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEATLKFT-K-GAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHHHHHT-T-TSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHHHHHh-c-CCCc
Confidence            489999999999999999999999999999999998776655 333   3332   23555544333332211 1 1369


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+|+|
T Consensus       233 d~vi~~~G  240 (354)
T 2j8z_A          233 NLILDCIG  240 (354)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.16  E-value=2.6e-06  Score=75.05  Aligned_cols=79  Identities=15%  Similarity=0.231  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+|++|+||.+++..+...|++|+++++++++++.+.++   .+....   .|.++.+-.+.+.+ ..  .+++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~~~-~~--~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFDGA---IDYKNEDLAAGLKR-EC--PKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCSEE---EETTTSCHHHHHHH-HC--TTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCCEE---EECCCHHHHHHHHH-hc--CCCc
Confidence            489999999999999999999999999999999998776654333   343322   35444333333222 21  2479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+|+|
T Consensus       220 d~vi~~~g  227 (336)
T 4b7c_A          220 DVFFDNVG  227 (336)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.16  E-value=2.2e-06  Score=76.17  Aligned_cols=77  Identities=14%  Similarity=0.175  Sum_probs=55.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++||+||+|+||.+++..+...|+ +|+++++++++++.+.++   .+...   .+|.++.+..+. +.+...  +++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~~---~~d~~~~~~~~~-~~~~~~--~~~d  232 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFDA---AINYKKDNVAEQ-LRESCP--AGVD  232 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCSE---EEETTTSCHHHH-HHHHCT--TCEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCce---EEecCchHHHHH-HHHhcC--CCCC
Confidence            8999999999999999999999999 999999998766654332   34332   246555332222 222221  3799


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      ++|+|+|
T Consensus       233 ~vi~~~G  239 (357)
T 2zb4_A          233 VYFDNVG  239 (357)
T ss_dssp             EEEESCC
T ss_pred             EEEECCC
Confidence            9999998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.10  E-value=2.1e-05  Score=60.90  Aligned_cols=77  Identities=16%  Similarity=0.211  Sum_probs=59.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .+.++|+|+ |.+|+.+++.|.+.|++|++++++ ++..+.+.+..   ...+.++..|.++++.+++.      ...+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~~a   72 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GIDRC   72 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTTTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------ChhhC
Confidence            567889986 999999999999999999999997 45444444322   23478889999998876554      12378


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99998875

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.10  E-value=9.3e-06  Score=71.37  Aligned_cols=151  Identities=7%  Similarity=0.057  Sum_probs=94.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCC----hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-------SVAIMGRR----KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      .++++||||+|.+|..++..|+.+|.       .|++++++    +++++....++.+....+.   .|++..++..+. 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a-   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA-   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH-
Confidence            35799999999999999999999886       79999998    6656666666655321111   233332333333 


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc--
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH--  160 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~--  160 (299)
                            +.+.|+||+.||.....   ..+..   +.+..|+.....+++.+..+-   ++      .++||++|+-..  
T Consensus        81 ------l~~aD~Vi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~~~~---~p------~a~ii~~SNPv~~~  139 (329)
T 1b8p_A           81 ------FKDADVALLVGARPRGP---GMERK---DLLEANAQIFTVQGKAIDAVA---SR------NIKVLVVGNPANTN  139 (329)
T ss_dssp             ------TTTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHHS---CT------TCEEEECSSSHHHH
T ss_pred             ------hCCCCEEEEeCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHhc---CC------CeEEEEccCchHHH
Confidence                  33789999999965321   22322   456778777776666665431   11      578999886221  


Q ss_pred             ------cc-cCCCchHHHHHHHHHHHHHHHHHHHhc
Q 022335          161 ------YT-ASWYQIHVAAAKAAVDAITRNLALEWG  189 (299)
Q Consensus       161 ------~~-~~~~~~~Y~~sKaal~~l~~~la~e~~  189 (299)
                            .. +++..-.|+.++.--..+...++..++
T Consensus       140 t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          140 AYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence                  11 233333466666555566667777764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.07  E-value=2.1e-05  Score=59.51  Aligned_cols=75  Identities=15%  Similarity=0.377  Sum_probs=56.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.+.   .  .+.++..|.++.+.+.+.      ...+.|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~--~~~~~~~d~~~~~~l~~~------~~~~~d   71 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDA------GIEDAD   71 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c--CcEEEEcCCCCHHHHHHc------CcccCC
Confidence            457999987 9999999999999999999999998766554322   1  255678898887765331      134789


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      ++|.+.+
T Consensus        72 ~vi~~~~   78 (140)
T 1lss_A           72 MYIAVTG   78 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEeeC
Confidence            9999975

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.06  E-value=1.2e-05  Score=71.06  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|+++||+|++++||.+++..+... |++|+++++++++++.+. +   .+.+..   .|.++.+..+++ .++... ++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~---~g~~~~---~~~~~~~~~~~~-~~~~~~-~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-R---AGADYV---INASMQDPLAEI-RRITES-KG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-H---HTCSEE---EETTTSCHHHHH-HHHTTT-SC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCCEE---ecCCCccHHHHH-HHHhcC-CC
Confidence            4899999999999999999999999 999999999987766542 2   343322   244443332222 222111 58


Q ss_pred             ccEEEEcCCC
Q 022335           92 LDILVNAAAG  101 (299)
Q Consensus        92 id~lv~~ag~  101 (299)
                      +|++|+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999983

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.04  E-value=9.2e-06  Score=72.42  Aligned_cols=76  Identities=18%  Similarity=0.302  Sum_probs=53.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK---QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .++|+++||+|+ |++|..++..+...|++|+++++++   ++.+.+ .   +.+.+  .+  | ++  ++.+.+.+ ..
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~---~~ga~--~v--~-~~--~~~~~~~~-~~  244 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-E---ETKTN--YY--N-SS--NGYDKLKD-SV  244 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-H---HHTCE--EE--E-CT--TCSHHHHH-HH
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-H---HhCCc--ee--c-hH--HHHHHHHH-hC
Confidence            455999999999 9999999999888999999999987   665432 2   23432  22  5 44  22222222 22


Q ss_pred             HcCCccEEEEcCCC
Q 022335           88 HFGKLDILVNAAAG  101 (299)
Q Consensus        88 ~~g~id~lv~~ag~  101 (299)
                        +++|++|+++|.
T Consensus       245 --~~~d~vid~~g~  256 (366)
T 2cdc_A          245 --GKFDVIIDATGA  256 (366)
T ss_dssp             --CCEEEEEECCCC
T ss_pred             --CCCCEEEECCCC
Confidence              689999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.00  E-value=1.4e-05  Score=70.87  Aligned_cols=78  Identities=26%  Similarity=0.290  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|+||.+++..+...|++|+++++++++++.+.+    .+.+..   .|.++.+-.+.+.+ ..  .+++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~---~~~~~~~~~~~~~~-~~--~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAKRG---INYRSEDFAAVIKA-ET--GQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEE---EETTTSCHHHHHHH-HH--SSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEE---EeCCchHHHHHHHH-Hh--CCCc
Confidence            48999999999999999999999999999999999887665432    343322   24444333333322 22  3579


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+++|
T Consensus       237 Dvvid~~g  244 (353)
T 4dup_A          237 DIILDMIG  244 (353)
T ss_dssp             EEEEESCC
T ss_pred             eEEEECCC
Confidence            99999998

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.99  E-value=0.00013  Score=63.98  Aligned_cols=103  Identities=14%  Similarity=0.218  Sum_probs=67.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGI--KAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+++||||+|.+|..++..|+++|  ..|++++++++  +....++.+...  ++..    ++..++.++.+.      
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~------   75 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT------   75 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT------
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC------
Confidence            3579999999999999999999998  78999998876  333444544322  2222    233445444433      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALK  135 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  135 (299)
                       +.|++|+++|......   .+..   +.+..|+.....+.+.+..
T Consensus        76 -gaDvVi~~ag~~~~~g---~~r~---dl~~~N~~~~~~i~~~i~~  114 (326)
T 1smk_A           76 -GMDLIIVPAGVPRKPG---MTRD---DLFKINAGIVKTLCEGIAK  114 (326)
T ss_dssp             -TCSEEEECCCCCCCSS---CCCS---HHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCEEEEcCCcCCCCC---CCHH---HHHHHHHHHHHHHHHHHHh
Confidence             7899999999653221   1112   3467787777777666654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.97  E-value=1.4e-05  Score=69.07  Aligned_cols=78  Identities=18%  Similarity=0.177  Sum_probs=57.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++.....+       +.+.+++       .+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~-------~~~~~~~-------~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSA-------YFSLAEA-------ETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCC-------EECHHHH-------HHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCc-------eeeHHHH-------Hhhh
Confidence            467999999998 7899999999999998 8999999998888877665221111       1122222       2234


Q ss_pred             CCccEEEEcCCCCC
Q 022335           90 GKLDILVNAAAGNF  103 (299)
Q Consensus        90 g~id~lv~~ag~~~  103 (299)
                      ...|+|||+.+...
T Consensus       203 ~~aDivIn~t~~~~  216 (297)
T 2egg_A          203 AEYDIIINTTSVGM  216 (297)
T ss_dssp             GGCSEEEECSCTTC
T ss_pred             ccCCEEEECCCCCC
Confidence            57899999998643

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.94  E-value=3.6e-05  Score=68.61  Aligned_cols=76  Identities=20%  Similarity=0.288  Sum_probs=57.6

Q ss_pred             CCCCCC--EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGK--VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k--~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+++||  +|+|.|| |++|+.+++.|++ ..+|.+++++.+.++...       ..+..+.+|++|.+++.+++.    
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~----   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK----   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT----
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh----
Confidence            344444  6999998 9999999998865 578999999987766542       235668899999999888776    


Q ss_pred             HcCCccEEEEcCCC
Q 022335           88 HFGKLDILVNAAAG  101 (299)
Q Consensus        88 ~~g~id~lv~~ag~  101 (299)
                         +.|+||++++.
T Consensus        77 ---~~DvVi~~~p~   87 (365)
T 3abi_A           77 ---EFELVIGALPG   87 (365)
T ss_dssp             ---TCSEEEECCCG
T ss_pred             ---CCCEEEEecCC
Confidence               68999999874

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.94  E-value=5.1e-05  Score=64.98  Aligned_cols=75  Identities=16%  Similarity=0.295  Sum_probs=58.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++...+ .+.....+     ++.          
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~-----~l~----------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE-----QLK----------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG-----GCC----------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH-----Hhc----------
Confidence            467999999998 6999999999999996 89999999999999888886543 34444332     110          


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      ...|+|||+....
T Consensus       186 ~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 QSYDVIINSTSAS  198 (281)
T ss_dssp             SCEEEEEECSCCC
T ss_pred             CCCCEEEEcCcCC
Confidence            3789999988643

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.91  E-value=3.2e-05  Score=68.26  Aligned_cols=79  Identities=22%  Similarity=0.199  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+|++|++|.+++..+...|++|+++++++++++.+. +   .+.+. +  +|.++.+- .+.+.++.. ..++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~---~ga~~-~--~d~~~~~~-~~~~~~~~~-~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-A---LGADE-T--VNYTHPDW-PKEVRRLTG-GKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---HTCSE-E--EETTSTTH-HHHHHHHTT-TTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCE-E--EcCCcccH-HHHHHHHhC-CCCc
Confidence            4899999999999999999999999999999999988766553 2   33332 2  36555432 222222211 1379


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+++|
T Consensus       237 d~vi~~~g  244 (343)
T 2eih_A          237 DKVVDHTG  244 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.90  E-value=4.1e-05  Score=65.29  Aligned_cols=74  Identities=20%  Similarity=0.179  Sum_probs=57.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++..  .++..+..+  +   +.       .  
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~~~--~---l~-------~--  179 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISRYE--A---LE-------G--  179 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEECSG--G---GT-------T--
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEeeHH--H---hc-------c--
Confidence            578999999998 6999999999999996 899999999999998887754  234444322  1   11       0  


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      ...|+|||+...
T Consensus       180 ~~~DivInaTp~  191 (272)
T 3pwz_A          180 QSFDIVVNATSA  191 (272)
T ss_dssp             CCCSEEEECSSG
T ss_pred             cCCCEEEECCCC
Confidence            378999998764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.88  E-value=1.9e-05  Score=69.22  Aligned_cols=78  Identities=18%  Similarity=0.169  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      .|+++||+||+|++|.+++..+...|++|+++++++++++.+.    +.+.+..   .|.++.+-.+    .+.+..  .
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~~~~----~~~~~~~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK----ALGAWET---IDYSHEDVAK----RVLELTDGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHH----HHHHHTTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCCccHHH----HHHHHhCCC
Confidence            4899999999999999999998899999999999988766543    2343322   2444433222    233322  3


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|+++|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            79999999983

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.87  E-value=6.6e-05  Score=66.76  Aligned_cols=78  Identities=21%  Similarity=0.189  Sum_probs=58.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++++++|+|+ |++|++++..+...|++|++++|++++++.+.+....   .+..+   ..+.+++.+.+.       
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~~---~~~~~~~~~~~~-------  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVELL---YSNSAEIETAVA-------  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEEE---ECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEee---eCCHHHHHHHHc-------
Confidence            367899999999 9999999999999999999999999887776554422   22222   234444443332       


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      +.|++|++++..
T Consensus       230 ~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 EADLLIGAVLVP  241 (361)
T ss_dssp             TCSEEEECCCCT
T ss_pred             CCCEEEECCCcC
Confidence            789999999864

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.86  E-value=3.7e-05  Score=67.56  Aligned_cols=78  Identities=14%  Similarity=0.292  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      .|+++||+||+|+||.+++..+...|++|+++++++++++..    ++.+.+..   .|.++.+..+    .+.+..  .
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~---~~~~~~~~~~----~~~~~~~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA----KEYGAEYL---INASKEDILR----QVLKFTNGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCcEE---EeCCCchHHH----HHHHHhCCC
Confidence            489999999999999999999889999999999998776643    23443332   2333332222    222222  3


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++++++|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999983

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.85  E-value=7.7e-05  Score=68.45  Aligned_cols=84  Identities=20%  Similarity=0.225  Sum_probs=63.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEE--cC--------CCCHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE--GD--------VRRQEHAKKVV   82 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~--~D--------l~~~~~v~~~~   82 (299)
                      .|.+|||+|++|++|...+..+...|++|+++++++++++.+    ++.+.+..+-.  .|        ..+.++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~----~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC----RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH----HhhCCcEEEecCcCcccccccccccchHHHHHHH
Confidence            489999999999999999998888999999999988776654    23344332221  12        24667777788


Q ss_pred             HHHHHHcC--CccEEEEcCC
Q 022335           83 ESTFEHFG--KLDILVNAAA  100 (299)
Q Consensus        83 ~~~~~~~g--~id~lv~~ag  100 (299)
                      +.+.+..+  ++|++|.++|
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHhCCCCCcEEEEcCC
Confidence            88877653  7999999988

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.83  E-value=3.1e-05  Score=68.23  Aligned_cols=77  Identities=17%  Similarity=0.170  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      .|+++||+|+++++|.+++..+...|++|+++++++++++.+.+    .+.+..   .|.++.+-.+    .+.+..  .
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~~~---~~~~~~~~~~----~~~~~~~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAAYV---IDTSTAPLYE----TVMELTNGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCcEE---EeCCcccHHH----HHHHHhCCC
Confidence            48999999999999999999888899999999999887665433    343332   2444333222    222222  3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|++|+|+|
T Consensus       213 g~Dvvid~~g  222 (340)
T 3gms_A          213 GADAAIDSIG  222 (340)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.79  E-value=5.3e-05  Score=66.80  Aligned_cols=77  Identities=23%  Similarity=0.307  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C-
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G-   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g-   90 (299)
                      .|+++||+||+|+||.+++..+...|++|+++++++++.+.+.+    .+.+. ++..+    +++   .+.+.+.. + 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~-v~~~~----~~~---~~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGADI-VLPLE----EGW---AKAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSE-EEESS----TTH---HHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcE-EecCc----hhH---HHHHHHHhCCC
Confidence            48999999999999999999998999999999999887654432    34332 23322    222   23333333 2 


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|+++|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999983

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.76  E-value=0.00013  Score=61.41  Aligned_cols=81  Identities=16%  Similarity=0.287  Sum_probs=62.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK-------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|++++|+|.|+ ||+|..++..|++.|. ++.+++++.                   .+.+.+.+.+.+.+.  ++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            356889999996 6999999999999997 799999987                   788888888877543  46666


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..+++ .+.+.+++.       +.|+||.+..
T Consensus       107 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             eccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            76666 344444433       7899998864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.73  E-value=5.7e-05  Score=58.61  Aligned_cols=77  Identities=21%  Similarity=0.259  Sum_probs=56.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.+++++|+|+ |.+|..+++.|.+.|++|++++++++..+.+..   ..  ...++..|.++.+.+.+.      ...+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~------~~~~   84 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC------GMEK   84 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT------TGGG
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc------Cccc
Confidence            45788999996 999999999999999999999999876543210   12  245677888886654322      1236


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      .|++|.+.+
T Consensus        85 ad~Vi~~~~   93 (155)
T 2g1u_A           85 ADMVFAFTN   93 (155)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEEEeC
Confidence            899999876

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.73  E-value=9.9e-05  Score=66.01  Aligned_cols=78  Identities=12%  Similarity=0.135  Sum_probs=58.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.|++++|+|+ |+||+.+++.+...|++|+++++++++++.+.+.+   +..+.   ++.++.+++.+.+.       
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l~-------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAVK-------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHHc-------
Confidence            578999999999 99999999999999999999999988766654333   33322   23345555555443       


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      +.|++|++++..
T Consensus       231 ~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 RADLVIGAVLVP  242 (377)
T ss_dssp             HCSEEEECCCCT
T ss_pred             CCCEEEECCCcC
Confidence            589999998754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.71  E-value=0.00019  Score=63.37  Aligned_cols=78  Identities=17%  Similarity=0.223  Sum_probs=54.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++++||+||+|++|.+++..+...|++|+++++++++++.+.    +.+.+.. +  |.++.+-.+.+.+ .... .++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~-~--~~~~~~~~~~v~~-~~~~-~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAAHV-L--NEKAPDFEATLRE-VMKA-EQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCSEE-E--ETTSTTHHHHHHH-HHHH-HCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE-E--ECCcHHHHHHHHH-HhcC-CCCc
Confidence            489999999999999999988889999999999988766543    2343322 2  3333332222222 2211 2799


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      ++++++|
T Consensus       236 ~vid~~g  242 (349)
T 3pi7_A          236 IFLDAVT  242 (349)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.70  E-value=7.3e-05  Score=59.64  Aligned_cols=77  Identities=18%  Similarity=0.204  Sum_probs=58.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +.++.++|+|+ |.+|..+++.|.+. |++|++++++++..+.+    ...+  +.++..|.++++.++++     ....
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~g--~~~~~gd~~~~~~l~~~-----~~~~  104 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSEG--RNVISGDATDPDFWERI-----LDTG  104 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHTT--CCEEECCTTCHHHHHTB-----CSCC
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHCC--CCEEEcCCCCHHHHHhc-----cCCC
Confidence            55777889984 99999999999999 99999999998766553    3333  45677899988765432     0124


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      +.|.+|.+.+
T Consensus       105 ~ad~vi~~~~  114 (183)
T 3c85_A          105 HVKLVLLAMP  114 (183)
T ss_dssp             CCCEEEECCS
T ss_pred             CCCEEEEeCC
Confidence            7899998875

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.70  E-value=0.00023  Score=61.93  Aligned_cols=104  Identities=10%  Similarity=0.094  Sum_probs=67.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeC--ChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGR--RKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r--~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +++||||+|.+|..++..|+.+|.  .++++++  ++++++....++.+.    +.++.+...|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            599999999999999999998875  5888998  766555544444332    1223332211    11112       


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY  136 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  136 (299)
                      .+.+.|+|||.||.....   ..+.   .+.+..|+..+..+++++..+
T Consensus        71 al~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~  113 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAEI  113 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHHh
Confidence            234799999999964321   2222   345888988888887777654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.68  E-value=0.00013  Score=64.92  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=54.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|++|..++..+...|++|+++++++++++.+.    +.+.+.. +  |.++. ++.+.+.+..  -+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~-~--~~~~~-~~~~~~~~~~--~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----SLGCDRP-I--NYKTE-PVGTVLKQEY--PEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE-E--ETTTS-CHHHHHHHHC--TTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HcCCcEE-E--ecCCh-hHHHHHHHhc--CCCC
Confidence            4899999999999999999998899999999999987665543    3444322 2  33332 2222222221  1479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|+++|
T Consensus       233 D~vid~~g  240 (362)
T 2c0c_A          233 DVVYESVG  240 (362)
T ss_dssp             EEEEECSC
T ss_pred             CEEEECCC
Confidence            99999998

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.68  E-value=5.6e-05  Score=67.34  Aligned_cols=75  Identities=21%  Similarity=0.277  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|+ |++|..++..+...|++|+++++++++.+...+   +.+.+. +  .|..+.+.+++       ..+++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~-v--~~~~~~~~~~~-------~~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGADS-F--LVSRDQEQMQA-------AAGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCSE-E--EETTCHHHHHH-------TTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCce-E--EeccCHHHHHH-------hhCCC
Confidence            5899999996 999999999888899999999999877655432   334332 2  25555443322       23589


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |++|+++|.
T Consensus       253 D~vid~~g~  261 (366)
T 1yqd_A          253 DGIIDTVSA  261 (366)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCc
Confidence            999999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.67  E-value=0.00031  Score=53.40  Aligned_cols=73  Identities=12%  Similarity=0.162  Sum_probs=57.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +.++|.|+ |.+|..+++.|.++|++|++++++++..+.+.    +.  .+.++..|.++++.++++      ...+.|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~--g~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ER--GVRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT--TCEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----Hc--CCCEEECCCCCHHHHHhc------CcccCCE
Confidence            45788887 88999999999999999999999998766543    22  366789999999876553      1236899


Q ss_pred             EEEcCC
Q 022335           95 LVNAAA  100 (299)
Q Consensus        95 lv~~ag  100 (299)
                      +|.+.+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            998865

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.66  E-value=0.00023  Score=62.58  Aligned_cols=77  Identities=21%  Similarity=0.243  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+|+ |++|..++..+...|++|+++++++++++.+.    +.+.+.   .+|.++.+ +.+.+.++.   +++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~---~~d~~~~~-~~~~~~~~~---~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----ELGADL---VVNPLKED-AAKFMKEKV---GGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTCSE---EECTTTSC-HHHHHHHHH---SSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HCCCCE---EecCCCcc-HHHHHHHHh---CCC
Confidence            4889999999 88999999988889999999999987766542    344332   23655432 222222222   689


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |++|+++|.
T Consensus       232 d~vid~~g~  240 (339)
T 1rjw_A          232 HAAVVTAVS  240 (339)
T ss_dssp             EEEEESSCC
T ss_pred             CEEEECCCC
Confidence            999999983

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.66  E-value=0.00046  Score=59.74  Aligned_cols=99  Identities=6%  Similarity=-0.070  Sum_probs=65.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeC--ChhHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGR--RKQVLDAAVSALRSL---GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r--~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +++||||+|.+|..++..|+.+|.  .++++++  ++++++....++.+.   ..++.+.. +  +.    +       .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~----~-------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY----E-------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG----G-------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH----H-------H
Confidence            699999999999999999998875  5888999  776666555555443   23344333 2  11    1       1


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL  134 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  134 (299)
                      +.+.|++|+.+|.....   ..+..   +.+..|+.....+.+.+.
T Consensus        68 ~~~aDvVi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~  107 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP---GQTRI---DLAGDNAPIMEDIQSSLD  107 (303)
T ss_dssp             GTTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHH
Confidence            34789999999964321   22322   347777776666655554

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.66  E-value=2.8e-05  Score=59.62  Aligned_cols=71  Identities=17%  Similarity=0.256  Sum_probs=53.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++++|+|+ |++|+.++..|.+.|++|++++|++++.+.+.+++.     ....  +..+.   .+.+.       ..|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~~--~~~~~---~~~~~-------~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEYV--LINDI---DSLIK-------NND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEEE--ECSCH---HHHHH-------TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----CceE--eecCH---HHHhc-------CCC
Confidence            889999997 999999999999999999999999988877766652     1212  22232   23333       689


Q ss_pred             EEEEcCCCC
Q 022335           94 ILVNAAAGN  102 (299)
Q Consensus        94 ~lv~~ag~~  102 (299)
                      ++|++.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999998743

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.65  E-value=0.00016  Score=59.46  Aligned_cols=73  Identities=19%  Similarity=0.306  Sum_probs=58.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      .++|+|+ |.+|..+++.|.++|++|++++++++..+.+.+..     .+.++..|.++++.+++.      ...+.|++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~v   69 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDVV   69 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence            4899996 99999999999999999999999998766654322     367789999998876654      12478999


Q ss_pred             EEcCC
Q 022335           96 VNAAA  100 (299)
Q Consensus        96 v~~ag  100 (299)
                      |.+.+
T Consensus        70 i~~~~   74 (218)
T 3l4b_C           70 VILTP   74 (218)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            98765

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.61  E-value=0.00094  Score=59.17  Aligned_cols=82  Identities=18%  Similarity=0.155  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.++||+|+ |++|...+..+...|++ |+++++++++++.+.+ +   ...+..+..|-.+.+++.+.+.+... -.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g  252 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I---CPEVVTHKVERLSAEESAKKIVESFG-GIE  252 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H---CTTCEEEECCSCCHHHHHHHHHHHTS-SCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---chhcccccccccchHHHHHHHHHHhC-CCC
Confidence            4889999998 99999998877788998 8899999887665443 3   22455556665566655444433221 137


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.+.|
T Consensus       253 ~Dvvid~~g  261 (363)
T 3m6i_A          253 PAVALECTG  261 (363)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999988

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.57  E-value=0.00025  Score=62.40  Aligned_cols=121  Identities=12%  Similarity=0.152  Sum_probs=73.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..++++++.|+|++|.+|..++..++.+|.  .|+++|.++++++....++.+..-.    ..++.-..+..+.      
T Consensus         4 ~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~a------   73 (343)
T 3fi9_A            4 SYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKEA------   73 (343)
T ss_dssp             CCSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHHH------
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHHH------
Confidence            356678899999999999999999999984  7999999998888877777653210    0111111111222      


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCce-EEEecc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGS-ILNISA  157 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~-iv~vsS  157 (299)
                       +..-|++|.++|....   ...+.   .+.+..|..    +++.+.+.+.+..+      .+. |+++|.
T Consensus        74 -l~dADvVvitaG~p~k---pG~~R---~dLl~~N~~----I~~~i~~~i~~~~p------~a~~vlvvsN  127 (343)
T 3fi9_A           74 -LTDAKYIVSSGGAPRK---EGMTR---EDLLKGNAE----IAAQLGKDIKSYCP------DCKHVIIIFN  127 (343)
T ss_dssp             -HTTEEEEEECCC----------CH---HHHHHHHHH----HHHHHHHHHHHHCT------TCCEEEECSS
T ss_pred             -hCCCCEEEEccCCCCC---CCCCH---HHHHHHHHH----HHHHHHHHHHHhcc------CcEEEEEecC
Confidence             2368999999996421   11222   234555554    44555555555542      464 566654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.57  E-value=0.00029  Score=62.08  Aligned_cols=76  Identities=17%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g~   91 (299)
                      .|+++||+||+|++|..++..+...|++|+++++++++++.+.+    .+.+.. +  |-.+  ++   .+.+.+.. ++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v-i--~~~~--~~---~~~~~~~~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGADIV-L--NHKE--SL---LNQFKTQGIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCSEE-E--CTTS--CH---HHHHHHHTCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEE-E--ECCc--cH---HHHHHHhCCCC
Confidence            58999999999999999999888899999999998877655433    343322 2  3222  22   22232322 47


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++++++|
T Consensus       218 ~Dvv~d~~g  226 (346)
T 3fbg_A          218 VDYVFCTFN  226 (346)
T ss_dssp             EEEEEESSC
T ss_pred             ccEEEECCC
Confidence            999999987

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.55  E-value=0.00021  Score=61.77  Aligned_cols=74  Identities=18%  Similarity=0.293  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+|++|++|..++..+...|++|+++++++++++...    +.+.+..   .|..+.+++   .+.+    +++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~ga~~~---~~~~~~~~~---~~~~----~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEA---ATYAEVPER---AKAW----GGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEE---EEGGGHHHH---HHHT----TSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hcCCCEE---EECCcchhH---HHHh----cCc
Confidence            4899999999999999999988889999999999887766542    3343322   244431222   2222    589


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |++|+ +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 883

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.54  E-value=0.00021  Score=63.00  Aligned_cols=77  Identities=18%  Similarity=0.214  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      .|+++||+|+ |++|..++..+...|+ +|+++++++++++...    +.+.+. +  .|..+.+ +   .+.+.+..  
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~~Ga~~-~--~~~~~~~-~---~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK----KVGADY-V--INPFEED-V---VKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH----HHTCSE-E--ECTTTSC-H---HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCE-E--ECCCCcC-H---HHHHHHHcCC
Confidence            6899999999 9999999998888999 8999999987655442    234322 2  2443322 2   22233322  


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      .++|++|+++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999983

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.51  E-value=0.00028  Score=63.72  Aligned_cols=73  Identities=19%  Similarity=0.298  Sum_probs=54.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+.|++++|+|+ |++|+.++..|...|+ +|++++|+.++.+++.+++   +.+  .  .+.   +++.+.+       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh-------
Confidence            467999999998 9999999999999999 8999999998776665554   322  2  122   2333333       


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      .+.|+||++.+.
T Consensus       226 ~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ARSDVVVSATAA  237 (404)
T ss_dssp             HTCSEEEECCSS
T ss_pred             cCCCEEEEccCC
Confidence            268999999863

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.47  E-value=0.0011  Score=56.29  Aligned_cols=66  Identities=24%  Similarity=0.344  Sum_probs=51.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++++|+|+ ||.|++++..|++.|.+|++++|+.++.+++. ++.     +.....  .+              ....|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~~~--~~--------------l~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCFME--PP--------------KSAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEESS--CC--------------SSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEecH--HH--------------hccCC
Confidence            899999997 89999999999999999999999999888877 542     232222  11              11689


Q ss_pred             EEEEcCCCC
Q 022335           94 ILVNAAAGN  102 (299)
Q Consensus        94 ~lv~~ag~~  102 (299)
                      +|||+....
T Consensus       175 iVInaTp~G  183 (269)
T 3phh_A          175 LIINATSAS  183 (269)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcccCC
Confidence            999987654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.46  E-value=0.00027  Score=62.30  Aligned_cols=76  Identities=25%  Similarity=0.340  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|++|.+++..+...|++|+++ +++++++.+    ++.+.+.    +| .+.+ +.+.+.+... -.++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~----~~lGa~~----i~-~~~~-~~~~~~~~~~-~~g~  217 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV----RDLGATP----ID-ASRE-PEDYAAEHTA-GQGF  217 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH----HHHTSEE----EE-TTSC-HHHHHHHHHT-TSCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH----HHcCCCE----ec-cCCC-HHHHHHHHhc-CCCc
Confidence            48999999999999999999988999999988 777665433    3344433    23 2222 2222222211 1379


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++++++|
T Consensus       218 D~vid~~g  225 (343)
T 3gaz_A          218 DLVYDTLG  225 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.46  E-value=0.00017  Score=63.48  Aligned_cols=76  Identities=20%  Similarity=0.196  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.++||+|+ |++|..++..+...|+ +|+++++++++++.+.+ +    .+ .+  .|..+. ++.+.+.++.  -.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~-~v--~~~~~~-~~~~~~~~~~--~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----AD-RL--VNPLEE-DLLEVVRRVT--GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CS-EE--ECTTTS-CHHHHHHHHH--SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HH-hc--cCcCcc-CHHHHHHHhc--CCC
Confidence            6899999999 9999999988888999 89999999876554322 1    11 12  244332 2333333332  347


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++|.++|
T Consensus       232 ~D~vid~~g  240 (343)
T 2dq4_A          232 VEVLLEFSG  240 (343)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999998

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.34  E-value=3.6e-05  Score=65.74  Aligned_cols=71  Identities=17%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+       ++...     ..++..+.       .
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-------~~~~~-----~~~~~~~~-------~  173 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-------NINKI-----NLSHAESH-------L  173 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-------CCEEE-----CHHHHHHT-------G
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------hcccc-----cHhhHHHH-------h
Confidence            467999999997 7999999999999999 79999999876554432       12221     22333222       3


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      ...|+|||+...
T Consensus       174 ~~aDiVInaTp~  185 (277)
T 3don_A          174 DEFDIIINTTPA  185 (277)
T ss_dssp             GGCSEEEECCC-
T ss_pred             cCCCEEEECccC
Confidence            368999998764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.33  E-value=0.00071  Score=60.28  Aligned_cols=76  Identities=22%  Similarity=0.353  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|++|..++..+...|++|++++ ++++.+.    +++.+.+.. +  |.++.+-.    +.+.+ .+++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~----~~~lGa~~v-~--~~~~~~~~----~~~~~-~~g~  249 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASEL----VRKLGADDV-I--DYKSGSVE----EQLKS-LKPF  249 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH----HHHTTCSEE-E--ETTSSCHH----HHHHT-SCCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHH----HHHcCCCEE-E--ECCchHHH----HHHhh-cCCC
Confidence            589999999999999999988888999998888 4444433    234454432 2  33332222    22222 3589


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |++|+++|.
T Consensus       250 D~vid~~g~  258 (375)
T 2vn8_A          250 DFILDNVGG  258 (375)
T ss_dssp             SEEEESSCT
T ss_pred             CEEEECCCC
Confidence            999999983

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.32  E-value=0.0033  Score=54.82  Aligned_cols=116  Identities=10%  Similarity=0.111  Sum_probs=71.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +.+++++.|+|+ |.+|..++..|+..|.  .|+++++++++++....++.+..   .++.+...|              
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------------   70 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------------   70 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------------
Confidence            345778999997 9999999999999987  79999999998888877776532   233333222              


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .+.+...|++|..+|.....   ..+.   .+.++.|.    -+++.+.+.+.+..+      .+.|+++|.
T Consensus        71 ~~a~~~aDiVvi~ag~~~kp---G~tR---~dL~~~N~----~I~~~i~~~i~~~~p------~a~ilvvtN  126 (326)
T 3vku_A           71 YSDAKDADLVVITAGAPQKP---GETR---LDLVNKNL----KILKSIVDPIVDSGF------NGIFLVAAN  126 (326)
T ss_dssp             GGGGTTCSEEEECCCCC--------------------------CHHHHHHHHHTTTC------CSEEEECSS
T ss_pred             HHHhcCCCEEEECCCCCCCC---CchH---HHHHHHHH----HHHHHHHHHHHhcCC------ceEEEEccC
Confidence            12245789999999964221   1111   22344444    345556666666543      577777765

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.31  E-value=0.00055  Score=60.71  Aligned_cols=85  Identities=19%  Similarity=0.215  Sum_probs=52.9

Q ss_pred             CC-CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCH--HHHHHHHHHHHH-H
Q 022335           13 KG-KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQ--EHAKKVVESTFE-H   88 (299)
Q Consensus        13 ~~-k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~--~~v~~~~~~~~~-~   88 (299)
                      .| .++||+||+|++|...+..+...|++|++++++.+++++..+.+++.+.+.. +..  .+.  +++.+.+.++.. .
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i~~--~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV-ITE--DQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE-EEH--HHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE-Eec--CccchHHHHHHHHHHhhcc
Confidence            37 8999999999999998887777899999988776653333333444454332 221  110  122222222220 1


Q ss_pred             cCCccEEEEcCC
Q 022335           89 FGKLDILVNAAA  100 (299)
Q Consensus        89 ~g~id~lv~~ag  100 (299)
                      -+++|++|.++|
T Consensus       243 ~~g~Dvvid~~G  254 (364)
T 1gu7_A          243 GGEAKLALNCVG  254 (364)
T ss_dssp             TCCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            247999999988

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.29  E-value=0.00015  Score=62.61  Aligned_cols=94  Identities=22%  Similarity=0.253  Sum_probs=60.4

Q ss_pred             CCCCCE-EEEecCCC-----------------h-HHHHHHHHHHHcCCeEEEEeCChhHHH------H--HHHHHHh---
Q 022335           11 ILKGKV-ALITGGGS-----------------G-IGFEISTQFGKHGASVAIMGRRKQVLD------A--AVSALRS---   60 (299)
Q Consensus        11 ~l~~k~-vlItGas~-----------------g-iG~aia~~la~~G~~Vv~~~r~~~~~~------~--~~~~~~~---   60 (299)
                      .+.||+ ||||+|..                 | .|.++|++++++|+.|+++.+..+-..      .  ..+.+..   
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            367888 99998864                 4 999999999999999999987532100      0  0111100   


Q ss_pred             cCCcEEEEEcCCCCHHHHHHHHHHH------------------------------HHHcCCccEEEEcCCCCCC
Q 022335           61 LGIKAVGFEGDVRRQEHAKKVVEST------------------------------FEHFGKLDILVNAAAGNFL  104 (299)
Q Consensus        61 ~~~~v~~~~~Dl~~~~~v~~~~~~~------------------------------~~~~g~id~lv~~ag~~~~  104 (299)
                      ....+..+..|+.+.+++.+.+...                              .+.++..|++|.+|++...
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            0122445566666665555555432                              2345789999999998654

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.25  E-value=0.002  Score=56.00  Aligned_cols=113  Identities=15%  Similarity=0.196  Sum_probs=68.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcCC--cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           16 VALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLGI--KAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++.|+||+|.+|..++..|+.+|  ..|+++++++  .+....++.+...  ++..+..    .++.++.+       ..
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~-------~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG----PEQLPDCL-------KG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES----GGGHHHHH-------TT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC----CCCHHHHh-------CC
Confidence            58999999999999999999988  6799999987  3444445544321  2222210    12223222       37


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .|++|+.+|.....   ..+..   +.+..|......+    .+.+.+..+      .+.||++|.
T Consensus        69 aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i----~~~i~~~~p------~a~viv~sN  118 (314)
T 1mld_A           69 CDVVVIPAGVPRKP---GMTRD---DLFNTNATIVATL----TAACAQHCP------DAMICIISN  118 (314)
T ss_dssp             CSEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHH----HHHHHHHCT------TSEEEECSS
T ss_pred             CCEEEECCCcCCCC---CCcHH---HHHHHHHHHHHHH----HHHHHhhCC------CeEEEEECC
Confidence            89999999975321   11212   2345555544444    444444432      577888754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.24  E-value=0.0021  Score=55.04  Aligned_cols=90  Identities=13%  Similarity=0.193  Sum_probs=68.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      ..|++.+|+|.|+ ||+|..++..|+..|.. +.++|.+.                  .+.+..++.+.+.+.  ++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            3577889999987 79999999999999964 88888765                  577777788877654  56677


Q ss_pred             EcCCCCHHHHHHHHHHHHHH----cCCccEEEEcCC
Q 022335           69 EGDVRRQEHAKKVVESTFEH----FGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~----~g~id~lv~~ag  100 (299)
                      ..++++.+.++.+++.+...    ...+|+||.+..
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            78888877777776544321    137899997753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.24  E-value=0.0013  Score=57.72  Aligned_cols=76  Identities=22%  Similarity=0.257  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|+ |++|...+..+...|++|+++++++++++.+    ++.+.+..+   |-.+.+-.+    .+.+..+++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~i---~~~~~~~~~----~~~~~~g~~  233 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RRLGAEVAV---NARDTDPAA----WLQKEIGGA  233 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEEE---ETTTSCHHH----HHHHHHSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HHcCCCEEE---eCCCcCHHH----HHHHhCCCC
Confidence            5899999997 8999999988888999999999998776643    334544332   333322222    233334689


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.++|
T Consensus       234 d~vid~~g  241 (340)
T 3s2e_A          234 HGVLVTAV  241 (340)
T ss_dssp             EEEEESSC
T ss_pred             CEEEEeCC
Confidence            99999987

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.21  E-value=0.019  Score=50.03  Aligned_cols=113  Identities=13%  Similarity=0.088  Sum_probs=75.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+++.|+|+ |.+|.+++..|+..|.  .|+++++++++++....++.+.    +.++.+...|   .           +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------H
Confidence            567999996 9999999999999987  7999999999888877777653    1233433322   1           1


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .+..-|++|..+|....   ...+..   +.++.|..    +++.+.+.+.+..+      .+.|++++.
T Consensus        70 a~~~aDvVvi~ag~p~k---pG~~R~---dL~~~N~~----Iv~~i~~~I~~~~p------~a~vlvvtN  123 (326)
T 3pqe_A           70 DCKDADIVCICAGANQK---PGETRL---ELVEKNLK----IFKGIVSEVMASGF------DGIFLVATN  123 (326)
T ss_dssp             GGTTCSEEEECCSCCCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHTTC------CSEEEECSS
T ss_pred             HhCCCCEEEEecccCCC---CCccHH---HHHHHHHH----HHHHHHHHHHHhcC------CeEEEEcCC
Confidence            23478999999996422   122332   23555543    45555566666543      577777765

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.17  E-value=0.0048  Score=54.41  Aligned_cols=78  Identities=18%  Similarity=0.280  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCC--CHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR--RQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~--~~~~v~~~~~~~~~~~   89 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++..    ++.+.+. ++  |..  +.++..+.+.+...  
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~-vi--~~~~~~~~~~~~~i~~~~~--  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADL-VL--QISKESPQEIARKVEGQLG--  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSE-EE--ECSSCCHHHHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCCE-EE--cCcccccchHHHHHHHHhC--
Confidence            4889999996 8999999887777899 899999988765543    3345432 22  333  23333222222222  


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      +++|++|.++|
T Consensus       241 ~g~D~vid~~g  251 (356)
T 1pl8_A          241 CKPEVTIECTG  251 (356)
T ss_dssp             SCCSEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            57999999988

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.13  E-value=0.002  Score=54.15  Aligned_cols=81  Identities=16%  Similarity=0.254  Sum_probs=58.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|++++|+|.|+ ||+|.+++..|+..|.. +.+++.+.                   .+.+.+++.+.+.+.  ++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            366889999998 67999999999999985 77876542                   567778888877654  45556


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..+++ .+.+.+++.       ..|+||++..
T Consensus       104 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             eccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            65554 344444444       5799998853

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.12  E-value=0.0054  Score=54.00  Aligned_cols=80  Identities=19%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHH-HcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFE-HFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~-~~g   90 (299)
                      .|.++||+|+ |++|..++..+...|++|+++++++++++.+    ++.+.+. ++  |.++ .+..+++.+.... .-+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~-~~--~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGADV-TL--VVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSE-EE--ECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHhCCCE-EE--cCcccccHHHHHHHHhccccCC
Confidence            4889999997 8999999988778999999999988766543    3345442 22  3332 2222222221110 013


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|++|+++|
T Consensus       240 g~D~vid~~g  249 (352)
T 1e3j_A          240 LPNVTIDCSG  249 (352)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.12  E-value=0.00076  Score=55.87  Aligned_cols=72  Identities=13%  Similarity=0.057  Sum_probs=56.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+...       ..+.++..|.++++.+++.      ...+.|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            457899997 8999999999999999 999999987655432       2378899999999876554      123689


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            9998764

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.09  E-value=0.0011  Score=58.82  Aligned_cols=78  Identities=21%  Similarity=0.207  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+| +|++|...+..+...|++|+++++++++++.+    ++.+.+.. +  | .+.+++.+.+.++.. -.++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v-i--~-~~~~~~~~~v~~~~~-g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA----FALGADHG-I--N-RLEEDWVERVYALTG-DRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHTCSEE-E--E-TTTSCHHHHHHHHHT-TCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH----HHcCCCEE-E--c-CCcccHHHHHHHHhC-CCCc
Confidence            489999999 89999999988888999999999998776653    23344322 2  3 332222222222221 1279


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.++|
T Consensus       259 D~vid~~g  266 (363)
T 3uog_A          259 DHILEIAG  266 (363)
T ss_dssp             EEEEEETT
T ss_pred             eEEEECCC
Confidence            99999998

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.04  E-value=0.0029  Score=55.92  Aligned_cols=76  Identities=24%  Similarity=0.310  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG-   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g-   90 (299)
                      .|.++||+|+ |++|...+..+... |++|+++++++++++.+    ++.+.+.. +  |.++.  +.+.+.++.  .+ 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v-i--~~~~~--~~~~v~~~~--~g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGADHV-V--DARRD--PVKQVMELT--RGR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCSEE-E--ETTSC--HHHHHHHHT--TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHhCCCEE-E--eccch--HHHHHHHHh--CCC
Confidence            4889999999 89999998877778 99999999988766554    23444322 2  33332  323333221  13 


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|++|.++|
T Consensus       254 g~Dvvid~~G  263 (359)
T 1h2b_A          254 GVNVAMDFVG  263 (359)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            6999999998

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.02  E-value=0.00074  Score=56.82  Aligned_cols=70  Identities=17%  Similarity=0.191  Sum_probs=49.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .++| +++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++       .....     ++..+.+.      
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~-------~~~~~-----~~~~~~~~------  165 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV-------KIFSL-----DQLDEVVK------  165 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC-------EEEEG-----GGHHHHHH------
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-------ccCCH-----HHHHhhhc------
Confidence            4578 8999997 8999999999999998 7999999987765543322       11221     22333322      


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                       ..|+|||+...
T Consensus       166 -~aDiVInatp~  176 (253)
T 3u62_A          166 -KAKSLFNTTSV  176 (253)
T ss_dssp             -TCSEEEECSST
T ss_pred             -CCCEEEECCCC
Confidence             68999998754

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.0008  Score=58.71  Aligned_cols=75  Identities=21%  Similarity=0.252  Sum_probs=49.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++||+|++|++|..++..+...|++|+++++++++++.+    ++.+.+.. +  |..+.+  .+.+.++.  .+++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~-i--~~~~~~--~~~~~~~~--~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEV-L--AREDVM--AERIRPLD--KQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEE-E--ECC-----------CC--SCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHcCCcEE-E--ecCCcH--HHHHHHhc--CCcccEE
Confidence            799999999999999998888999999999987766554    23444322 2  333322  12222221  2479999


Q ss_pred             EEcCCC
Q 022335           96 VNAAAG  101 (299)
Q Consensus        96 v~~ag~  101 (299)
                      |+++|.
T Consensus       221 id~~g~  226 (328)
T 1xa0_A          221 VDPVGG  226 (328)
T ss_dssp             EECSTT
T ss_pred             EECCcH
Confidence            999983

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.01  E-value=0.0027  Score=56.65  Aligned_cols=80  Identities=18%  Similarity=0.247  Sum_probs=53.5

Q ss_pred             CCCEEEEec-CCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITG-GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItG-as~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.++||.| |+|++|...+..+...|++|+++++++++++.+.    +.+.+.. +  |-.+.+-.+++ .++... .+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~-~--~~~~~~~~~~v-~~~t~~-~g  240 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHV-C--NAASPTFMQDL-TEALVS-TG  240 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCE-E--ETTSTTHHHHH-HHHHHH-HC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEE-E--eCCChHHHHHH-HHHhcC-CC
Confidence            478899997 9999999999888788999999999887765543    3454322 2  32332222222 222111 27


Q ss_pred             ccEEEEcCCC
Q 022335           92 LDILVNAAAG  101 (299)
Q Consensus        92 id~lv~~ag~  101 (299)
                      +|+++.+.|.
T Consensus       241 ~d~v~d~~g~  250 (379)
T 3iup_A          241 ATIAFDATGG  250 (379)
T ss_dssp             CCEEEESCEE
T ss_pred             ceEEEECCCc
Confidence            9999999984

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.0057  Score=54.50  Aligned_cols=80  Identities=19%  Similarity=0.289  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      .|.++||+| +|++|..++..+...| ++|+++++++++++.+    ++.+.+. ++..+.++.+++.+   .+.+.. +
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~-vi~~~~~~~~~~~~---~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADL-TLNRRETSVEERRK---AIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSE-EEETTTSCHHHHHH---HHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH----HHcCCcE-EEeccccCcchHHH---HHHHHhCC
Confidence            488999999 8999999998877889 5999999998776554    3344432 23222222444333   333333 2


Q ss_pred             -CccEEEEcCCC
Q 022335           91 -KLDILVNAAAG  101 (299)
Q Consensus        91 -~id~lv~~ag~  101 (299)
                       ++|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             69999999983

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.99  E-value=0.0025  Score=56.70  Aligned_cols=79  Identities=14%  Similarity=0.265  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ |++|..++..+...|+ +|+++++++++++.+    ++.+.+.. +  |.++ .+++.+.+.++..  +
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v-i--~~~~~~~~~~~~~~~~~~--~  261 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATDF-V--NPNDHSEPISQVLSKMTN--G  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCEE-E--CGGGCSSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHhCCceE-E--eccccchhHHHHHHHHhC--C
Confidence            4889999996 9999999988778899 799999998876654    23443322 2  3332 1223333333322  4


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|+++|.
T Consensus       262 g~D~vid~~g~  272 (374)
T 1cdo_A          262 GVDFSLECVGN  272 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999983

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.98  E-value=0.0038  Score=55.46  Aligned_cols=78  Identities=17%  Similarity=0.178  Sum_probs=52.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      -.|.++||+|++|++|...+..+...|++|+.+. ++++++.    +++.+.+.. +  |..+.+    +.+.+.+.. +
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~----~~~lGa~~v-i--~~~~~~----~~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL----AKSRGAEEV-F--DYRAPN----LAQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH----HHHTTCSEE-E--ETTSTT----HHHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH----HHHcCCcEE-E--ECCCch----HHHHHHHHccC
Confidence            4589999999999999999988888999988876 5555442    334454322 2  333332    222233322 4


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|+++.+.|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999983

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.97  E-value=0.0058  Score=54.92  Aligned_cols=43  Identities=16%  Similarity=0.200  Sum_probs=38.2

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++++...++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367999999997 8999999999999999999999998876664

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.94  E-value=0.0033  Score=55.84  Aligned_cols=74  Identities=23%  Similarity=0.288  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|+ |++|..++..+...|++|+++++++++++.+.+    .+.+..   .|..+.+.+++    +.   +++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~~v---i~~~~~~~~~~----~~---~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGADEV---VNSRNADEMAA----HL---KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSEE---EETTCHHHHHT----TT---TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcEE---eccccHHHHHH----hh---cCC
Confidence            4889999998 889999998777889999999999887665432    343322   24445443322    21   589


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |++|.++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999984

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.92  E-value=0.0022  Score=56.20  Aligned_cols=116  Identities=12%  Similarity=0.145  Sum_probs=71.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--e-----EEEEeCCh--hHHHHHHHHHHhcCCc-EEEEEcCCCCHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA--S-----VAIMGRRK--QVLDAAVSALRSLGIK-AVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~--~-----Vv~~~r~~--~~~~~~~~~~~~~~~~-v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .+++||||+|.||..++..|+..|.  .     +++++.++  +.++....++.+.... +.-+.  +++  +..     
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~~~-----   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KEE-----   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CHH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--EcC--CcH-----
Confidence            4799999999999999999998875  4     99999975  4677777777664211 21111  111  111     


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCc-eEEEecc
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGG-SILNISA  157 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g-~iv~vsS  157 (299)
                        +.+.+.|++|+.||.....   ..+.   .+.++.|.....    .+.+.+.+..+      .+ .|+++|.
T Consensus        75 --~~~~daDvVvitAg~prkp---G~tR---~dll~~N~~i~~----~i~~~i~~~~~------~~~~vivvsN  130 (333)
T 5mdh_A           75 --IAFKDLDVAILVGSMPRRD---GMER---KDLLKANVKIFK----CQGAALDKYAK------KSVKVIVVGN  130 (333)
T ss_dssp             --HHTTTCSEEEECCSCCCCT---TCCT---TTTHHHHHHHHH----HHHHHHHHHSC------TTCEEEECSS
T ss_pred             --HHhCCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHHHhCC------CCeEEEEcCC
Confidence              1234789999999864321   1122   234566665544    44555555442      35 4776665

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.91  E-value=0.0027  Score=56.48  Aligned_cols=79  Identities=15%  Similarity=0.287  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ |++|..++..+...|+ +|+++++++++++.+    ++.+.+.. +  |.++ .+++.+.+.++..  +
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v-i--~~~~~~~~~~~~~~~~~~--~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATEC-V--NPQDYKKPIQEVLTEMSN--G  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE-E--CGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCceE-e--cccccchhHHHHHHHHhC--C
Confidence            4889999995 9999999988888899 799999998876654    23443322 2  3332 1223333333322  4


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|.++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999983

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.90  E-value=0.00091  Score=57.12  Aligned_cols=69  Identities=12%  Similarity=0.212  Sum_probs=51.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++++++|+|+ ||.|++++..|.+.|+ +|++++|+.++.+++.+++       ..+.     .+++       .+ .
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~-------~~~~-----~~~l-------~~-l  177 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF-------KVIS-----YDEL-------SN-L  177 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS-------EEEE-----HHHH-------TT-C
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc-------Cccc-----HHHH-------Hh-c
Confidence            467999999998 6999999999999998 7999999998777665432       1111     1222       12 3


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                       ..|+|||+...
T Consensus       178 -~~DivInaTp~  188 (282)
T 3fbt_A          178 -KGDVIINCTPK  188 (282)
T ss_dssp             -CCSEEEECSST
T ss_pred             -cCCEEEECCcc
Confidence             68999999864

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.89  E-value=0.027  Score=48.28  Aligned_cols=112  Identities=11%  Similarity=0.061  Sum_probs=72.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++.|+|+ |.+|.+++..|+..|.  .|++.+++++.++....++.+.    .....+...+  +.+           .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~--d~~-----------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeC--CHH-----------Hh
Confidence            5889999 9999999999999998  8999999998877554444332    1222222211  111           12


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..+|.....   ..+..+   .+..|.    .+++.+.+.+.+..+      .+.|+++|.
T Consensus        68 ~~aDiVViaag~~~kp---G~~R~d---l~~~N~----~i~~~i~~~i~~~~p------~a~iivvsN  119 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP---GMTRLD---LAHKNA----GIIKDIAKKIVENAP------ESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCS---SCCHHH---HHHHHH----HHHHHHHHHHHTTST------TCEEEECSS
T ss_pred             CCCCEEEECCCCCCCC---CCcHHH---HHHHHH----HHHHHHHHHHHhhCC------CeEEEEeCC
Confidence            3689999999965321   223333   344443    456666777776543      577777775

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.88  E-value=0.0035  Score=55.71  Aligned_cols=79  Identities=16%  Similarity=0.278  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ |++|..++..+...|+ +|+++++++++++.+    ++.+.+.. +  |.++ .+++.+.+.++..  +
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v-i--~~~~~~~~~~~~v~~~~~--~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATDC-L--NPRELDKPVQDVITELTA--G  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE-E--CGGGCSSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCcEE-E--ccccccchHHHHHHHHhC--C
Confidence            4889999996 8999999887777899 799999988776553    23444322 2  3332 1223333333322  4


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|.++|.
T Consensus       265 g~Dvvid~~G~  275 (376)
T 1e3i_A          265 GVDYSLDCAGT  275 (376)
T ss_dssp             CBSEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            89999999983

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.86  E-value=0.0025  Score=56.50  Aligned_cols=76  Identities=18%  Similarity=0.242  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      .|.++||+||+|++|...+..+.. .|++|+++++++++++.+    ++.+.+.. +  |-++  +   +.+.+.+.. +
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~lGad~v-i--~~~~--~---~~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KSLGAHHV-I--DHSK--P---LAAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HHTTCSEE-E--CTTS--C---HHHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HHcCCCEE-E--eCCC--C---HHHHHHHhcCC
Confidence            488999999999999987765544 489999999998776554    33454432 2  3222  2   223333322 4


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.++|
T Consensus       239 g~Dvvid~~g  248 (363)
T 4dvj_A          239 APAFVFSTTH  248 (363)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCC
Confidence            7999999987

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.86  E-value=0.0016  Score=57.55  Aligned_cols=83  Identities=16%  Similarity=0.260  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+||+|++|...+.-+...|++++++.+..+..++..+.+++.+.+.. +..  . ....++ +.++....+++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i~~--~-~~~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV-ITE--E-ELRRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE-EEH--H-HHHSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE-Eec--C-cchHHH-HHHHHhCCCCc
Confidence            489999999999999998887777899988877654433333334445554432 221  1 111111 11111112359


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |++|.+.|
T Consensus       242 Dvvid~~g  249 (357)
T 1zsy_A          242 RLALNCVG  249 (357)
T ss_dssp             SEEEESSC
T ss_pred             eEEEECCC
Confidence            99999987

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.84  E-value=0.0086  Score=52.49  Aligned_cols=76  Identities=14%  Similarity=0.197  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ |++|...+..+...  |++|+++++++++.+.+.    +.+.+.. +  |..+.   .++++++.+ -.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v-i--~~~~~---~~~~~~~~~-g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADYV-S--EMKDA---ESLINKLTD-GL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSEE-E--CHHHH---HHHHHHHHT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCEE-e--ccccc---hHHHHHhhc-CC
Confidence            6899999999 89999998877778  999999999887765543    2343222 2  32220   122333322 12


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|++|.++|
T Consensus       238 g~D~vid~~g  247 (344)
T 2h6e_A          238 GASIAIDLVG  247 (344)
T ss_dssp             CEEEEEESSC
T ss_pred             CccEEEECCC
Confidence            7999999998

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.80  E-value=0.028  Score=47.82  Aligned_cols=42  Identities=26%  Similarity=0.278  Sum_probs=36.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA   57 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~   57 (299)
                      +++.|+|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            57888876 7899999999999999999999999887776655

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.79  E-value=0.0028  Score=51.48  Aligned_cols=43  Identities=16%  Similarity=0.357  Sum_probs=37.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      +++|+||+|.+|.+++..|+++|++|++++|+++..+.+.+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999988777665543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.79  E-value=0.0019  Score=56.92  Aligned_cols=69  Identities=23%  Similarity=0.338  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|+ |++|...+..+...|++|+++++++++.+.+    ++.+.+..+     ++.+.+.+          ++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v~-----~~~~~~~~----------~~  235 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----LSMGVKHFY-----TDPKQCKE----------EL  235 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----HHTTCSEEE-----SSGGGCCS----------CE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HhcCCCeec-----CCHHHHhc----------CC
Confidence            4899999997 9999999888888899999999988776643    335544433     23332211          79


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |+++.++|.
T Consensus       236 D~vid~~g~  244 (348)
T 3two_A          236 DFIISTIPT  244 (348)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCc
Confidence            999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.79  E-value=0.002  Score=57.25  Aligned_cols=79  Identities=16%  Similarity=0.266  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ |++|..++..+...|+ +|+++++++++++.+.    +.+.+.. +  |.++ .+++.+.+.++..  +
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v-i--~~~~~~~~~~~~v~~~~~--~  259 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK----EFGATEC-I--NPQDFSKPIQEVLIEMTD--G  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HHTCSEE-E--CGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCceE-e--ccccccccHHHHHHHHhC--C
Confidence            4889999996 9999999987777899 7999999888766543    2343322 2  3322 1223333333222  4


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|.++|.
T Consensus       260 g~D~vid~~g~  270 (373)
T 2fzw_A          260 GVDYSFECIGN  270 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCc
Confidence            79999999983

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.79  E-value=0.0043  Score=53.46  Aligned_cols=73  Identities=23%  Similarity=0.387  Sum_probs=52.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+.|++++|.|+ |+||+++++.|...|++|++.+|+.++.+...    +.+.  ..+..     ++++++       +
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g~--~~~~~-----~~l~~~-------l  213 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMGL--VPFHT-----DELKEH-------V  213 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTC--EEEEG-----GGHHHH-------S
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCC--eEEch-----hhHHHH-------h
Confidence            4678999999996 89999999999999999999999986654432    2232  22221     222322       2


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      ...|+||++...
T Consensus       214 ~~aDvVi~~~p~  225 (300)
T 2rir_A          214 KDIDICINTIPS  225 (300)
T ss_dssp             TTCSEEEECCSS
T ss_pred             hCCCEEEECCCh
Confidence            478999999874

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.78  E-value=0.046  Score=47.32  Aligned_cols=113  Identities=13%  Similarity=0.153  Sum_probs=71.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCC--hhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRR--KQVLDAAVSALRSL------GIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~--~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      +.+.+.|+|+ |.+|..++..|+..|. .|++++++  ++..+....++.+.      ..++..- .|   .        
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~--------   73 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y--------   73 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H--------
Confidence            4678999997 9999999999999999 99999999  55566555444322      1223221 12   1        


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                         +.+...|++|..+|.....   ..+..   +.+..|..    +++.+.+.+.+..+      .+.|+++|.
T Consensus        74 ---~a~~~aDvVIiaag~p~kp---g~~R~---dl~~~N~~----i~~~i~~~i~~~~p------~a~vlvvsN  128 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIARKP---GMSRD---DLVATNSK----IMKSITRDIAKHSP------NAIIVVLTN  128 (315)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT---TCCHH---HHHHHHHH----HHHHHHHHHHHHCT------TCEEEECCS
T ss_pred             ---HHhCCCCEEEEeCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHHHhCC------CeEEEECCC
Confidence               1245789999999964321   22332   34555554    44555555555442      577777774

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.76  E-value=0.0029  Score=55.91  Aligned_cols=75  Identities=23%  Similarity=0.271  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|+ |++|..++..+...|++|+++++++++++.+.+    .+.+.. +  |..+..+   +.+.+.   +++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v-~--~~~~~~~---~~~~~~---~~~  244 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGADHY-I--ATLEEGD---WGEKYF---DTF  244 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE-E--EGGGTSC---HHHHSC---SCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCCEE-E--cCcCchH---HHHHhh---cCC
Confidence            4899999999 999999998877889999999998877655432    343322 2  2222201   122221   589


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |++|.++|.
T Consensus       245 D~vid~~g~  253 (360)
T 1piw_A          245 DLIVVCASS  253 (360)
T ss_dssp             EEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999985

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.75  E-value=0.0071  Score=52.84  Aligned_cols=89  Identities=17%  Similarity=0.230  Sum_probs=58.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++++.                   .+.+..++.+.+.+.  ++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            467889999987 69999999999999976 77887643                   467777788877654  45555


Q ss_pred             EcCC-------CCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDV-------RRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl-------~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..++       ++++....-.+.+.+.+.+.|+||++..
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence            5444       2221111111122222346899998864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.74  E-value=0.0019  Score=57.09  Aligned_cols=75  Identities=19%  Similarity=0.192  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+|+ |++|...+..+...|++|+++++++++.+...+   +.+.+.. +  |..+.+.++       +..+++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v-i--~~~~~~~~~-------~~~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGADDY-V--IGSDQAKMS-------ELADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCSCE-E--ETTCHHHHH-------HSTTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCcee-e--ccccHHHHH-------HhcCCC
Confidence            5899999995 999999998777889999999998876554432   3343322 2  334443322       222579


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |+++.++|.
T Consensus       246 D~vid~~g~  254 (357)
T 2cf5_A          246 DYVIDTVPV  254 (357)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCC
Confidence            999999984

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.73  E-value=0.034  Score=48.32  Aligned_cols=114  Identities=14%  Similarity=0.150  Sum_probs=72.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL------GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      ++.+++.|+|+ |.+|.+++..|+..|. .|+++++++++++....++.+.      ..++.. ..|   .         
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~---------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y---------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G---------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H---------
Confidence            34668999998 9999999999999998 9999999998877665555432      222321 122   1         


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                        +.+..-|++|..+|.....   ..+..   +.+..|.    .+++.+.+.+.+..+      .+.|++++.
T Consensus        71 --~a~~~aDiVIiaag~p~k~---G~~R~---dl~~~N~----~i~~~i~~~i~~~~p------~a~iivvtN  125 (324)
T 3gvi_A           71 --AAIEGADVVIVTAGVPRKP---GMSRD---DLLGINL----KVMEQVGAGIKKYAP------EAFVICITN  125 (324)
T ss_dssp             --GGGTTCSEEEECCSCCCC--------C---HHHHHHH----HHHHHHHHHHHHHCT------TCEEEECCS
T ss_pred             --HHHCCCCEEEEccCcCCCC---CCCHH---HHHHhhH----HHHHHHHHHHHHHCC------CeEEEecCC
Confidence              1234789999999864321   11111   2344444    455556666666543      577777775

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.70  E-value=0.039  Score=48.12  Aligned_cols=117  Identities=9%  Similarity=0.054  Sum_probs=76.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ....+++.|+|+ |.+|.+++..|+.+|.  .|++++.++++++....++.+..   .....+..+  +.+         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~---------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS---------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH---------
Confidence            345778999998 9999999999999987  79999999998888888886531   122222221  111         


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                        .+..-|++|..+|.....   ..+..   +.++.|..    +++.+.+.+.+..+      .+.++++|.
T Consensus        84 --~~~~aDiVvi~aG~~~kp---G~tR~---dL~~~N~~----I~~~i~~~i~~~~p------~a~vlvvtN  137 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQQE---GESRL---NLVQRNVN----IFKFIIPNVVKYSP------QCKLLIVSN  137 (331)
T ss_dssp             --GGTTEEEEEECCSCCCCT---TCCGG---GGHHHHHH----HHHHHHHHHHHHCT------TCEEEECSS
T ss_pred             --HhCCCCEEEEccCCCCCC---CccHH---HHHHHHHH----HHHHHHHHHHHHCC------CeEEEEecC
Confidence              234789999999964321   22222   23444443    45555555555543      577777775

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.68  E-value=0.0031  Score=56.17  Aligned_cols=79  Identities=14%  Similarity=0.246  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++..    ++.+.+.. +  |..+ .+++.+.+.++.  .+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v-i--~~~~~~~~~~~~i~~~~--~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKFGVNEF-V--NPKDHDKPIQEVIVDLT--DG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH----HTTTCCEE-E--CGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCcEE-E--ccccCchhHHHHHHHhc--CC
Confidence            4889999998 9999999888778899 799999998876643    34454332 2  3221 122333333322  24


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999983

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.68  E-value=0.0042  Score=54.96  Aligned_cols=47  Identities=19%  Similarity=0.311  Sum_probs=41.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      +|+||+++|+|. |.+|..+|+.|.+.|++|++.+++.++++++.+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            688999999997 78999999999999999999999988777766654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.68  E-value=0.0037  Score=56.41  Aligned_cols=58  Identities=16%  Similarity=0.241  Sum_probs=43.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~   79 (299)
                      ..++|.|. |.+|+.+++.|.++|..|++++++++..+...+    .+  +.++..|.++++.++
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~   62 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLE   62 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHH
Confidence            45899997 789999999999999999999999987665432    22  334555666655443

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.65  E-value=0.084  Score=45.81  Aligned_cols=115  Identities=12%  Similarity=0.130  Sum_probs=73.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +.+++.|+|+ |.+|.+++..|+..|. .|+++++++++++....++.+.    +.+..+...+  +.           +
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~-----------~   69 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY-----------K   69 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------H
Confidence            3567999995 9999999999999988 8999999998887776666543    1122222111  11           1


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .+..-|++|..+|.....   ..+..+   .+..|.    .+++.+.+.+.+..+      .+.|++++.
T Consensus        70 a~~~aDvVIi~ag~p~k~---G~~R~d---l~~~N~----~i~~~i~~~i~~~~p------~a~vivvtN  123 (321)
T 3p7m_A           70 DLENSDVVIVTAGVPRKP---GMSRDD---LLGINI----KVMQTVGEGIKHNCP------NAFVICITN  123 (321)
T ss_dssp             GGTTCSEEEECCSCCCCT---TCCHHH---HHHHHH----HHHHHHHHHHHHHCT------TCEEEECCS
T ss_pred             HHCCCCEEEEcCCcCCCC---CCCHHH---HHHHhH----HHHHHHHHHHHHHCC------CcEEEEecC
Confidence            234689999999864321   223332   344444    345555566665542      577777754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.65  E-value=0.026  Score=50.10  Aligned_cols=84  Identities=18%  Similarity=0.205  Sum_probs=57.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCC-----------CCHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV-----------RRQEHAKK   80 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl-----------~~~~~v~~   80 (299)
                      +.+.+++|+|+ |.+|..+++.+...|++|++++++.++++.+.+    .+.+  ++..|+           ...+....
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~--~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQ--WLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCE--ECCCC-------------CHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCe--EEeccccccccccchhhhhHHHHhh
Confidence            46889999999 799999999999999999999999987766533    3322  222221           01122223


Q ss_pred             HHHHHHHHcCCccEEEEcCCCC
Q 022335           81 VVESTFEHFGKLDILVNAAAGN  102 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag~~  102 (299)
                      -.+.+.+.....|++|+++.+.
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCT
T ss_pred             hHHHHHHHHhcCCEEEECCCCC
Confidence            3344445557899999987543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.64  E-value=0.0024  Score=56.73  Aligned_cols=76  Identities=25%  Similarity=0.294  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH---H
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE---H   88 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~---~   88 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++.+.. ++   .+.+..   .|.++.+-    .+.+.+   .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~~v---i~~~~~~~----~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EE---VGATAT---VDPSAGDV----VEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HH---HTCSEE---ECTTSSCH----HHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---cCCCEE---ECCCCcCH----HHHHHhhhhc
Confidence            4889999998 8999998887778899 788888888765533 22   343322   24333322    222322   1


Q ss_pred             -cCCccEEEEcCC
Q 022335           89 -FGKLDILVNAAA  100 (299)
Q Consensus        89 -~g~id~lv~~ag  100 (299)
                       .+++|+++.++|
T Consensus       250 ~~gg~Dvvid~~G  262 (370)
T 4ej6_A          250 VPGGVDVVIECAG  262 (370)
T ss_dssp             STTCEEEEEECSC
T ss_pred             cCCCCCEEEECCC
Confidence             248999999987

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.62  E-value=0.0046  Score=55.59  Aligned_cols=77  Identities=23%  Similarity=0.367  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++.+ +   +.+.+.. +  |-.+.+    +.+.+.+.. +
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~---~lGa~~v-i--~~~~~~----~~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-K---ELGADHV-I--DPTKEN----FVEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-H---HHTCSEE-E--CTTTSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-H---HcCCCEE-E--cCCCCC----HHHHHHHHhCC
Confidence            4899999998 8999998887778899 799999988776543 2   3343322 2  333322    223333333 2


Q ss_pred             -CccEEEEcCCC
Q 022335           91 -KLDILVNAAAG  101 (299)
Q Consensus        91 -~id~lv~~ag~  101 (299)
                       ++|+++.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             69999999983

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.62  E-value=0.0021  Score=55.90  Aligned_cols=73  Identities=18%  Similarity=0.235  Sum_probs=50.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |+ +||+|++|++|...+..+...|++|+++++++++.+.+.    +.+.+..+-.-|...   +    .++  ..+++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~~---~----~~~--~~~~~d  213 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK----SLGANRILSRDEFAE---S----RPL--EKQLWA  213 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH----HHTCSEEEEGGGSSC---C----CSS--CCCCEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEEEecCCHHH---H----Hhh--cCCCcc
Confidence            45 999999999999999888889999999999988766543    234443332222111   1    111  124799


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      +++.++|
T Consensus       214 ~v~d~~g  220 (324)
T 3nx4_A          214 GAIDTVG  220 (324)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999876

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.58  E-value=0.0091  Score=52.92  Aligned_cols=76  Identities=16%  Similarity=0.212  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+.+++++++++.+    ++.+.+. ++  |..+.+    +.+++.+.. +
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~-vi--~~~~~~----~~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA----KQLGATH-VI--NSKTQD----PVAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HHHTCSE-EE--ETTTSC----HHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCCE-Ee--cCCccC----HHHHHHHhcCC
Confidence            4889999995 8999999887777899 588999988776554    2234332 22  222222    122222222 4


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|++|.++|
T Consensus       258 g~D~vid~~g  267 (371)
T 1f8f_A          258 GVNFALESTG  267 (371)
T ss_dssp             CEEEEEECSC
T ss_pred             CCcEEEECCC
Confidence            7999999998

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.58  E-value=0.0029  Score=56.21  Aligned_cols=79  Identities=22%  Similarity=0.329  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR-QEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~v~~~~~~~~~~~g   90 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++.+    ++.+.+.. +  |..+ .+++.+.+.++..  +
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v-i--~~~~~~~~~~~~i~~~t~--g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA----IELGATEC-L--NPKDYDKPIYEVICEKTN--G  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHTTCSEE-E--CGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCcEE-E--ecccccchHHHHHHHHhC--C
Confidence            4889999996 8999999887777899 799999988776653    23444322 2  3221 1123332332222  4


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            89999999983

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.52  E-value=0.0044  Score=56.76  Aligned_cols=75  Identities=12%  Similarity=0.181  Sum_probs=59.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+.++|.|+ |.+|+.+|+.|.++|++|++++.+++.++.+.+.+     ++.++..|.++++-++++=-      .+-|
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi------~~ad   70 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA------QDAD   70 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT------TTCS
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC------CcCC
Confidence            346888887 68999999999999999999999998877765544     47788999999988776511      2678


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      .+|...+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            8887654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.49  E-value=0.014  Score=51.17  Aligned_cols=76  Identities=17%  Similarity=0.183  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      .|.++||+|+ |++|...+.-+... |++|+.+++++++++.+    ++.+.+.. +..  .+ +.    .+++.+..  
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~----~~lGa~~~-i~~--~~-~~----~~~v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA----REVGADAA-VKS--GA-GA----ADAIRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH----HHTTCSEE-EEC--ST-TH----HHHHHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCCEE-EcC--CC-cH----HHHHHHHhCC
Confidence            4889999998 99999887766566 78899999998776543    34454432 222  22 22    22233322  


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      .++|+++.+.|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            279999999983

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.48  E-value=0.015  Score=52.08  Aligned_cols=77  Identities=18%  Similarity=0.214  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++.+    ++.+.+  ++  |..+.+-+.   +.+.+.. +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~i--~~~~~~~~~---~~~~~~~~g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAGFE--TI--DLRNSAPLR---DQIDQILGK  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTTCE--EE--ETTSSSCHH---HHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCc--EE--cCCCcchHH---HHHHHHhCC
Confidence            4889999997 9999998887777899 899999998776543    344542  33  333322101   1122222 3


Q ss_pred             -CccEEEEcCCC
Q 022335           91 -KLDILVNAAAG  101 (299)
Q Consensus        91 -~id~lv~~ag~  101 (299)
                       ++|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence             69999999984

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.48  E-value=0.045  Score=46.51  Aligned_cols=83  Identities=17%  Similarity=0.161  Sum_probs=59.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHH--------Hh--cCCcEEEEEcCCCCHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA---SVAIMGRRKQVLDAAVSAL--------RS--LGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~--------~~--~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      .+++.|+|+ |.+|.+++..|++.|+   +|++.+|++++++.+.++.        .+  ...++.++.+   .++.+++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            456888888 8999999999999998   8999999998887776532        11  1235555554   4566777


Q ss_pred             HHHHHHHH-cCCccEEEEcCC
Q 022335           81 VVESTFEH-FGKLDILVNAAA  100 (299)
Q Consensus        81 ~~~~~~~~-~g~id~lv~~ag  100 (299)
                      +++++... +.+=.++|++++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            78777665 433237787765

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.46  E-value=0.097  Score=45.52  Aligned_cols=113  Identities=11%  Similarity=0.098  Sum_probs=72.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..++.|+|+ |.+|..++..|+..+.  .|+++|.++++++....++.+..   .++.+.. |  +.+           .
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~-----------a   73 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS-----------D   73 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------H
Confidence            568999999 9999999999998876  79999999988888777775531   2333332 2  111           1


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +..-|++|..+|.....   ..+..   +.+..|.    -+++.+.+.+.+..+      .+.|++++.
T Consensus        74 ~~~aDvVii~ag~~~k~---g~~R~---dl~~~n~----~i~~~i~~~i~~~~p------~a~iiv~tN  126 (326)
T 2zqz_A           74 AKDADLVVITAGAPQKP---GETRL---DLVNKNL----KILKSIVDPIVDSGF------NGIFLVAAN  126 (326)
T ss_dssp             GGGCSEEEECCCCC--------CHH---HHHHHHH----HHHHHHHHHHHHHTC------CSEEEECSS
T ss_pred             hCCCCEEEEcCCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHHHCC------CeEEEEeCC
Confidence            33689999999864321   12222   2334443    345555666666543      577888754

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.46  E-value=0.075  Score=46.03  Aligned_cols=112  Identities=13%  Similarity=0.158  Sum_probs=71.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .++.|+|+ |.+|..++..|+..+.  .|+++|.++++++....++.+..   .++.+.. |  +           .+.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-----------~~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-----------YSDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-----------HHHh
Confidence            57999999 9999999999998876  79999999988888777776532   2333332 2  1           1123


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..+|.....   ..+..   +.+..|.    -+++.+.+.+.+..+      .+.|++++.
T Consensus        71 ~~aDvVii~ag~~~~~---g~~R~---dl~~~n~----~i~~~i~~~i~~~~p------~a~iiv~tN  122 (318)
T 1ez4_A           71 KDADLVVITAGAPQKP---GESRL---DLVNKNL----NILSSIVKPVVDSGF------DGIFLVAAN  122 (318)
T ss_dssp             TTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTC------CSEEEECSS
T ss_pred             CCCCEEEECCCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHHhCC------CeEEEEeCC
Confidence            4789999999864321   11111   2233333    455666666666543      577888754

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.42  E-value=0.16  Score=43.89  Aligned_cols=113  Identities=10%  Similarity=0.095  Sum_probs=71.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..++.|+|+ |.+|..++..|+.+|.  .|++++.++++++....++.+.    +.++.+.. |  +.           +
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~-----------~   70 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EY-----------S   70 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CG-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CH-----------H
Confidence            457999999 9999999999999884  7999999988777655555432    12333332 2  11           1


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .+.+-|++|..+|.....   ..+..   +.+..|.    -+++.+.+.+.+..+      .+.|+++|.
T Consensus        71 a~~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~----~i~~~i~~~i~~~~p------~a~viv~tN  124 (317)
T 3d0o_A           71 DCHDADLVVICAGAAQKP---GETRL---DLVSKNL----KIFKSIVGEVMASKF------DGIFLVATN  124 (317)
T ss_dssp             GGTTCSEEEECCCCCCCT---TCCHH---HHHHHHH----HHHHHHHHHHHHTTC------CSEEEECSS
T ss_pred             HhCCCCEEEECCCCCCCC---CCcHH---HHHHHHH----HHHHHHHHHHHHhCC------CcEEEEecC
Confidence            234789999999864321   22222   2334343    345555666666543      577777554

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.41  E-value=0.0039  Score=55.04  Aligned_cols=75  Identities=19%  Similarity=0.367  Sum_probs=50.4

Q ss_pred             CCCCEEEEecCCChHHHHH-HHHH-HHcCCe-EEEEeCChh---HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEI-STQF-GKHGAS-VAIMGRRKQ---VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        12 l~~k~vlItGas~giG~ai-a~~l-a~~G~~-Vv~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +++.++||+|+ |++|... +..+ ...|++ |+.++++++   +.+.+    ++.+.+.  +  |..+. ++.+ +.++
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~~lGa~~--v--~~~~~-~~~~-i~~~  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EELDATY--V--DSRQT-PVED-VPDV  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----HHTTCEE--E--ETTTS-CGGG-HHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----HHcCCcc--c--CCCcc-CHHH-HHHh
Confidence            34589999999 9999998 6655 467998 999999876   65543    2344322  2  44432 2233 3333


Q ss_pred             HHHcCCccEEEEcCC
Q 022335           86 FEHFGKLDILVNAAA  100 (299)
Q Consensus        86 ~~~~g~id~lv~~ag  100 (299)
                         .+++|++|.++|
T Consensus       240 ---~gg~Dvvid~~g  251 (357)
T 2b5w_A          240 ---YEQMDFIYEATG  251 (357)
T ss_dssp             ---SCCEEEEEECSC
T ss_pred             ---CCCCCEEEECCC
Confidence               348999999988

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.39  E-value=0.053  Score=46.92  Aligned_cols=112  Identities=10%  Similarity=0.167  Sum_probs=71.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++.|+|+ |.+|..++..|+.+|.  .|+++++++++++....++.+.    ..+..+...|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            5889997 9999999999999987  8999999998877766666542    22333332221  1           123


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..+|.....   ..+.   .+.+..|.    .+++.+.+.+.+..+      .+.|+++|.
T Consensus        68 ~~aDvVii~ag~~~kp---G~~R---~dl~~~N~----~i~~~i~~~i~~~~p------~a~vivvtN  119 (314)
T 3nep_X           68 EDSDVCIITAGLPRSP---GMSR---DDLLAKNT----EIVGGVTEQFVEGSP------DSTIIVVAN  119 (314)
T ss_dssp             TTCSEEEECCCC----------C---HHHHHHHH----HHHHHHHHHHHTTCT------TCEEEECCS
T ss_pred             CCCCEEEECCCCCCCC---CCCH---HHHHHhhH----HHHHHHHHHHHHhCC------CcEEEecCC
Confidence            4789999999964321   1111   23344444    445666667666543      577777775

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.39  E-value=0.014  Score=54.76  Aligned_cols=89  Identities=17%  Similarity=0.230  Sum_probs=59.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .+++.+|+|.|+ ||+|.++++.|+..|.. +.++|.+.                   .+.+.+++.+.+.+.  ++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            467889999988 69999999999999976 78888753                   467778888877754  45555


Q ss_pred             EcCC-------CCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDV-------RRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl-------~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..++       ++++...--.+.+.+.+.+.|+||++..
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            5554       2222111111222223346899998865

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.39  E-value=0.0075  Score=53.87  Aligned_cols=43  Identities=16%  Similarity=0.149  Sum_probs=37.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      .+.+++++|+|+ |++|+.++..+...|++|+++++++.+++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            567999999996 8999999999999999999999998766554

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.38  E-value=0.0099  Score=51.97  Aligned_cols=75  Identities=15%  Similarity=0.101  Sum_probs=52.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc----C--CcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL----G--IKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~--~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+++.|+|+ |.+|.+++..|+..|+ +|++++++++.++....++.+.    .  .++.. .   ++.+   +.+    
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea~----   76 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AAL----   76 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HHH----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HHh----
Confidence            357999998 9999999999999998 9999999998777754444321    1  22221 1   2222   122    


Q ss_pred             HHcCCccEEEEcCCCCC
Q 022335           87 EHFGKLDILVNAAAGNF  103 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~  103 (299)
                         ..-|++|..+|...
T Consensus        77 ---~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 ---TGADCVIVTAGLTK   90 (331)
T ss_dssp             ---TTCSEEEECCSCSS
T ss_pred             ---CCCCEEEEccCCCC
Confidence               36899999998643

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.33  E-value=0.015  Score=50.13  Aligned_cols=91  Identities=19%  Similarity=0.079  Sum_probs=56.6

Q ss_pred             CCCCCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-------Hhc--CCcEEEEEcC
Q 022335            1 MSLESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-------RSL--GIKAVGFEGD   71 (299)
Q Consensus         1 ~~~~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-------~~~--~~~v~~~~~D   71 (299)
                      ||++...     ..+++.|+| .|.+|..+++.|++.|++|++.+|++++.+.+.+.-       .+.  ..++.+  .=
T Consensus         1 m~m~~~~-----~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi--~~   72 (306)
T 3l6d_A            1 MSLSDES-----FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATI--FV   72 (306)
T ss_dssp             -CCCCCC-----CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEE--EC
T ss_pred             CCCCccc-----CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEE--EE
Confidence            6666422     345688886 589999999999999999999999998877654320       000  123333  33


Q ss_pred             CCCHHHHHHHHH--HHHHHcCCccEEEEcCC
Q 022335           72 VRRQEHAKKVVE--STFEHFGKLDILVNAAA  100 (299)
Q Consensus        72 l~~~~~v~~~~~--~~~~~~g~id~lv~~ag  100 (299)
                      +.+...++.++.  .+.. ..+=.++|++..
T Consensus        73 vp~~~~~~~v~~~~~l~~-~~~g~ivid~st  102 (306)
T 3l6d_A           73 LLDNHATHEVLGMPGVAR-ALAHRTIVDYTT  102 (306)
T ss_dssp             CSSHHHHHHHHTSTTHHH-HTTTCEEEECCC
T ss_pred             eCCHHHHHHHhcccchhh-ccCCCEEEECCC
Confidence            445666666664  3322 233356666654

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.32  E-value=0.15  Score=44.00  Aligned_cols=113  Identities=11%  Similarity=0.130  Sum_probs=70.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG----IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+++.|+|+ |.+|..++..|+..|.  .|++++++++.++....++.+..    .++.+.. |  +.           +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence            357999999 9999999999998875  79999999887776555554421    1344332 2  11           1


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .+...|++|..+|.......   +..+   .+..|    ..+.+.+.+.+.+..+      .+.++++|.
T Consensus        71 al~~aDvViia~~~~~~~g~---~r~d---l~~~n----~~i~~~i~~~i~~~~p------~a~~iv~tN  124 (316)
T 1ldn_A           71 DCRDADLVVICAGANQKPGE---TRLD---LVDKN----IAIFRSIVESVMASGF------QGLFLVATN  124 (316)
T ss_dssp             GTTTCSEEEECCSCCCCTTT---CSGG---GHHHH----HHHHHHHHHHHHHHTC------CSEEEECSS
T ss_pred             HhCCCCEEEEcCCCCCCCCC---CHHH---HHHcC----hHHHHHHHHHHHHHCC------CCEEEEeCC
Confidence            23478999999987543221   1111   23333    3455666666666542      466666544

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.32  E-value=0.0074  Score=52.36  Aligned_cols=73  Identities=19%  Similarity=0.331  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+||+|++|...+..+...|++|+.++++ ++. +.   +++.+.+. ++  |..+.+.+.+       ...++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~---~~~lGa~~-~i--~~~~~~~~~~-------~~~g~  216 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AF---LKALGAEQ-CI--NYHEEDFLLA-------ISTPV  216 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HH---HHHHTCSE-EE--ETTTSCHHHH-------CCSCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HH---HHHcCCCE-EE--eCCCcchhhh-------hccCC
Confidence            48999999999999999999888899999888753 332 22   33345442 22  3333221211       12589


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       217 D~v~d~~g  224 (321)
T 3tqh_A          217 DAVIDLVG  224 (321)
T ss_dssp             EEEEESSC
T ss_pred             CEEEECCC
Confidence            99999988

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.31  E-value=0.0056  Score=54.02  Aligned_cols=81  Identities=19%  Similarity=0.237  Sum_probs=60.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK-------------------QVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .|++++|+|.|+ ||+|..++..|+..|.. +.+++++.                   .+.+.+.+.+.+.+.  ++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            466889999998 78999999999999975 88888753                   356677777776653  56677


Q ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEEcCC
Q 022335           69 EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        69 ~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..+++...++..        +.+.|+||.+..
T Consensus       194 ~~~i~~~~~~~~--------~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLHK--------VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGGG--------SCCCSEEEECCC
T ss_pred             ecccCchhhhhH--------hccCCEEEEecC
Confidence            777776543222        458999998753

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.29  E-value=0.013  Score=50.23  Aligned_cols=85  Identities=13%  Similarity=0.099  Sum_probs=58.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA-------LRSLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+++.|+| .|.+|..++..|++.|++|++.+|++++.+.+.+.       +.+.-. ..++-.-+.++..++++++++.
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHH
Confidence            34688887 58899999999999999999999998876665431       111111 2333344556777888887777


Q ss_pred             HHcCCccEEEEcCC
Q 022335           87 EHFGKLDILVNAAA  100 (299)
Q Consensus        87 ~~~g~id~lv~~ag  100 (299)
                      ....+=.++|++..
T Consensus        93 ~~l~~g~ivv~~st  106 (296)
T 3qha_A           93 GHAKPGTVIAIHST  106 (296)
T ss_dssp             TTCCTTCEEEECSC
T ss_pred             HhcCCCCEEEEeCC
Confidence            65545567777654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.27  E-value=0.13  Score=44.46  Aligned_cols=114  Identities=11%  Similarity=0.122  Sum_probs=70.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEc-CCCCHHHHHHHHHHHHHHcCC
Q 022335           16 VALITGGGSGIGFEISTQFGKH-G--ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG-DVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~-G--~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~-Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++.|+||+|.+|..++..|+.+ +  ..+++++.++ ..+....++.+....+.+... .-.+.+.           +.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~-----------~~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA-----------LEG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHH-----------HTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHH-----------hCC
Confidence            5899999999999999999876 4  4699999987 455666666654333332221 1011222           237


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .|++|..+|....   ...+..   +.++.|..    +++.+.+.+.+..+      .+.|++++.
T Consensus        70 aDivii~ag~~rk---pG~~R~---dll~~N~~----I~~~i~~~i~~~~p------~a~vlvvtN  119 (312)
T 3hhp_A           70 ADVVLISAGVARK---PGMDRS---DLFNVNAG----IVKNLVQQVAKTCP------KACIGIITN  119 (312)
T ss_dssp             CSEEEECCSCSCC---TTCCHH---HHHHHHHH----HHHHHHHHHHHHCT------TSEEEECSS
T ss_pred             CCEEEEeCCCCCC---CCCCHH---HHHHHHHH----HHHHHHHHHHHHCC------CcEEEEecC
Confidence            8999999996432   123333   34555554    44444555555432      577777764

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.26  E-value=0.014  Score=52.21  Aligned_cols=78  Identities=18%  Similarity=0.210  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++.+    ++.+.+  .+  |.++.+.+.   +++.+..  
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~i--~~~~~~~~~---~~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFE--IA--DLSLDTPLH---EQIAALLGE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCE--EE--ETTSSSCHH---HHHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH----HHcCCc--EE--ccCCcchHH---HHHHHHhCC
Confidence            4889999995 9999998887777899 688899988776554    334543  23  333322222   2222222  


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      .++|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 PEVDCAVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCCCEEEECCCCc
Confidence            2699999999853

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.25  E-value=0.0023  Score=55.38  Aligned_cols=81  Identities=14%  Similarity=0.119  Sum_probs=54.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAV-GFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++.|++++|.|++.-+|+.+|+.|+..|++|.+++|+...+.+..+++   ....+ ...+..++++++.+.+.      
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~l---a~~~~~~t~~~~t~~~~L~e~l~------  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL---KLNKHHVEDLGEYSEDLLKKCSL------  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS---SCCCCEEEEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHH---hhhcccccccccccHhHHHHHhc------
Confidence            788999999999999999999999999999999988743211111111   11111 11111144566666666      


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                       .-|+||...|.
T Consensus       245 -~ADIVIsAtg~  255 (320)
T 1edz_A          245 -DSDVVITGVPS  255 (320)
T ss_dssp             -HCSEEEECCCC
T ss_pred             -cCCEEEECCCC
Confidence             46999999985

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.25  E-value=0.0076  Score=53.03  Aligned_cols=77  Identities=22%  Similarity=0.349  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++..    ++.+.+.. +  |-++.+    +.+++.+.. +
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v-i--~~~~~~----~~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA----LEYGATDI-I--NYKNGD----IVEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH----HHHTCCEE-E--CGGGSC----HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH----HHhCCceE-E--cCCCcC----HHHHHHHHcCC
Confidence            4889999986 8999998887777899 799999988765543    23343322 2  322222    223333333 2


Q ss_pred             -CccEEEEcCCC
Q 022335           91 -KLDILVNAAAG  101 (299)
Q Consensus        91 -~id~lv~~ag~  101 (299)
                       ++|+++.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             69999999884

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.24  E-value=0.02  Score=49.73  Aligned_cols=86  Identities=9%  Similarity=0.131  Sum_probs=58.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHh--cCCcEEEEEcCCCCHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA-------LRS--LGIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~-------~~~--~~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      .+.+++.|+|+ |.+|..++..|++.|++|++.+|++++.+.+.+.       +.+  ...++.+  .-+.++..++.++
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi--~~vp~~~~~~~v~  105 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVV--SMLENGAVVQDVL  105 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEE--ECCSSHHHHHHHH
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEE--EECCCHHHHHHHH
Confidence            34568888865 8999999999999999999999999887765432       111  1223333  3345566777777


Q ss_pred             H--HHHHHcCCccEEEEcCC
Q 022335           83 E--STFEHFGKLDILVNAAA  100 (299)
Q Consensus        83 ~--~~~~~~g~id~lv~~ag  100 (299)
                      .  .+.....+-.++|++..
T Consensus       106 ~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          106 FAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTTCHHHHCCTTCEEEECSC
T ss_pred             cchhHHhhCCCCCEEEecCC
Confidence            5  55555545566777654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.22  E-value=0.028  Score=50.30  Aligned_cols=43  Identities=14%  Similarity=0.206  Sum_probs=38.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAV   55 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~   55 (299)
                      +.+.+++|+|+ |.+|..+++.+...|++|++++++..+++...
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            56889999999 79999999999999999999999998766653

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.21  E-value=0.087  Score=46.13  Aligned_cols=109  Identities=9%  Similarity=0.142  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCChh--HHHHHHHHHHhcC--CcEEEEEcCCCCHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRKQ--VLDAAVSALRSLG--IKAVGFEGDVRRQEHA   78 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~~--~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v   78 (299)
                      ..++.-+|.|+||+|+||+.++..|+....       .+++++.++.  .++...-++.+..  .....+..+  +..  
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~--   95 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR--   95 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH--
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH--
Confidence            345567899999999999999999887643       6899998763  4566666776543  222222221  221  


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKG  140 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~  140 (299)
                              +.+.+-|++|-.||.....   ..+.++   .++.|..    +++.+.+.+.+.
T Consensus        96 --------~a~~~advVvi~aG~prkp---GmtR~D---Ll~~Na~----I~~~~~~~i~~~  139 (345)
T 4h7p_A           96 --------VAFDGVAIAIMCGAFPRKA---GMERKD---LLEMNAR----IFKEQGEAIAAV  139 (345)
T ss_dssp             --------HHTTTCSEEEECCCCCCCT---TCCHHH---HHHHHHH----HHHHHHHHHHHH
T ss_pred             --------HHhCCCCEEEECCCCCCCC---CCCHHH---HHHHhHH----HHHHHHHHHHhh
Confidence                    1234789999999975421   334444   3555554    556666666654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.21  E-value=0.0079  Score=50.17  Aligned_cols=77  Identities=8%  Similarity=0.026  Sum_probs=56.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +++|+|++|.+|+.+++.+.+. ++.|+.+....+.++.+..    ...+   +..|++.++.+.+.+..+.+.  ++++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~   72 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHA   72 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc--CCCE
Confidence            5899999999999999998866 8998765443333333221    1222   567999999998888877765  7888


Q ss_pred             EEEcCCC
Q 022335           95 LVNAAAG  101 (299)
Q Consensus        95 lv~~ag~  101 (299)
                      ||...|.
T Consensus        73 VigTTG~   79 (245)
T 1p9l_A           73 VVGTTGF   79 (245)
T ss_dssp             EECCCCC
T ss_pred             EEcCCCC
Confidence            8888774

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.18  E-value=0.015  Score=49.54  Aligned_cols=83  Identities=16%  Similarity=0.131  Sum_probs=56.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHhc--CCcEEEEEcCCCCHHHHHHHH---
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA-------LRSL--GIKAVGFEGDVRRQEHAKKVV---   82 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~-------~~~~--~~~v~~~~~Dl~~~~~v~~~~---   82 (299)
                      +++.|+|+ |.+|..++..|++.|++|++.+|++++.+.+.+.       +.+.  ..++.+  .-+.++..+++++   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi--~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTF--AMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEE--EEcCCHHHHHHHHcCc
Confidence            46888875 8999999999999999999999999877665431       1110  123333  3345567777777   


Q ss_pred             HHHHHHcCCccEEEEcCC
Q 022335           83 ESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag  100 (299)
                      +++.....+=.++|++.+
T Consensus        79 ~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             chHhhcCCCCCEEEeCCC
Confidence            666665544456777654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.17  E-value=0.026  Score=47.42  Aligned_cols=84  Identities=10%  Similarity=0.167  Sum_probs=56.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHH--------hc--CCcEEEEEcCCCCHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALR--------SL--GIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~--------~~--~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      +.++.|+|+ |.+|..++..|++.|++ |.+.+|+++..+.+.+.+.        +.  ..++.++.   ..+..+++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a---v~~~~~~~v~   85 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS---LKDSAFAELL   85 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC---CCHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe---cCHHHHHHHH
Confidence            457899997 99999999999999999 8899999988777665421        10  11222222   2345667777


Q ss_pred             HHHHHHcCCccEEEEcCCC
Q 022335           83 ESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~  101 (299)
                      +++.....+=.++|++.+.
T Consensus        86 ~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTT
T ss_pred             HHHHhhcCCCcEEEECCCC
Confidence            7776544333467777654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.12  E-value=0.0079  Score=52.56  Aligned_cols=72  Identities=13%  Similarity=0.079  Sum_probs=56.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+.++|.|+ |.+|+.+++.|.++|. |++++++++..+ ..    +  ..+.++..|.++++.+++.      ...+.|
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~--~~~~~i~gd~~~~~~L~~a------~i~~a~  179 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R--SGANFVHGDPTRVSDLEKA------NVRGAR  179 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H--TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h--CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence            457999997 8999999999999999 999999988766 32    2  2478899999999887764      123678


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      .+|...+
T Consensus       180 ~vi~~~~  186 (336)
T 1lnq_A          180 AVIVDLE  186 (336)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8888754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.12  E-value=0.0053  Score=52.22  Aligned_cols=72  Identities=21%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++++++|+|+ |++|++++..|.+.|++|++++|+.++.+++.+++   +  +.+  .+  +   ..+.       ..
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g--~~~--~~--~---~~~~-------~~  185 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---P--LEV--VN--S---PEEV-------ID  185 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---C--EEE--CS--C---GGGT-------GG
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---C--Cee--eh--h---HHhh-------hc
Confidence            467899999996 79999999999999999999999987766554322   2  221  11  1   1111       23


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      ..|+||++....
T Consensus       186 ~aDiVi~atp~~  197 (275)
T 2hk9_A          186 KVQVIVNTTSVG  197 (275)
T ss_dssp             GCSEEEECSSTT
T ss_pred             CCCEEEEeCCCC
Confidence            689999998754

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.11  E-value=0.2  Score=43.17  Aligned_cols=111  Identities=11%  Similarity=0.090  Sum_probs=72.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++.|+|+ |.+|..++..|+.++  ..|+++|.++++++....++.+..   .++.+.. +  +.+.           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hC
Confidence            6899998 999999999999887  579999999988887777775531   2333332 2  2111           34


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .-|++|..+|.....   ..+..+   .+..|.    -+++.+.+.+.+..+      .+.|+++|.
T Consensus        67 ~aD~Vii~ag~~~~~---g~~r~d---l~~~n~----~i~~~i~~~i~~~~p------~a~iiv~tN  117 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP---GETRLQ---LLDRNA----QVFAQVVPRVLEAAP------EAVLLVATN  117 (310)
T ss_dssp             TEEEEEECCCCCCCT---TCCHHH---HHHHHH----HHHHHHHHHHHHHCT------TCEEEECSS
T ss_pred             CCCEEEECCCCCCCC---CcCHHH---HHHhhH----HHHHHHHHHHHHHCC------CcEEEEecC
Confidence            789999999865321   223322   234443    345555666666543      577888754

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.09  E-value=0.17  Score=43.98  Aligned_cols=113  Identities=12%  Similarity=-0.001  Sum_probs=73.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc---CCcEEEE-EcCCCCHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL---GIKAVGF-EGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~v~~~-~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+++.|+|+ |.+|..++..|+.+|.  .|++++.+++.++....++.+.   .....+. ..|..+             
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------------   86 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------------   86 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------------
Confidence            578999999 9999999999999997  7999999998888877766543   1111222 233221             


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                       +..-|++|..+|......   .+..   +.+..|.    .+.+.+.+.+.+..+      .+.++++|.
T Consensus        87 -~~daDiVIitaG~p~kpG---~tR~---dll~~N~----~I~k~i~~~I~k~~P------~a~ilvvtN  139 (330)
T 3ldh_A           87 -SAGSKLVVITAGARQQEG---ESRL---NLVQRNV----NIFKFIIPNIVKHSP------DCLKELHPE  139 (330)
T ss_dssp             -CSSCSEEEECCSCCCCSS---CCTT---GGGHHHH----HHHHHHHHHHHHHCT------TCEEEECSS
T ss_pred             -hCCCCEEEEeCCCCCCCC---CCHH---HHHHhhH----HHHHHHHHHHHhhCC------CceEEeCCC
Confidence             236899999999753221   1111   1233333    345555666665542      577777775

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.08  E-value=0.017  Score=49.13  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=37.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVS   56 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~   56 (299)
                      +++.|+|++|.+|.+++..|++.|++|++++|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999999887766543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.04  E-value=0.013  Score=49.39  Aligned_cols=69  Identities=29%  Similarity=0.364  Sum_probs=51.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++| +++|+|+ |++|++++..|.+.|++|++++|+.++.+.+.+++   +..       ..+.+   ++        .
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~---~~~-------~~~~~---~~--------~  170 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF---GLR-------AVPLE---KA--------R  170 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH---TCE-------ECCGG---GG--------G
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccc-------hhhHh---hc--------c
Confidence            4678 8999997 77999999999999999999999988777766554   221       11211   11        2


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      ..|+||++.+..
T Consensus       171 ~~Divi~~tp~~  182 (263)
T 2d5c_A          171 EARLLVNATRVG  182 (263)
T ss_dssp             GCSEEEECSSTT
T ss_pred             CCCEEEEccCCC
Confidence            689999998754

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.02  E-value=0.09  Score=45.32  Aligned_cols=73  Identities=12%  Similarity=0.163  Sum_probs=51.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL------GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +++.|+|+ |.+|..++..|+..|. +|++++.++++++....++.+.      ..++... .|.   +           
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~---~-----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NNY---A-----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CCH---H-----------
Confidence            46999999 9999999999999997 8999999988777666666442      1223221 221   1           


Q ss_pred             HcCCccEEEEcCCCCC
Q 022335           88 HFGKLDILVNAAAGNF  103 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~  103 (299)
                      .+...|++|..+|...
T Consensus        67 a~~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           67 DTANSDVIVVTSGAPR   82 (309)
T ss_dssp             GGTTCSEEEECCCC--
T ss_pred             HHCCCCEEEEcCCCCC
Confidence            1336899999998643

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.92  E-value=0.11  Score=45.04  Aligned_cols=73  Identities=14%  Similarity=0.135  Sum_probs=52.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL------GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +++.|+|+ |.+|..++..|+..|. +|++++++++.++....++.+.      ..++... .|.              +
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~--------------~   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY--------------D   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG--------------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH--------------H
Confidence            47999998 9999999999999998 8999999998887665555432      2223321 221              1


Q ss_pred             HcCCccEEEEcCCCCC
Q 022335           88 HFGKLDILVNAAAGNF  103 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~  103 (299)
                      .+...|++|..+|...
T Consensus        69 al~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTK   84 (322)
T ss_dssp             GGTTCSEEEECCSCSS
T ss_pred             HhCCCCEEEEeCCCCC
Confidence            1347899999998643

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.89  E-value=0.13  Score=44.03  Aligned_cols=40  Identities=20%  Similarity=0.362  Sum_probs=35.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAV   55 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~   55 (299)
                      +++.|+|+ |.+|.++|..|++.|++|++++++++.++...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            57899998 89999999999999999999999998777643

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.87  E-value=0.019  Score=49.12  Aligned_cols=71  Identities=20%  Similarity=0.420  Sum_probs=51.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.|++++|.|+ |+||+++++.|...|++|++++|+.++.+..    .+.+.+  .+.     .++++++       +.
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~----~~~g~~--~~~-----~~~l~~~-------l~  212 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI----AEMGME--PFH-----ISKAAQE-------LR  212 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTSE--EEE-----GGGHHHH-------TT
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHCCCe--ecC-----hhhHHHH-------hc
Confidence            578999999995 8999999999999999999999998664433    223322  221     1222222       34


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ..|+|+++..
T Consensus       213 ~aDvVi~~~p  222 (293)
T 3d4o_A          213 DVDVCINTIP  222 (293)
T ss_dssp             TCSEEEECCS
T ss_pred             CCCEEEECCC
Confidence            7899999875

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.87  E-value=0.041  Score=44.52  Aligned_cols=76  Identities=17%  Similarity=0.172  Sum_probs=53.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+..+++.|.| .|.+|.+++..|++.|++|++.+|+++         .-...++.++.+-   ...++++++++...+.
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~~~~~   82 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYATQLK   82 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTHHHHT
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHHHhcC
Confidence            35677899999 799999999999999999999999875         1123456666543   6777888887766554


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                       =.++|+.+.
T Consensus        83 -~~~vi~~~~   91 (209)
T 2raf_A           83 -GKIVVDITN   91 (209)
T ss_dssp             -TSEEEECCC
T ss_pred             -CCEEEEECC
Confidence             235666543

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.87  E-value=0.0022  Score=57.60  Aligned_cols=46  Identities=17%  Similarity=0.233  Sum_probs=38.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEE-EEeC----------ChhHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVA-IMGR----------RKQVLDAAVSA   57 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv-~~~r----------~~~~~~~~~~~   57 (299)
                      +++|++++|+| .|.+|..+++.|++.|++|+ +.++          +.+.+.+..++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            57899999998 89999999999999999999 6666          55666665554

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.86  E-value=0.0079  Score=52.35  Aligned_cols=41  Identities=24%  Similarity=0.325  Sum_probs=35.4

Q ss_pred             CC-EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           14 GK-VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        14 ~k-~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      |. ++||+|++|++|..++..+...|++|+++++++++++.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            44 799999999999999998888999999999987766554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.84  E-value=0.0095  Score=50.55  Aligned_cols=38  Identities=29%  Similarity=0.393  Sum_probs=34.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .++||.++|+|.++-+|+.++..|..+|++|.++.++.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            57899999999999999999999999999999988653

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.83  E-value=0.32  Score=41.52  Aligned_cols=112  Identities=11%  Similarity=0.055  Sum_probs=74.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+.|+|+ |+||..++..|+.++.  .++++|.+++..+..+.++.+.    +....+...+  +.+           .+
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------Hh
Confidence            4788895 9999999999998864  4999999998888877777652    3333333321  111           13


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..||.....   ..+.++   .++.|..    +++.+.+.+.+..+      .+.|+.+|.
T Consensus        68 ~~aDvVvitAG~prkp---GmtR~d---Ll~~Na~----I~~~i~~~i~~~~p------~aivlvvsN  119 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKP---GMTRLD---LAHKNAG----IIKDIAKKIVENAP------ESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCS---SSCHHH---HHHHHHH----HHHHHHHHHHTTST------TCEEEECSS
T ss_pred             CCCCEEEEecCCCCCC---CCchHH---HHHHHHH----HHHHHHHHHHhcCC------ceEEEEecC
Confidence            4689999999965422   234443   3555554    56666777776653      566666665

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.83  E-value=0.044  Score=48.82  Aligned_cols=76  Identities=18%  Similarity=0.264  Sum_probs=53.8

Q ss_pred             CCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            6 PFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         6 ~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +|+...+.||+++|+|++ .+|+.+++.+.+.|++|++++.++...        .....-..+..|..+.+.+.++++  
T Consensus         6 ~m~~~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~--------~~~~ad~~~~~~~~d~~~l~~~~~--   74 (389)
T 3q2o_A            6 DMTRIILPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSP--------CAQVADIEIVASYDDLKAIQHLAE--   74 (389)
T ss_dssp             -CCCCCCTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCT--------TTTTCSEEEECCTTCHHHHHHHHH--
T ss_pred             cccccCCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCc--------hHHhCCceEecCcCCHHHHHHHHH--
Confidence            444556789999999876 599999999999999999998765310        001011245578888888888776  


Q ss_pred             HHHcCCccEEEE
Q 022335           86 FEHFGKLDILVN   97 (299)
Q Consensus        86 ~~~~g~id~lv~   97 (299)
                           ..|++..
T Consensus        75 -----~~dvI~~   81 (389)
T 3q2o_A           75 -----ISDVVTY   81 (389)
T ss_dssp             -----TCSEEEE
T ss_pred             -----hCCEeee
Confidence                 4677644

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.81  E-value=0.089  Score=45.22  Aligned_cols=72  Identities=10%  Similarity=0.161  Sum_probs=49.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++.|+|+ |.+|..++..|+.+|.  .|+++++++++++....++.+..   ....+.. +  +.           +.+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~-----------~a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GH-----------SELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CG-----------GGGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CH-----------HHhC
Confidence            6889998 9999999999999998  89999999887776555553321   1222221 1  11           1234


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      ..|++|..+|..
T Consensus        67 ~aDvVIi~~~~~   78 (304)
T 2v6b_A           67 DAQVVILTAGAN   78 (304)
T ss_dssp             TCSEEEECC---
T ss_pred             CCCEEEEcCCCC
Confidence            789999999854

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.79  E-value=0.022  Score=49.20  Aligned_cols=85  Identities=16%  Similarity=0.067  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHhc--CCcEEEEEcCCCCHHHHHHHH-
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA-------LRSL--GIKAVGFEGDVRRQEHAKKVV-   82 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~-------~~~~--~~~v~~~~~Dl~~~~~v~~~~-   82 (299)
                      +.+++.|+| .|.+|..++..|++.|++|++.+|++++.+.+.+.       +.+.  ..++.+  .-+.++..+++++ 
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi--~~vp~~~~~~~v~~   96 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTI--AMLSDPCAALSVVF   96 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEE--ECCSSHHHHHHHHH
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEE--EEcCCHHHHHHHHh
Confidence            346788887 58999999999999999999999999877665431       0110  123333  3344566666666 


Q ss_pred             --HHHHHHcCCccEEEEcCC
Q 022335           83 --ESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        83 --~~~~~~~g~id~lv~~ag  100 (299)
                        +++.....+=.++|++..
T Consensus        97 ~~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           97 DKGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             STTCGGGGCCTTCEEEECSC
T ss_pred             CchhhhhccCCCCEEEECCC
Confidence              444444434456666654

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.77  E-value=0.15  Score=44.02  Aligned_cols=73  Identities=16%  Similarity=0.203  Sum_probs=50.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL------GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +++.|+|+ |.+|.+++..|+++|. +|++++++++.++....++...      ..++... .|.   +           
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~---~-----------   68 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DDY---A-----------   68 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SCG---G-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CCH---H-----------
Confidence            57999998 9999999999999998 9999999987777643333211      2223221 221   1           


Q ss_pred             HcCCccEEEEcCCCCC
Q 022335           88 HFGKLDILVNAAAGNF  103 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~  103 (299)
                      .+...|++|.++|...
T Consensus        69 a~~~aDiVi~avg~p~   84 (317)
T 2ewd_A           69 DISGSDVVIITASIPG   84 (317)
T ss_dssp             GGTTCSEEEECCCCSS
T ss_pred             HhCCCCEEEEeCCCCC
Confidence            1236899999998643

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.76  E-value=0.025  Score=49.95  Aligned_cols=86  Identities=10%  Similarity=0.141  Sum_probs=57.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH----------HH-Hhc-CCcEEEEEcCCCCHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVS----------AL-RSL-GIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~----------~~-~~~-~~~v~~~~~Dl~~~~~v~   79 (299)
                      ++++++.|+| .|.+|..++..|++.|++|++.+|++++.+.+.+          ++ ... ..++.++.+  ... .++
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~v--p~~-~v~   95 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMV--PAA-VVD   95 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECS--CGG-GHH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeC--CHH-HHH
Confidence            4577899998 6899999999999999999999999987766532          11 111 114444433  222 666


Q ss_pred             HHHHHHHHHcCCccEEEEcCCC
Q 022335           80 KVVESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        80 ~~~~~~~~~~g~id~lv~~ag~  101 (299)
                      ++++++...+.+=+++|.+...
T Consensus        96 ~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           96 SMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHhhCCCCCEEEeCCCC
Confidence            7777666655445677776543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.73  E-value=0.059  Score=46.99  Aligned_cols=79  Identities=14%  Similarity=0.134  Sum_probs=50.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeE-EEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASV-AIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~V-v~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ..|.+++|+|+ |++|...+..+...|+.+ +++++++++++.    +++.+....+..-| .+..   +....+ ....
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~----a~~lGa~~~i~~~~-~~~~---~~~~~~-~~~~  228 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL----AKSFGAMQTFNSSE-MSAP---QMQSVL-RELR  228 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHHTTCSEEEETTT-SCHH---HHHHHH-GGGC
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH----HHHcCCeEEEeCCC-CCHH---HHHHhh-cccC
Confidence            35899999987 899999888888889885 567788766443    33455444332222 2222   222222 2235


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      .+|+++.++|
T Consensus       229 g~d~v~d~~G  238 (346)
T 4a2c_A          229 FNQLILETAG  238 (346)
T ss_dssp             SSEEEEECSC
T ss_pred             Cccccccccc
Confidence            7899999987

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.65  E-value=0.033  Score=52.21  Aligned_cols=61  Identities=20%  Similarity=0.318  Sum_probs=46.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEE
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGI--KAVGF   68 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~v~~~   68 (299)
                      .+++.+|+|.|+ ||+|.++++.|+..|.. +.++|.+                   ..+.+.+++.+++.+.  ++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            466889999986 58999999999999985 7888654                   2577888888887654  45556


Q ss_pred             EcCC
Q 022335           69 EGDV   72 (299)
Q Consensus        69 ~~Dl   72 (299)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            5554

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.63  E-value=0.045  Score=47.77  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=47.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC-
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG-   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g-   90 (299)
                      .|.++||+|+ |++|...+..+... |++|+++++++++++.    .++.+....+   |-++.+.++    ++.+..+ 
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~----~~~~Ga~~~i---~~~~~~~~~----~v~~~t~g  230 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL----AKKIGADVTI---NSGDVNPVD----EIKKITGG  230 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH----HHHTTCSEEE---EC-CCCHHH----HHHHHTTS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh----hhhcCCeEEE---eCCCCCHHH----HhhhhcCC
Confidence            4889999987 67777666666654 8889999999876543    2344544333   223322222    2333332 


Q ss_pred             -CccEEEEcCC
Q 022335           91 -KLDILVNAAA  100 (299)
Q Consensus        91 -~id~lv~~ag  100 (299)
                       ++|.++.+++
T Consensus       231 ~g~d~~~~~~~  241 (348)
T 4eez_A          231 LGVQSAIVCAV  241 (348)
T ss_dssp             SCEEEEEECCS
T ss_pred             CCceEEEEecc
Confidence             5788888876

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.60  E-value=0.019  Score=48.42  Aligned_cols=36  Identities=11%  Similarity=0.152  Sum_probs=33.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR   47 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~   47 (299)
                      ++|++++|.|.++-+|+.++..|...|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            789999999999999999999999999999998764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.59  E-value=0.051  Score=46.56  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=53.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .+++.|+||.|.+|.+++..|++.|++|++++|+++.  ...+.+  ...++.++.+-...   +.++++++...+.+=.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~--~~aDvVilavp~~~---~~~vl~~l~~~l~~~~   93 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESIL--ANADVVIVSVPINL---TLETIERLKPYLTENM   93 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHH--TTCSEEEECSCGGG---HHHHHHHHGGGCCTTS
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHh--cCCCEEEEeCCHHH---HHHHHHHHHhhcCCCc
Confidence            4579999999999999999999999999999998653  111112  23567776654333   6666666654443223


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      +|++.++
T Consensus        94 iv~~~~s  100 (298)
T 2pv7_A           94 LLADLTS  100 (298)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            5555554

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.58  E-value=0.11  Score=47.74  Aligned_cols=42  Identities=19%  Similarity=0.340  Sum_probs=36.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA   57 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~   57 (299)
                      +++.|+|+ |.+|..||..|++.|++|++.+++++.++...+.
T Consensus         6 ~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~   47 (483)
T 3mog_A            6 QTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG   47 (483)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence            35777766 8999999999999999999999999988876654

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.54  E-value=0.26  Score=43.33  Aligned_cols=82  Identities=10%  Similarity=0.076  Sum_probs=54.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH---------------------h--cCCcEEEEEc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR---------------------S--LGIKAVGFEG   70 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~---------------------~--~~~~v~~~~~   70 (299)
                      .+++.|.|+ |.+|.+++..|++.|++|.+.+|+++..+.+.+.-.                     +  .+.++.++. 
T Consensus        29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila-  106 (356)
T 3k96_A           29 KHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV-  106 (356)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC-
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC-
Confidence            346889986 899999999999999999999999887776654310                     0  012222222 


Q ss_pred             CCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           71 DVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        71 Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                        .....++++++++.....+=.++|.+.
T Consensus       107 --Vp~~~~~~vl~~i~~~l~~~~ivvs~~  133 (356)
T 3k96_A          107 --VPSFAFHEVITRMKPLIDAKTRIAWGT  133 (356)
T ss_dssp             --CCHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred             --CCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence              134567777877766554334566654

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=95.53  E-value=0.14  Score=46.89  Aligned_cols=121  Identities=17%  Similarity=0.157  Sum_probs=71.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-----CCeEEEEeCChhHHHHHHHHHH----hcCCcEEEEEcCCCCHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-----GASVAIMGRRKQVLDAAVSALR----SLGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-----G~~Vv~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      +.+++.|.||++..|.+++..|+.+     +..|++.++++++++...+...    ..+....+...  +|.   ++.+ 
T Consensus        27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t--~D~---~eal-  100 (472)
T 1u8x_X           27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEAF-  100 (472)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHHH-
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE--CCH---HHHH-
Confidence            3568999999988888899889988     6679999999988776543222    22223332221  122   1222 


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhh----------------hHHHHHHHHHHHHHHHhcCCCCCCC
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDID----------------SVGTFTMCHEALKYLKKGGPGRSSA  147 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~~~~m~~~~~~~~~~  147 (299)
                            .+-|+||..+|....      +...-++.+..+                ..-..-+++.+.+.+.+..+     
T Consensus       101 ------~~AD~VViaag~~~~------~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P-----  163 (472)
T 1u8x_X          101 ------TDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP-----  163 (472)
T ss_dssp             ------SSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-----
T ss_pred             ------cCCCEEEEcCCCccc------cccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCC-----
Confidence                  368999999985321      111111221111                22334456677777777654     


Q ss_pred             CCceEEEecc
Q 022335          148 GGGSILNISA  157 (299)
Q Consensus       148 ~~g~iv~vsS  157 (299)
                       .+-||++|.
T Consensus       164 -~A~ii~~TN  172 (472)
T 1u8x_X          164 -DAWMLNYSN  172 (472)
T ss_dssp             -TCEEEECCS
T ss_pred             -CeEEEEeCC
Confidence             566776665

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.53  E-value=0.07  Score=46.22  Aligned_cols=112  Identities=13%  Similarity=0.063  Sum_probs=65.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .++.|+|+ |.+|..++..|+..|.  .|+++|.++++++....++.+..   .++.+..   .+           .+.+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~-----------~~a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD-----------YSDV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC-----------HHHh
Confidence            46999998 9999999999999987  89999999877776666664431   1222221   11           1124


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..+|.....   ..+..   +.+..|+.-    ++.+.+.+.+..+      .+.|++++.
T Consensus        73 ~~aDvVii~~g~p~k~---g~~r~---dl~~~n~~i----~~~i~~~i~~~~p------~a~viv~tN  124 (318)
T 1y6j_A           73 KDCDVIVVTAGANRKP---GETRL---DLAKKNVMI----AKEVTQNIMKYYN------HGVILVVSN  124 (318)
T ss_dssp             TTCSEEEECCCC---------CHH---HHHHHHHHH----HHHHHHHHHHHCC------SCEEEECSS
T ss_pred             CCCCEEEEcCCCCCCC---CcCHH---HHHHhhHHH----HHHHHHHHHHhCC------CcEEEEecC
Confidence            4789999999864311   11222   334555544    4444445444332      566777543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.53  E-value=0.055  Score=48.03  Aligned_cols=72  Identities=13%  Similarity=0.185  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..+.+++++|+|+ |.+|+.+++.+.+.|++|++++.++...   ..   +..  -..+..|..|.+.+.++++.     
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p---~~---~~a--d~~~~~~~~d~~~l~~~~~~-----   73 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCP---CR---YVA--HEFIQAKYDDEKALNQLGQK-----   73 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCT---TG---GGS--SEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh---hh---hhC--CEEEECCCCCHHHHHHHHHh-----
Confidence            3567999999985 5799999999999999999999865411   00   111  13566899999998888763     


Q ss_pred             CCccEEEE
Q 022335           90 GKLDILVN   97 (299)
Q Consensus        90 g~id~lv~   97 (299)
                        +|+++.
T Consensus        74 --~dvi~~   79 (377)
T 3orq_A           74 --CDVITY   79 (377)
T ss_dssp             --CSEEEE
T ss_pred             --CCccee
Confidence              677644

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.50  E-value=0.0098  Score=54.54  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=51.1

Q ss_pred             CCEEEEecCCC-hHHHHHHHHHHHc----CCeEEEEeCChhHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHH
Q 022335           14 GKVALITGGGS-GIGFEISTQFGKH----GASVAIMGRRKQVLDAAVSALRS----LGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        14 ~k~vlItGas~-giG~aia~~la~~----G~~Vv~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .+++.|.||++ |.|.+++..|++.    |..|++.+++++.++...+....    ......+...  +|.   ++.+  
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~t--tD~---~eal--   75 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNL---DDVI--   75 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCH---HHHH--
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEE--CCH---HHHh--
Confidence            45799999999 8999999988854    78899999999887775444332    1222222221  222   1222  


Q ss_pred             HHHHcCCccEEEEcCCC
Q 022335           85 TFEHFGKLDILVNAAAG  101 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~  101 (299)
                           .+-|+||..+|.
T Consensus        76 -----~dAD~VIiaagv   87 (480)
T 1obb_A           76 -----IDADFVINTAMV   87 (480)
T ss_dssp             -----TTCSEEEECCCT
T ss_pred             -----CCCCEEEECCCc
Confidence                 368999999975

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.49  E-value=0.12  Score=44.57  Aligned_cols=110  Identities=11%  Similarity=0.135  Sum_probs=70.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc----CCcEEEEE-cCCCCHHHHHHHHHHHHHHcC
Q 022335           17 ALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL----GIKAVGFE-GDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +.|+|+ |.+|..++..|+..|. .|++++.++++++....++.+.    +....+.. .|   .+           .+.
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d---~~-----------a~~   66 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNS---YE-----------DMR   66 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC---GG-----------GGT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCC---HH-----------HhC
Confidence            789998 9999999999998887 5999999998887766666442    22222222 23   11           134


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..|++|..+|.....   ..+..   +.+..|.    -+.+.+.+.+.+..+      .+.||++|.
T Consensus        67 ~aD~Vi~~ag~~~k~---G~~r~---dl~~~n~----~i~~~i~~~i~~~~p------~a~iiv~tN  117 (308)
T 2d4a_B           67 GSDIVLVTAGIGRKP---GMTRE---QLLEANA----NTMADLAEKIKAYAK------DAIVVITTN  117 (308)
T ss_dssp             TCSEEEECCSCCCCS---SCCTH---HHHHHHH----HHHHHHHHHHHHHCT------TCEEEECCS
T ss_pred             CCCEEEEeCCCCCCC---CCcHH---HHHHHHH----HHHHHHHHHHHHHCC------CeEEEEeCC
Confidence            789999999865422   12222   2233333    355566666665432      577777755

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	299
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-66
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	7e-66
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-62
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-61
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-60
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-59
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-58
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	5e-58
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	7e-58
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-57
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-57
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-56
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-56
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-56
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	8e-56
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	9e-56
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-55
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-55
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-55
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	8e-55
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	8e-55
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-54
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-53
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	4e-53
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-53
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	8e-53
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-52
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-52
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-52
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	9e-50
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	9e-50
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-49
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-49
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	6e-49
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	8e-49
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-48
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-48
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-48
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-47
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-47
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-47
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	4e-47
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	6e-47
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-46
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-46
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	7e-44
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-43
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-43
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-43
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	6e-42
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	8e-42
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-37
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-36
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-36
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	7e-35
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-34
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-32
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-30
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-29
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-29
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-26
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-23
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-22
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	9e-22
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-19
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-14
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	6e-14
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	3e-13
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.002

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  206 bits (526), Expect = 1e-66
 Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 12/253 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K+A+ITGG +GIG  I+ +F   GA +AI          A +A+R+LG + +  + D
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +    +   +     FG+ DILVN A    L+  ++L+   ++   +I+    F M  
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +  +K+        G G I+N+++T ++       H  + KAA    TR LA +    
Sbjct: 121 AFVPGMKR-------NGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDL-GK 172

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-PLYKLGEKWDIAMAALYLTSDTGK 250
             I VN IAP  +  T      A   +     + +  + +L    D+  AA +L SD   
Sbjct: 173 DGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDAS 231

Query: 251 YVNGTTLIVDGGL 263
           ++ G TL VDGG+
Sbjct: 232 FITGQTLAVDGGM 244

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  204 bits (521), Expect = 7e-66
 Identities = 72/263 (27%), Positives = 114/263 (43%), Gaps = 10/263 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K  L+TGG  GIG  I  +F   GA +    R +  L+  +S  +  G +  G   D
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
              +   +K++++    F GKLDIL+N           D +   F   +  +    + + 
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 125

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A   LK  G G        I+ +S+     ++      +A K A++ + RNLA EW A
Sbjct: 126 QLAHPLLKASGCGN-------IIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEW-A 177

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
              IR N +AP  I  TP    +  DE         PL + GE  +++    +L      
Sbjct: 178 SDGIRANAVAPAVI-ATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAAS 236

Query: 251 YVNGTTLIVDGGLWLSRPRHLPK 273
           Y+ G T+ VDGGL ++   + P+
Sbjct: 237 YITGQTICVDGGLTVNGFSYQPQ 259

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  196 bits (500), Expect = 1e-62
 Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 20/258 (7%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEG 70
           +  GK  L+TGG  GIG  I+  F + GA VA+   R +  + A +      I    F+ 
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA------IGGAFFQV 55

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+  +    + VE      G++D+LVN AA     SA  +    +R V++++      + 
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A + ++K G G        I+N+++     A        A+K  +  +TR+LAL+  A
Sbjct: 116 ALAAREMRKVGGGA-------IVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDL-A 167

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
              IRVN +APG I  T  + +       P+       D   L +LG+  ++A A L+L 
Sbjct: 168 PLRIRVNAVAPGAI-ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 226

Query: 246 SDTGKYVNGTTLIVDGGL 263
           S+   ++ G  L VDGG+
Sbjct: 227 SEKASFITGAILPVDGGM 244

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  194 bits (493), Expect = 1e-61
 Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVA+ITGG  GIG  I+T+F + GA V I GR   V + A  ++ +   +   F+ D
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
              ++   K+ ++T + FG +  LVN A      S E+ +   +R ++ ++  G F    
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG-A 190
             ++ +K  G       G SI+N+S+   +          A+K AV  ++++ AL+    
Sbjct: 123 LGIQRMKNKGL------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK 176

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           DYD+RVN + PG I  TP ++ L   E     R   P+  +GE  DIA   +YL S+  K
Sbjct: 177 DYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESK 235

Query: 251 YVNGTTLIVDGGL 263
           +  G+  +VDGG 
Sbjct: 236 FATGSEFVVDGGY 248

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  190 bits (483), Expect = 4e-60
 Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 17/258 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+GKVAL+TGG SG+G E+       GA VA     +       +    LG +++    D
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAE---LGERSMFVRHD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +     V+ +     G L++LVN A        E      F  ++ I++   F  C 
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           + +  +K+         GGSI+N+++   +         +A+KAAV A+TR  AL     
Sbjct: 121 QGIAAMKE--------TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQ 172

Query: 192 -YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTS 246
            Y IRVN I P  I  TP M    P  ++ +   +        +      IA   L+L S
Sbjct: 173 GYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS 231

Query: 247 DTGKYVNGTTLIVDGGLW 264
           D    ++G+ L  D  + 
Sbjct: 232 DESSVMSGSELHADNSIL 249

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (480), Expect = 1e-59
 Identities = 53/256 (20%), Positives = 99/256 (38%), Gaps = 12/256 (4%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI--KAVGFE 69
            + ++AL+TG   GIG  ++    + G  V    R    ++   +  +S G     + + 
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
            D+  +E    +  +       +DI +N A      +    S +G++ + +++ +     
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 127

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA--AAKAAVDAITRNLALE 187
             EA + +K+          G I+NI++   +      +     A K AV A+T  L  E
Sbjct: 128 TREAYQSMKERN-----VDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 182

Query: 188 W-GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
              A   IR   I+PG + +T        D+   KA       K  +  D+A A +Y+ S
Sbjct: 183 LREAQTHIRATCISPGVV-ETQ-FAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLS 240

Query: 247 DTGKYVNGTTLIVDGG 262
                  G   +   G
Sbjct: 241 TPAHIQIGDIQMRPTG 256

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  186 bits (473), Expect = 1e-58
 Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 14/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+G  AL+TGG  GIG+ I  +    GASV    R ++ L+  ++  RS G K      D
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  +   ++++ +   HF GKL+ILVN A       A+D +   +  +M I+    + + 
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A  +LK           G+++ IS+     A  Y+    A K A+D +TR LA EW A
Sbjct: 126 VLAHPFLKAS-------ERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEW-A 177

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYLTS 246
             +IRVNG+ PG I  T  +     D    +  + +     L ++GE  ++A    +L  
Sbjct: 178 KDNIRVNGVGPGVI-ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF 236

Query: 247 DTGKYVNGTTLIVDGGL 263
               YV G  + VDGGL
Sbjct: 237 PAASYVTGQIIYVDGGL 253

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (469), Expect = 5e-58
 Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 21/260 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GKV ++TGGG GIG  I   F   GA V I  + +    A    L      AV    D
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVS-AEDLSPNGFRTVMDIDSVGTFTMC 130
           V +++  K +V  T   FG+LD +VN A  +      E+ S  GFR +++++ +GT+T+ 
Sbjct: 60  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             AL YL+K          G+++NIS+ +        +   A K AV A+T+ LAL+  +
Sbjct: 120 KLALPYLRK--------SQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDE-S 170

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            Y +RVN I+PG I  TP   +LA     P     +     PL ++G+  ++  AA++L 
Sbjct: 171 PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA 229

Query: 246 SDTGKYVNGTTLIVDGGLWL 265
           S+   +  G  L+V GG  L
Sbjct: 230 SE-ANFCTGIELLVTGGAEL 248

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  184 bits (469), Expect = 7e-58
 Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 25/270 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGF 68
              K  +ITG  +GIG   +  F + GA+V I GR  + L+     +   G+   +    
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSV 124
             DV  ++   +++ ST + FGK+D+LVN A       F  +  D   + +   + ++  
Sbjct: 63  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
               M  +   +L           G  +   S      A    ++ A AKAA+D  TR+ 
Sbjct: 123 AVIEMTKKVKPHLVAS-------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRST 175

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYM-------PLYKLGEKWD 236
           A++  A + IRVN ++PG + +T   N +  PD+ + K  ++M       P+   G+   
Sbjct: 176 AIDL-AKFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH 233

Query: 237 IAMAALYLTS-DTGKYVNGTTLIVDGGLWL 265
           IA   L+L   +   Y+ G +++ DGG  L
Sbjct: 234 IANIILFLADRNLSFYILGQSIVADGGTSL 263

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  183 bits (466), Expect = 2e-57
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 25/270 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI---KAVGF 68
              KVA+ITG  +GIG   +  F + GA V I GR  + L+     + + G+        
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAA----GNFLVSAEDLSPNGFRTVMDIDSV 124
             DV       +++ +T   FGKLDILVN A      +   +    S   +   ++++  
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122

Query: 125 GTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNL 184
               +  +A+ +L           G  +   S      A+    + + AKAA+D  TRN 
Sbjct: 123 SVIALTKKAVPHLSST-------KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNT 175

Query: 185 ALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--------RDYMPLYKLGEKWD 236
           A++    + IRVN I+PG +  T   + +   E  SK         ++ +P   +G+  D
Sbjct: 176 AIDL-IQHGIRVNSISPGLV-ATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD 233

Query: 237 IAMAALYLTS-DTGKYVNGTTLIVDGGLWL 265
           IA    +L    T  Y+ G  L+VDGG  L
Sbjct: 234 IAEVIAFLADRKTSSYIIGHQLVVDGGSSL 263

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  182 bits (463), Expect = 3e-57
 Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 10/252 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            + KVAL+TG G GIG EI+    K  + V  + R ++  D+ V  ++S G ++ G+ GD
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V ++E   +V+         +DILVN A          +  + +  V+  +    F +  
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              K +            G I+NIS+ +  T +  Q + +++KA V   T++LA E  A 
Sbjct: 128 PISKRMINN-------RYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKEL-AS 179

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
            +I VN IAPG I  +  M     ++I       +P  ++G   ++A  A +L+SD   Y
Sbjct: 180 RNITVNAIAPGFI--SSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY 237

Query: 252 VNGTTLIVDGGL 263
           +NG   ++DGGL
Sbjct: 238 INGRVFVIDGGL 249

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  180 bits (459), Expect = 1e-56
 Identities = 83/258 (32%), Positives = 116/258 (44%), Gaps = 15/258 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK  +ITGG  G+G E + Q    GA V +     +   A     R LG  A     D
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA---RELGDAARYQHLD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  +E  ++VV    E FG +D LVN A  +  +  E  S   FR V++I+  G F    
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +  +K        AGGGSI+NIS+              A+K  V  +++  A+E    
Sbjct: 120 TVIPAMKD-------AGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL-GT 171

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG-EKWDIAMAALYLTSDTGK 250
             IRVN + PG    TP   +    +      +  P+ ++G E  +IA A + L SDT  
Sbjct: 172 DRIRVNSVHPGMT-YTPMTAETGIRQGEGNYPN-TPMGRVGNEPGEIAGAVVKLLSDTSS 229

Query: 251 YVNGTTLIVDGGLWLSRP 268
           YV G  L VDGG W + P
Sbjct: 230 YVTGAELAVDGG-WTTGP 246

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  179 bits (456), Expect = 5e-56
 Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 10/251 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK A+ITG G+GIG EI+  F   GASV +        +  V  ++ LG +A     D
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +  ++    + +      GK+DILVN  AG       D+    FR   +++    F +  
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVN-NAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ 127

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
                           GGG IL I++      +      A++KAA   + RN+A +   +
Sbjct: 128 LVAPE-------MEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL-GE 179

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
            +IRVNGIAPG I  T  +  +   EI  K   + P+ +LG+  DIA AAL+L S    +
Sbjct: 180 KNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASW 238

Query: 252 VNGTTLIVDGG 262
           V+G  L V GG
Sbjct: 239 VSGQILTVSGG 249

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  178 bits (453), Expect = 8e-56
 Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 16/254 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LK K  LITG   GIG      F K GA +      +  L  A  A     + A     D
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVMD 57

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V      ++       H G+LD +V+ A          +    +  V+ ++  G+F +  
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A + +++             + ++A+  Y  +  Q + AA+ A V  +TR LALE    
Sbjct: 118 AASEAMRE--------KNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALEL-GR 168

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           + IRVN +APG I +T  M    P+++  KA    PL + G+  ++A AAL+L SD   +
Sbjct: 169 WGIRVNTLAPGFI-ETR-MTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSF 226

Query: 252 VNGTTLIVDGGLWL 265
           + G  L VDGG  +
Sbjct: 227 ITGQVLFVDGGRTI 240

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (457), Expect = 8e-56
 Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 18/270 (6%)

Query: 4   ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR---- 59
            S     +L+G+VA++TGG +GIG  I  +  + G++V I  R+ + L +A   L+    
Sbjct: 2   RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 61

Query: 60  -SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV 118
            +   + +  + ++R +E    +V+ST + FGK++ LVN   G FL  AE +S  G+  V
Sbjct: 62  PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 121

Query: 119 MDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVD 178
           ++ +  GTF MC        K   G                        +H  AA+A V 
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP--------TKAGFPLAVHSGAARAGVY 173

Query: 179 AITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL---APDEINSKARDYMPLYKLGEKW 235
            +T++LALEW A   IR+N +APG I  +    +            +   +P  ++G   
Sbjct: 174 NLTKSLALEW-ACSGIRINCVAPGVI-YSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 231

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWL 265
           +++    +L S    ++ G ++ VDGG  L
Sbjct: 232 EVSSVVCFLLSPAASFITGQSVDVDGGRSL 261

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  179 bits (454), Expect = 9e-56
 Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 7/257 (2%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
              K  ++TGG  GIG   +      GA+VA++ R           + +  G+K   ++ 
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   +   K ++      G +  L+  A  + +  A +L+   F  V D++  G F  C
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 126

Query: 131 HEALK-YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               K +L+K   G           I        S  Q+   ++KAA   + + LA EW 
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW- 185

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
           A   IRVN ++PG + +T         +I       +PL +  +  ++   A+ L SD  
Sbjct: 186 ASAGIRVNALSPGYV-NTD-QTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA 243

Query: 250 KYVNGTTLIVDGG--LW 264
            Y+ G    +DGG  +W
Sbjct: 244 TYMTGGEYFIDGGQLIW 260

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  179 bits (455), Expect = 2e-55
 Identities = 86/256 (33%), Positives = 129/256 (50%), Gaps = 9/256 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEG 70
            +GKVA ITGGG+G+G  ++T     GA   I  R+  VL A    + S  G K    + 
Sbjct: 23  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 82

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DVR  +  +  V    +  G  +I++N AAGNF+   E LSPN ++T+ DI   GT  + 
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 142

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            E  K L K         G + L+I+     T S + +  A+AKA V+A++++LA EW  
Sbjct: 143 LEIGKQLIKAQK------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEW-G 195

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
            Y +R N I PGPI      ++L P      +    +P  +LG   ++A  A +L SD  
Sbjct: 196 KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYA 255

Query: 250 KYVNGTTLIVDGGLWL 265
            ++NG  +  DGG  +
Sbjct: 256 SWINGAVIKFDGGEEV 271

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (450), Expect = 2e-55
 Identities = 65/254 (25%), Positives = 100/254 (39%), Gaps = 17/254 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L G+  L+TG G GIG          GA V  + R +  LD+ V               D
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   E      E      G +D+LVN AA   L    +++   F    +++      +  
Sbjct: 61  LGDWE----ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              + L            G+I+N+S+     A        + K A+D +T+ +ALE    
Sbjct: 117 IVARGLIA------RGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALEL-GP 169

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKA-RDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           + IRVN + P  +  T        D   +K   + +PL K  E   +  A L+L SD   
Sbjct: 170 HKIRVNAVNPTVV-MTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG 228

Query: 251 YVNGTTLIVDGGLW 264
              G+TL V+GG W
Sbjct: 229 MTTGSTLPVEGGFW 242

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  177 bits (449), Expect = 4e-55
 Identities = 86/254 (33%), Positives = 124/254 (48%), Gaps = 10/254 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-RSLGIKAVGFEG 70
           L+G+VAL+TGG  G+GF I+    + G SV +  R  +    A   L    G++ + F  
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV   E  KK++E+  E FGKLD +VNAA  N    AE+   + FR V++++  GT+ +C
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA   L++         G        T+           AA+K  V ++T+ LA EW  
Sbjct: 123 REAFSLLRESDNPSIINIGSL------TVEEVTMPNISAYAASKGGVASLTKALAKEW-G 175

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
            Y IRVN IAPG    T     +  D E        +PL + G   D+   A++L S+  
Sbjct: 176 RYGIRVNVIAPGWY-RTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 234

Query: 250 KYVNGTTLIVDGGL 263
           KYV G  + VDGG 
Sbjct: 235 KYVTGQIIFVDGGW 248

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  176 bits (448), Expect = 8e-55
 Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 23/264 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEG 70
           L GKVAL TG G GIG  I+ + G+ GASV +  G   +  +  V+ L+ LG + V  + 
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           D+ +      + +    HFG LD +++ +         +++   F  V ++++ G F + 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            + LK+ ++GG    ++   +++        T        A +KAAV+   R  A++   
Sbjct: 124 QQGLKHCRRGGRIILTSSIAAVM--------TGIPNHALYAGSKAAVEGFCRAFAVDC-G 174

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA------------PDEINSKARDYMPLYKLGEKWDIA 238
              + VN IAPG +  T   ++ +             ++I+    +  PL ++G   DI 
Sbjct: 175 AKGVTVNCIAPGGV-KTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG 233

Query: 239 MAALYLTSDTGKYVNGTTLIVDGG 262
            A   L  +  +++NG  + + GG
Sbjct: 234 RAVSALCQEESEWINGQVIKLTGG 257

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  177 bits (449), Expect = 8e-55
 Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 23/267 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           L+GKVAL+TG G GIG E++ + G+ G  V +         +  V+A++  G  A   + 
Sbjct: 16  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +V   E   ++ E   + FGKLDI+ + +        +D++P  F  V  I++ G F + 
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 135

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA K+L+ GG           L  S T    A       + +K A++   R +A++  A
Sbjct: 136 REAYKHLEIGGRLI--------LMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM-A 186

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINS------------KARDYMPLYKLGEKWDIA 238
           D  I VN +APG I  T   + +  + I +             A  + PL ++G   DIA
Sbjct: 187 DKKITVNVVAPGGI-KTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA 245

Query: 239 MAALYLTSDTGKYVNGTTLIVDGGLWL 265
               +L S+ G +V G  + +DGG  +
Sbjct: 246 RVVCFLASNDGGWVTGKVIGIDGGACM 272

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  175 bits (445), Expect = 2e-54
 Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 13/257 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKG  AL+TGG  GIG+ I  +    GA V    R ++ LD  +   R  G+   G   D
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 72  VRRQEHAKKVVESTFEHF-GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           +  +    K++++    F GKL+ILVN A       A+D +   +  +M  +    + + 
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             A   LK    G        ++ +S+   ++A       +A+K A++ +T++LA EW A
Sbjct: 124 QIAYPLLKASQNGN-------VIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEW-A 175

Query: 191 DYDIRVNGIAPG----PIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS 246
             +IRVN +APG    P+ +T         E         P+ + G+  +++    +L  
Sbjct: 176 KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF 235

Query: 247 DTGKYVNGTTLIVDGGL 263
               Y+ G  +  DGG 
Sbjct: 236 PAASYITGQIIWADGGF 252

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  173 bits (440), Expect = 3e-53
 Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 37/274 (13%)

Query: 5   SPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAI---------MGRRKQVLDAAV 55
           SP +     G+V L+TG G G+G   +  F + GA V +         +G+     D  V
Sbjct: 1   SPLR---FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV 57

Query: 56  SALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGF 115
             +R  G KAV     V   E  +K+V++  + FG++D++VN A      S   +S   +
Sbjct: 58  EEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW 114

Query: 116 RTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKA 175
             +  +   G+F +   A  ++KK          G I+  ++      ++ Q + +AAK 
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKK-------QNYGRIIMTASASGIYGNFGQANYSAAKL 167

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW 235
            +  +   L +E     +I  N IAP     +     + P+           L +  +  
Sbjct: 168 GLLGLANTLVIEG-RKNNIHCNTIAPNAG--SRMTETVMPE----------DLVEALKPE 214

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGGLWLSRPR 269
            +A   L+L  ++    NG    V  G W+ + R
Sbjct: 215 YVAPLVLWLCHESC-EENGGLFEVGAG-WIGKLR 246

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  172 bits (436), Expect = 4e-53
 Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 17/260 (6%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
            +VAL+TG  SGIG EI+ + GK G  V +  R ++ L   +  LR  G++A G   DVR
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
                + +V +  E +G +D+LVN A      +  +L+   +  V++ +  G F +  + 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQV 121

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
           LK       G    G G I+NI++T       +    +A+K  V   T+ L LE  A   
Sbjct: 122 LKA-----GGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTG 175

Query: 194 IRVNGIAPGPIGDTPGMNKL----------APDEINSKARDYMPLYKLGEKWDIAMAALY 243
           I VN + PG + +TP    +          + +E   +    +P+ +  +  ++A    Y
Sbjct: 176 ITVNAVCPGFV-ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 234

Query: 244 LTSDTGKYVNGTTLIVDGGL 263
           L       V    L V GGL
Sbjct: 235 LIGPGAAAVTAQALNVCGGL 254

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  172 bits (438), Expect = 4e-53
 Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 23/268 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA---VGF 68
             GK  +ITG  +GIG   +  F K GA V I GR +  L+     +   G+ A      
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGT 126
             DV        ++ +T   FGK+DILVN A  N     +  D     ++    ++    
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
             M  +  ++L K           ++ +I A     + +   + A AKAA+D  TR  A+
Sbjct: 122 IEMTQKTKEHLIKTKGEIV-----NVSSIVAGPQAHSGY--PYYACAKAALDQYTRCTAI 174

Query: 187 EWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA--------RDYMPLYKLGEKWDIA 238
           +    + +RVN ++PG +  T  M  +   E  S          ++ +P+   G+  +IA
Sbjct: 175 DL-IQHGVRVNSVSPGAV-ATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 232

Query: 239 MAALYLTS-DTGKYVNGTTLIVDGGLWL 265
              ++L   +   Y+ G +++ DGG  L
Sbjct: 233 NIIVFLADRNLSSYIIGQSIVADGGSTL 260

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  171 bits (435), Expect = 8e-53
 Identities = 71/264 (26%), Positives = 112/264 (42%), Gaps = 17/264 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L+ KVA+ITGG  GIG   +  F ++GA V I            + + S  + +     D
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISF-VHCD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAA--AGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           V + E  + +V++T    GKLDI+            S  +     F+ VMDI+  G F +
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW-YQIHVAAAKAAVDAITRNLALEW 188
              A + +            GSI+  ++   +TA         A K AV  +T +L  E 
Sbjct: 123 AKHAARVMIPA-------KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTEL 175

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLGEKWDIAMAALYL 244
             +Y IRVN ++P  +  +P +  +   + +               L    D+A A  YL
Sbjct: 176 -GEYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL 233

Query: 245 TSDTGKYVNGTTLIVDGGLWLSRP 268
             D  KYV+G  L++DGG   + P
Sbjct: 234 AGDESKYVSGLNLVIDGGYTRTNP 257

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  170 bits (432), Expect = 2e-52
 Identities = 82/256 (32%), Positives = 134/256 (52%), Gaps = 10/256 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEG 70
           L+GKV +ITG  +G+G  ++ +F    A V +  R K+   ++ +  ++ +G +A+  +G
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
            EA+KY         +   G+++N+S+          +H AA+K  +  +T  LALE+ A
Sbjct: 125 REAIKY------FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEY-A 177

Query: 191 DYDIRVNGIAPGPIGDTPGM-NKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
              IRVN I PG I +TP    K A  E  +     +P+  +GE  +IA  A +L S   
Sbjct: 178 PKGIRVNNIGPGAI-NTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236

Query: 250 KYVNGTTLIVDGGLWL 265
            YV G TL  DGG+ L
Sbjct: 237 SYVTGITLFADGGMTL 252

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (431), Expect = 2e-52
 Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 25/260 (9%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEG 70
            GKVAL+TG   GIG   +      GA VA++    +      +AL       K +  + 
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 71  DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           DV  Q+  +       +HFG+LDILVN A  N        +   +   + I+ V   +  
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGT 113

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG- 189
           +  L Y+ K   G     GG I+N+S+         Q    A+K  +   TR+ AL    
Sbjct: 114 YLGLDYMSKQNGGE----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANL 169

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-------MPLYKLGEKWDIAMAAL 242
            +  +R+N I PG + +T  +  +  +E   +  +Y       +  Y + +   IA   +
Sbjct: 170 MNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI 228

Query: 243 YLTSDTGKYVNGTTLIVDGG 262
            L  D    +NG  + +   
Sbjct: 229 TLIED--DALNGAIMKITTS 246

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  169 bits (430), Expect = 3e-52
 Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 17/253 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             G  AL+TG G GIG +        GA V  + R    L +                 D
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVD 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +   +      E      G +D+LVN AA   +    +++   F     ++    F +  
Sbjct: 59  LGDWD----ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 114

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              + +            GSI+N+S+ + +      I  ++ K A+  +T+ +A+E    
Sbjct: 115 MVARDMIN------RGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMEL-GP 167

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPD-EINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
           + IRVN + P  +  T    K++ D E   K ++  PL K  E  D+  + L+L SD   
Sbjct: 168 HKIRVNSVNPTVV-LTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 226

Query: 251 YVNGTTLIVDGGL 263
             +G  ++VD G 
Sbjct: 227 STSGGGILVDAGY 239

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  164 bits (416), Expect = 9e-50
 Identities = 64/269 (23%), Positives = 104/269 (38%), Gaps = 29/269 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           LKG+  LITGG SG+G  +  +F   GA VA++ +  + L    +     G   +G  GD
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSP-----NGFRTVMDIDSVGT 126
           VR  E  K+        FGK+D L+  A      +A    P       F  V  I+  G 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 127 FTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLAL 186
                  L  L            G+++   +   +  +       AAK A+  + R LA 
Sbjct: 120 IHAVKACLPALVA--------SRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAF 171

Query: 187 EWGADYDIRVNGIAPGPIGDTP---------GMNKLAPDEINSKARDYMPLYKLGEKWDI 237
           E      +RVNG+  G I ++          G   ++   +    +  +P+ ++ E  + 
Sbjct: 172 ELA--PYVRVNGVGSGGI-NSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEY 228

Query: 238 AMAALYLTS-DTGKYVNGTTLIVDGGLWL 265
             A ++  +        G  L  DGGL +
Sbjct: 229 TGAYVFFATRGDAAPATGALLNYDGGLGV 257

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  163 bits (413), Expect = 9e-50
 Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 18/252 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKVAL++GG  G+G          GA V       +   A  +    L   A     D
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE---LADAARYVHLD 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V +    K  V++    FG L +LVN A    + + ED +   ++ ++D++  G F    
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 120

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             +K +K+ G G        I+NIS+      +       A K AV  +T++ ALE    
Sbjct: 121 AVVKPMKEAGRGS-------IINISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL-GP 172

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             IRVN I PG +  TP M    P++I         L +  E  +++   +YL SD   Y
Sbjct: 173 SGIRVNSIHPGLV-KTP-MTDWVPEDIFQ-----TALGRAAEPVEVSNLVVYLASDESSY 225

Query: 252 VNGTTLIVDGGL 263
             G   +VDGG 
Sbjct: 226 STGAEFVVDGGT 237

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  162 bits (412), Expect = 2e-49
 Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 19/262 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFE 69
              +V LITGGGSG+G   + +    GA ++++    + L+A+ +A+       + +   
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSA-EDLSPNGFRTVMDIDSVGTFT 128
            DV  +   +  V +T E FG++D   N A      +  E  +   F  V+ I+  G F 
Sbjct: 62  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 121

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
              + LK +++        G G ++N ++         Q   AAAK  V  +TRN A+E+
Sbjct: 122 GLEKVLKIMREQ-------GSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEY 174

Query: 189 GADYDIRVNGIAPGPIGDTP-------GMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
              Y IR+N IAPG I  TP        ++   P +   +     P  + GE  +IA   
Sbjct: 175 -GRYGIRINAIAPGAI-WTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 232

Query: 242 LYLTSDTGKYVNGTTLIVDGGL 263
            +L SD   YVN T + +DGG 
Sbjct: 233 AFLLSDDASYVNATVVPIDGGQ 254

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  162 bits (410), Expect = 2e-49
 Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 13/254 (5%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
            +GK+AL+TG   GIG  I+      GA V      +    A       LG    G   +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDY---LGANGKGLMLN 58

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V      + V+E     FG++DILVN A          +    +  +++ +    F +  
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 118

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             ++ + K          G I+ I + +    +  Q + AAAKA +   +++LA E  A 
Sbjct: 119 AVMRAMMK-------KRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREV-AS 170

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             I VN +APG I     M +   D+  +     +P  +LG   +IA A  +L SD   Y
Sbjct: 171 RGITVNVVAPGFI--ETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAY 228

Query: 252 VNGTTLIVDGGLWL 265
           + G TL V+GG+++
Sbjct: 229 ITGETLHVNGGMYM 242

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  161 bits (407), Expect = 6e-49
 Identities = 74/252 (29%), Positives = 114/252 (45%), Gaps = 16/252 (6%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK  L+TG  SGIG      F + GAS+  + R +++L  AV+A   L  +A+    D
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +  + V     E FG+L  + + A       + +L    +  V+ ++  G+F +  
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
           +A + L++GG    +     +            +   H AA K  V  + R LALE  A 
Sbjct: 120 KAGEVLEEGGSLVLTGSVAGLGA----------FGLAHYAAGKLGVVGLARTLALEL-AR 168

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
             +RVN + PG I  TP M    P     +     PL + G   ++A AAL+L S+   Y
Sbjct: 169 KGVRVNVLLPGLI-QTP-MTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAY 226

Query: 252 VNGTTLIVDGGL 263
           + G  L VDGG 
Sbjct: 227 ITGQALYVDGGR 238

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  160 bits (406), Expect = 8e-49
 Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 21/254 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              +  L+TGG  GIG  I+ +    G  VA+  R                    G E D
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVD 53

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V   +   +   +  EH G +++LV+ A  +       ++   F  V++ +  G F +  
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ 113

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A + +++   GR       ++ I +         Q + AA+KA V  + R++A E    
Sbjct: 114 RASRSMQRNKFGR-------MIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS-K 165

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
            ++  N +APG I DT  M +   + I   A  ++P  ++G   ++A    +L S+   Y
Sbjct: 166 ANVTANVVAPGYI-DTD-MTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASY 223

Query: 252 VNGTTLIVDGGLWL 265
           ++G  + VDGG+ +
Sbjct: 224 ISGAVIPVDGGMGM 237

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  160 bits (405), Expect = 2e-48
 Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 25/267 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
             GKV L+TG G  IG   + +  + G ++A++   ++ L+ A +++R  G++A  +  D
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
           V  +E     V+S    FGK+D L N A         +D   + F  V+ I+  G F + 
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
               + +     GR         N ++               +K A+ A+T   AL+  A
Sbjct: 123 KAVSRQMITQNYGRIV-------NTASMAGVKGPPNMAAYGTSKGAIIALTETAALDL-A 174

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA---------------PDEINSKARDYMPLYKLGEKW 235
            Y+IRVN I+PG +     M +                 P  +  +    +P+ + G+  
Sbjct: 175 PYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN 233

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGG 262
           +I     +L  D   ++ G  L + GG
Sbjct: 234 EIPGVVAFLLGDDSSFMTGVNLPIAGG 260

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  159 bits (402), Expect = 3e-48
 Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 24/252 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           ++ K  L+     GIG  ++    + GA V I  R +++L  +                D
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +R      K ++  FE   ++DILV  A G      ++L+   F+  +D   +    +  
Sbjct: 53  LR------KDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             L  +K+ G GR       I+ I++    +         +A+ A+    + L+ E  A 
Sbjct: 107 NYLPAMKEKGWGR-------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEV-AP 158

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           Y I VN +APG   +T  + +L  +E   +    +P+ ++ +  +IA    +L S+   Y
Sbjct: 159 YGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASY 217

Query: 252 VNGTTLIVDGGL 263
           + G T++VDGGL
Sbjct: 218 LTGQTIVVDGGL 229

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  159 bits (402), Expect = 3e-48
 Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 12/251 (4%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVR 73
            V ++TG   GIG  I+   GK G  V +   R  +  +     + + G +A+ F GDV 
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
           ++   + ++++  + +G +D++VN A          +  + +  V+D++  G F     A
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYD 193
            K + K          G I+NI++ +    +  Q + AAAKA V   ++  A E  A  +
Sbjct: 122 TKIMMK-------KRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREG-ASRN 173

Query: 194 IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL-TSDTGKYV 252
           I VN + PG I     M     +++  K    +PL + G+  ++A    +L  S    Y+
Sbjct: 174 INVNVVCPGFI--ASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYI 231

Query: 253 NGTTLIVDGGL 263
            G    +DGG+
Sbjct: 232 TGQAFTIDGGI 242

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  157 bits (397), Expect = 2e-47
 Identities = 49/258 (18%), Positives = 82/258 (31%), Gaps = 19/258 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEG 70
           L  K  +      GIG + S +  K      ++  R +   A       +  +       
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 71  DV-RRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           DV      +KK+++  F+    +DIL+N A          L  +     + I+  G    
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAG--------ILDDHQIERTIAINFTGLVNT 114

Query: 130 CHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWG 189
               L +       R    GG I NI +   + A       +A+KAAV + T +LA    
Sbjct: 115 TTAILDF----WDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA- 169

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
               +    I PG    TP ++              + L    +  +          +  
Sbjct: 170 PITGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE-- 226

Query: 250 KYVNGTTLIVDGGLWLSR 267
              NG    +D G  L  
Sbjct: 227 ANKNGAIWKLDLG-TLEA 243

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (396), Expect = 3e-47
 Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 21/243 (8%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           + G++ LITG G GIG   + +F K  + + +    K  L+   +  + LG K   F  D
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 64

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
              +E      +      G + ILVN A   +                +++ +  F    
Sbjct: 65  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 124

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
             L  + K          G I+ +++   + +  + +   ++K A     + L  E  A 
Sbjct: 125 AFLPAMTKN-------NHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAAL 177

Query: 192 YD--IRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG 249
               ++   + P  + +T  +   +             L    E  ++    ++      
Sbjct: 178 QITGVKTTCLCPNFV-NTGFIKNPST-----------SLGPTLEPEEVVNRLMHGILTEQ 225

Query: 250 KYV 252
           K +
Sbjct: 226 KMI 228

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  156 bits (396), Expect = 4e-47
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 18/262 (6%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           KVAL+TG G GIG  I+ +  K G +VAI         A  S +   G  AV  + DV  
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           ++     VE   +  G  D++VN A        E ++P     V +I+  G       A+
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
           +  KK G G        I+N  +   +  +      +++K AV  +T+  A +  A   I
Sbjct: 122 EAFKKEGHGG------KIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDL-APLGI 174

Query: 195 RVNGIAPGPIGDTPGMNKLAPDEINSKARDY----------MPLYKLGEKWDIAMAALYL 244
            VNG  PG +  TP   ++      +  +            + L +L E  D+A    YL
Sbjct: 175 TVNGYCPGIV-KTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 233

Query: 245 TSDTGKYVNGTTLIVDGGLWLS 266
            S    Y+ G +L++DGG+  +
Sbjct: 234 ASPDSDYMTGQSLLIDGGMVFN 255

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 4e-47
 Identities = 59/258 (22%), Positives = 99/258 (38%), Gaps = 24/258 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GKV ++T    GIG   +  F + GA V      +  L          GI+    +  
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY---PGIQTRVLDVT 60

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
            ++Q               +LD+L N A      +  D     +   M+++    + M  
Sbjct: 61  KKKQIDQF------ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114

Query: 132 EALKYLKKGGPGRSSAGGGSILNI-SATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA 190
             L  +            G+I+N+ S          +   +  KAAV  +T+++A ++  
Sbjct: 115 AFLPKMLAQ-------KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADF-I 166

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLA-----PDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
              IR N + PG + DTP + +       P+E  +         +     +IAM  +YL 
Sbjct: 167 QQGIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA 225

Query: 246 SDTGKYVNGTTLIVDGGL 263
           SD   YV G  +I+DGG 
Sbjct: 226 SDESAYVTGNPVIIDGGW 243

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  156 bits (395), Expect = 6e-47
 Identities = 39/257 (15%), Positives = 91/257 (35%), Gaps = 23/257 (8%)

Query: 17  ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE 76
           A++T      G   + +  + G +VA      +  D                +     ++
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE------AFAETYPQLKPMSEQ 56

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFTMCHEALK 135
              +++E+    +G++D+LV+           +  +   +R  ++   +  F + +    
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 136 YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIR 195
            +KK   G        I+ I++   +          +A+A    +   L+ E   +Y+I 
Sbjct: 117 QMKKRKSGH-------IIFITSATPFGPWKELSTYTSARAGACTLANALSKEL-GEYNIP 168

Query: 196 VNGIAPGPIGDTPGMNKLAPDEINSKARDYM-------PLYKLGEKWDIAMAALYLTSDT 248
           V  I P  +  +       P E      +++        L +LG + ++     +L S +
Sbjct: 169 VFAIGPNYL-HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS 227

Query: 249 GKYVNGTTLIVDGGLWL 265
             Y+ G    + GG  +
Sbjct: 228 CDYLTGQVFWLAGGFPM 244

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  155 bits (392), Expect = 1e-46
 Identities = 71/264 (26%), Positives = 108/264 (40%), Gaps = 19/264 (7%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           L GK ALITG   GIG   +  + + GA VAI     +   A  +    +G  A     D
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE---IGPAACAIALD 59

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V  Q    + V    + +G +DILVN AA   L    +++   +  +  I+  GT  M  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
              + +  GG       GG I+N+++              A KAAV ++T++  L     
Sbjct: 120 AVARAMIAGG------RGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL-IR 172

Query: 192 YDIRVNGIAPGP---------IGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL 242
           + I VN IAPG                   L   E   +    +P  ++G   D+   A+
Sbjct: 173 HGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAI 232

Query: 243 YLTSDTGKYVNGTTLIVDGGLWLS 266
           +L +    Y+   T  VDGG W+S
Sbjct: 233 FLATPEADYIVAQTYNVDGGNWMS 256

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  154 bits (390), Expect = 3e-46
 Identities = 78/270 (28%), Positives = 115/270 (42%), Gaps = 23/270 (8%)

Query: 11  ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA--LRSLGIKAVGF 68
           +LKGKVA++TG  SGIG  I+T     GA + + G         V A      G+K +  
Sbjct: 1   MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
             D+ + E  + +V++     G++DILVN A        ED     +  ++ ++    F 
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
               AL ++KK G GR       I+NI++     AS  +    AAK  V   T+  ALE 
Sbjct: 121 GTAAALPHMKKQGFGR-------IINIASAHGLVASANKSAYVAAKHGVVGFTKVTALET 173

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY-----------MPLYKLGEKWDI 237
            A   I  N I PG +  TP + K           D             P  +      +
Sbjct: 174 -AGQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231

Query: 238 AMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
              A++L SD    + GTT+ VDGG W +R
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGG-WTAR 260

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (372), Expect = 7e-44
 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 21/258 (8%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           + AL+TGG SG+G   +      G  V ++  R++            G   +  EGDV R
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 49

Query: 75  QEHAKKVVESTFEHFGKLDILVNA---AAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           +E  ++ V    E      ++  A    A   L          FR V++++ +GTF +  
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
            A   +++  P       G I+N ++   +     Q   AA+K  V A+T   A E  A 
Sbjct: 110 LAAWAMRENPPDA-EGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAAREL-AG 167

Query: 192 YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY 251
           + IRV  +APG   DTP +  L      S A       +LG   + A   L++  +    
Sbjct: 168 WGIRVVTVAPGLF-DTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PM 224

Query: 252 VNGTTLIVDGGLWLSRPR 269
           +NG  + +DG L ++ PR
Sbjct: 225 LNGEVVRLDGALRMA-PR 241

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  146 bits (370), Expect = 3e-43
 Identities = 48/267 (17%), Positives = 89/267 (33%), Gaps = 26/267 (9%)

Query: 9   ADILKGKVALITGGGSGIGFEISTQFGK---HGASVAIMGRRKQVLDAAVSALRS--LGI 63
           AD L   V ++TG   G G  ++ Q  +    G+ + +  R + +L      L +    +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 64  KAVGFEGDVRRQEHAKKVVESTFE----HFGKLDILVNAAAGNFLVSA---EDLSPNGFR 116
           K V    D+  +   ++++ +  E       +  +L+N AA    VS             
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 117 TVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAA 176
               ++      +    L   +            +++NIS+              A KAA
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLS-----KTVVNISSLCALQPYKGWGLYCAGKAA 175

Query: 177 VDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM----PLYKLG 232
            D + + LA E      +RV   APGP+ D            + + R  +        L 
Sbjct: 176 RDMLYQVLAAEE---PSVRVLSYAPGPL-DNDMQQLARETSKDPELRSKLQKLKSDGALV 231

Query: 233 EKWDIAMAALYLTSDTGKYVNGTTLIV 259
           +    A   L L      + +G  +  
Sbjct: 232 DCGTSAQKLLGLLQK-DTFQSGAHVDF 257

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 5e-43
 Identities = 63/289 (21%), Positives = 112/289 (38%), Gaps = 26/289 (8%)

Query: 3   LESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL- 61
           L   F+ ++L+GK  ++TG   GIG E++    K GA V +  R K+ L   VS    L 
Sbjct: 3   LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62

Query: 62  GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDI 121
              A    G +     A++ V    +  G LD+L+     N  ++      +  R  M++
Sbjct: 63  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 122

Query: 122 DSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAIT 181
           + +    +   AL  LK+          GSI+ +S+     A       +A+K A+D   
Sbjct: 123 NFLSYVVLTVAALPMLKQ--------SNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFF 174

Query: 182 RNLALEWGAD-YDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA 240
            ++  E+     ++ +     G I DT         E   KA   +   +   K + A+ 
Sbjct: 175 SSIRKEYSVSRVNVSITLCVLGLI-DT---------ETAMKAVSGIVHMQAAPKEECALE 224

Query: 241 ALYLTSDTGKYVNGTTLIVDGGLWLSR-PRHLPKDAVKQLSRTVEKRSR 288
            +      G  +    +  D  LW +   R+  +  ++ L  T     R
Sbjct: 225 IIK-----GGALRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDR 268

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  145 bits (367), Expect = 9e-43
 Identities = 68/268 (25%), Positives = 105/268 (39%), Gaps = 21/268 (7%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA--LRSLGIKAVGFEGDVR 73
            A+ITGG   IG  I+ +  + G  V +  R  +     + A    +    AV  +GD+ 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 74  ----RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
                 +  + +++ +F  FG+ D+LVN A+  +                         +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 130 CHEALK---------YLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAI 180
                            ++G  G   +   S++N+   +             AK A+  +
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWDIAM 239
           TR  ALE  A   IRVN +APG     P M    P E   + R  +PL +       IA 
Sbjct: 183 TRAAALEL-APRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIAD 237

Query: 240 AALYLTSDTGKYVNGTTLIVDGGLWLSR 267
           A  +L S    Y+ GTTL VDGGL L+R
Sbjct: 238 AIAFLVSKDAGYITGTTLKVDGGLILAR 265

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  143 bits (361), Expect = 6e-42
 Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 17/260 (6%)

Query: 12  LKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
           L GK AL+ G  +   +GF I+ +  + GA VA+  + +++   A     +LG   +   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVS----AEDLSPNGFRTVMDIDSVG 125
              +  E    +     E FG LD LV+A A     +      D     +   +++ +  
Sbjct: 66  DVTQD-EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124

Query: 126 TFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLA 185
              +   A   L++GG          I+ ++             +A AKAA++A  R LA
Sbjct: 125 LVAVARRAEPLLREGGG---------IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLA 175

Query: 186 LEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT 245
            E      +RVN I+ GP+      +     ++  +     PL +   + ++    L+L 
Sbjct: 176 YEL-GPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL 234

Query: 246 SDTGKYVNGTTLIVDGGLWL 265
           S     + G  + VD G  +
Sbjct: 235 SPLASGITGEVVYVDAGYHI 254

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  142 bits (359), Expect = 8e-42
 Identities = 48/258 (18%), Positives = 89/258 (34%), Gaps = 28/258 (10%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGAS-------VAIMGRRKQVLDAAVSALRSLGIKAVG 67
            + LITG G GIG  I+ +F +           + +  R    L+      R+ G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              D+      +++     E +G +D LVN A      +  DL+   F   M+ +  GTF
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +       +++          G I  I++     A  +      +K     +   + L 
Sbjct: 122 FLTQALFALMERQ-------HSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLY 174

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD 247
                ++R+  + PG +  TP M     DE+ +          +    DIA   +     
Sbjct: 175 A-RKCNVRITDVQPGAV-YTP-MWGKVDDEMQA---------LMMMPEDIAAPVVQAYLQ 222

Query: 248 TGKYVNGTTLI--VDGGL 263
             + V    ++    G +
Sbjct: 223 PSRTVVEEIILRPTSGDI 240

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  131 bits (330), Expect = 2e-37
 Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 18/263 (6%)

Query: 11  ILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF 68
            L GK  L+TG  S   I + I+    + GA +A   +  + L   V    +     +  
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVL 60

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPN-----GFRTVMDIDS 123
           + DV        +     + + K D  V++         +    N     GF+   DI S
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 124 VGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRN 183
                M       L  G          ++L +S      A      +  AKA+++A  R 
Sbjct: 121 YSFVAMAKACRSMLNPGS---------ALLTLSYLGAERAIPNYNVMGLAKASLEANVRY 171

Query: 184 LALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY 243
           +A        +RVN I+ GPI            ++ +      P+ +     D+  +A +
Sbjct: 172 MANAM-GPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF 230

Query: 244 LTSDTGKYVNGTTLIVDGGLWLS 266
           L SD    ++G  + VDGG  ++
Sbjct: 231 LCSDLSAGISGEVVHVDGGFSIA 253

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  128 bits (323), Expect = 1e-36
 Identities = 38/263 (14%), Positives = 70/263 (26%), Gaps = 31/263 (11%)

Query: 13  KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDV 72
           + +  L+ GG   +G      F      VA +   +    +A           V      
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS--------VIVKMTDSF 52

Query: 73  RRQEHAKKVVESTFEHFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
             Q               K+D ++  A G     +           +       +    H
Sbjct: 53  TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGA- 190
            A K+LK+         GG +    A      +   I    AK AV  + ++LA +    
Sbjct: 113 LATKHLKE---------GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGM 163

Query: 191 DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK 250
                   + P  + DTP   K  P+                    +        +   +
Sbjct: 164 PSGAAAIAVLPVTL-DTPMNRKSMPEA---------DFSSWTPLEFLVETFHDWITGNKR 213

Query: 251 YVNGTTL--IVDGGLWLSRPRHL 271
             +G+ +  +   G     P + 
Sbjct: 214 PNSGSLIQVVTTDGKTELTPAYF 236

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 2e-36
 Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 10/252 (3%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL---RSLGIKAVGF 68
           +KG VA+ITGG SG+G   + +    GAS  ++       +A    L          V  
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           E DV+      K      +       +  A+    L   +  +   F+ V+D++ +GTF 
Sbjct: 63  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           +       + +  P +     G I+N ++   +     Q   +A+K  +  +T  +A + 
Sbjct: 123 VIRLVAGEMGQNEPDQGG-QRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWDIAMAALYLTSD 247
            A   IRV  IAPG  G    +    P+++ +     +P    LG+  + A     +  +
Sbjct: 182 -APIGIRVMTIAPGLFGTP--LLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 238

Query: 248 TGKYVNGTTLIV 259
              ++NG  + +
Sbjct: 239 --PFLNGEVIRL 248

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 7e-35
 Identities = 51/278 (18%), Positives = 84/278 (30%), Gaps = 55/278 (19%)

Query: 15  KVALITGGGSGIGFEISTQFGK-HGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
            VAL+TGG  GIG  I     +     V +  R      AAV  L++ G+     + D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 74  RQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEA 133
             +  + + +   + +G LD+LVN A   F V+            M  +  GT  +C E 
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 134 LKYLKKGGPGRSSAGGGSILNISATLHYTAS----------------------------- 164
           L  +K  G   + +   S+  + +                                    
Sbjct: 124 LPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ 183

Query: 165 ---WYQIHVAAAKAAVDAITRNLALEWGADY---DIRVNGIAPGPIGDTPGMNKLAPDEI 218
              W        K  V  ++R  A +         I +N   PG +  T      A    
Sbjct: 184 KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV-RTDMAGPKATKSP 242

Query: 219 NSKARDYMPLYKLGEKWDIAMAALYL--TSDTGKYVNG 254
                            + A   +YL       +  +G
Sbjct: 243 ----------------EEGAETPVYLALLPPDAEGPHG 264

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  122 bits (307), Expect = 9e-34
 Identities = 62/286 (21%), Positives = 106/286 (37%), Gaps = 40/286 (13%)

Query: 16  VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL----------------- 58
           VAL+TG    +G  I+      G +V +   R      A+SA                  
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 59  --RSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFR 116
              +  +        V       ++V + + H+G+ D+LVN A+  +         +G  
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 117 T--------------VMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT 162
                          +   +++  + +          G P +      SI+N+   +   
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHR-VAGTPAKHRGTNYSIINMVDAMTNQ 182

Query: 163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA 222
                     AK A++ +TR+ ALE  A   IRVNG+ PG       M    P  +    
Sbjct: 183 PLLGYTIYTMAKGALEGLTRSAALEL-APLQIRVNGVGPGLSVLVDDM----PPAVWEGH 237

Query: 223 RDYMPLYK-LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR 267
           R  +PLY+      +++   ++L S   KY+ GT + VDGG  L+R
Sbjct: 238 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR 283

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  119 bits (298), Expect = 1e-32
 Identities = 59/255 (23%), Positives = 95/255 (37%), Gaps = 9/255 (3%)

Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF 68
            LKGK  LI G      I + I+      GA++A     +  L+  V  +         +
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVY 60

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           E DV ++EH K +  S  +  G LD +V++ A     + E       ++  +     +  
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
              E                G S+L +S         +   +  AKAA+++  R LA++ 
Sbjct: 121 SLIELTNT-----LKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDL 175

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT 248
              + IRVN ++ GPI             I        PL K     ++  A +YL S  
Sbjct: 176 -GKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSL 234

Query: 249 GKYVNGTTLIVDGGL 263
              V+G    VD G 
Sbjct: 235 SSGVSGEVHFVDAGY 249

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  111 bits (277), Expect = 8e-30
 Identities = 47/254 (18%), Positives = 83/254 (32%), Gaps = 35/254 (13%)

Query: 14  GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR 73
           GKV ++ GG   +G  I   F K+G +V  +         +           +  +G+  
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS----------NILVDGNKN 51

Query: 74  RQEHAKKVVESTFE--HFGKLDILVNAAAGN-FLVSAEDLSPNGFRTVMDIDSVGTFTMC 130
             E  + ++E T       ++D +   A G     ++          ++      +    
Sbjct: 52  WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111

Query: 131 HEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW-G 189
             A  +LK          GG +    A      +   I    AKAAV  +T +LA +  G
Sbjct: 112 KLATTHLKP---------GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSG 162

Query: 190 ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL-YLTSDT 248
              +  V  I P  + DTP   K  P+                    I+   L + T  +
Sbjct: 163 LPDNSAVLTIMPVTL-DTPMNRKWMPNA---------DHSSWTPLSFISEHLLKWTTETS 212

Query: 249 GKYVNGTTLIVDGG 262
            +  +G  L +   
Sbjct: 213 SRPSSGALLKITTE 226

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  110 bits (276), Expect = 2e-29
 Identities = 38/231 (16%), Positives = 74/231 (32%), Gaps = 21/231 (9%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIM--GRRKQVLDAAVSALRSLGIKAVGFE 69
           +     ++TG   GIG  +  Q  K      I+   R  +      S       +     
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLP 57

Query: 70  GDVRRQEHAKKVVESTFEHFGK--LDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGT 126
             V   +     V    E  G   L +L+N A       +  + +       +D+++   
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 127 FTMCHEALKYLKKGGPGRSSAG-----------GGSILNISATLHYTASWYQIHVAAAKA 175
             +  + L  LK      S                 + +I+     +A +  +    +KA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 176 AVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM 226
           A++   R LA++   D ++ V    PG +  T    K A   +     + +
Sbjct: 178 AINMFGRTLAVDL-KDDNVLVVNFCPGWV-QTNLGGKNAALTVEQSTAELI 226

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  110 bits (274), Expect = 3e-29
 Identities = 46/272 (16%), Positives = 83/272 (30%), Gaps = 48/272 (17%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
            + +I+G  +GIG          G  +  +  R   + A +S                  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLST----------------A 45

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
           +   + + +   +    +D LV  A                  V+ ++  G   +    L
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKV-------LGNVVSVNYFGATELMDAFL 98

Query: 135 KYLKKGGPGRS--------------------SAGGGSILNISATL-HYTASWYQIHVAAA 173
             LKKG    +                    +   G      A + H       +  A +
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE--INSKARDYMPLYKL 231
           K A+    R  A  WG                +TP +     D     S A+   P+ + 
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGAT--ETPLLQAGLQDPRYGESIAKFVPPMGRR 216

Query: 232 GEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
            E  ++A    +L S    YV+G  +++DGG+
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 4e-26
 Identities = 48/236 (20%), Positives = 85/236 (36%), Gaps = 17/236 (7%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGR------RKQVLDAAVSALRSLGIKAVGF 68
            V LITG  SGIG  ++ +     +    +         +  L  A  AL          
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           + DVR  +      E   E     D+LV  A    L   E L  +   +V+D++ VGT  
Sbjct: 63  QLDVRDSKSVAAARERVTEGRV--DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEW 188
           M    L  +K+        G G +L   +        +     A+K A++ +  +LA+  
Sbjct: 121 MLQAFLPDMKR-------RGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

Query: 189 GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL 244
              + + ++ I  GP+  T  M K+         R  +  +    ++      ++ 
Sbjct: 174 -LPFGVHLSLIECGPV-HTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR 227

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 94.8 bits (234), Expect = 3e-23
 Identities = 60/286 (20%), Positives = 99/286 (34%), Gaps = 40/286 (13%)

Query: 12  LKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKA---- 65
           L+GK A I G     G G+ ++      GA + +      +     S  R    ++    
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 66  ----------------------------VGFEGDVRRQEHAKKVVESTFEHFGKLDILVN 97
                                                    ++  E   + FG +DILV+
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 98  AAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA 157
           + A    VS   L  +    +  I +     +   +            + GG SI     
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL------PIMNPGGASISLTYI 179

Query: 158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE 217
                   Y   +++AKAA+++ TR LA E G   +IRVN I+ GP+G          D 
Sbjct: 180 ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDT 239

Query: 218 INSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL 263
           +   + +  P+ K     ++  AA +L S     + G T+ VD GL
Sbjct: 240 MIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 92.5 bits (228), Expect = 1e-22
 Identities = 49/267 (18%), Positives = 87/267 (32%), Gaps = 22/267 (8%)

Query: 11  ILKGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA-LRSLGIKAVG 67
           +L GK  L++G    S I F I+    + GA + + G  +  L   ++  L +       
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 68  FEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTF 127
              +          V        KLD +V++                        +  + 
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGF-----MPQTGMGINPFFDAPYADVSK 117

Query: 128 TMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALE 187
            +   A  Y             G  +         A      +  AK+A++++ R +A E
Sbjct: 118 GIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVARE 177

Query: 188 WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK------------LGEKW 235
            G  Y +R N +A GPI  T  M+ +    +  +A   + L +            + +  
Sbjct: 178 AG-KYGVRSNLVAAGPI-RTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT 235

Query: 236 DIAMAALYLTSDTGKYVNGTTLIVDGG 262
            +A     L SD      G  +  DGG
Sbjct: 236 PVAKTVCALLSDWLPATTGDIIYADGG 262

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 89.8 bits (221), Expect = 9e-22
 Identities = 42/262 (16%), Positives = 75/262 (28%), Gaps = 34/262 (12%)

Query: 15  KVALITGGGSGIGFEISTQF---GKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
              LITG   G+G  +        +    +    R ++     +  L          E D
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEID 61

Query: 72  VRRQEHAKKVVESTF--EHFGKLDILV-NAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
           +R  +   K+V           L++L  NA           +        +  ++V    
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-------QIHVAAAKAAVDAIT 181
           +    L  LKK      S   G        +                    +K+A++A T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA 241
           ++L+++      I    + PG +  T      AP ++ +                I    
Sbjct: 182 KSLSVDL-YPQRIMCVSLHPGWV-KTDMGGSSAPLDVPTSTG------------QIVQTI 227

Query: 242 LYLTS-DTGKYVNGTTLIVDGG 262
             L     G +VN      DG 
Sbjct: 228 SKLGEKQNGGFVN-----YDGT 244

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 83.8 bits (205), Expect = 4e-19
 Identities = 55/327 (16%), Positives = 95/327 (29%), Gaps = 83/327 (25%)

Query: 14  GKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVL-------------DAAVSAL 58
             +  I G G   G G+ I+ +  K    +                       D  +   
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 59  RSLGIK-------------------AVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAA 99
           + + I                          ++ +    + V     + +GK+++LV++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 100 AGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATL 159
           A    V  + L  N  R         +        KY       +SS    +       +
Sbjct: 122 ANAKEVQKDLL--NTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVV 179

Query: 160 HYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPI--------------- 204
                       +AKAA+++ TR LA   G +Y+IR+N I+ GP+               
Sbjct: 180 PGYGGGMS----SAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTY 235

Query: 205 ----------------------------GDTPGMNKLAPDEINSKARDYMPLYKLGEKWD 236
                                         +   N    D     +  Y PL +     D
Sbjct: 236 ENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTD 295

Query: 237 IAMAALYLTSDTGKYVNGTTLIVDGGL 263
           I   A +L S   + + G T+ VD GL
Sbjct: 296 IGSVASFLLSRESRAITGQTIYVDNGL 322

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 68.5 bits (166), Expect = 5e-14
 Identities = 31/227 (13%), Positives = 62/227 (27%), Gaps = 23/227 (10%)

Query: 4   ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLG 62
           +  +K         L+TGG  G+G +I+    + GA  + ++ R     D A   +  L 
Sbjct: 3   DDEWKPT----GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE 58

Query: 63  IKAVGFEGDVRRQEHAKKVVESTF--EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMD 120
                           + V E          L  + +AAA     + + L+         
Sbjct: 59  ALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASR 118

Query: 121 IDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAI 180
              +G   +     +               + +  S+      +      A   A +D +
Sbjct: 119 AKVLGARNLHELTRE-----------LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL 167

Query: 181 TRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMP 227
            +    +      +    +A G    +        D         MP
Sbjct: 168 AQQRRSDG-----LPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMP 209

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 67.4 bits (163), Expect = 6e-14
 Identities = 23/201 (11%), Positives = 57/201 (28%), Gaps = 9/201 (4%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR 74
           +VAL+ G G  +G  ++ +    G  + +  RR++  +A  +  R +   A         
Sbjct: 2   RVALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 75  QEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL 134
              A  +   T      +D   +                  R           +      
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 135 KYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDI 194
           + L+              L+      +     +          D  ++ + +   ++   
Sbjct: 121 EVLESEKVVS-------ALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISE-ID 172

Query: 195 RVNGIAPGPIGDTPGMNKLAP 215
            +  +  GP+ ++  +  L P
Sbjct: 173 GLRPLDAGPLSNSRLVESLTP 193

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 64.9 bits (157), Expect = 3e-13
 Identities = 26/180 (14%), Positives = 48/180 (26%), Gaps = 19/180 (10%)

Query: 12  LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGD 71
           +KGK A++  G   +G   +      GA V + GR+     AA  ++             
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK--------RFK 72

Query: 72  VRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCH 131
           V           S  E       +  A A       E L    ++    I+ V  +    
Sbjct: 73  VNVTAAETADDASRAEAVKGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQP 128

Query: 132 EALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGAD 191
                           GG                  + +   +A +  +  +    + A+
Sbjct: 129 PLGIGGIDATDKGKEYGGKRAFGALGI-------GGLKLKLHRACIAKLFESSEGVFDAE 181

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 1e-04
 Identities = 32/231 (13%), Positives = 57/231 (24%), Gaps = 26/231 (11%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRR-----KQVLDAAVSALRSLGIKAVGF- 68
            VALITG     G  ++    + G  V  + RR        ++      ++     +   
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 69  EGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFT 128
            GD+       K++                       S   +S +      D+D VGT  
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIY---------NLGAQSHVKISFDLAEYTADVDGVGTLR 112

Query: 129 MCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-------ASWYQIHVAAAKAAVDAIT 181
           +                 A    +      +           S Y     AAK     I 
Sbjct: 113 LLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY----GAAKLYAYWIV 168

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG 232
            N    +       +      P      + +     +       +  + LG
Sbjct: 169 VNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 219

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (92), Expect = 3e-04
 Identities = 47/231 (20%), Positives = 79/231 (34%), Gaps = 27/231 (11%)

Query: 15  KVALITGGGSGIGFEISTQFGKHGASVAIMGRR-----KQVLDAAVSALRSLGIKAVGFE 69
           KVALITG     G  ++    + G  V  + RR      + +D       +   K     
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 70  GDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTM 129
           GD+    +  +++        + D + N  A    +S   +S        D+D++GT  +
Sbjct: 62  GDLSDTSNLTRILREV-----QPDEVYNLGA----MSHVAVSFESPEYTADVDAMGTLRL 112

Query: 130 CHEALKYLKKGGPGR----SSA---GGGSILNIS-ATLHYTASWYQIHVAAAKAAVDAIT 181
             EA+++L      R    S++   G    +     T  Y  S Y    A AK     IT
Sbjct: 113 L-EAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY----AVAKLYAYWIT 167

Query: 182 RNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG 232
            N    +G      +      P      + +     I + A+       LG
Sbjct: 168 VNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG 218

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 10/123 (8%)

Query: 18  LITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGF-EGDVRRQE 76
           L+TGG   IG     Q  ++G  V I+        + +  +  LG K   F EGD+R + 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 77  HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY 136
              ++      H   +D +++ A     + A   S        D +  GT  +       
Sbjct: 64  LMTEI-----LHDHAIDTVIHFAG----LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA 114

Query: 137 LKK 139
             K
Sbjct: 115 NVK 117

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 1/68 (1%)

Query: 10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFE 69
             +GK   +TG     G  +S      GA+V         + +     R          
Sbjct: 4  SFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVAD-GMQSEI 62

Query: 70 GDVRRQEH 77
          GD+R Q  
Sbjct: 63 GDIRDQNK 70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	299
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.98
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.84
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.72
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.72
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.71
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.69
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.67
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.66
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.66
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.65
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.64
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.64
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.62
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.62
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.6
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.59
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.58
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.57
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.56
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.5
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.2
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.19
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.18
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.16
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.09
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.09
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.94
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.9
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.17
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.05
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.04
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.98
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.86
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.85
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.85
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.82
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.74
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.7
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.7
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.69
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.64
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.59
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.58
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.51
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.48
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.46
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.43
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.36
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.3
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.29
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.29
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.27
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.21
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.12
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.02
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.02
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.01
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.96
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.95
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.94
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.94
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.94
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.93
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.93
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.93
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.92
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.91
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.91
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.9
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.9
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.88
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.87
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.85
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.84
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.84
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.83
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.81
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.69
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.68
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.67
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.66
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.63
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.59
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.58
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.56
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.51
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.49
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.45
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.41
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.37
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.35
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.34
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.29
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.25
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.18
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.0
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.0
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.93
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.58
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.44
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.4
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.29
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.22
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.18
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.1
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.1
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.03
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.97
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.92
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.89
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.87
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.84
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.78
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.69
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	94.69
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.67
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.6
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.6
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.6
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	94.59
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.51
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	94.42
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.33
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.22
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.16
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.11
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.09
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.06
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.04
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.0
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.92
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.75
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.74
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	93.66
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.62
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.57
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.55
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.52
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	93.52
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	93.43
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.4
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.36
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.35
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.27
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.24
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.22
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.2
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.11
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.08
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.89
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.75
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.53
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.46
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.42
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.41
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.2
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.17
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	92.03
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	91.9
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.82
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.82
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.58
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.18
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.13
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.09
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.96
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.67
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.64
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	90.6
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.58
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	90.57
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	90.43
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.39
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.29
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.76
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	89.6
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.41
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	89.25
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	89.06
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.01
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	88.88
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.88
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.8
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.78
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.77
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	88.61
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.47
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	88.45
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.44
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.26
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.0
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	87.94
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	87.81
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.74
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	87.61
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.53
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	87.49
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	87.42
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.42
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	87.19
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.07
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.99
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	86.72
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	86.41
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	86.25
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	86.22
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.06
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	85.87
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	85.85
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	85.58
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	85.58
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	85.51
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	85.18
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.11
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.95
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.92
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.91
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.29
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.2
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	84.06
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.98
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	83.91
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	83.89
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.75
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	83.41
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.26
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	82.93
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	82.88
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.79
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	82.68
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	82.6
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	82.5
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	82.36
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	82.33
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.26
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	82.25
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	81.9
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	81.83
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	81.23
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	81.21
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.18
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	81.04
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	80.99
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	80.62
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	80.49
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	80.49
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	80.19
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	80.14
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	80.05

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.4e-57  Score=384.21  Aligned_cols=245  Identities=29%  Similarity=0.432  Sum_probs=230.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++.+|++++++++++++++.+++
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|++++       .|+||++||..+..+.++..+
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~G~IVnisS~~~~~~~~~~~~  158 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-------YGRIINISSIVGLTGNVGQAN  158 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-------CEEEEEECCTHHHHCCTTCHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-------CeEEEEECCHHhcCCCCCCHH
Confidence            9999999999998889999999999999999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+++|+.||+ ++|||||+|+||+++|++.. .. .++..+......|++|+.+|+|+|++++||+|+.+
T Consensus       159 Y~asKaal~~ltr~lA~el~-~~gIrVN~V~PG~v~T~~~~-~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s  235 (251)
T d2c07a1         159 YSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTD-KI-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCEeccccc-cc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 89999999999999876543 33 46677888889999999999999999999999999


Q ss_pred             CCccCcEEEeCCccc
Q 022335          250 KYVNGTTLIVDGGLW  264 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~  264 (299)
                      .|+|||+|.+|||++
T Consensus       236 ~~itG~~i~vDGG~s  250 (251)
T d2c07a1         236 GYINGRVFVIDGGLS  250 (251)
T ss_dssp             TTCCSCEEEESTTSC
T ss_pred             CCCcCcEEEECCCcC
Confidence            999999999999986

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.9e-57  Score=384.34  Aligned_cols=248  Identities=35%  Similarity=0.520  Sum_probs=229.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999999999998888854 4778999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-cccCCCc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-YTASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~  167 (299)
                      +|++|+||||||+....++.+.+.++|++++++|+.++++++|+++|+|++++       .|+||+++|..+ ..+.++.
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~G~Ii~i~S~~~~~~~~~~~  153 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-------NPSIINIGSLTVEEVTMPNI  153 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-------SCEEEEECCGGGTCCCSSSC
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-------cccccccccchhccccCccc
Confidence            99999999999998889999999999999999999999999999999999877       799999999776 4577889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      .+|++||+|+.+|+++|+.|++ ++|||||+|+||+++|++.......++..+...+..|++|+.+|+|+|++++||+|+
T Consensus       154 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~  232 (251)
T d1vl8a_         154 SAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE  232 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred             cchHHHHHhHHHHHHHHHHHhc-ccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999998 899999999999998776554445566777888899999999999999999999999


Q ss_pred             CCCCccCcEEEeCCcccc
Q 022335          248 TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       248 ~~~~~~G~~i~~dgg~~~  265 (299)
                      .++|+|||+|.+|||++.
T Consensus       233 ~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         233 EAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhCCCcCcEEEeCcCeeC
Confidence            999999999999999974

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=4.2e-57  Score=386.71  Aligned_cols=250  Identities=32%  Similarity=0.507  Sum_probs=232.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +|+||++|||||++|||+++|++|+++|++|++++|+. +.++.+.+++++.+.++.++++|++++++++++++++.+++
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999985 56888999999888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.      +++||++||..+..+.+++.+
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~------g~~Iv~isS~~~~~~~~~~~~  157 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI------KGTVINMSSVHEKIPWPLFVH  157 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC------CCEEEEECCGGGTSCCTTCHH
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc------cccccccccchhcccCccccc
Confidence            99999999999988899999999999999999999999999999999998762      356999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+++|+.||+ ++|||||+|+||+++|++.......++..+......|++|+.+|+|+|++++||+|+.+
T Consensus       158 Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s  236 (261)
T d1geea_         158 YAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             cccCCccchhhHHHHHHHhh-hhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 89999999999999877654444456667778889999999999999999999999999


Q ss_pred             CCccCcEEEeCCccccCC
Q 022335          250 KYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~~  267 (299)
                      .++|||+|.+|||+++..
T Consensus       237 ~~itG~~i~vDGG~sl~p  254 (261)
T d1geea_         237 SYVTGITLFADGGMTLYP  254 (261)
T ss_dssp             TTCCSCEEEESTTGGGCG
T ss_pred             cCCcCCeEEECCCeeCCC
Confidence            999999999999999853

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-56  Score=381.66  Aligned_cols=246  Identities=33%  Similarity=0.490  Sum_probs=230.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++.+++||++++++++++++++.+++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++ +.+.++|++++++|+.++++++++++|+|++++       +++||++||..+..+.+++.+
T Consensus        87 g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~g~Ii~isS~~~~~~~~~~~~  158 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-------GGVILTITSMAAENKNINMTS  158 (255)
T ss_dssp             SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTCCCTTCHH
T ss_pred             CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-------ccccccccccchhcccccccc
Confidence            999999999998877666 789999999999999999999999999999987       789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|++++|.|++ ++|||||+|+||+++|++... ...++..+...+..|++|+.+|+|+|++++||+|+.+
T Consensus       159 Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~-~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s  236 (255)
T d1fmca_         159 YASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHT-TCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             chhHHHHHHHHHHHHHHHhC-ccCeEEEEeeeCcCcChHhhc-cCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 899999999999998665443 3355667778889999999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      .|+|||+|.+|||+..
T Consensus       237 ~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         237 SWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             TTCCSCEEEESTTSCC
T ss_pred             cCCcCCEEEECcCccc
Confidence            9999999999999753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-56  Score=380.55  Aligned_cols=242  Identities=27%  Similarity=0.375  Sum_probs=225.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.   .+...+.+|++++++++++++++.+++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            5889999999999999999999999999999999999999999888773   4688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||.....++.+.+.++|++++++|+.++++++|+++|+|++++       +|+||++||..+..+.++..+|
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~G~II~isS~~~~~~~~~~~~Y  150 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-------HGRIITIGSVVGTMGNGGQANY  150 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHHCCTTCHHH
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-------CCEeeeecchhhcCCCCCCHHH
Confidence            999999999999889999999999999999999999999999999999987       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|+.+|+++++.||+ ++|||||+|+||+++|++.. .. .++..+......|++|+.+|+|+|++++||+|+.+.
T Consensus       151 ~asKaal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~-~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  227 (243)
T d1q7ba_         151 AAAKAGLIGFSKSLAREVA-SRGITVNVVAPGFIETDMTR-AL-SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA  227 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-TS-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhC-ccCeEEEEEecceEechhhh-hh-hhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            9999999999999999998 89999999999999866432 23 344556777889999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      |+|||+|.+|||+++
T Consensus       228 ~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         228 YITGETLHVNGGMYM  242 (243)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CCcCCeEEECCCeEe
Confidence            999999999999986

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.7e-57  Score=384.83  Aligned_cols=252  Identities=27%  Similarity=0.401  Sum_probs=202.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++...+.++.++.||++++++++++++++.++|
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999999888899999999999999999999999998


Q ss_pred             -CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 -GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                       |++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+..+.++..
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-------~G~Iv~isS~~~~~~~~~~~  156 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-------CGNIIFMSSIAGVVSASVGS  156 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-------SCEEEEEC----------CC
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-------cccccccccccccccccccc
Confidence             7899999999999889999999999999999999999999999999999987       79999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      +|++||+|+.+|+++++.|++ ++|||||+|+||+++|++. .....++..+......|++|+.+|+|+|++++||+|+.
T Consensus       157 ~Y~asKaal~~lt~~lA~e~~-~~gIrVN~V~PG~i~T~~~-~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  234 (259)
T d1xq1a_         157 IYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLA-EAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA  234 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGG
T ss_pred             cccccccchhhhhHHHHHHhc-ccCeEEEEeccCcccCHHh-hhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999998 8999999999999986644 34445566677778899999999999999999999999


Q ss_pred             CCCccCcEEEeCCccccCCCCC
Q 022335          249 GKYVNGTTLIVDGGLWLSRPRH  270 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~~~~~  270 (299)
                      ++|+|||+|.+|||+++....+
T Consensus       235 s~~iTG~~i~vDGG~s~~g~~~  256 (259)
T d1xq1a_         235 ASYITGQTICVDGGLTVNGFSY  256 (259)
T ss_dssp             GTTCCSCEEECCCCEEETTEEE
T ss_pred             hcCCcCcEEEeCCCEECCCCCC
Confidence            9999999999999998864433

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.8e-56  Score=381.48  Aligned_cols=249  Identities=31%  Similarity=0.455  Sum_probs=231.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++.+|++++++++++++++.+++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999999999999999888899999999999999999999999998


Q ss_pred             C-CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 G-KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      + ++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+++.       +|+||++||..+..+.++..
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~G~Ii~isS~~~~~~~~~~~  156 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-------RGNVVFISSVSGALAVPYEA  156 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-------SEEEEEECCGGGTSCCTTCH
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-------cccccccccccccccccccc
Confidence            6 799999999998889999999999999999999999999999999999987       79999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---hHHhHHHHhcCCCCCCCCHHHHHHHHHHHc
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---DEINSKARDYMPLYKLGEKWDIAMAALYLT  245 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  245 (299)
                      .|++||+|+.+|+|+++.||+ ++|||||+|+||+|+|++.......   ++..+......|++|+.+|+|+|++++||+
T Consensus       157 ~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~  235 (259)
T d2ae2a_         157 VYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC  235 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhC-cCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999998 8999999999999987654322222   344466678899999999999999999999


Q ss_pred             CCCCCCccCcEEEeCCccccC
Q 022335          246 SDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       246 s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+.++|+|||+|.+|||++..
T Consensus       236 S~~s~~itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         236 FPAASYVTGQIIYVDGGLMAN  256 (259)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CchhCCCcCcEEEECCCeEee
Confidence            999999999999999999864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=3.1e-56  Score=378.60  Aligned_cols=245  Identities=29%  Similarity=0.408  Sum_probs=213.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++.+  ...+++++.+.++.++.||++++++++++++++.++||
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998753  34455667788999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+..+.++..+|
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~G~Iv~isS~~~~~~~~~~~~Y  152 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-------WGRIINLTSTTYWLKIEAYTHY  152 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGGSCCSSCHHH
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-------CCCccccccchhcccCcccccc
Confidence            999999999999889999999999999999999999999999999999987       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|+.+|+++|+.|++ ++|||||+|+||+++|++.......+..........|++|+.+|+|+|++++||+|+.+.
T Consensus       153 ~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~  231 (247)
T d2ew8a1         153 ISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDAS  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGT
T ss_pred             hhhhccHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhc
Confidence            9999999999999999998 999999999999998776544443333333334456889999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      |+|||+|.+|||++.
T Consensus       232 ~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         232 FITGQTLAVDGGMVR  246 (247)
T ss_dssp             TCCSCEEEESSSCCC
T ss_pred             CCcCCeEEECCCEec
Confidence            999999999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=6e-56  Score=380.02  Aligned_cols=247  Identities=28%  Similarity=0.395  Sum_probs=220.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++... +.++.++++|++++++++++++++.++
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999997 56778888887554 678999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      ||++|+||||||+....++.+.+.++|+++|++|+.++++++++++|+|++++       .|+||++||..+..+.+++.
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-------~G~Iv~isS~~~~~~~~~~~  153 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-------FGRIINIASAHGLVASANKS  153 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTCH
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-------CceEeecccccceeccCCcc
Confidence            99999999999999889999999999999999999999999999999999987       79999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC----------chHHhHHHHhcCCCCCCCCHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA----------PDEINSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dva  238 (299)
                      +|++||+|+.+|+++++.|++ ++|||||+|+||+++|++......          .+...+......|++|+.+|+|+|
T Consensus       154 ~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA  232 (260)
T d1x1ta1         154 AYVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG  232 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHH
T ss_pred             hhhhhhhhHHHhHHHHHHHhc-hhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHH
Confidence            999999999999999999997 899999999999998775433221          122234456778999999999999


Q ss_pred             HHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          239 MAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       239 ~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ++++||+|+.+.|+|||+|.+|||++.
T Consensus       233 ~~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         233 GTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhChhhCCCcCCEEEECcchhc
Confidence            999999999999999999999999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=8.6e-56  Score=378.81  Aligned_cols=244  Identities=25%  Similarity=0.441  Sum_probs=228.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.+.++.++.||++++++++++++++.++||
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            58899999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|.++.       .|+||++||..+..+.+++.+
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-------~G~II~isS~~~~~~~~~~~~  154 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-------YGRIVNTASMAGVKGPPNMAA  154 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHHSCCTTBHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-------CCCCCeeechhhccCCcchHH
Confidence            99999999998754 7899999999999999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC--------------CCCCCchHHhHHHHhcCCCCCCCCHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG--------------MNKLAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      |++||+|+.+|+++|+.||+ ++|||||+|+||+|+|++.              .....++...+.+....|++|+.+|+
T Consensus       155 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  233 (260)
T d1zema1         155 YGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN  233 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGG
T ss_pred             HHHHHHHHHHHHHHHHHHhh-hhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHH
Confidence            99999999999999999998 8999999999999987642              11223456667788899999999999


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      |+|++++||+|+.+.|+|||+|.+|||
T Consensus       234 dvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         234 EIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             GSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            999999999999999999999999998

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.1e-55  Score=377.44  Aligned_cols=247  Identities=30%  Similarity=0.416  Sum_probs=227.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.+.  +.++.+++||++++++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999998888765  457899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           89 FGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      ||++|+||||||+... .++.+.+.++|++++++|+.++++++|+++|+|+++.       +|+||++||..+..+.++.
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-------~G~Ii~isS~~~~~~~~~~  153 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-------SGMVVNTASVGGIRGIGNQ  153 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCGGGTSBCSSB
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-------CCCCcccccHhhccCCCCc
Confidence            9999999999998654 6788999999999999999999999999999999887       7999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC------CCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN------KLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+|++||+|+.+|+++|+.|++ ++|||||+|+||+++|++...      ....++..+.+....|++|+.+|+|+|+++
T Consensus       154 ~~Y~asKaal~~lt~~lA~el~-~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v  232 (258)
T d1iy8a_         154 SGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV  232 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhC-ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999999998 899999999999998764321      112345666778889999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+|+.++++|||+|.+|||++.
T Consensus       233 ~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         233 AFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhCchhcCCcCceEEcCcchhc
Confidence            999999999999999999999975

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=6.3e-56  Score=379.29  Aligned_cols=244  Identities=28%  Similarity=0.393  Sum_probs=228.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++++|++++++++++++++.++||++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            38999999999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH--HHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY--LKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      |+||||||+....++.+.+.++|++++++|+.++++++++++|+  |.++.       .|+||+++|..+..+.++..+|
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-------~g~Ii~i~S~~~~~~~~~~~~Y  153 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-------TGRIVNIASTGGKQGVVHAAPY  153 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-------EEEEEEECCGGGTSCCTTCHHH
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-------CcccccccccccccccccchhH
Confidence            99999999988899999999999999999999999999999996  56655       6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC---------CCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM---------NKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ++||+|+.+|+++|+.||+ ++|||||+|+||+++|++..         .....++..+.+....|++|+.+|+|+|+++
T Consensus       154 ~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v  232 (257)
T d2rhca1         154 SASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMV  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999997 89999999999999876432         1234567778888999999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      +||+|+.+.++|||+|.+|||++
T Consensus       233 ~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         233 AYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCchhcCCcCceEEECcCcc
Confidence            99999999999999999999974

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.4e-55  Score=376.71  Aligned_cols=246  Identities=29%  Similarity=0.422  Sum_probs=225.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++   +.++.+++||++++++++++++++.+++|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999999888887766   56799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++..      +|+||++||..+..+.++..+|
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~------~g~Iv~isS~~~~~~~~~~~~Y  152 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR------GGKIINMASQAGRRGEALVGVY  152 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCGGGTSCCTTCHHH
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc------CCccccccchhhccccccccch
Confidence            9999999999988899999999999999999999999999999998766532      6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC---------CCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM---------NKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      ++||+|+.+|+++++.||+ ++|||||+|+||+++|++..         .....++..+.+....|++|+.+|+|+|+++
T Consensus       153 ~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v  231 (256)
T d1k2wa_         153 CATKAAVISLTQSAGLNLI-RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA  231 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHhc-ccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            9999999999999999998 89999999999999876431         1223445566778889999999999999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCccccC
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +||+|+.+.|+|||+|.+|||.++.
T Consensus       232 ~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         232 IFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             HHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHhCchhCCccCceEEECcchhhC
Confidence            9999999999999999999999873

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.6e-55  Score=369.52  Aligned_cols=240  Identities=29%  Similarity=0.372  Sum_probs=221.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++   +.++.++++|++++++++++++++.+++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999999888887776   3468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++++++|.|+++.       +|+||++||..+..+.++..+
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~G~Ii~isS~~~~~~~~~~~~  151 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-------RGSIINISSIEGLAGTVACHG  151 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTBHH
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-------cceEEeccccccccccccccc
Confidence            9999999999999889999999999999999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+|+++.||+ ++|||||+|+||+++|++. .....+      ....|++|+.+|+|+|++++||+|+.+
T Consensus       152 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~-~~~~~~------~~~~pl~R~~~p~diA~~v~fL~s~~s  223 (244)
T d1nffa_         152 YTATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMT-DWVPED------IFQTALGRAAEPVEVSNLVVYLASDES  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGG-TTSCTT------CSCCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred             hhhHHHHHHHHHHHHHHHhc-ccCEEEEEEeeCCccChhH-hhhhHH------HHhccccCCCCHHHHHHHHHHHhChhh
Confidence            99999999999999999998 8999999999999986643 332221      245789999999999999999999999


Q ss_pred             CCccCcEEEeCCccccCC
Q 022335          250 KYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~~~  267 (299)
                      +++|||+|.+|||+....
T Consensus       224 ~~itG~~i~vDGG~~ag~  241 (244)
T d1nffa_         224 SYSTGAEFVVDGGTVAGL  241 (244)
T ss_dssp             TTCCSCEEEESTTGGGSC
T ss_pred             CCCcCCEEEECCCeeccc
Confidence            999999999999998754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.4e-55  Score=372.28  Aligned_cols=241  Identities=26%  Similarity=0.429  Sum_probs=225.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIM-GRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++|||||++|||+++|++|+++|++|++. .|+++.++++.++++..+.++.++++|++++++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999986 5677889999999998888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       +|+||++||..+..+.++..+|++|
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~G~IVnisS~~~~~~~~~~~~Y~as  154 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-------KGRIINIASVVGLIGNIGQANYAAA  154 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-------CcEEEEEcChhhcCCCCCCHHHHHH
Confidence            999999999889999999999999999999999999999999999987       7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc-CCCCCCc
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT-SDTGKYV  252 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~  252 (299)
                      |+|+.+|+++|+.||+ ++|||||+|+||+++|++. ..+ .++..+......|++|+.+|+|+|+++.||+ |+.+.|+
T Consensus       155 Kaal~~ltk~lA~el~-~~gIrvN~I~PG~i~T~~~-~~~-~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~i  231 (244)
T d1edoa_         155 KAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMT-AKL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYI  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHH-HTT-CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGC
T ss_pred             HHHHHHChHHHHHHHh-hhCcEEEEEecceeccHHH-HHh-hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCC
Confidence            9999999999999998 9999999999999986543 333 4566677888899999999999999999996 8999999


Q ss_pred             cCcEEEeCCcccc
Q 022335          253 NGTTLIVDGGLWL  265 (299)
Q Consensus       253 ~G~~i~~dgg~~~  265 (299)
                      |||+|.+|||+++
T Consensus       232 tG~~i~vdGG~si  244 (244)
T d1edoa_         232 TGQAFTIDGGIAI  244 (244)
T ss_dssp             CSCEEEESTTTTC
T ss_pred             cCCeEEeCCCeeC
Confidence            9999999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=4.6e-55  Score=372.24  Aligned_cols=246  Identities=32%  Similarity=0.462  Sum_probs=225.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.. +.++.++.+|++++++++++++++.++||
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            48999999999999999999999999999999999999999999888843 56899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++.      +++||++||..+..+.++..+|
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~------gg~Ii~isS~~~~~~~~~~~~Y  155 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL------GASIINMSSIEGFVGDPSLGAY  155 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS------CEEEEEECCGGGTSCCTTCHHH
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC------CCceEeeeccceeccCCCchhH
Confidence            9999999999998899999999999999999999999999999999998762      3699999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH--hcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          171 AAAKAAVDAITRNLALE--WGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e--~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      ++||+|+.+|+++++.|  ++ ++|||||+|+||+++|++. .....++.........|++|+.+|+|+|++++||+|+.
T Consensus       156 ~asKaal~~lt~~lA~e~~l~-~~gIrVN~I~PG~i~T~~~-~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  233 (251)
T d1zk4a1         156 NASKGAVRIMSKSAALDCALK-DYDVRVNTVHPGYIKTPLV-DDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEECCBCCHHH-HTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhcchHHHHHHHhcC-CCcEEEEEEeCCCCCChhH-HhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999998  54 8899999999999986543 33444455555667789999999999999999999999


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                      +.|+|||+|.+|||++.
T Consensus       234 s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         234 SKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hCCCcCcEEEECccccc
Confidence            99999999999999874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=5.5e-55  Score=372.90  Aligned_cols=245  Identities=28%  Similarity=0.368  Sum_probs=225.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .|++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+.++.+++||++++++++++++++.++||++|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            37889999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHH
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAA  173 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~s  173 (299)
                      +||||||+....++.+.+.++|++++++|+.++++++++++|+|.+++.      .++||++||..+..+.+++..|++|
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~------~g~Iv~isS~~~~~~~~~~~~Y~as  154 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH------GGKIINACSQAGHVGNPELAVYSSS  154 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS------CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc------ccccccccchhhcccCcccccchhC
Confidence            9999999988899999999999999999999999999999999887652      5889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---------CCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          174 KAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---------KLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       174 Kaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      |+|+.+|+++|+.||+ ++|||||+|+||+++|++...         ....+...+.+.+..|++|+.+|+|+|++++||
T Consensus       155 Kaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL  233 (255)
T d1gega_         155 KFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL  233 (255)
T ss_dssp             HHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHhhHHHHHHHhh-hhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999998 899999999999998754211         122334456677889999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|+.+.|+|||+|.+|||+.+
T Consensus       234 ~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         234 ASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HSGGGTTCCSCEEEESSSSSC
T ss_pred             hCchhCCccCcEEEecCCEEe
Confidence            999999999999999999865

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.1e-55  Score=368.31  Aligned_cols=240  Identities=31%  Similarity=0.419  Sum_probs=219.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++     +.+++.||++++++++++++++.+++|
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999999998888776654     467899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++|+++|.|+++.       .+.|+++|| .+..+.++..+|
T Consensus        77 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~~~i~~~ss-~~~~~~~~~~~Y  148 (242)
T d1ulsa_          77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-------PGSIVLTAS-RVYLGNLGQANY  148 (242)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------CEEEEEECC-GGGGCCTTCHHH
T ss_pred             CceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-------cceeeeecc-ccccCCCCCcch
Confidence            999999999999889999999999999999999999999999999999876       677777776 467788899999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|+.+|+++|+.||+ ++|||||+|+||+++|++. ... ++...+......|++|+.+|+|+|++++||+|+.+.
T Consensus       149 ~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~-~~~-~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~  225 (242)
T d1ulsa_         149 AASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMT-AKV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESS  225 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTT-SSS-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCcccChhh-hcC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhC
Confidence            9999999999999999998 8999999999999987643 333 566677888899999999999999999999999999


Q ss_pred             CccCcEEEeCCccccC
Q 022335          251 YVNGTTLIVDGGLWLS  266 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~~  266 (299)
                      |+|||+|.+|||+++.
T Consensus       226 ~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         226 FITGQVLFVDGGRTIG  241 (242)
T ss_dssp             TCCSCEEEESTTTTTT
T ss_pred             CCCCcEEEECCCccCC
Confidence            9999999999999873

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.6e-55  Score=369.94  Aligned_cols=242  Identities=30%  Similarity=0.456  Sum_probs=217.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+ ..+++     ...+++||++++++++++++++.++||
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            588999999999999999999999999999999999986543 33333     246789999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+..+.++.+.+.++|++++++|+.++++++++++|+|++++       .|+||+++|..+..+.++..+|
T Consensus        76 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-------~G~Ii~isS~~~~~~~~~~~~Y  148 (248)
T d2d1ya1          76 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-------GGAIVNVASVQGLFAEQENAAY  148 (248)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-------CEEEEEECCGGGTSBCTTBHHH
T ss_pred             CCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-------cccccccccccccccccccchh
Confidence            999999999999889999999999999999999999999999999999987       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC----CCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN----KLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      ++||+|+.+|+++++.||+ ++|||||+|+||+++|++...    ...+++..+...+..|++|+.+|+|+|++++||+|
T Consensus       149 ~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S  227 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS  227 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999998 899999999999998764322    12244556677888999999999999999999999


Q ss_pred             CCCCCccCcEEEeCCccccC
Q 022335          247 DTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       247 ~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +.++|+|||+|.+|||++..
T Consensus       228 ~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         228 EKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             GGGTTCCSCEEEESTTGGGB
T ss_pred             chhcCCCCcEEEcCcCcccc
Confidence            99999999999999999753

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.1e-55  Score=374.23  Aligned_cols=242  Identities=32%  Similarity=0.366  Sum_probs=220.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.++++|++++++++++++++.++||
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999999998887776655   56799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+..+.++..+|
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-------~G~II~isS~~~~~~~~~~~~Y  151 (254)
T d1hdca_          79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-------GGSIVNISSAAGLMGLALTSSY  151 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTCHHH
T ss_pred             CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-------CCeecccccchhcccccchhhH
Confidence            999999999999889999999999999999999999999999999999987       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCC-CHHHHHHHHHHHcCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLG-EKWDIAMAALYLTSDTG  249 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~  249 (299)
                      ++||+|+.+|+++|+.||+ ++|||||+|+||+++|++.... .. +..+......|++|+. +|+|+|++++||+|+.+
T Consensus       152 ~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~v~T~~~~~~-~~-~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a  228 (254)
T d1hdca_         152 GASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAET-GI-RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHH-TC-CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhC-CCceEEEEeeeCcccCccchhc-CH-HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhh
Confidence            9999999999999999998 8999999999999987643211 11 1223344567889986 69999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      +|+|||+|.+|||++.
T Consensus       229 ~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         229 SYVTGAELAVDGGWTT  244 (254)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             CCCCCceEEeCCCccC
Confidence            9999999999999987

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.2e-54  Score=366.38  Aligned_cols=235  Identities=24%  Similarity=0.385  Sum_probs=208.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +.|+||++|||||++|||+++|++|+++|++|++++|+.+.           ..++..+++|++++++++++++++.+++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-----------PKGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-----------CTTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-----------hcCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            45889999999999999999999999999999999998743           3357889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+..+.++..+
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~g~Iv~isS~~~~~~~~~~~~  144 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-------FGRMIFIGSVSGLWGIGNQAN  144 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCCCC-----CCHH
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-------CCceEEEcchhhccCCcccHH
Confidence            9999999999999889999999999999999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |++||+|+.+|+++++.|++ ++|||||+|+||+++|++.. .. ++...+......|++|+.+|||+|+++.||+|+.+
T Consensus       145 Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~-~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s  221 (237)
T d1uzma1         145 YAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTR-AL-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDA  221 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHH-HS-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhh-cCCceeeeeeeCcCCChhhh-cc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999998 89999999999999866432 22 45666778888999999999999999999999999


Q ss_pred             CCccCcEEEeCCcccc
Q 022335          250 KYVNGTTLIVDGGLWL  265 (299)
Q Consensus       250 ~~~~G~~i~~dgg~~~  265 (299)
                      +|+|||+|.+|||+++
T Consensus       222 ~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         222 SYISGAVIPVDGGMGM  237 (237)
T ss_dssp             TTCCSCEEEESTTTTC
T ss_pred             cCCcCCeEEECCCCCC
Confidence            9999999999999865

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1e-53  Score=367.67  Aligned_cols=250  Identities=28%  Similarity=0.355  Sum_probs=222.1

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. ...+.++.||++++++++++++++.++|
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999999999999999998854 3468889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCC--CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCC-
Q 022335           90 GKLDILVNAAAGNFLV--SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWY-  166 (299)
Q Consensus        90 g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-  166 (299)
                      |++|+||||||+....  .+.+.+.++|++++++|+.++++++|+++|+|.++.       .|+||+++|..+..+.++ 
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-------~g~ii~iss~~~~~~~~~~  153 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-------KGSIVFTASISSFTAGEGV  153 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-------CEEEEEECCGGGTCCCTTS
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-------CCCcccccccccccccccc
Confidence            9999999999986554  578889999999999999999999999999999887       799999999999887655 


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-hHHhHH--HHhcCCCCCCCCHHHHHHHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-DEINSK--ARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      ...|++||+|+.+|+++++.||+ ++|||||+|+||+++|++....... .+..+.  .....|.+|+.+|||+|++++|
T Consensus       154 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~f  232 (268)
T d2bgka1         154 SHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY  232 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHH
T ss_pred             ccccchhHHHHHhCHHHHHHHhC-hhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHH
Confidence            46899999999999999999998 8999999999999988765544332 222222  2234578899999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccCCC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~~~  268 (299)
                      |+|+.+.|+|||+|.+|||++...|
T Consensus       233 L~S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         233 LAGDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             HhChhhCCccCceEEECcCcccCCC
Confidence            9999999999999999999999876

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.2e-53  Score=364.66  Aligned_cols=249  Identities=27%  Similarity=0.409  Sum_probs=229.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+++++.||++++++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999999999999999988999999999999999999999999999


Q ss_pred             -CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 -GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                       +.+|+||||||+....++.+.+.++|++++++|+.++++++++++|.|.++.       .|+||++||..+..+.++..
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-------~g~ii~isS~~~~~~~~~~~  154 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-------NGNVIFLSSIAGFSALPSVS  154 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------SEEEEEECCGGGTSCCTTCH
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-------ccccccccccccccccccch
Confidence             6899999999999889999999999999999999999999999999999988       89999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----CchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----APDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      .|+++|+|+.+|++.++.||+ ++|||||+|+||+++|++....+    ...+..+......|++|+.+|+|+|++++||
T Consensus       155 ~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL  233 (258)
T d1ae1a_         155 LYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFL  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcC-cCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999998 89999999999999887644332    2456667778889999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +|+.+.++||++|.+|||++..
T Consensus       234 ~S~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         234 CFPAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGC
T ss_pred             hChhhCCCcCcEEEeCCCeecc
Confidence            9999999999999999999874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-54  Score=367.98  Aligned_cols=243  Identities=33%  Similarity=0.486  Sum_probs=218.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++    .++.++.||++++++++++++++.++|
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            3688999999999999999999999999999999999998888776655    358899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           90 GKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      |++|+||||||+... .++.+.+.++|++++++|+.++++++++++|+|+++        +|+||++||..+..+.++..
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--------~G~Ii~isS~~~~~~~~~~~  149 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--------QGNVINISSLVGAIGQAQAV  149 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCHHHHHCCTTCH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--------CCCCcccccccccccccCcc
Confidence            999999999997654 667889999999999999999999999999999875        48999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC---CCC-CchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM---NKL-APDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +|++||+|+.+|+++|+.|++ ++|||||+|+||+|+|++..   ... ..+...+......|++|+.+|+|+|++++||
T Consensus       150 ~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL  228 (250)
T d1ydea1         150 PYVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             hhHHHHhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999998 89999999999999876432   111 2334556666778999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccC
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      +|+ +.|+|||+|.+|||+++.
T Consensus       229 ~Sd-a~~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         229 ASE-ANFCTGIELLVTGGAELG  249 (250)
T ss_dssp             HHH-CTTCCSCEEEESTTTTSC
T ss_pred             hCc-cCCCcCCeEEECCCcccC
Confidence            997 789999999999999873

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-54  Score=372.69  Aligned_cols=269  Identities=30%  Similarity=0.509  Sum_probs=238.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-----GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...     +.++.++.||+++++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999753     46899999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +.+.+|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++       .++||++|+ .+..+.
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-------~g~Ii~~ss-~~~~~~  159 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-------GGSIVNIIV-PTKAGF  159 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-------CEEEEEECC-CCTTCC
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-------ccccccccc-cccccc
Confidence            999999999999999998889999999999999999999999999999999999987       788998866 456778


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC--chHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA--PDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      ++...|++||+|+.+|++++|.||+ ++|||||+|+||+|+|++......  .++..+......|++|+.+|+|+|++++
T Consensus       160 ~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~  238 (297)
T d1yxma1         160 PLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVC  238 (297)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHhc-ccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            8999999999999999999999998 899999999999998776543332  3455566777889999999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccCCCCC------------CchhHHHHHhHhhhhcc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLSRPRH------------LPKDAVKQLSRTVEKRS  287 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~~~~~------------~~~~~~~~~~~~~~~~~  287 (299)
                      ||+|+.+.|+|||+|.+|||+++....+            .+....+++++.++++.
T Consensus       239 fL~Sd~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (297)
T d1yxma1         239 FLLSPAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKEKA  295 (297)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHHHH
T ss_pred             HHhCchhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHHhc
Confidence            9999999999999999999999853222            12344677777777654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5e-54  Score=363.73  Aligned_cols=240  Identities=25%  Similarity=0.339  Sum_probs=218.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.    .+..+.+|+++++++++++    +++|
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~----~~~g   73 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKAL----GGIG   73 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHH----TTCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHH----HHcC
Confidence            5789999999999999999999999999999999999988887776653    4788999999999987665    4679


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++..      +|+||+++|..+..+.++..+|
T Consensus        74 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~------~g~ii~isS~~~~~~~~~~~~Y  147 (242)
T d1cyda_          74 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV------PGSIVNVSSMVAHVTFPNLITY  147 (242)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTSCCTTBHHH
T ss_pred             CCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc------cCcccccchhhccccCCccccc
Confidence            9999999999988899999999999999999999999999999998766531      6899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+|+.+|+++|+.|++ ++|||||+|+||+++|++.......++..+......|++|+.+|||+|++++||+|+.+.
T Consensus       148 ~asKaal~~lt~~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~  226 (242)
T d1cyda_         148 SSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA  226 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cchHHHHHHHHHHHHHHhC-ccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999998 999999999999998765544455677778888899999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      |+|||+|.+|||++.
T Consensus       227 ~itG~~i~vDGG~~a  241 (242)
T d1cyda_         227 STSGGGILVDAGYLA  241 (242)
T ss_dssp             TCCSSEEEESTTGGG
T ss_pred             CcCCceEEeCcchhc
Confidence            999999999999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-53  Score=362.28  Aligned_cols=240  Identities=27%  Similarity=0.379  Sum_probs=219.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.    .+..+.+|+++++++++++    +++|
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~----~~~g   75 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERAL----GSVG   75 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHH----TTCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHH----HHhC
Confidence            4889999999999999999999999999999999999998888776653    4788999999999987765    4679


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.++..      .|+||++||..+..+.++..+|
T Consensus        76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~------~g~Ii~isS~~~~~~~~~~~~Y  149 (244)
T d1pr9a_          76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV------PGAIVNVSSQCSQRAVTNHSVY  149 (244)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTSCCTTBHHH
T ss_pred             CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC------cceEeecccccccccccchhhh
Confidence            9999999999998899999999999999999999999999999997655421      6999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      ++||+|+.+|+++++.||+ ++|||||+|+||+++|++........+..+...+..|++|+.+|+|+|++++||+|+.++
T Consensus       150 ~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~  228 (244)
T d1pr9a_         150 CSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hhhHHHHHHHHHHHHHHhC-CCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            9999999999999999998 899999999999998876655556667777888899999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      |+|||+|.+|||++.
T Consensus       229 ~itG~~i~vDGG~~A  243 (244)
T d1pr9a_         229 MTTGSTLPVEGGFWA  243 (244)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CcCCcEEEECccHhh
Confidence            999999999999975

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=6.6e-54  Score=365.35  Aligned_cols=244  Identities=28%  Similarity=0.354  Sum_probs=219.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++   +.+..++++|++++++++++++++.+++
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            3589999999999999999999999999999999999999988887776   5578899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|+++        +|+||++||..+..+.++..+
T Consensus        79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--------~G~Iv~isS~~~~~~~~~~~~  150 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--------GGSIINMASVSSWLPIEQYAG  150 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSCCTTBHH
T ss_pred             CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--------CCceecccchhhhcCcccccc
Confidence            999999999999988999999999999999999999999999999999754        599999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEeCCccCCCCCCCCCC---chHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGAD--YDIRVNGIAPGPIGDTPGMNKLA---PDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~--~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      |++||+|+.+|+++++.|++ +  +|||||+|+||+++|++.....+   .++.........|++|+.+|+|+|++++||
T Consensus       151 Y~asKaal~~lt~~lA~e~~-~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         151 YSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHh-hcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHH
Confidence            99999999999999999997 5  56999999999998765432222   233333334456788999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|+.+.|+|||+|.+|||+..
T Consensus       230 ~S~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         230 ASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             HSGGGTTCCSCEEEESSSCTT
T ss_pred             hChhhCCCcCcEEEECccHhh
Confidence            999999999999999999753

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.3e-53  Score=366.14  Aligned_cols=250  Identities=25%  Similarity=0.372  Sum_probs=218.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++.+.+   .++.++.||++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999998764   469999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCC----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           87 EHFGKLDILVNAAAGNFLVSA----EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      ++||++|+||||||+....++    .+.+.++|++++++|+.++++++++++|+|+++.       ++.|+++||..+..
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-------g~iI~~~Ss~a~~~  153 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-------GEIVNVSSIVAGPQ  153 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEECCGGGSSS
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-------Cccccccchhcccc
Confidence            999999999999998776555    3567788999999999999999999999999875       34444445567789


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH-------HhHHHHhcCCCCCCCCHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE-------INSKARDYMPLYKLGEKW  235 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~  235 (299)
                      +.++...|++||+|+.+|+++|+.||+ ++|||||+|+||+|+|++.......+.       .........|++|+.+|+
T Consensus       154 ~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe  232 (272)
T d1xkqa_         154 AQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE  232 (272)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             CCCCcchhhhHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHH
Confidence            999999999999999999999999998 899999999999998775443333322       223345668999999999


Q ss_pred             HHHHHHHHHcCCC-CCCccCcEEEeCCccccCC
Q 022335          236 DIAMAALYLTSDT-GKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       236 dva~~~~~l~s~~-~~~~~G~~i~~dgg~~~~~  267 (299)
                      |+|++++||+|+. +.|+|||+|.+|||+++..
T Consensus       233 diA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~  265 (272)
T d1xkqa_         233 HIANIILFLADRNLSFYILGQSIVADGGTSLVM  265 (272)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCB
T ss_pred             HHHHHHHHHhCcchhCCccCeEEEeCcCHHHhc
Confidence            9999999999965 6799999999999999853

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.5e-53  Score=363.53  Aligned_cols=246  Identities=30%  Similarity=0.423  Sum_probs=210.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5889999999999999999999999999999999999999999999998764   3699999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc-cccc
Q 022335           88 HFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT-LHYT  162 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~-~~~~  162 (299)
                      +||++|+||||||+..+    ..+.+.+.++|++++++|+.++++++++++|+|+++.        |.+|+++|. .+..
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--------g~iI~~~S~~~~~~  153 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--------GEIVNISSIASGLH  153 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEECCTTSSSS
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--------Ccceeeeeeccccc
Confidence            99999999999997643    3456678899999999999999999999999998875        556666555 5678


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-------hHHhHHHHhcCCCCCCCCHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-------DEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  235 (299)
                      +.++..+|++||+|+.+|+++|+.||+ ++|||||+|+||+|+|++......+       ........+..|++|+.+|+
T Consensus       154 ~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe  232 (264)
T d1spxa_         154 ATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQ  232 (264)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHH
T ss_pred             cCCCchhhhhhhhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHH
Confidence            999999999999999999999999998 8999999999999987754332211       23344566789999999999


Q ss_pred             HHHHHHHHHcCC-CCCCccCcEEEeCCcccc
Q 022335          236 DIAMAALYLTSD-TGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       236 dva~~~~~l~s~-~~~~~~G~~i~~dgg~~~  265 (299)
                      |+|++++||+|+ .++|+|||+|.+|||+++
T Consensus       233 dvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         233 DIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            999999999995 589999999999999986

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.2e-53  Score=364.13  Aligned_cols=249  Identities=26%  Similarity=0.363  Sum_probs=221.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998764   3689999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCC--CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           88 HFGKLDILVNAAAGNFLV--SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      +||++|++|||||.....  ...+.+.++|++++++|+.++++++++++|.|+++.       +++|+++||..+..+.+
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-------~g~ii~~ss~~~~~~~~  153 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-------GEIVNVSSIVAGPQAHS  153 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEECCGGGSSSCCT
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-------cccccchhhhhccccCC
Confidence            999999999999976543  345568899999999999999999999999999876       78999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH-------HhHHHHhcCCCCCCCCHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE-------INSKARDYMPLYKLGEKWDIA  238 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva  238 (299)
                      ++.+|++||+|+.+|+++++.||+ ++|||||+|+||+|+|++.......+.       .........|++|+.+|+|+|
T Consensus       154 ~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA  232 (274)
T d1xhla_         154 GYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA  232 (274)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHH
T ss_pred             CCceehhhhhHHHHHHHHHHHHHh-HhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHH
Confidence            999999999999999999999998 899999999999998764333222221       122234567999999999999


Q ss_pred             HHHHHHcCC-CCCCccCcEEEeCCccccCC
Q 022335          239 MAALYLTSD-TGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       239 ~~~~~l~s~-~~~~~~G~~i~~dgg~~~~~  267 (299)
                      ++++||+|+ .++|+|||+|.+|||+++..
T Consensus       233 ~~v~fL~S~d~s~~itG~~i~vDGG~~l~~  262 (274)
T d1xhla_         233 NIIVFLADRNLSSYIIGQSIVADGGSTLVM  262 (274)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHcCCccccCccCcEEEeCcCHHHhc
Confidence            999999995 68999999999999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=6.8e-53  Score=361.00  Aligned_cols=247  Identities=24%  Similarity=0.426  Sum_probs=223.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.||++++++++++++++.+++
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            68899999999999999999999999999999999999999888888754 47789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-------  162 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-------  162 (299)
                      |++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|.++..      .+.|++++|.....       
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~------~g~i~~~~s~~~~~~~~~~~~  159 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ------KGSIVVTSSMSSQIINQSSLN  159 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC------CEEEEEECCGGGTSCCEEETT
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc------ceEEEEeeccccccccccccc
Confidence            99999999999988899999999999999999999999999999999876542      67888888876543       


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +.++...|++||+|+.+|+++++.||+ ++|||||+|+||+++|++. ... .++..+......|++|+.+|+|+|++++
T Consensus       160 ~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~-~~~-~~~~~~~~~~~~pl~R~g~pedvA~~v~  236 (260)
T d1h5qa_         160 GSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQT-AHM-DKKIRDHQASNIPLNRFAQPEEMTGQAI  236 (260)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGG-GGS-CHHHHHHHHHTCTTSSCBCGGGGHHHHH
T ss_pred             cCccccchhhhhhhHHHHHHHHHHHhc-hhCeEEeecCCCcccCcch-hcc-CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            345778999999999999999999998 8999999999999986643 333 4566677888999999999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ||+|+.+.|+|||+|.+|||+.++
T Consensus       237 fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             HHhcchhCCCcCceEEECCCeecC
Confidence            999999999999999999999864

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.5e-51  Score=355.40  Aligned_cols=243  Identities=26%  Similarity=0.379  Sum_probs=213.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.++.+|++++++++++++++.+++|
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999999998887766654   45799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCC-----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           91 KLDILVNAAAGNFLVS-----AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      ++|++|||||+.....     ..+.+.++|+++|++|+.++++++++++|.|+++        +|+||+++|..+..+.+
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--------~g~iI~i~S~~~~~~~~  150 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--------RGNVIFTISNAGFYPNG  150 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEECCGGGTSTTS
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--------CCCceeeeechhccCCC
Confidence            9999999999765432     2444556799999999999999999999999886        48899999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC--------CCchHHhHHHHhcCCCCCCCCHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK--------LAPDEINSKARDYMPLYKLGEKWDI  237 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dv  237 (299)
                      +..+|++||+|+.+|+++||.||+ ++ ||||+|+||+|+|++....        ...++..+......|++|+.+|+|+
T Consensus       151 ~~~~Y~asKaal~~ltr~lA~ela-~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peev  228 (276)
T d1bdba_         151 GGPLYTAAKHAIVGLVRELAFELA-PY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEY  228 (276)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhh-cc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHH
Confidence            999999999999999999999997 74 9999999999987653221        1233455677788999999999999


Q ss_pred             HHHHHHHcCC-CCCCccCcEEEeCCccccC
Q 022335          238 AMAALYLTSD-TGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       238 a~~~~~l~s~-~~~~~~G~~i~~dgg~~~~  266 (299)
                      |++++||+|+ .+.|+|||+|.+|||+++.
T Consensus       229 a~~v~fL~S~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         229 TGAYVFFATRGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             SHHHHHHHCHHHHTTCSSCEEEESSSGGGC
T ss_pred             HHHHHHHcCCcccCCeeCcEEEECcChhhc
Confidence            9999999985 6899999999999999983

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.2e-52  Score=355.09  Aligned_cols=239  Identities=16%  Similarity=0.231  Sum_probs=216.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++......      +..+|++++++++++++++.++||++|+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            799999999999999999999999999999998887776554432      24689999999999999999999999999


Q ss_pred             EEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHHHHH
Q 022335           96 VNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVAAAK  174 (299)
Q Consensus        96 v~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sK  174 (299)
                      |||||+... .++.+.+.++|++.+++|+.++++++++++|+|++++       .|+||++||..+..+.++..+|++||
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-------~G~IV~isS~~~~~~~~~~~~Y~asK  148 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-------SGHIIFITSATPFGPWKELSTYTSAR  148 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CCEEEEECCSTTTSCCTTCHHHHHHH
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-------cceeeccccccccccccccccccccc
Confidence            999998654 7889999999999999999999999999999999987       79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC------CchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          175 AAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL------APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       175 aal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      +|+.+|+|+|+.||+ ++|||||+|+||+++|++.....      ..++..+...+..|++|+++|+|+|++++||+|+.
T Consensus       149 aal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~  227 (252)
T d1zmta1         149 AGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS  227 (252)
T ss_dssp             HHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred             ccHHHHHHHHHHHhc-ccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999998 99999999999999876544332      23456677788899999999999999999999999


Q ss_pred             CCCccCcEEEeCCccccCCC
Q 022335          249 GKYVNGTTLIVDGGLWLSRP  268 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~~~  268 (299)
                      +.|+|||+|.+|||+++..+
T Consensus       228 s~~iTG~~i~vdGG~~~~~~  247 (252)
T d1zmta1         228 CDYLTGQVFWLAGGFPMIER  247 (252)
T ss_dssp             CGGGTTCEEEESTTCCCCCC
T ss_pred             hcCCcCCeEEECCCceeCCC
Confidence            99999999999999998554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.7e-52  Score=355.24  Aligned_cols=246  Identities=25%  Similarity=0.301  Sum_probs=215.1

Q ss_pred             CCCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        10 ~~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .+|+||++|||||+|  |||+++|++|+++|++|++++|+++..+.. +++.....+..++++|++++++++++++++.+
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            468999999999987  999999999999999999999987654444 44445556788899999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           88 HFGKLDILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      ++|++|+||||||+...    .++.+.+.++|+..+++|+.+++.+++++.|+|++         +|+||++||..+..+
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---------~G~Iv~isS~~~~~~  153 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---------GGGIVTLTYYASEKV  153 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---------EEEEEEEECGGGTSB
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---------CCEEEEEeehHhcCC
Confidence            99999999999997642    35677889999999999999999999999998864         589999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .+++.+|++||+|+.+|++++|.||+ ++|||||+|+||+++|++.......++..+......|++|+.+|+|+|++++|
T Consensus       154 ~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~f  232 (256)
T d1ulua_         154 VPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLF  232 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc-ccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999998 89999999999999877665555567777888899999999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      |+|+.+.|+|||+|.+|||+++.
T Consensus       233 L~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         233 LLSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HhCchhCCccCCeEEECcCEeCc
Confidence            99999999999999999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.9e-51  Score=351.79  Aligned_cols=244  Identities=27%  Similarity=0.458  Sum_probs=220.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..|.||++|||||++|||+++|++|+++|++|++++ ++++.++++.+++.+.+.++.+++||++++++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999864 5667788999999999999999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccc-cccCCCc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLH-YTASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~-~~~~~~~  167 (299)
                      +|++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++         .+++++++|..+ ..+.+++
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---------~g~~iii~s~~~~~~~~~~~  152 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---------GGRIILTSSIAAVMTGIPNH  152 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---------EEEEEEECCGGGTCCSCCSC
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhc---------CCcccccccccccccCCCCc
Confidence            999999999999988899999999999999999999999999999999965         366777766655 4478899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCC-----------CCCCCchHHhHHHHhcCCCCCCCCHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPG-----------MNKLAPDEINSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~d  236 (299)
                      ..|+++|+|+.+|+|+|+.||+ ++|||||+|+||+++|++.           ......++..+......|++|+++|+|
T Consensus       153 ~~Y~asK~al~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~e  231 (259)
T d1ja9a_         153 ALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPAD  231 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHh-hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHH
Confidence            9999999999999999999998 8899999999999987531           222345667788889999999999999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ||++++||+|+.++++||+.|.+|||.
T Consensus       232 Va~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         232 IGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            999999999999999999999999996

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.3e-51  Score=348.72  Aligned_cols=239  Identities=29%  Similarity=0.431  Sum_probs=210.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++.   +++.+.++.++++|++++++++++++++.+++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA---VAALEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            58899999999999999999999999999999999999766554   445577899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+.         +.|+++|| .+..+.+++..|
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~---------~~i~~~ss-~a~~~~~~~~~Y  148 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG---------GSLVLTGS-VAGLGAFGLAHY  148 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT---------CEEEEECC-CTTCCHHHHHHH
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccc---------cceeeccc-cccccccCcccc
Confidence            99999999999888999999999999999999999999999999988653         44555555 455566889999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCC
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGK  250 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  250 (299)
                      +++|+|+++|+++||.||+ ++|||||+|+||+++|++ ...+ +++..+...+..|++|+.+|+|+|++++||+|+.++
T Consensus       149 ~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~-~~~~-~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~  225 (241)
T d2a4ka1         149 AAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPM-TAGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESA  225 (241)
T ss_dssp             HHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGG-GTTS-CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             chhhHHHHHHHHHHHHHHh-HhCCEEeeeccCcCCCHH-HHhh-hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhC
Confidence            9999999999999999997 999999999999998664 3344 456667778889999999999999999999999999


Q ss_pred             CccCcEEEeCCcccc
Q 022335          251 YVNGTTLIVDGGLWL  265 (299)
Q Consensus       251 ~~~G~~i~~dgg~~~  265 (299)
                      |+||++|.+|||+++
T Consensus       226 ~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         226 YITGQALYVDGGRSI  240 (241)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CCcCceEEeCCCccc
Confidence            999999999999986

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.7e-51  Score=342.46  Aligned_cols=231  Identities=25%  Similarity=0.381  Sum_probs=208.2

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++       .+  ..++.||+++.      ++.+.+++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~--~~~~~~Dv~~~------~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG--HRYVVCDLRKD------LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC--SEEEECCTTTC------HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC--CcEEEcchHHH------HHHHHHHhCC
Confidence            689999999999999999999999999999999999865443       22  35678999863      4556678899


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|+||||||+....++.+.+.++|++.+++|+.+++.++++++|+|+++.       .|+||+++|..+..+.++...|+
T Consensus        67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-------~G~ii~i~S~~~~~~~~~~~~Y~  139 (234)
T d1o5ia_          67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-------WGRIVAITSFSVISPIENLYTSN  139 (234)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTBHHHH
T ss_pred             CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-------cccccccccccccccccccccch
Confidence            99999999998888999999999999999999999999999999999987       79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                      +||+|+.+|+++++.||+ ++|||||+|+||+++|++.. ...+++..+......|++|+.+|+|+|++++||+|+.++|
T Consensus       140 asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~-~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~  217 (234)
T d1o5ia_         140 SARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVK-ELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASY  217 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHH-HHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHHHHHHHHHhc-ccCeEEeecccCccchhhhh-hhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcC
Confidence            999999999999999998 89999999999999876543 3335566677888999999999999999999999999999


Q ss_pred             ccCcEEEeCCccccC
Q 022335          252 VNGTTLIVDGGLWLS  266 (299)
Q Consensus       252 ~~G~~i~~dgg~~~~  266 (299)
                      +|||+|.+|||++.+
T Consensus       218 itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         218 LTGQTIVVDGGLSKF  232 (234)
T ss_dssp             CCSCEEEESTTCCCC
T ss_pred             CcCcEEEECcccccC
Confidence            999999999999763

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.4e-50  Score=348.87  Aligned_cols=246  Identities=29%  Similarity=0.467  Sum_probs=219.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR-KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+|+||++|||||++|||+++|+.|+++|++|++++++ ++.++++.+++++.+.++.++.+|++++++++++++++.+.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            45999999999999999999999999999999999876 56788889999988899999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCCc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQ  167 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~  167 (299)
                      +|++|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.+         .+++++++|..+. .+.+.+
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---------~g~~i~i~s~~~~~~~~~~~  164 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---------GGRLILMGSITGQAKAVPKH  164 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---------TCEEEEECCGGGTCSSCSSC
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc---------ccccccccccccccccccch
Confidence            999999999999988899999999999999999999999999999999975         4778888887654 457778


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC----------CCCCchH-HhHHHHhcCCCCCCCCHHH
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM----------NKLAPDE-INSKARDYMPLYKLGEKWD  236 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~d  236 (299)
                      ..|+++|+|+++|+++++.||+ ++|||||+|+||+++|++..          .....++ .........|++|+.+|+|
T Consensus       165 ~~Y~asKaal~~ltk~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~pee  243 (272)
T d1g0oa_         165 AVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPID  243 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhc-hhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHH
Confidence            9999999999999999999998 89999999999999875321          1112222 2234567899999999999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ||++++||+|+.+.|+||++|.+|||.++
T Consensus       244 vA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         244 IARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            99999999999999999999999999875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=7.9e-50  Score=337.46  Aligned_cols=229  Identities=20%  Similarity=0.274  Sum_probs=210.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCe-------EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGAS-------VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~-------Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +++|||||++|||+++|++|+++|++       |++++|+.+.++++.+++.+.+.++.++.||++++++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999998       89999999999999999998888999999999999999999999999


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                      +||++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       +|+||++||..+..+.+++
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-------~G~Ii~isS~~~~~~~~~~  154 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-------SGHIFFITSVAATKAFRHS  154 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCGGGTSCCTTC
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-------CCceEEEechhhcCCCCCC
Confidence            999999999999999889999999999999999999999999999999999987       7999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  247 (299)
                      ..|++||+|+.+|+++|+.|++ ++|||||+|+||+++|++. .....+.          ..++.+|||+|++++||+++
T Consensus       155 ~~Y~asK~al~~lt~~la~el~-~~gIrvn~i~PG~v~T~~~-~~~~~~~----------~~~~~~PedvA~~v~~l~s~  222 (240)
T d2bd0a1         155 SIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMW-GKVDDEM----------QALMMMPEDIAAPVVQAYLQ  222 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTT-CCCCSTT----------GGGSBCHHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEeeeCcccCchh-hhcCHhh----------HhcCCCHHHHHHHHHHHHcC
Confidence            9999999999999999999997 8999999999999987653 3332221          12467999999999999999


Q ss_pred             CCCCccCc-EEEeCCc
Q 022335          248 TGKYVNGT-TLIVDGG  262 (299)
Q Consensus       248 ~~~~~~G~-~i~~dgg  262 (299)
                      .+++++|+ .+.++||
T Consensus       223 ~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         223 PSRTVVEEIILRPTSG  238 (240)
T ss_dssp             CTTEEEEEEEEEETTC
T ss_pred             CccCccCCEEEEecCC
Confidence            88888876 4557776

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.5e-49  Score=346.29  Aligned_cols=272  Identities=33%  Similarity=0.510  Sum_probs=235.6

Q ss_pred             CCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHH
Q 022335            7 FKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus         7 ~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      |+..+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++.+|++++++++++++.+
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence            3446899999999999999999999999999999999999999999988888654 678999999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW  165 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~  165 (299)
                      .+.++++|+||||||.....++.+.+.++|...+.+|+.+.+.+.+...+.+.....      .+.+++++|..+..+.+
T Consensus        98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~i~~~ss~~~~~~~~  171 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK------GAAFLSITTIYAETGSG  171 (294)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------CEEEEEECCTHHHHCCT
T ss_pred             hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc------cccccccccchhhhccc
Confidence            999999999999999988888899999999999999999999999998887776542      67899999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC-chHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          166 YQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA-PDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       166 ~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +..+|++||+|+.+|++++|.||+ ++|||||+|+||+++|++...... .+...+......|++|+++|+|+|++++||
T Consensus       172 ~~~~YsasKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL  250 (294)
T d1w6ua_         172 FVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFL  250 (294)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHH
Confidence            999999999999999999999998 899999999999998876544433 445667788899999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccCCCCCCc--hhHHHHHhHhhhh
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLSRPRHLP--KDAVKQLSRTVEK  285 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~~~~~~~--~~~~~~~~~~~~~  285 (299)
                      +|+.+.|+||++|.+|||+++....-..  .......|+..++
T Consensus       251 ~sd~s~~itG~~i~vDGG~~l~~~~~~~~~~~~~~~~~~~~~~  293 (294)
T d1w6ua_         251 CSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEE  293 (294)
T ss_dssp             TSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTT
T ss_pred             hCchhcCCCCcEEEECCChhheeCCCCCchhhcchhhhhhHhh
Confidence            9999999999999999999865443222  2334555665543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-50  Score=343.71  Aligned_cols=239  Identities=26%  Similarity=0.332  Sum_probs=210.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.  +.++.+++||++++++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            6999999999999999999999999999999999999999999988664  45799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ++|+||||||+...        ++|++.+++|+.+++.++++++|+|.++....    +|+||++||..+..+.++..+|
T Consensus        82 ~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~----~g~Iv~isS~~~~~~~~~~~~Y  149 (254)
T d2gdza1          82 RLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGE----GGIIINMSSLAGLMPVAQQPVY  149 (254)
T ss_dssp             CCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCC----CEEEEEECCGGGTSCCTTCHHH
T ss_pred             CcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCC----CcEEEeeccHhhccCCCCccch
Confidence            99999999997643        45889999999999999999999998865322    5899999999999999999999


Q ss_pred             HHHHHHHHHHHHH--HHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc------hHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          171 AAAKAAVDAITRN--LALEWGADYDIRVNGIAPGPIGDTPGMNKLAP------DEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       171 ~~sKaal~~l~~~--la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      ++||+|+.+|+|+  |+.||+ ++|||||+|+||+|+|++.......      .+..+......|++|+.+|+|+|++++
T Consensus       150 ~asKaal~~ltrs~ala~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  228 (254)
T d2gdza1         150 CASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLI  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999999999997  688997 8999999999999987643222211      223455566778899999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCccccC
Q 022335          243 YLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ||+|+.  ++||++|.+|||+.+.
T Consensus       229 fL~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         229 TLIEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHHHCT--TCSSCEEEEETTTEEE
T ss_pred             HHHcCC--CCCCCEEEECCCCeee
Confidence            999864  5999999999998763

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-49  Score=339.79  Aligned_cols=246  Identities=21%  Similarity=0.256  Sum_probs=214.8

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      |..|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+++.+.+  .++.+++||++++++++++++++.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999999999999999998764  578999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc--C
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA--S  164 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~--~  164 (299)
                      ++||++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|++++..     +|+||++||..+...  .
T Consensus        85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~-----~g~Ii~isS~~~~~~~p~  159 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD-----DGHIININSMSGHRVLPL  159 (257)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-----SCEEEEECCGGGTSCCSC
T ss_pred             HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccC-----CCceEEEechHhcCCCCC
Confidence            999999999999999988999999999999999999999999999999999886522     589999999998754  4


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEW--GADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~--~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      +....|+++|+|+.+|+++|+.|+  + ++||+||+|+||+++|++.. .... ...+......|.+++.+|+|+|++++
T Consensus       160 ~~~~~Y~~sKaal~~ltr~la~el~~~-~~~I~vn~i~PG~i~t~~~~-~~~~-~~~~~~~~~~~~~r~~~pedvA~~v~  236 (257)
T d1xg5a_         160 SVTHFYSATKYAVTALTEGLRQELREA-QTHIRATCISPGVVETQFAF-KLHD-KDPEKAAATYEQMKCLKPEDVAEAVI  236 (257)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEEESCBCSSHHH-HHTT-TCHHHHHHHHC---CBCHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCHHHHHHHHHhC-CCCEEEEEEeCCCCCChhhh-hcCh-hhHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            567789999999999999999998  5 78999999999999765422 2222 22344556678999999999999999


Q ss_pred             HHcCCCCCCccCcEEEeCCc
Q 022335          243 YLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg  262 (299)
                      ||+|+.+.++|||++..++|
T Consensus       237 fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         237 YVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHSCTTEEEEEEEEEETT
T ss_pred             HHhCChhcCeECCEEEEeCC
Confidence            99999999999997555544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-49  Score=337.68  Aligned_cols=239  Identities=23%  Similarity=0.312  Sum_probs=211.3

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|++++++++.+     ...+....+|+.+.+.++.    ..+.+
T Consensus         2 ~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~----~~~~~   72 (245)
T d2ag5a1           2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQ----FANEV   72 (245)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHH----HHHHC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccc----ccccc
Confidence            35899999999999999999999999999999999999877665433     2357888999988776554    45567


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc-ccCCCch
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY-TASWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~-~~~~~~~  168 (299)
                      +++|+||||+|.....++.+.+.++|+..+++|+.+++.++++++|+|.++.       .|+||+++|..+. .+.+.+.
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-------~g~Ii~isS~~~~~~~~~~~~  145 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-------SGNIINMSSVASSVKGVVNRC  145 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEECCSBTTTBCCTTBH
T ss_pred             ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-------CceeeeeechhhccCCccchh
Confidence            8999999999999889999999999999999999999999999999999987       7999999998774 6788999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC----CCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN----KLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +|+++|+|+++|+|+||.||+ ++|||||+|+||+++|++...    ....+...+......|++|+.+|+|+|+++.||
T Consensus       146 ~Y~~sKaal~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL  224 (245)
T d2ag5a1         146 VYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL  224 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999998 899999999999998764321    123445667778889999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCcccc
Q 022335          245 TSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +|+.+.++|||+|.+|||+++
T Consensus       225 ~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         225 ASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             HSGGGTTCCSCEEEECTTGGG
T ss_pred             hChhhCCCcCceEEeCCCcCC
Confidence            999999999999999999975

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5e-49  Score=342.94  Aligned_cols=231  Identities=23%  Similarity=0.301  Sum_probs=204.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC---------hhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR---------KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~---------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .|+||++|||||++|||+++|++|+++|++|++.+++         .+.++++.+++....   ..+.+|+++.++++++
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHHHH
Confidence            5789999999999999999999999999999998654         456677777776543   4457899999999999


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccc
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHY  161 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~  161 (299)
                      ++++.+++|++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++       .|+||++||..+.
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-------~G~IV~isS~~~~  153 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-------YGRIIMTASASGI  153 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CEEEEEECCHHHH
T ss_pred             HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-------CcEEEEeCChhhc
Confidence            999999999999999999999999999999999999999999999999999999999987       7999999999999


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          162 TASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       162 ~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      .+.++...|++||+|+.+|+++|+.|++ ++|||||+|+||++. ++....++ ++..          +..+|+|+|+++
T Consensus       154 ~~~~~~~~Y~asKaal~~lt~~la~E~~-~~gIrVN~I~PG~~~-t~~~~~~~-~~~~----------~~~~PedvA~~v  220 (302)
T d1gz6a_         154 YGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAGS-RMTETVMP-EDLV----------EALKPEYVAPLV  220 (302)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECCS-TTTGGGSC-HHHH----------HHSCGGGTHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHHHHHHh-ccCCceeeeCCCCCC-cchhhcCc-HhhH----------hcCCHHHHHHHH
Confidence            9999999999999999999999999997 899999999999994 44433332 2222          236899999999


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +||+|+.+ ++||++|.+|||+.-
T Consensus       221 ~fL~S~~a-~itG~~i~vdGG~~~  243 (302)
T d1gz6a_         221 LWLCHESC-EENGGLFEVGAGWIG  243 (302)
T ss_dssp             HHHTSTTC-CCCSCEEEEETTEEE
T ss_pred             HHHcCCCc-CCCCcEEEeCCCcee
Confidence            99999765 799999999999754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-46  Score=316.12  Aligned_cols=218  Identities=18%  Similarity=0.218  Sum_probs=197.7

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.++.++.||++++++++++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999999999999999888999999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      |++|++|||||+.....+.+.+.++|++++++|+.|+++++++++|.|++++       .|+||++||..+..+.+++.+
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-------~G~Iv~isS~~~~~~~~~~~~  155 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-------HGHIVTVASAAGHVSVPFLLA  155 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-------CEEEEEECCCC-CCCHHHHHH
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-------CceEEEeecchhcCCCCCcHH
Confidence            9999999999999888999999999999999999999999999999999987       799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcC
Q 022335          170 VAAAKAAVDAITRNLALEWGA--DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~--~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  246 (299)
                      |++||+|+.+|+++|+.|++.  .+||+||+|+||+|+|++....  .    .      +.....+|+++|+.++..+.
T Consensus       156 Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~--~----~------~~~~~~~pe~va~~i~~~~~  222 (244)
T d1yb1a_         156 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--S----T------SLGPTLEPEEVVNRLMHGIL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--H----H------HHCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc--C----c------cccCCCCHHHHHHHHHHHHh
Confidence            999999999999999999851  2589999999999987643221  0    1      12345789999999887653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.7e-46  Score=317.82  Aligned_cols=241  Identities=19%  Similarity=0.158  Sum_probs=209.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGK---HGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~---~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|+++.++++.+++...  +.++.+++||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            468899999999999999999999996   7999999999999999999999765  45789999999999999999998


Q ss_pred             HHHH----cCCccEEEEcCCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           85 TFEH----FGKLDILVNAAAGNF---LVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        85 ~~~~----~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +.+.    ++.+|++|||||...   ..++.+.+.++|++++++|+.++++++++++|+|++++.     ..|+||++||
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~-----~~g~Iv~isS  156 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG-----LSKTVVNISS  156 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT-----CEEEEEEECC
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC-----Cccccccccc
Confidence            8763    467899999999754   345778999999999999999999999999999987541     1489999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC---CCCchHHhHHHHhcCCCCCCCCH
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN---KLAPDEINSKARDYMPLYKLGEK  234 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  234 (299)
                      ..+..+.+++.+|++||+|+++|+++|+.|   .+|||||+|+||+|+|++...   ....++..+.+....+.+++.+|
T Consensus       157 ~~~~~~~~~~~~Y~asKaal~~lt~~la~e---~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p  233 (259)
T d1oaaa_         157 LCALQPYKGWGLYCAGKAARDMLYQVLAAE---EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDC  233 (259)
T ss_dssp             GGGTSCCTTCHHHHHHHHHHHHHHHHHHHH---CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCH
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHhC---CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCH
Confidence            999999999999999999999999999998   349999999999998764321   12234555666677788999999


Q ss_pred             HHHHHHHHHHcCCCCCCccCcEEEe
Q 022335          235 WDIAMAALYLTSDTGKYVNGTTLIV  259 (299)
Q Consensus       235 ~dva~~~~~l~s~~~~~~~G~~i~~  259 (299)
                      +|+|+.+++|+++ ..++||++|++
T Consensus       234 ~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         234 GTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             HHHHHHHHHHhhh-ccCCCCCeEEe
Confidence            9999999999986 46999999986

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.5e-46  Score=318.53  Aligned_cols=239  Identities=18%  Similarity=0.145  Sum_probs=197.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCC-CHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVR-RQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~-~~~~v~~~~~~~~~~   88 (299)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++.+...+..... +.++.++.+|++ +.++++++++++.++
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998877766654443333 457999999998 678899999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +|++|+||||||..        +.++|++++++|+.++++++++++|.|.+++.    .+.|+||+++|..+..+.+++.
T Consensus        82 ~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~----~~~g~Ii~isS~~~~~~~~~~~  149 (254)
T d1sbya1          82 LKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG----GPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT----CCCEEEEEECCGGGTSCCTTSH
T ss_pred             cCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc----CCCceEEEEechhhccCCCCCH
Confidence            99999999999954        34679999999999999999999999987642    1269999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      +|++||+|+.+|+++|+.||+ ++|||||+|+||+|+|++........+..+.........+..+||++|+.++++++. 
T Consensus       150 ~Y~asKaal~~~t~~la~el~-~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~-  227 (254)
T d1sbya1         150 VYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA-  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHhhcc-ccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC-
Confidence            999999999999999999997 889999999999998764332222222222222222334567899999998887753 


Q ss_pred             CCCccCcEEEeCCcccc
Q 022335          249 GKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~  265 (299)
                        +.||+++.+|||+..
T Consensus       228 --~~tG~vi~vdgG~l~  242 (254)
T d1sbya1         228 --NKNGAIWKLDLGTLE  242 (254)
T ss_dssp             --CCTTCEEEEETTEEE
T ss_pred             --CCCCCEEEECCCEeC
Confidence              359999999999743

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.7e-44  Score=312.53  Aligned_cols=246  Identities=23%  Similarity=0.341  Sum_probs=204.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHhcC-CcEEE-----------------EEcCCCCHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGR-RKQVLDAAVSALRSLG-IKAVG-----------------FEGDVRRQE   76 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~-~~v~~-----------------~~~Dl~~~~   76 (299)
                      ++|||||++|||+++|++|+++|++|+++++ +++..+++.+++.... .....                 +.+|+++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            7999999999999999999999999998765 5667788888887543 33444                 456699999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHH--------------HHHHhhhHHHHHHHHHHHHHHHhcCC
Q 022335           77 HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFR--------------TVMDIDSVGTFTMCHEALKYLKKGGP  142 (299)
Q Consensus        77 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~m~~~~~  142 (299)
                      +++++++++.+++|++|+||||||+..+.++.+.+.++|+              .++.+|+.+++++.+.+.+.+.....
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  163 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  163 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHH
Confidence            9999999999999999999999999888877776655544              57899999999999999998765431


Q ss_pred             CCCCCCCceEEEeccccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHH
Q 022335          143 GRSSAGGGSILNISATLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKA  222 (299)
Q Consensus       143 ~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~  222 (299)
                       +.....++||+++|.....+.+++.+|++||+|+.+|+++++.||+ ++|||||+|+||++.+..   .+ .++..+..
T Consensus       164 -~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~t~~~~---~~-~~~~~~~~  237 (284)
T d1e7wa_         164 -KHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD---DM-PPAVWEGH  237 (284)
T ss_dssp             -GGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG---GS-CHHHHHHH
T ss_pred             -HhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhC-Cccccccccccccccccc---cC-CHHHHHHH
Confidence             1222368999999999999999999999999999999999999998 899999999999875332   22 45566667


Q ss_pred             HhcCCC-CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          223 RDYMPL-YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       223 ~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      ....|+ +|+.+|+|+|++++||+|+.+.|+|||+|.+|||+++++
T Consensus       238 ~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         238 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             HTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence            777775 899999999999999999999999999999999999865

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=307.12  Aligned_cols=240  Identities=24%  Similarity=0.373  Sum_probs=206.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.+.....+|+.+.+.++.....+...++
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG   78 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999999888877766   45788899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           91 KLDILVNAAAGNFL------VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        91 ~id~lv~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      .+|.+++|+++...      .++.+.+.++|++++++|+.+++++++++.|+|..+...+ ...+|+||++||..+..+.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~-~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQ-GGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCT-TSCCEEEEEECCTHHHHCC
T ss_pred             cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhc-cCCceEEEEecchhhccCC
Confidence            99999999876543      3456678899999999999999999999999998764322 2336899999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALY  243 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  243 (299)
                      +++.+|++||+|+++|+++|+.|++ ++|||||+|+||+++|++. ... +++..+......|+ +|+++|+|||++++|
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~e~~-~~gIrvN~I~PG~i~T~~~-~~~-~~~~~~~~~~~~pl~~R~g~peevA~~v~f  234 (248)
T d2o23a1         158 VGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLL-TSL-PEKVCNFLASQVPFPSRLGDPAEYAHLVQA  234 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhc-ccCcceeeeccCceecchh-hcC-CHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999998 8999999999999986643 333 33445566667776 899999999999999


Q ss_pred             HcCCCCCCccCcEEEe
Q 022335          244 LTSDTGKYVNGTTLIV  259 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~  259 (299)
                      |++  ++|+|||+|.+
T Consensus       235 L~s--~~~itGq~I~v  248 (248)
T d2o23a1         235 IIE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHH--CTTCCSCEEEE
T ss_pred             HHh--CCCCCceEeEC
Confidence            996  57999999975

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.9e-45  Score=311.37  Aligned_cols=246  Identities=22%  Similarity=0.255  Sum_probs=217.0

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++.....+...+.+|+++.+++...++++.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            58899999999998  899999999999999999999996654444 555555566788899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCC-----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           89 FGKLDILVNAAAGNFLVSA-----EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      ++++|++|||+++.....+     .....+.|...+++|+.+.+.+.+.+.+.|.+         ++.||++||..+..+
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~Ii~iss~~~~~~  151 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---------GSALLTLSYLGAERA  151 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEEECGGGTSB
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---------CcEEEEecchhhccC
Confidence            9999999999987654433     24556779999999999999999999998854         477999999999999


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY  243 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  243 (299)
                      .+.+..|++||+|+.+|+++++.||+ ++|||||+|+||+|+|++.......+...+......|++|+.+|||+|+++.|
T Consensus       152 ~~~~~~Y~~sKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~f  230 (258)
T d1qsga_         152 IPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF  230 (258)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhC-ccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999997 99999999999999877655555556667777888999999999999999999


Q ss_pred             HcCCCCCCccCcEEEeCCccccCC
Q 022335          244 LTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       244 l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      |+|+.+.++||++|.+|||+++..
T Consensus       231 L~s~~s~~itG~~i~vDGG~~i~g  254 (258)
T d1qsga_         231 LCSDLSAGISGEVVHVDGGFSIAA  254 (258)
T ss_dssp             HTSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HhCchhcCccCceEEECcCHHHhc
Confidence            999999999999999999998863

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.7e-44  Score=309.86  Aligned_cols=264  Identities=25%  Similarity=0.259  Sum_probs=214.4

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+.+....++.+|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            58999999999865  8999999999999999999999954 45556667666777888999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCC----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC
Q 022335           89 FGKLDILVNAAAGNFLVS----AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS  164 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~  164 (299)
                      +|++|++|||+|......    ..+..+..+...+.++..+.+...+.+.+.+..         ++.|+++++.....+.
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~i~~~s~~~~~~~~  151 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---------GASVLTLSYLGSTKYM  151 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEEECGGGTSBC
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc---------Ccceeeeccccccccc
Confidence            999999999999765432    223344444455555555554544444433211         3567777787778888


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      +....|+++|+|+.+|+++++.|++ ++|||||+|+||+++|++.......++.........|.+|+.+|+|+|++++||
T Consensus       152 ~~~~~y~asK~al~~ltr~lA~e~~-~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL  230 (274)
T d2pd4a1         152 AHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYL  230 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHHHHhhHHHhc-CcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHH
Confidence            8899999999999999999999998 999999999999998776555445566777777889999999999999999999


Q ss_pred             cCCCCCCccCcEEEeCCccccCCCCC--CchhHHHHHhHhhhh
Q 022335          245 TSDTGKYVNGTTLIVDGGLWLSRPRH--LPKDAVKQLSRTVEK  285 (299)
Q Consensus       245 ~s~~~~~~~G~~i~~dgg~~~~~~~~--~~~~~~~~~~~~~~~  285 (299)
                      +|+.+.++|||+|.+|||+++.....  .++.....+|...+|
T Consensus       231 ~S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~~  273 (274)
T d2pd4a1         231 LSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  273 (274)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             hChhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhcc
Confidence            99999999999999999998865444  347778889988765

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.5e-44  Score=316.76  Aligned_cols=244  Identities=21%  Similarity=0.256  Sum_probs=203.5

Q ss_pred             CCCEEEEec--CCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-C-----------CcEEEEEc--------
Q 022335           13 KGKVALITG--GGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-G-----------IKAVGFEG--------   70 (299)
Q Consensus        13 ~~k~vlItG--as~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~-----------~~v~~~~~--------   70 (299)
                      ++|++||||  +++|||+++|+.|+++|++|++++++.............. .           .....+.+        
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            489999999  5689999999999999999999998876544443332211 0           11223333        


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHcCCccEEEEcCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022335           71 ------------DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL--VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKY  136 (299)
Q Consensus        71 ------------Dl~~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  136 (299)
                                  |+++.++++++++.+.+.||++|+||||+|....  .++.+.+.++|++++++|+.+++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        6667888999999999999999999999997543  57888999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCceEEEeccccccccCCC-chHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCccCCCCCC----
Q 022335          137 LKKGGPGRSSAGGGSILNISATLHYTASWY-QIHVAAAKAAVDAITRNLALEWGAD-YDIRVNGIAPGPIGDTPGM----  210 (299)
Q Consensus       137 m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~-~~~Y~~sKaal~~l~~~la~e~~~~-~gi~v~~i~pG~v~t~~~~----  210 (299)
                      |++         +|+||++||..+..+.|+ ...|+++|+|+++|+++|+.||+ + +|||||+|+||+|+|+...    
T Consensus       161 m~~---------~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela-~~~gIRVNaI~PG~i~T~a~~~i~g  230 (329)
T d1uh5a_         161 MKP---------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAINK  230 (329)
T ss_dssp             EEE---------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCTTGGGCC-
T ss_pred             ccc---------ccccccceeehhcccccccchhhhhhhccccccchhhHHHHh-cccCcEEEEEecCcccchhhhcccc
Confidence            954         589999999999998886 46799999999999999999997 5 6999999999999873211    


Q ss_pred             ---------------------------------------CCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCC
Q 022335          211 ---------------------------------------NKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKY  251 (299)
Q Consensus       211 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  251 (299)
                                                             .....+...+......|++|+.+|+|||++++||+|+.+.|
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~  310 (329)
T d1uh5a_         231 LNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRA  310 (329)
T ss_dssp             -----------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             hhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence                                                   11123456677788899999999999999999999999999


Q ss_pred             ccCcEEEeCCccccC
Q 022335          252 VNGTTLIVDGGLWLS  266 (299)
Q Consensus       252 ~~G~~i~~dgg~~~~  266 (299)
                      +|||+|.+|||+++.
T Consensus       311 iTGq~i~VDGG~~~~  325 (329)
T d1uh5a_         311 ITGQTIYVDNGLNIM  325 (329)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             ccCCeEEECCCcccc
Confidence            999999999999763

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-44  Score=308.86  Aligned_cols=233  Identities=21%  Similarity=0.233  Sum_probs=188.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEE---eCChhHHHH---HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIM---GRRKQVLDA---AVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~---~r~~~~~~~---~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|++|||||++|||+++|+.|+++|++|+.+   .|+.+..++   ..+++...+.++.++.||++++++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5789999999999999999999999985544   555444444   4444444567899999999999999999988743


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCc
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQ  167 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~  167 (299)
                        |++|+||||+|.....++.+.+.++|++++++|+.|+++++++++|+|++++       .|+||++||..+..+.++.
T Consensus        82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-------~G~Iv~isS~~g~~~~~~~  152 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-------SGRVLVTGSVGGLMGLPFN  152 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-------CEEEEEEEEGGGTSCCTTC
T ss_pred             --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-------CCceEEEechhhcCCCCCc
Confidence              8999999999999889999999999999999999999999999999999987       7999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchH---------HhHHH------HhcCCCCCCC
Q 022335          168 IHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDE---------INSKA------RDYMPLYKLG  232 (299)
Q Consensus       168 ~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~---------~~~~~------~~~~~~~~~~  232 (299)
                      ..|++||+|+.+|+++|+.|++ ++||+||+|+||+|+|++........+         ..+.+      ....+..+..
T Consensus       153 ~~Y~asKaal~~l~~~la~El~-~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
T d1jtva_         153 DVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQ  231 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCC
Confidence            9999999999999999999997 899999999999998776544332211         11111      1223344678


Q ss_pred             CHHHHHHHHHHHcCCCC---CCccCcE
Q 022335          233 EKWDIAMAALYLTSDTG---KYVNGTT  256 (299)
Q Consensus       233 ~~~dva~~~~~l~s~~~---~~~~G~~  256 (299)
                      +|||||+++++++....   +|++|+.
T Consensus       232 ~PeeVA~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         232 NPEEVAEVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             CHHHHHHHHHHHHHCSSCCSEEESCST
T ss_pred             CHHHHHHHHHHHHhCCCCCeEEecHHH
Confidence            99999999999986543   4555543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2e-41  Score=290.46  Aligned_cols=246  Identities=28%  Similarity=0.374  Sum_probs=204.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhc-CCcEEEEEcCCC----CHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSL-GIKAVGFEGDVR----RQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~v~~~~~Dl~----~~~~v~~~~~~~~~~   88 (299)
                      .++|||||++|||+++|++|+++|++|++++|+.+ ..+++.+++... +.+...+.+|+.    ..+.++++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            37999999999999999999999999999999855 457777788665 456777766554    467788889999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCC-----------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAED-----------LSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +|++|++|||||+..+.++.+           ...+.+...+..|+.+.+...+...+.+.....  .....+.++++++
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  159 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGA--WRSRNLSVVNLCD  159 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEEEEEECC
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccc--cccccccchhhhh
Confidence            999999999999876654432           234557788899999999999988887765432  2223578999999


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCC-CCCHHH
Q 022335          158 TLHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYK-LGEKWD  236 (299)
Q Consensus       158 ~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d  236 (299)
                      ..+..+.+++..|++||+|+++|+++++.+++ ++|||||+|+||+++|+..    .+++..+.+.+..|+++ +.+|||
T Consensus       160 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~t~~~----~~~~~~~~~~~~~pl~r~~~~pee  234 (266)
T d1mxha_         160 AMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPA----MPQETQEEYRRKVPLGQSEASAAQ  234 (266)
T ss_dssp             GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCSS----SCHHHHHHHHTTCTTTSCCBCHHH
T ss_pred             ccccccCcchhhhhhhHHHHhhhHHHHHHHhC-ccCcEEEEeccCcEecccc----CCHHHHHHHHhcCCCCCCCCCHHH
Confidence            99999999999999999999999999999998 8999999999999987643    24566777888889866 489999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCccccCC
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWLSR  267 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~~~  267 (299)
                      +|++++||+|+.+.|+||++|.+|||+++.+
T Consensus       235 va~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         235 IADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            9999999999999999999999999999864

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.2e-42  Score=302.84  Aligned_cols=247  Identities=24%  Similarity=0.287  Sum_probs=202.0

Q ss_pred             CCCCCEEEEecCCC--hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-----------Cc-EEEEEcC-----
Q 022335           11 ILKGKVALITGGGS--GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-----------IK-AVGFEGD-----   71 (299)
Q Consensus        11 ~l~~k~vlItGas~--giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-----------~~-v~~~~~D-----   71 (299)
                      +|+||++|||||++  |||+++|++|+++|++|++++|++..............           .+ -....+|     
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            58899999999876  99999999999999999999997654333322221110           01 1233333     


Q ss_pred             ---------------CCCHHHHHHHHHHHHHHcCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH
Q 022335           72 ---------------VRRQEHAKKVVESTFEHFGKLDILVNAAAGNF--LVSAEDLSPNGFRTVMDIDSVGTFTMCHEAL  134 (299)
Q Consensus        72 ---------------l~~~~~v~~~~~~~~~~~g~id~lv~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  134 (299)
                                     .++.++++++++++.++||++|+||||||...  ..++.+.+.++|++.+++|+.+++.++++++
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence                           24556678999999999999999999999754  4678889999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCceEEEeccccccc-cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC
Q 022335          135 KYLKKGGPGRSSAGGGSILNISATLHYT-ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL  213 (299)
Q Consensus       135 ~~m~~~~~~~~~~~~g~iv~vsS~~~~~-~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~  213 (299)
                      +.|.+         ++.++++++..... ..+....|+++|+++..+++.++.+++.++|||||+|+||+++|++.....
T Consensus       165 ~~~~~---------~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~  235 (297)
T d1d7oa_         165 PIMNP---------GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             GGEEE---------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             HHhhc---------CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhcc
Confidence            88765         35566666655543 456778899999999999999999996357999999999999887665555


Q ss_pred             CchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          214 APDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ..++..+......|++|+.+|+|||++++||+|+.+.|+|||+|.+|||++..
T Consensus       236 ~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~  288 (297)
T d1d7oa_         236 FIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhc
Confidence            56677788888999999999999999999999999999999999999999863

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-42  Score=298.99  Aligned_cols=218  Identities=24%  Similarity=0.307  Sum_probs=190.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++..+++++.+.++.++.||+++.++++++++++.+++|++|
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            55699999999999999999986 99999999999999999999998888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---------  164 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---------  164 (299)
                      +||||||+.......+.+.++|+.+|++|+.+++++++.++|+|++         .|+||+++|..+..+.         
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---------~g~ivnisS~~~~~~~~~~~~y~~~  154 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---------QGRVVNVSSIMSVRALKSCSPELQQ  154 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---------EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cCCcccccccceeccccccchhhhh
Confidence            9999999988888888889999999999999999999999999964         5899999998764322         


Q ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEEEeCCccCCCCC
Q 022335          165 --------------------------------WYQIHVAAAKAAVDAITRNLALEWGA---DYDIRVNGIAPGPIGDTPG  209 (299)
Q Consensus       165 --------------------------------~~~~~Y~~sKaal~~l~~~la~e~~~---~~gi~v~~i~pG~v~t~~~  209 (299)
                                                      ....+|++||+|+..|++.++.+|+.   ..||+||+|+||+|+|++.
T Consensus       155 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                                            12356999999999999999999851   3599999999999987643


Q ss_pred             CCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHc--CCCCCCccCcEEE
Q 022335          210 MNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLT--SDTGKYVNGTTLI  258 (299)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~~~~~~~G~~i~  258 (299)
                      ...                 ...+|+|+|+++++++  ++...+.+|+++.
T Consensus       235 ~~~-----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         235 GPK-----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             CTT-----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             cCc-----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence            221                 2357999999999986  4556678999886

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-41  Score=285.43  Aligned_cols=234  Identities=26%  Similarity=0.374  Sum_probs=194.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +|++|||||++|||+++|++|+++|++|++++|+++            +.+...+.+|+++......+......... .+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-LF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-EE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhcccc-cc
Confidence            689999999999999999999999999999999864            34577789999999999999888776654 45


Q ss_pred             EEEEcCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           94 ILVNAAAGNFL----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        94 ~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      .+++++++...    ......+.+.|++++++|+.+++.+++.+.+.+....+ +.....|+||++||..+..+.+++.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~~~~~G~Ii~isS~~~~~~~~~~~~  146 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPP-DAEGQRGVIVNTASVAAFEGQIGQAA  146 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCC-CTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh-hcccCceeeeeecchhhccCCCCchh
Confidence            56666654322    34455778999999999999999999999999776532 33444799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  248 (299)
                      |+++|+|+.+|+++|+.||+ ++|||||+|+||+++|++... ... ...+......|. +|+++|||+|++++||+|  
T Consensus       147 Y~asKaal~~lt~~lA~ela-~~gIrVN~V~PG~i~T~~~~~-~~~-~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--  221 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQG-LPE-KAKASLAAQVPFPPRLGRPEEYAALVLHILE--  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHT-SCH-HHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--
T ss_pred             hHHHHHHHHHHHHHHHHHHh-hcCCceeeecCCcccccccch-hhh-hHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--
Confidence            99999999999999999998 899999999999998664433 323 333444444554 899999999999999998  


Q ss_pred             CCCccCcEEEeCCccccC
Q 022335          249 GKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       249 ~~~~~G~~i~~dgg~~~~  266 (299)
                      +.|+|||+|.+|||+++.
T Consensus       222 ~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         222 NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             CTTCCSCEEEESTTCCCC
T ss_pred             CCCCCCCEEEECCcccCC
Confidence            479999999999999874

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.1e-41  Score=286.48  Aligned_cols=231  Identities=18%  Similarity=0.162  Sum_probs=187.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHH---HcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--H
Q 022335           14 GKVALITGGGSGIGFEISTQFG---KHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE--H   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la---~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~--~   88 (299)
                      -|+||||||++|||+++|++|+   ++|++|++++|+++.++++.+ +.+.+.++.++.||++++++++++++++.+  .
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            3789999999999999999996   579999999999998887764 444467899999999999999999999854  6


Q ss_pred             cCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC----CCCCCCceEEEeccccccc-
Q 022335           89 FGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPG----RSSAGGGSILNISATLHYT-  162 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~----~~~~~~g~iv~vsS~~~~~-  162 (299)
                      ++++|+||||||+... ..+.+.+.++|++++++|+.+++.++++++|+|+++...    ......|+||+++|..+.. 
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            7899999999998665 467788999999999999999999999999999875311    1122368999999988764 


Q ss_pred             --cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHH
Q 022335          163 --ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMA  240 (299)
Q Consensus       163 --~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  240 (299)
                        +.+++.+|++||+|+++|+++++.|++ ++||+||+|+||+|+|++.....+                 .++++.++.
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~-~~gI~vn~v~PG~v~T~m~~~~~~-----------------~~~~~~~~~  222 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGSSAP-----------------LDVPTSTGQ  222 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCTTCS-----------------BCHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCCcccCCcccccCC-----------------CCchHHHHH
Confidence              456788999999999999999999997 889999999999998775432211                 123333444


Q ss_pred             HHHHcCCCCCCccCcEEEeCCcc
Q 022335          241 ALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       241 ~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ++.++.......+|++|.+||+.
T Consensus       223 i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         223 IVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHhcCccCCCcEEEECCeE
Confidence            44434333345689999999875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-40  Score=284.07  Aligned_cols=239  Identities=22%  Similarity=0.294  Sum_probs=202.5

Q ss_pred             CCCCCcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHH
Q 022335            4 ESPFKADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus         4 ~~~~~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      ++++....|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++... +..+.++.+|+++.++++.++
T Consensus         4 ~~~f~~~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   83 (269)
T d1xu9a_           4 NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFV   83 (269)
T ss_dssp             SSCCCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred             CccCCccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHH
Confidence            4556556699999999999999999999999999999999999999999998887654 567889999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT  162 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~  162 (299)
                      +.+.+.+|.+|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.        +|+||++||..+..
T Consensus        84 ~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--------~G~ii~isS~~~~~  155 (269)
T d1xu9a_          84 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--------NGSIVVVSSLAGKV  155 (269)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--------TCEEEEEEEGGGTS
T ss_pred             HHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--------CCcceEeccchhcC
Confidence            9999999999999999999888889999999999999999999999999999999865        59999999999999


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHH
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWG-ADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAA  241 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~-~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  241 (299)
                      +.+++.+|++||+|+++|+++|+.|++ +..||+||+|+||+|+|++......          ..+.....+|+++|..+
T Consensus       156 ~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~----------~~~~~~~~~~e~~a~~i  225 (269)
T d1xu9a_         156 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS----------GIVHMQAAPKEECALEI  225 (269)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC----------GGGGGGCBCHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc----------CCccccCCCHHHHHHHH
Confidence            999999999999999999999999985 1357999999999998753221111          11112246899999998


Q ss_pred             HHHcCCCCCCccCcEEEeCCcccc
Q 022335          242 LYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       242 ~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.......     ..+..+...++
T Consensus       226 ~~~~~~~~-----~~i~~~~~~~~  244 (269)
T d1xu9a_         226 IKGGALRQ-----EEVYYDSSLWT  244 (269)
T ss_dssp             HHHHHTTC-----SEEEECSCHHH
T ss_pred             HHHhhcCC-----CEEEccHHHHH
Confidence            87553222     34455555443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.3e-40  Score=285.75  Aligned_cols=243  Identities=23%  Similarity=0.212  Sum_probs=201.5

Q ss_pred             CCCCCCEEEEecC--CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGG--GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        10 ~~l~~k~vlItGa--s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      ..|+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+   ++. ..+.+...+.||++++++++++++.+.
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLPAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSSSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcCCceeeEeeecccccccccccchhh
Confidence            4689999999995  5799999999999999999999998865432   232 346678889999999999999999998


Q ss_pred             HHc---CCccEEEEcCCCCCC-----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccc
Q 022335           87 EHF---GKLDILVNAAAGNFL-----VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISAT  158 (299)
Q Consensus        87 ~~~---g~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~  158 (299)
                      +.+   +.+|++|||+|+...     .++.+.+.++|...+++|+.+.+...+.+.+.+.          .+.+++++|.
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~s~  148 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN----------PGGSIVGMDF  148 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE----------EEEEEEEEEC
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc----------cccccccccc
Confidence            765   679999999997532     3556788899999999999999999988876543          3556777777


Q ss_pred             cccccCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC----CCC------chHHhHHHHhcCCC
Q 022335          159 LHYTASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN----KLA------PDEINSKARDYMPL  228 (299)
Q Consensus       159 ~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~----~~~------~~~~~~~~~~~~~~  228 (299)
                      ....+.+++..|+++|+|+.+|+++++.||+ ++|||||+|+||+++|++...    ...      .+...+......|+
T Consensus       149 ~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl  227 (268)
T d2h7ma1         149 DPSRAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI  227 (268)
T ss_dssp             CCSSCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT
T ss_pred             cccccCcccchhhccccchhhccccchhhhh-ccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC
Confidence            8888889999999999999999999999998 999999999999998764311    111      12333455566887


Q ss_pred             CC-CCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          229 YK-LGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       229 ~~-~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                      ++ +.+|+|+|+++.||+|+...++||++|.+|||++.+
T Consensus       228 ~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         228 GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            66 899999999999999999999999999999999764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.4e-40  Score=279.08  Aligned_cols=231  Identities=16%  Similarity=0.177  Sum_probs=185.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+   ..+.+++++.||+++.++++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            3469999999999999999999999997  58889999987766432   235689999999999999999999999988


Q ss_pred             CC--ccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC----CCCCCCceEEEeccccccc
Q 022335           90 GK--LDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPG----RSSAGGGSILNISATLHYT  162 (299)
Q Consensus        90 g~--id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~----~~~~~~g~iv~vsS~~~~~  162 (299)
                      +.  +|+||||||+... .++.+.+.++|++++++|+.|++++++.++|+|+++...    ......++++++++.....
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence            64  9999999998654 678889999999999999999999999999999886422    1223358899998876543


Q ss_pred             c-------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHH
Q 022335          163 A-------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKW  235 (299)
Q Consensus       163 ~-------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (299)
                      .       .....+|++||+|+++|+++|+.||+ ++||+||+|+||+|+|++...                 ....+||
T Consensus       158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~-~~gI~v~~i~PG~v~T~m~~~-----------------~~~~~~e  219 (250)
T d1yo6a1         158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGK-----------------NAALTVE  219 (250)
T ss_dssp             TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC------------------------------H
T ss_pred             cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCCCCCCC-----------------CCCCCHH
Confidence            2       23456899999999999999999997 889999999999998764321                 1135788


Q ss_pred             HHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          236 DIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       236 dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      +.+..++..+.......+|+++..||.-
T Consensus       220 ~~a~~~~~~~~~~~~~~sG~f~~~~g~p  247 (250)
T d1yo6a1         220 QSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHhcCCCCCCeEEECCCCee
Confidence            9999998888776667899999888754

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-40  Score=278.53  Aligned_cols=227  Identities=15%  Similarity=0.059  Sum_probs=189.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      +||++|||||++|||+++|+.|+++|++|+++++++.+          .......+.+|.++.++++.+...+.+.+  +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999987642          12345667889999999999888887775  4


Q ss_pred             CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           91 KLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        91 ~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      ++|+||||||.... ..+.+.+.++|++.+++|+.++++++++++|+|++         +|+||++||..+..+.+++.+
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---------~G~Iv~isS~~~~~~~~~~~~  141 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---------GGLLTLAGAKAALDGTPGMIG  141 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---------EEEEEEECCGGGGSCCTTBHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---------ccceeEEccHHHcCCccCCcc
Confidence            79999999997655 45566778999999999999999999999999954         589999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGA-DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~-~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      |++||+|+++|+++|+.|++. ++||+||+|+||+++|++...          .....+..++.+|+++|+.+.+|+++.
T Consensus       142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~----------~~~~~~~~~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK----------SMPEADFSSWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHH----------HSTTSCGGGSEEHHHHHHHHHHHHTTT
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchh----------hCccchhhcCCCHHHHHHHHHHHhCCC
Confidence            999999999999999999952 469999999999998753221          122223456788999999999999999


Q ss_pred             CCCccCcEEEe--CCccccCCC
Q 022335          249 GKYVNGTTLIV--DGGLWLSRP  268 (299)
Q Consensus       249 ~~~~~G~~i~~--dgg~~~~~~  268 (299)
                      ..+++|+.+.+  ++|.+...|
T Consensus       212 ~~~i~G~~i~v~~~~g~t~~~p  233 (236)
T d1dhra_         212 KRPNSGSLIQVVTTDGKTELTP  233 (236)
T ss_dssp             TCCCTTCEEEEEEETTEEEEEE
T ss_pred             ccCCCCCeEEEEEECCEEEEEe
Confidence            99999987765  444443334

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.8e-38  Score=267.45  Aligned_cols=219  Identities=22%  Similarity=0.304  Sum_probs=168.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g~id   93 (299)
                      |++|||||++|||+++|++|+++|++|++++|++++                 ..+|+++.+..+....++..+. +.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            799999999999999999999999999999997642                 3679999999888877666554 6799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc----------------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA----------------  157 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS----------------  157 (299)
                      ++|||||+...       .+.|.....+|+.+...+.+.+.+.+.+..       ...+.++.+                
T Consensus        65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  130 (257)
T d1fjha_          65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGH-------QPAAVVISSVASAHLAFDKNPLALA  130 (257)
T ss_dssp             EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-------SCEEEEECCGGGGSSCGGGCTTHHH
T ss_pred             EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-------cCcceeeeeccccchhhhhhhhhhh
Confidence            99999997542       244678899999999999999999998865       334444433                


Q ss_pred             -----------ccccccC-CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHH-h
Q 022335          158 -----------TLHYTAS-WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR-D  224 (299)
Q Consensus       158 -----------~~~~~~~-~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~-~  224 (299)
                                 ..+..+. ++..+|++||+|+.+|+|+++.||+ ++|||||+|+||+++|++.......++..+... .
T Consensus       131 ~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  209 (257)
T d1fjha_         131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF  209 (257)
T ss_dssp             HHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC---------------------C
T ss_pred             ccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc-cccccccccccCCcCChhHHhhcCCHHHHHHHHhc
Confidence                       3333222 3456799999999999999999998 899999999999998876655554444444433 3


Q ss_pred             cCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          225 YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       225 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..|++|+.+|+|+|+++.||+|+.+.|+|||+|.+|||++.
T Consensus       210 ~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         210 VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            46999999999999999999999999999999999999875

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.2e-37  Score=262.03  Aligned_cols=223  Identities=17%  Similarity=0.100  Sum_probs=182.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH--cCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH--FGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~--~g~   91 (299)
                      .++||||||++|||+++|++|+++|++|++++|++..          .......+.+|+.+.+......+.+...  +++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND----------QADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT----------TSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchh----------cccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            3457999999999999999999999999999998742          1234556778999888888877777774  589


Q ss_pred             ccEEEEcCCCCCCC-CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           92 LDILVNAAAGNFLV-SAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        92 id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      +|+||||||+.... ...+.+.++|+.++++|+.++++++++++|+|++         +|+||++||..+..+.+++.+|
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---------~g~Iv~isS~~~~~~~~~~~~Y  142 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---------GGLLQLTGAAAAMGPTPSMIGY  142 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---------EEEEEEECCGGGGSCCTTBHHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---------ceEEEEeccHHhcCCcccccch
Confidence            99999999986653 4455556889999999999999999999999954         5899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHH-HcCCC
Q 022335          171 AAAKAAVDAITRNLALEWGA-DYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALY-LTSDT  248 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~-~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~-l~s~~  248 (299)
                      ++||+|+.+|+++|+.|++. +.+|+||+|+||+++|++...          .....+..++.+|+++++.+++ +.++.
T Consensus       143 ~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~----------~~~~~~~~~~~~~~~va~~~~~~l~~~~  212 (235)
T d1ooea_         143 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK----------WMPNADHSSWTPLSFISEHLLKWTTETS  212 (235)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH----------HSTTCCGGGCBCHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhh----------hCcCCccccCCCHHHHHHHHHHHhcCcc
Confidence            99999999999999999952 469999999999998653221          1122233467899999999874 55667


Q ss_pred             CCCccCcEEEe---CCcccc
Q 022335          249 GKYVNGTTLIV---DGGLWL  265 (299)
Q Consensus       249 ~~~~~G~~i~~---dgg~~~  265 (299)
                      .++++|+.+.+   ||+.++
T Consensus       213 ~~~~tG~~i~v~~~~g~~~~  232 (235)
T d1ooea_         213 SRPSSGALLKITTENGTSTI  232 (235)
T ss_dssp             GCCCTTCEEEEEEETTEEEE
T ss_pred             ccCCCceEEEEEeeCCEEEE
Confidence            78899999998   555544

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.98  E-value=5.7e-32  Score=230.44  Aligned_cols=222  Identities=14%  Similarity=0.094  Sum_probs=174.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK---QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++...+.++.++.||+++.++++++++++.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            67999999999999999999999999 488899874   4566777788888889999999999999999999987654 


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchH
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIH  169 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~  169 (299)
                      +++|++|||+|.....++.+.+.++|+.++++|+.+++++.+++    ....       .++||++||..+..+.+++..
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~-------~~~iv~~SS~a~~~g~~~~~~  156 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELD-------LTAFVLFSSFASAFGAPGLGG  156 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSC-------CSEEEEEEEHHHHTCCTTCTT
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccC-------CceEeeecchhhccCCcccHH
Confidence            68999999999999899999999999999999999999987754    3333       689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCCC
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  249 (299)
                      |+++|++++.|++.++     ..|+++++|+||++.++.+....    ..+.+ ...- -...+|+++++.+..++....
T Consensus       157 YaAaka~l~~la~~~~-----~~Gi~v~~I~pg~~~~~g~~~~~----~~~~~-~~~G-~~~~~~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         157 YAPGNAYLDGLAQQRR-----SDGLPATAVAWGTWAGSGMAEGP----VADRF-RRHG-VIEMPPETACRALQNALDRAE  225 (259)
T ss_dssp             THHHHHHHHHHHHHHH-----HTTCCCEEEEECCBC----------------C-TTTT-EECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhHHHHHHHHH-----hCCCCEEECCCCcccCCccccch----HHHHH-HhcC-CCCCCHHHHHHHHHHHHhCCC
Confidence            9999999998876554     45899999999998654332221    11111 1111 124689999999988886432


Q ss_pred             CCccCcEEEeC
Q 022335          250 KYVNGTTLIVD  260 (299)
Q Consensus       250 ~~~~G~~i~~d  260 (299)
                        ....++.+|
T Consensus       226 --~~~~v~~~d  234 (259)
T d2fr1a1         226 --VCPIVIDVR  234 (259)
T ss_dssp             --SSCEECEEC
T ss_pred             --ceEEEEeCc
Confidence              233344444

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=8.3e-20  Score=161.54  Aligned_cols=226  Identities=16%  Similarity=0.101  Sum_probs=153.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-----VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |+||||||+|.||.+++++|.++|++|++++|..+     ..+....+......++.++.+|++|.+++++++...    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            78999999999999999999999999999999543     233333333344568999999999999999999876    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-------  162 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-------  162 (299)
                       .+|+++|+|+......    +.++....+++|+.|+.++++++...-.+.        ..++|++||...+.       
T Consensus        78 -~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~--------~~r~i~~SS~~vYG~~~~~~~  144 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLGLEK--------KTRFYQASTSELYGLVQEIPQ  144 (357)
T ss_dssp             -CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTT--------TCEEEEEEEGGGGTTCCSSSB
T ss_pred             -CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCC--------CcEEEEEEchhhhCCCCCCCc
Confidence             7899999999765422    223345678999999999988875431111        35799999865331       


Q ss_pred             ----cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHH----hcC--------
Q 022335          163 ----ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKAR----DYM--------  226 (299)
Q Consensus       163 ----~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~----~~~--------  226 (299)
                          +......|+.||.+.+.+++.++..+    |+++..+.|+.+.++..............+.    ...        
T Consensus       145 ~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~----~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~  220 (357)
T d1db3a_         145 KETTPFYPRSPYAVAKLYAYWITVNYRESY----GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM  220 (357)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCT
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCC
Confidence                11235679999999999999988776    5889999998886553222221112211111    111        


Q ss_pred             -CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 -PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                       ..+.+...+|+++++..++..    -.|+.+++..|...
T Consensus       221 ~~~r~~~~v~D~~~a~~~~~~~----~~~~~yni~sg~~~  256 (357)
T d1db3a_         221 DSLRDWGHAKDYVKMQWMMLQQ----EQPEDFVIATGVQY  256 (357)
T ss_dssp             TCEECCEEHHHHHHHHHHTTSS----SSCCCEEECCCCCE
T ss_pred             CeeecceeechHHHHHHHHHhC----CCCCeEEECCCCce
Confidence             112367899999999887743    24677777766554

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=2.1e-21  Score=156.90  Aligned_cols=153  Identities=15%  Similarity=0.158  Sum_probs=113.8

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+|+||++|||||++|||+++++.|+++|++|++++|+.++++++.+++... .++.++.+|+++.+++++++       
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh-------
Confidence            4789999999999999999999999999999999999999999998888654 24566889999999987765       


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-CCCch
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-SWYQI  168 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-~~~~~  168 (299)
                      +++|+||||+|+.    +...+.++|+..+++|+.+.++....+...+...        ......+++.....+ ..+..
T Consensus        91 ~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~g~~  158 (191)
T d1luaa1          91 KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA--------TDKGKEYGGKRAFGALGIGGL  158 (191)
T ss_dssp             TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT--------TCEEEEETTEEEECHHHHHHH
T ss_pred             cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh--------ccCcEEecceEEEeccCcCcH
Confidence            4899999999963    3456889999999999887776544332222111        112222222222211 12345


Q ss_pred             HHHHHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITR  182 (299)
Q Consensus       169 ~Y~~sKaal~~l~~  182 (299)
                      .|+++|+++..+++
T Consensus       159 ~y~~sk~a~~~l~~  172 (191)
T d1luaa1         159 KLKLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHh
Confidence            79999999988775

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=7.3e-17  Score=141.46  Aligned_cols=223  Identities=15%  Similarity=0.056  Sum_probs=152.0

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+||+||||||+|.||.+++++|.++|++|+++.|+.+..+.+.......  .....++..|+++.+++.+++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            35999999999999999999999999999999999987776665544322  3345667899999988777654      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc------
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA------  163 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~------  163 (299)
                       .+|+++|+++....    ..+   ....+..|+.++.++++.+...   ..       -.++|++||......      
T Consensus        83 -~~~~v~~~a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~~~~---~~-------v~~~i~~SS~~~~~~~~~~~~  144 (342)
T d1y1pa1          83 -GAAGVAHIASVVSF----SNK---YDEVVTPAIGGTLNALRAAAAT---PS-------VKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             -TCSEEEECCCCCSC----CSC---HHHHHHHHHHHHHHHHHHHHTC---TT-------CCEEEEECCGGGTCCCCTTCC
T ss_pred             -cchhhhhhcccccc----ccc---ccccccchhhhHHHHHHhhhcc---cc-------cccccccccceeeccCCCCCC
Confidence             78999999985432    122   3356778999988887776532   11       368999999754211      


Q ss_pred             -------------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc---
Q 022335          164 -------------------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP---  215 (299)
Q Consensus       164 -------------------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~---  215 (299)
                                               ......|+.+|.+.+.+++.+++++.  .++++.+++|+.+..+........   
T Consensus       145 ~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~~i~p~~v~Gp~~~~~~~~~~~  222 (342)
T d1y1pa1         145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK--PHFTLNAVLPNYTIGTIFDPETQSGST  222 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC--CSSEEEEEEESEEECCCSCTTTCCCHH
T ss_pred             CccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc--cccccceecccceeCCCCCccccccch
Confidence                                     11235699999999999999998873  478888999887755432222211   


Q ss_pred             hHHhHHHHh--------cCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          216 DEINSKARD--------YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       216 ~~~~~~~~~--------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      .........        ..+...+..++|+|.+++..+..  ....|+.+...++
T Consensus       223 ~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~~  275 (342)
T d1y1pa1         223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcCC
Confidence            111111111        11222357789999997766532  2246666655544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=5.6e-17  Score=141.98  Aligned_cols=227  Identities=15%  Similarity=0.101  Sum_probs=152.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++|||||+|.||.++++.|+++|++|++++|.............. ...++.++++|+++.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            599999999999999999999999999998632211111111211 2357999999999999999988854     7999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----------  164 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  164 (299)
                      |||+|+....    ..+.++..+.+++|+.|+.++++++...    +       -.++|++||.....+.          
T Consensus        77 ViHlAa~~~~----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~-------v~~~i~~Ss~~vy~~~~~~~~~e~~~  141 (338)
T d1udca_          77 VIHFAGLKAV----GESVQKPLEYYDNNVNGTLRLISAMRAA----N-------VKNFIFSSSATVYGDQPKIPYVESFP  141 (338)
T ss_dssp             EEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----T-------CCEEEEEEEGGGGCSCCSSSBCTTSC
T ss_pred             EEECCCccch----hhHHhCHHHHHHhHHHHHHHHHHHHHHh----C-------CCEEEecCcceEEccccccccccccc
Confidence            9999985421    1122344578999999999998877643    2       3579999987655322          


Q ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC------CchHHhH----HHHhc-CC----
Q 022335          165 --WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL------APDEINS----KARDY-MP----  227 (299)
Q Consensus       165 --~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~------~~~~~~~----~~~~~-~~----  227 (299)
                        .....|+.+|.+.+.+.+....++.   ++.+..++|+.+..+......      .......    ..... .+    
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~  218 (338)
T d1udca_         142 TGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF  218 (338)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHST---TCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEE
T ss_pred             cCCCcchHHHHHhhhhHHHHHHHhhcc---CCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEe
Confidence              2356799999999999988777653   788888888877543211111      1111111    11111 11    


Q ss_pred             -----------CCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          228 -----------LYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       228 -----------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                                 .+.+...+|++.++..+.........++.+++.++..+
T Consensus       219 g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         219 GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             CSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             CCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCC
Confidence                       12245678998877665543344456778888876655

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=1.3e-16  Score=142.46  Aligned_cols=174  Identities=13%  Similarity=0.171  Sum_probs=126.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh----------------HHHHHHHHHHh-cCCcEEEEEcCCCCHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ----------------VLDAAVSALRS-LGIKAVGFEGDVRRQE   76 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~----------------~~~~~~~~~~~-~~~~v~~~~~Dl~~~~   76 (299)
                      |++||||||+|.||.+++++|+++|++|+++|.-..                ........+.. .+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            689999999999999999999999999999973111                11111222222 2567999999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEec
Q 022335           77 HAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNIS  156 (299)
Q Consensus        77 ~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vs  156 (299)
                      .++++++..     ++|+|+|.|+.... .....+.+.....+.+|+.|+.++++++...-.          ...+++.|
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~----------~~~~i~~s  144 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE----------ECHLVKLG  144 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT----------TCEEEEEC
T ss_pred             HHHHHHHhh-----cchheecccccccc-ccccccccccccccccccccccHHHHHHHHhcc----------ccceeecc
Confidence            999998865     79999999986432 112234466677899999999999887764311          24577777


Q ss_pred             ccccccc------------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCC
Q 022335          157 ATLHYTA------------------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDT  207 (299)
Q Consensus       157 S~~~~~~------------------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~  207 (299)
                      |......                        ......|+.||.+.+.+++.++.++    ++++.++.|+.+..+
T Consensus       145 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----~l~~~~lR~~~v~G~  215 (393)
T d1i24a_         145 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGV  215 (393)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECS
T ss_pred             ccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc----ceeeeecccccccCC
Confidence            7654321                        1223469999999999999888766    589999998877644

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.72  E-value=2.9e-17  Score=145.17  Aligned_cols=230  Identities=19%  Similarity=0.129  Sum_probs=155.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEE-EeCChhH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQV--LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~-~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +||||||+|.||.+++++|+++|+.|++ +++....  .+.. ..+ ....++.++.+|+++.++++.+++..     ++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDI-SESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-Hhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            5999999999999999999999998654 5542211  1111 111 11347999999999999999988764     79


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---------  163 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---------  163 (299)
                      |+|||+|+....    ..+.++...++++|+.++.++++++..........  .....++|++||...+..         
T Consensus        75 d~VihlAa~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~--~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (361)
T d1kewa_          75 DAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGED--KKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             SEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH--HHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CEEEECccccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--ccCceEEEEeccceeeCCCccCCcccc
Confidence            999999985431    11223345789999999999999988765431000  000257999999774421         


Q ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC---
Q 022335          164 ------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL---  228 (299)
Q Consensus       164 ------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---  228 (299)
                                  ......|+.||.+.+.+++.++..+    |+.+.+++|+.+..+..........+.......-+.   
T Consensus       149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~----~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~  224 (361)
T d1kewa_         149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred             ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEe
Confidence                        1124569999999999999988765    689999999888765432221112333333333222   


Q ss_pred             ------CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 ------YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ------~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                            +.+...+|+|+++..++...   ..|..+++..|...
T Consensus       225 g~g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~~Ni~s~~~~  264 (361)
T d1kewa_         225 GKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CCCCeEEeCEEHHHHHHHHHHHHhcC---CCCCeEEECCCCCc
Confidence                  12468999999998888533   24778888776544

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.5e-16  Score=127.17  Aligned_cols=198  Identities=17%  Similarity=0.130  Sum_probs=131.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ..|+++||||+|.||++++++|+++|++|.++.|++++++..      ...++.++.+|+++.+++.++++       +.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~~   68 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQ   68 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------CC
Confidence            356899999999999999999999999999999998763321      23458899999999999887766       68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCC----Cch
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASW----YQI  168 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~----~~~  168 (299)
                      |+||+++|........           +++..+..+    +++.+++.+       -.++|++||........    ...
T Consensus        69 d~vi~~~g~~~~~~~~-----------~~~~~~~~~----l~~aa~~~~-------v~r~i~~ss~~~~~~~~~~~~~~~  126 (205)
T d1hdoa_          69 DAVIVLLGTRNDLSPT-----------TVMSEGARN----IVAAMKAHG-------VDKVVACTSAFLLWDPTKVPPRLQ  126 (205)
T ss_dssp             SEEEECCCCTTCCSCC-----------CHHHHHHHH----HHHHHHHHT-------CCEEEEECCGGGTSCTTCSCGGGH
T ss_pred             CEEEEEeccCCchhhh-----------hhhHHHHHH----HHHHHHhcC-------CCeEEEEeeeeccCCCcccccccc
Confidence            9999999864332111           122233333    344556654       46899999876544332    223


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHHHHcCCC
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  248 (299)
                      .|...|.+.+.+.+        ..|++...|+||++.+.+.......      .........+.+.+|+|+.++..+...
T Consensus       127 ~~~~~~~~~e~~l~--------~~~~~~tiirp~~~~~~~~~~~~~~------~~~~~~~~~~i~~~DvA~~~~~~l~~~  192 (205)
T d1hdoa_         127 AVTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYTV------TLDGRGPSRVISKHDLGHFMLRCLTTD  192 (205)
T ss_dssp             HHHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCEE------ESSSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred             ccchHHHHHHHHHH--------hcCCceEEEecceecCCCCcccEEE------eeCCCCCCCcCCHHHHHHHHHHHhCCC
Confidence            55566655543322        3489999999998854322211100      001112234578999999999988653


Q ss_pred             CCCccCcEEEeCC
Q 022335          249 GKYVNGTTLIVDG  261 (299)
Q Consensus       249 ~~~~~G~~i~~dg  261 (299)
                      .  ..|+.+.+.+
T Consensus       193 ~--~~g~~~~~s~  203 (205)
T d1hdoa_         193 E--YDGHSTYPSH  203 (205)
T ss_dssp             T--TTTCEEEEEC
T ss_pred             C--CCCEEEecCC
Confidence            2  4588777654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.8e-16  Score=138.89  Aligned_cols=212  Identities=16%  Similarity=0.078  Sum_probs=143.1

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-----VLDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-----~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      |++|||||+|.||.+++++|.++|++|+.++|..+     .++.+..... ....++.++.+|+++.+.+.+++...   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            34499999999999999999999999999998643     1222222221 12347899999999999999998876   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----  163 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----  163 (299)
                        .+++++|.++....    ....+.....+++|+.++.++++++...-...        ..++|++||.+.+..     
T Consensus        79 --~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--------~~~~i~~SS~~vyg~~~~~~  144 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--------SVKFYQASTSELYGKVQEIP  144 (347)
T ss_dssp             --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--------TCEEEEEEEGGGTCSCSSSS
T ss_pred             --ccceeeeeeecccc----chhhccchhhhhhHHHHHHHHHHHHHHcCCCC--------CcEEEEecchheecCCCCCC
Confidence              78899999875421    11234455678999999999988875442211        357999998764311     


Q ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHH----hHHHHhcC-------
Q 022335          164 ------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI----NSKARDYM-------  226 (299)
Q Consensus       164 ------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~----~~~~~~~~-------  226 (299)
                            ......|+.||.+.+.+++.++..+    ++.+..++|+.+..+...........    ........       
T Consensus       145 ~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~----~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~  220 (347)
T d1t2aa_         145 QKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGN  220 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCC
Confidence                  1224579999999999999887765    58888899887765432222211111    11111111       


Q ss_pred             --CCCCCCCHHHHHHHHHHHcCC
Q 022335          227 --PLYKLGEKWDIAMAALYLTSD  247 (299)
Q Consensus       227 --~~~~~~~~~dva~~~~~l~s~  247 (299)
                        ..+.+...+|+++++..++..
T Consensus       221 g~~~r~~i~v~D~~~a~~~~~~~  243 (347)
T d1t2aa_         221 LDAKRDWGHAKDYVEAMWLMLQN  243 (347)
T ss_dssp             TTCEECCEEHHHHHHHHHHHHHS
T ss_pred             CcceeeeeEecHHHHHHHHHhhc
Confidence              123467889999999887754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=7.1e-16  Score=134.49  Aligned_cols=216  Identities=14%  Similarity=0.033  Sum_probs=146.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-----VLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-----~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .|++|||||+|.||.+++++|+++|++|+.++|..+     +...+...... ....+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            378999999999999999999999999999998532     22222211111 1346889999999999999988865  


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc----
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~----  163 (299)
                         ++|+|||+|+.....    ...+.....+..|+.+...+..++.........      ..++++.||......    
T Consensus        79 ---~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~~~~~~ss~~~~~~~~~~  145 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR------TVKYYQAGSSEMFGSTPPP  145 (339)
T ss_dssp             ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC------CCEEEEEEEGGGGTTSCSS
T ss_pred             ---ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhccccccc------ceeeeecccceecccCCCC
Confidence               899999999864321    122344578899999999999988766555331      245666655443221    


Q ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHh----HHHHhcC-------
Q 022335          164 ------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEIN----SKARDYM-------  226 (299)
Q Consensus       164 ------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~----~~~~~~~-------  226 (299)
                            ......|+.+|.+.+.++...+..+    |+.+..++|+.+..+............    .......       
T Consensus       146 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~  221 (339)
T d1n7ha_         146 QSETTPFHPRSPYAASKCAAHWYTVNYREAY----GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGN  221 (339)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESC
T ss_pred             CCCCCCCCCcchhhHHHHHHHHHHHHHHHHh----CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCC
Confidence                  2235689999999999998888765    699999999888655322222111111    1111111       


Q ss_pred             --CCCCCCCHHHHHHHHHHHcCCC
Q 022335          227 --PLYKLGEKWDIAMAALYLTSDT  248 (299)
Q Consensus       227 --~~~~~~~~~dva~~~~~l~s~~  248 (299)
                        ..+.+...+|++.++..++...
T Consensus       222 ~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         222 LQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             TTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CCccccceeeehHHHHHHHHHhcC
Confidence              1123677999999998888643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=6.9e-16  Score=135.33  Aligned_cols=169  Identities=15%  Similarity=0.066  Sum_probs=124.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |+||||||+|.||.+++++|+++|++|+++++... ..+.....-.....++.++.+|+++.++++.++...     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            68999999999999999999999999999875321 112221111122456889999999999999988753     799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc----------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----------  163 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~----------  163 (299)
                      +|||+|+.....    ...+.-.....+|+.++.++.+++...    +       -.++|++||...+..          
T Consensus        77 ~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~----~-------i~~~i~~SS~~vyg~~~~~~~~~~~  141 (347)
T d1z45a2          77 SVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQY----N-------VSKFVFSSSATVYGDATRFPNMIPI  141 (347)
T ss_dssp             EEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHH----T-------CCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             EEEEcccccccc----ccccCcccccccchhhhHHHHHHHHhc----c-------cceEEeecceeeecCcccCCCCCcc
Confidence            999999865321    122333567889999999998887542    2       357999999665421          


Q ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccC
Q 022335          164 -----SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIG  205 (299)
Q Consensus       164 -----~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~  205 (299)
                           ......|+.||.+.+.+.+.+....  ..++.+..++|+.+.
T Consensus       142 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~~lR~~~v~  186 (347)
T d1z45a2         142 PEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPI  186 (347)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEE
T ss_pred             ccccCCCCCChhHhHHHHHHHHHHHHHHhh--ccCCcEEEEeecceE
Confidence                 1234579999999999999888764  557888888776554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=5.7e-16  Score=135.46  Aligned_cols=216  Identities=13%  Similarity=0.040  Sum_probs=148.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +||||||+|.||.+++++|+++|+ +|+++++.........     ...++.++.+|+++.+++.+.+..      ++|+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~------~~d~   70 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------KCDV   70 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH------HCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHh------CCCc
Confidence            599999999999999999999995 7999988654322221     135799999999987776553321      5899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----------  164 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  164 (299)
                      |||+|+.....    ...++....+.+|+.++.++++++...            +.+++++||.......          
T Consensus        71 Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~------------~~~~~~~ss~~~~~~~~~~~~~~~~~  134 (342)
T d2blla1          71 VLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY------------RKRIIFPSTSEVYGMCSDKYFDEDHS  134 (342)
T ss_dssp             EEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT------------TCEEEEECCGGGGBTCCCSSBCTTTC
T ss_pred             ccccccccccc----ccccCCccccccccccccccccccccc------------cccccccccccccccccccccccccc
Confidence            99999965421    112333567899999999998887532            3466777775543221          


Q ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCC----Cc----hHHhHHHHhc---
Q 022335          165 --------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKL----AP----DEINSKARDY---  225 (299)
Q Consensus       165 --------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~----~~----~~~~~~~~~~---  225 (299)
                              .....|+.||.+.+.+++.+++.+    |+++..+.|..+..+......    ..    ..+.......   
T Consensus       135 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  210 (342)
T d2blla1         135 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI  210 (342)
T ss_dssp             CCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCE
T ss_pred             cccccccCCCcchhhhcccchhhhhhhhhccc----CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCc
Confidence                    124679999999999999988776    588888888766544222211    11    1111222111   


Q ss_pred             ------CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCc
Q 022335          226 ------MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       226 ------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                            ...+.+...+|+++++..++........|+.+++..|
T Consensus       211 ~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         211 KLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             EEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             cccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence                  2223467899999999999876555566899998543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=3e-15  Score=130.83  Aligned_cols=226  Identities=15%  Similarity=-0.001  Sum_probs=155.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK----QVLDAAVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~----~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +-|++|||||+|.||.+++++|.++|++|+++++..    ...+....... ....++.++.+|+.+.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            468999999999999999999999999999998632    22222222111 112468999999999988666544    


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc----
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----  163 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~----  163 (299)
                         ..+.++|.++....    ....++....+++|+.|+.++++++...    +       ..++|++||...+..    
T Consensus        91 ---~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-------~~~~i~~SS~~vyg~~~~~  152 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARDA----K-------VQSFTYAASSSTYGDHPGL  152 (341)
T ss_dssp             ---TCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-------CSEEEEEEEGGGGTTCCCS
T ss_pred             ---cccccccccccccc----cccccCccchhheeehhHHHHHHHHHhc----C-------CceEEEcccceeeCCCCCC
Confidence               77888988875421    1134556778999999999998877532    2       358999999775432    


Q ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc----hHHhHHHHhcC------
Q 022335          164 -------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----DEINSKARDYM------  226 (299)
Q Consensus       164 -------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~----~~~~~~~~~~~------  226 (299)
                             ......|+.+|.+.+.+++.++..+    ++++..++|+.+.++........    ...........      
T Consensus       153 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g  228 (341)
T d1sb8a_         153 PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYING  228 (341)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CccCCCCCCCCCcchHHHHHHHHHHHHHHHHh----CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcC
Confidence                   1234789999999999999988765    58889999987765543322211    12222222222      


Q ss_pred             ---CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 ---PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 ---~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                         ..+.+...+|++.++..++.... ...|+.+++..+...
T Consensus       229 ~g~~~r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~  269 (341)
T d1sb8a_         229 DGETSRDFCYIENTVQANLLAATAGL-DARNQVYNIAVGGRT  269 (341)
T ss_dssp             SSCCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCCE
T ss_pred             CCCEEEEEEEEeccchhhhhhhhccc-cccceeeeecccccc
Confidence               22346778999999888775432 246777777665543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=7.4e-16  Score=133.42  Aligned_cols=223  Identities=14%  Similarity=0.053  Sum_probs=147.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLD-AAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |+||||||+|.||++++++|.++|++|+.++|..+... ...+.+ ....++.++.+|+++.+++.+.+...     ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHh-cccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            68999999999999999999999999999998653211 111111 12346999999999999999888865     678


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----------  162 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----------  162 (299)
                      +++++++......    ..++....+..|+.++.+++.++...-.          ..+|++.|+..-..           
T Consensus        75 ~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~~~----------~~~~i~~Ss~~~~~~~~~~~~~E~~  140 (321)
T d1rpna_          75 EVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQFSP----------ETRFYQASTSEMFGLIQAERQDENT  140 (321)
T ss_dssp             EEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHHCT----------TSEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             ccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHhCC----------CcccccccchhhcCcccCCCCCCCC
Confidence            8888887543211    1123457789999999999887754311          24566666644321           


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHH----hHHHHhcC---------CCC
Q 022335          163 ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEI----NSKARDYM---------PLY  229 (299)
Q Consensus       163 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~----~~~~~~~~---------~~~  229 (299)
                      +......|+.+|.+.+.+++.++.++    ++++.++.|+.+..+...........    ........         ..+
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r  216 (321)
T d1rpna_         141 PFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR  216 (321)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEE
T ss_pred             CccccChhHHHHHHHHHHHHHHHhhc----CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEE
Confidence            11245789999999999999888776    58888888877755432222111111    11111111         112


Q ss_pred             CCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          230 KLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       230 ~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      .+...+|+|+++..++....    +..+++.++...
T Consensus       217 ~~i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~~  248 (321)
T d1rpna_         217 DWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTT  248 (321)
T ss_dssp             ECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             ccEEeHHHHHHHHHHHhcCC----cCCceecccccc
Confidence            36789999999999885432    344566655444

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.65  E-value=6.9e-16  Score=135.27  Aligned_cols=220  Identities=17%  Similarity=0.103  Sum_probs=142.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      -|.||||||+|.||.+++++|.++|+.|.++.++...-......+.. .+.++.++.+|+++.+.+..++.       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            36799999999999999999999998755544321000000000111 24579999999999999888765       68


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc---------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA---------  163 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~---------  163 (299)
                      |.++|.|+......    ...+..+.+++|+.++.+++......            +.++|++||...+..         
T Consensus        75 ~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~~~~------------~~k~i~~ss~~vyg~~~~~~~~~~  138 (346)
T d1oc2a_          75 DAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAARKY------------DIRFHHVSTDEVYGDLPLREDLPG  138 (346)
T ss_dssp             SEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHHH------------TCEEEEEEEGGGGCCBCCGGGSTT
T ss_pred             hhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhhccc------------cccccccccceEecccCccccccc
Confidence            88999988653211    11233567899999999998776543            356788877654321         


Q ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhc----
Q 022335          164 --------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDY----  225 (299)
Q Consensus       164 --------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~----  225 (299)
                                    ......|+.+|.+.+.+++.+..++    |+++.++.|+.+..+..................    
T Consensus       139 ~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~  214 (346)
T d1oc2a_         139 HGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPK  214 (346)
T ss_dssp             TTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCE
T ss_pred             cccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc----CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCcee
Confidence                          1123569999999999999888765    699999999988764322111111222212221    


Q ss_pred             -----CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcc
Q 022335          226 -----MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       226 -----~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  263 (299)
                           ...+.+...+|++++++.+....   ..|..+++-++.
T Consensus       215 i~~~g~~~r~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~~  254 (346)
T d1oc2a_         215 LYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADG  254 (346)
T ss_dssp             EETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSC
T ss_pred             EeCCCCccccccchhhHHHHHHHHHhhc---ccCccccccccc
Confidence                 22234678899999988776432   234444444443

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.64  E-value=7.6e-15  Score=127.45  Aligned_cols=223  Identities=13%  Similarity=0.107  Sum_probs=142.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRK-QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +||||||+|.||.+++++|.++|++|+++++-. .........+. ...++.++.+|+++.+++.++++..     ++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence            589999999999999999999999999987422 11122222232 2457899999999999999988866     7999


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC----------
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS----------  164 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~----------  164 (299)
                      |||+|+.....    ...++....+++|+.|+.++++++...    +       ..+.|+.||.....+.          
T Consensus        76 Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~----~-------~~~~i~~sS~~~~~~~~~~~~~~~~~  140 (338)
T d1orra_          76 CFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQY----N-------SNCNIIYSSTNKVYGDLEQYKYNETE  140 (338)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH----C-------TTCEEEEEEEGGGGTTCTTSCEEECS
T ss_pred             EEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhcc----c-------cccccccccccccccccccccccccc
Confidence            99999865321    122334678899999999998876543    2       2345555554432211          


Q ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCC---chHHhHHHH
Q 022335          165 ------------------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLA---PDEINSKAR  223 (299)
Q Consensus       165 ------------------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~---~~~~~~~~~  223 (299)
                                        .....|+.+|...+.+.......+.    +....+.|..+..+.......   ...+.....
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (338)
T d1orra_         141 TRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG----LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAV  216 (338)
T ss_dssp             SCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHH
T ss_pred             ccccccccccCcccCCccccccccccccchhhhhhhhhhhccC----cccccccccceeeccccccccccccchhhHHHH
Confidence                              2357899999999999998888774    333333332221111111111   111211111


Q ss_pred             h--------------cCCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccc
Q 022335          224 D--------------YMPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLW  264 (299)
Q Consensus       224 ~--------------~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  264 (299)
                      .              ....+.+...+|++++++.++... ....|+.+++.+|..
T Consensus       217 ~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~~  270 (338)
T d1orra_         217 EIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTIV  270 (338)
T ss_dssp             HHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCGG
T ss_pred             HHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccccc
Confidence            1              011123566899999998877432 236788888866543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=4e-15  Score=130.23  Aligned_cols=228  Identities=12%  Similarity=0.026  Sum_probs=151.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC------hhHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRR------KQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~------~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      |+||||||+|.||.+++++|+++|+.|+++++.      ........+.+.. ...++.++.+|++|.+.+++++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY--   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc--
Confidence            678999999999999999999999999998741      1111111121211 2457899999999999999887753  


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---  164 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---  164 (299)
                         .+++++|.|+.....    ...++..+.+++|+.++.++++++..    .+       -.++|++||.......   
T Consensus        81 ---~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~-------v~~~i~~ss~~~~~~~~~~  142 (346)
T d1ek6a_          81 ---SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-------VKNLVFSSSATVYGNPQYL  142 (346)
T ss_dssp             ---CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-------CCEEEEEEEGGGGCSCSSS
T ss_pred             ---ccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhh----cC-------cccccccccceeeeccccc
Confidence               788999999865321    12233457789999999998877642    22       3578998886544221   


Q ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC------CCCchHHh----HHHHh-
Q 022335          165 ---------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN------KLAPDEIN----SKARD-  224 (299)
Q Consensus       165 ---------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~------~~~~~~~~----~~~~~-  224 (299)
                               .....|+.+|.+.+...+.++...   .++....+.|+.+..+....      ........    ..... 
T Consensus       143 ~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (346)
T d1ek6a_         143 PLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD---KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGR  219 (346)
T ss_dssp             SBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC---TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTS
T ss_pred             cccccccccccCChHHHHHHHHHHHHHHHHHhc---cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcC
Confidence                     234579999999999988876643   37888888887664332111      01111111    11111 


Q ss_pred             cC---------------CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          225 YM---------------PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       225 ~~---------------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..               ..+.+...+|+|.++..+.........++.+++.++...
T Consensus       220 ~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         220 REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             CCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence            11               112368899999998877654445567788888877664

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=4.7e-15  Score=128.12  Aligned_cols=213  Identities=12%  Similarity=0.004  Sum_probs=142.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ-VLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      |+||||||+|.||++++++|.++|++|+++++... ..+.+ ... ....++.....|+.+.            .+.++|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~-~~~~~~d~~~~~~~~~------------~~~~~d   67 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHW-IGHENFELINHDVVEP------------LYIEVD   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGG-TTCTTEEEEECCTTSC------------CCCCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHh-cCCCceEEEehHHHHH------------HHcCCC
Confidence            78999999999999999999999999999986322 11111 111 1123466666666432            123799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----------  162 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----------  162 (299)
                      +|||+|+........    ++..+.+++|+.++.++++++...            +.++|++||...+.           
T Consensus        68 ~VihlAa~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~~~~~------------~~k~I~~SS~~vy~~~~~~~~~e~~  131 (312)
T d2b69a1          68 QIYHLASPASPPNYM----YNPIKTLKTNTIGTLNMLGLAKRV------------GARLLLASTSEVYGDPEVHPQSEDY  131 (312)
T ss_dssp             EEEECCSCCSHHHHT----TCHHHHHHHHHHHHHHHHHHHHHH------------TCEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             EEEECcccCCchhHH----hCHHHHHHHHHHHHHHHHHHHHHc------------CCcEEEEEChheecCCCCCCCCccc
Confidence            999999865422111    234567899999999998876432            34799999965442           


Q ss_pred             -----cCCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc--hHHhHHHHhcC---------
Q 022335          163 -----ASWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP--DEINSKARDYM---------  226 (299)
Q Consensus       163 -----~~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~--~~~~~~~~~~~---------  226 (299)
                           +......|+.||.+.+.+++..+.++    |+++..++|+.+..+........  ..........-         
T Consensus       132 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~  207 (312)
T d2b69a1         132 WGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS  207 (312)
T ss_dssp             CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC
T ss_pred             cCCCCCCCCccHHHHHHHHHHHHHHHHHHHh----CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCC
Confidence                 12245779999999999999988776    69999999999976543322211  12222222221         


Q ss_pred             CCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          227 PLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       227 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      ..+.+...+|+++++..++...    .+..+++.+|...
T Consensus       208 ~~r~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         208 QTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             eeEccEEHHHHHHHHHHHHhhc----cCCceEecCCccc
Confidence            2234567899999998887432    3456777766555

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=6.3e-15  Score=129.82  Aligned_cols=218  Identities=17%  Similarity=0.045  Sum_probs=149.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++++||||||+|.||.+++++|.++|++|+++++.....      .........+..+|+.+.+.+.++++       ++
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVTE-------GV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHhh-------cC
Confidence            366799999999999999999999999999998754320      00111345778899999988777654       78


Q ss_pred             cEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC--------
Q 022335           93 DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS--------  164 (299)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~--------  164 (299)
                      |.+||.|+.......   ..+.....+.+|+.++.+++.++...    +       -.++|++||.......        
T Consensus        81 d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~~~~----~-------vk~~i~~SS~~~~~~~~~~~~~~~  146 (363)
T d2c5aa1          81 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARIN----G-------IKRFFYASSACIYPEFKQLETTNV  146 (363)
T ss_dssp             SEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHHT----T-------CSEEEEEEEGGGSCGGGSSSSSSC
T ss_pred             CeEeecccccccccc---cccccccccccccchhhHHHHhHHhh----C-------cccccccccccccccccccccccc
Confidence            999999986543211   12334567889999998888876542    2       3579999997664321        


Q ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc-----hHHhHHHHhc----
Q 022335          165 ----------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP-----DEINSKARDY----  225 (299)
Q Consensus       165 ----------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~-----~~~~~~~~~~----  225 (299)
                                .....|+.+|.+.+.+++.++.++    |+++..++|+.+..+........     ..........    
T Consensus       147 ~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (363)
T d2c5aa1         147 SLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE  222 (363)
T ss_dssp             EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEE
T ss_pred             ccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEeccCCccccccccccccccccccccccccc
Confidence                      124579999999999999888765    69999999988865533222111     1111111111    


Q ss_pred             -----CCCCCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          226 -----MPLYKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       226 -----~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                           ...+.+...+|++.++..++...    .|..+++.+|..+
T Consensus       223 ~~g~g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         223 MWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             EESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             ccCCCCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence                 12334778999999998887432    4567777766544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.60  E-value=3.3e-15  Score=129.54  Aligned_cols=220  Identities=18%  Similarity=0.128  Sum_probs=150.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEE------EeCCh--hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAI------MGRRK--QVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~------~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +||||||+|.||.+++++|+++|+.|..      ++...  ...... ..+ ....++.++..|+++.........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~~d~~~~~~~~~~~~----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APV-DADPRLRFVHGDIRDAGLLARELR----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGG-TTCTTEEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh-hhh-hcCCCeEEEEeccccchhhhcccc----
Confidence            5999999999999999999999986543      33211  000010 111 224579999999999988775443    


Q ss_pred             HcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---
Q 022335           88 HFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---  164 (299)
Q Consensus        88 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---  164 (299)
                         .+|.++|.|+....    ........+.+++|+.++.++++++..    .+       ..++|++||...+.+.   
T Consensus        76 ---~~d~vi~~a~~~~~----~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~-------~~~~I~~Ss~~~yg~~~~~  137 (322)
T d1r6da_          76 ---GVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVD----AG-------VGRVVHVSTNQVYGSIDSG  137 (322)
T ss_dssp             ---TCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHH----TT-------CCEEEEEEEGGGGCCCSSS
T ss_pred             ---ccceEEeecccccc----cccccchHHHhhhhHHHHHHHHHHHHH----cC-------CceEEEeecceeecCCCCC
Confidence               78999999986432    112334566789999999999888753    22       3679999998765332   


Q ss_pred             --------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC--------
Q 022335          165 --------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL--------  228 (299)
Q Consensus       165 --------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------  228 (299)
                              .....|+.+|.+.+.+++.+++++    |+++..++|+.+..+.......-..+.......-++        
T Consensus       138 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~  213 (322)
T d1r6da_         138 SWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGAN  213 (322)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCe
Confidence                    234579999999999999998775    699999999988765332221122222322222221        


Q ss_pred             -CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCccccC
Q 022335          229 -YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWLS  266 (299)
Q Consensus       229 -~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  266 (299)
                       +.+...+|+|+++..++....   .|+.+++..|....
T Consensus       214 ~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s  249 (322)
T d1r6da_         214 VREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLELT  249 (322)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred             EEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccch
Confidence             135688999999999886433   57888887776553

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=1.6e-14  Score=124.53  Aligned_cols=190  Identities=14%  Similarity=0.089  Sum_probs=134.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .|+||||||+|.||.+++++|+++|+.|+++++..                    .+|+++.+.+++++..-     .+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~~d   56 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RID   56 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhhc-----CCC
Confidence            57899999999999999999999999988776543                    26999999999887643     799


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC---------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS---------  164 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~---------  164 (299)
                      .++|+|+.....   .....+..+.+++|+.++.++++++...    +       -.++|++||...+.+.         
T Consensus        57 ~v~~~a~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~-------v~~~i~~SS~~vyg~~~~~~~~E~~  122 (315)
T d1e6ua_          57 QVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQN----D-------VNKLLFLGSSCIYPKLAKQPMAESE  122 (315)
T ss_dssp             EEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-------CCEEEEECCGGGSCTTCCSSBCGGG
T ss_pred             EEEEcchhcccc---ccchhhHHHHHHHHHHHHHHHHHHHHHc----C-------CCEEEEECCceEcCCCCCCCccCCc
Confidence            999998754321   1122334556889999999998877542    2       3579999998765321         


Q ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCc----h-HHh----HHHHh----
Q 022335          165 -------WYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAP----D-EIN----SKARD----  224 (299)
Q Consensus       165 -------~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~----~-~~~----~~~~~----  224 (299)
                             +....|+.||.+.+.+++.+..++    |+++.++.|+.+..+........    . ...    .....    
T Consensus       123 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (315)
T d1e6ua_         123 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDV  198 (315)
T ss_dssp             TTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEE
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCce
Confidence                   123579999999999999998765    69999999988876533222111    0 110    11111    


Q ss_pred             -----cCCCCCCCCHHHHHHHHHHHcC
Q 022335          225 -----YMPLYKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       225 -----~~~~~~~~~~~dva~~~~~l~s  246 (299)
                           ..+...+...+|++.++..+..
T Consensus       199 ~~~g~g~~~~~~~~v~d~~~~~~~~~~  225 (315)
T d1e6ua_         199 VVWGSGTPMREFLHVDDMAAASIHVME  225 (315)
T ss_dssp             EEESCSCCEECEEEHHHHHHHHHHHHH
T ss_pred             EEcCCCceEEEEEEeehhHHHHHHhhh
Confidence                 1233455678899999888763

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.58  E-value=5.3e-14  Score=123.21  Aligned_cols=215  Identities=15%  Similarity=0.098  Sum_probs=147.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++||+||||||+|.||.++++.|.++|++|++++|+......+.+.. .....+.++.+|+++++.+.+++...     .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~   79 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF-----Q   79 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc-----h
Confidence            68999999999999999999999999999999999876544443333 22346999999999999999988865     8


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc---------
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT---------  162 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~---------  162 (299)
                      +|+++|.++....    ....+.....+++|+.++.++++++...-   .       ...+++.|+.....         
T Consensus        80 ~~~v~~~aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~---~-------~~~~~~~s~~~~~~~~~~~~~~~  145 (356)
T d1rkxa_          80 PEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHVG---G-------VKAVVNITSDKCYDNKEWIWGYR  145 (356)
T ss_dssp             CSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHHC---C-------CCEEEEECCGGGBCCCCSSSCBC
T ss_pred             hhhhhhhhccccc----cccccCCccccccccccchhhhhhhhccc---c-------ccccccccccccccccccccccc
Confidence            8999999985432    11234456788999999999988876431   1       23455555443322         


Q ss_pred             ---cCCCchHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEeCCccCCCCCCCCC-CchHHhHHHHhcCCC-----
Q 022335          163 ---ASWYQIHVAAAKAAVDAITRNLALEWGA-----DYDIRVNGIAPGPIGDTPGMNKL-APDEINSKARDYMPL-----  228 (299)
Q Consensus       163 ---~~~~~~~Y~~sKaal~~l~~~la~e~~~-----~~gi~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~-----  228 (299)
                         +......|+.+|.+.+.+.+..+.++..     .+++.+..+.|+.+..+...... .............+.     
T Consensus       146 ~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~  225 (356)
T d1rkxa_         146 ENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNP  225 (356)
T ss_dssp             TTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCT
T ss_pred             cccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeec
Confidence               1123457999999999999988887631     23688999999877654321111 111222222222211     


Q ss_pred             ---CCCCCHHHHHHHHHHHcC
Q 022335          229 ---YKLGEKWDIAMAALYLTS  246 (299)
Q Consensus       229 ---~~~~~~~dva~~~~~l~s  246 (299)
                         ..+...+|++.++..++.
T Consensus       226 ~~~~~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         226 HAIRPWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             TCEECCEETHHHHHHHHHHHH
T ss_pred             cccccccccccccchhhhhhh
Confidence               224567899998777663

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.57  E-value=1.9e-13  Score=121.07  Aligned_cols=172  Identities=17%  Similarity=0.124  Sum_probs=123.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeC---------ChhHHHHHHHHHHhc--------CCcEEEEEcCCCCH
Q 022335           14 GKVALITGGGSGIGFEISTQFGK-HGASVAIMGR---------RKQVLDAAVSALRSL--------GIKAVGFEGDVRRQ   75 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r---------~~~~~~~~~~~~~~~--------~~~v~~~~~Dl~~~   75 (299)
                      +++||||||+|.||.+++++|++ .|++|+++|+         ..+..+.....+...        ..++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 6999999874         112223333333221        23588999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEe
Q 022335           76 EHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNI  155 (299)
Q Consensus        76 ~~v~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~v  155 (299)
                      +.++++++.    +.++|+|+|.|+.....    ...+.....+++|+.++..++.++...    +       ..+++++
T Consensus        82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~~----~-------~~~~~~~  142 (383)
T d1gy8a_          82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLLH----K-------CDKIIFS  142 (383)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-------CCEEEEE
T ss_pred             HHhhhhhhc----cceeehhhccccccccc----ccccccccccccccccccccchhhhcc----C-------Ccccccc
Confidence            998887764    45789999999865421    122334567889999999998777632    2       3467777


Q ss_pred             cccccccc------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCC
Q 022335          156 SATLHYTA------------------SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTP  208 (299)
Q Consensus       156 sS~~~~~~------------------~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~  208 (299)
                      ++......                  ......|+.+|.+.+.+++.+...+    |+.+.+++|+.+..+.
T Consensus       143 ~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         143 SSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNACGAH  209 (383)
T ss_dssp             EEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECCC
T ss_pred             cccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh----CCCEEEEecceeeccC
Confidence            66554321                  1235779999999999999888765    6899999988775543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=2.1e-14  Score=118.36  Aligned_cols=216  Identities=12%  Similarity=0.025  Sum_probs=134.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCe--EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGAS--VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      ++||||||+|.||+++++.|+++|++  |+.+.|+++..+       ....+++++.+|+++.++..++++       ++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc-------cc
Confidence            58999999999999999999999976  555678775433       234568889999999999887765       78


Q ss_pred             cEEEEcCCCCCCCC---------CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc
Q 022335           93 DILVNAAAGNFLVS---------AEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA  163 (299)
Q Consensus        93 d~lv~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~  163 (299)
                      |.+||+++......         ........+.....+|+.++..+........           .+...+.++.....+
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~~~  138 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-----------VKHIVVVGSMGGTNP  138 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-----------CSEEEEEEETTTTCT
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-----------ccccccccccccCCC
Confidence            99999998543211         0111112344556788888888766654432           467788777666554


Q ss_pred             CCCchHHHHHHHH-HHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCCCCCCCHHHHHHHHH
Q 022335          164 SWYQIHVAAAKAA-VDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPLYKLGEKWDIAMAAL  242 (299)
Q Consensus       164 ~~~~~~Y~~sKaa-l~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  242 (299)
                      ......+..++.. ...+...+..    ..|+++.+++||.+.++...............  ......+.+.+|+|++++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~a~~  212 (252)
T d2q46a1         139 DHPLNKLGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVRELLVGKDDEL--LQTDTKTVPRADVAEVCI  212 (252)
T ss_dssp             TCGGGGGGGCCHHHHHHHHHHHHH----HSSSCEEEEEECEEECSCTTSSCEEEESTTGG--GGSSCCEEEHHHHHHHHH
T ss_pred             Ccccccccccchhhhhhhhhhhhh----cccccceeecceEEECCCcchhhhhhccCccc--ccCCCCeEEHHHHHHHHH
Confidence            4333222222211 1122222222    34799999999988655322111000000000  011223567899999999


Q ss_pred             HHcCCCCCCccCcEEEeCCcc
Q 022335          243 YLTSDTGKYVNGTTLIVDGGL  263 (299)
Q Consensus       243 ~l~s~~~~~~~G~~i~~dgg~  263 (299)
                      ..+...  ...|+.+++-++-
T Consensus       213 ~~l~~~--~~~g~~~~i~~~~  231 (252)
T d2q46a1         213 QALLFE--EAKNKAFDLGSKP  231 (252)
T ss_dssp             HHTTCG--GGTTEEEEEEECC
T ss_pred             HHhCCc--cccCcEEEEeeCC
Confidence            888543  3578898886553

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=8.1e-14  Score=115.14  Aligned_cols=196  Identities=16%  Similarity=0.115  Sum_probs=130.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|++|+||||||+|.||++++++|.++|.  +|++++|++.....      ....++....+|+.+.+++...       
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~-------   77 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASA-------   77 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGG-------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeeccccccccccc-------
Confidence            46789999999999999999999999995  79999997643211      1123577777898877665443       


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      +.+.|+++|++|...       ..........+|+.++..+++.+.    +.+       -.++|++|+.......  ..
T Consensus        78 ~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~----~~~-------v~~fi~~Ss~~~~~~~--~~  137 (232)
T d2bkaa1          78 FQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGG-------CKHFNLLSSKGADKSS--NF  137 (232)
T ss_dssp             GSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTT-------CCEEEEECCTTCCTTC--SS
T ss_pred             ccccccccccccccc-------cccchhhhhhhcccccceeeeccc----ccC-------ccccccCCccccccCc--cc
Confidence            447999999998431       223445667889998888877764    232       3579999998766443  35


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC----CCCCCHHHHHHHHHH
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDI-RVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL----YKLGEKWDIAMAALY  243 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~  243 (299)
                      .|+.+|...+...+    ++    |. ++..++||.+..+..... ..+..........+.    ....+.+|+|++++.
T Consensus       138 ~Y~~~K~~~E~~l~----~~----~~~~~~IlRP~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~  208 (232)
T d2bkaa1         138 LYLQVKGEVEAKVE----EL----KFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN  208 (232)
T ss_dssp             HHHHHHHHHHHHHH----TT----CCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred             hhHHHHHHhhhccc----cc----cccceEEecCceeecCCCcCc-HHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHH
Confidence            68999987665442    22    33 577889999965432211 111222222222222    123567999999887


Q ss_pred             HcCCC
Q 022335          244 LTSDT  248 (299)
Q Consensus       244 l~s~~  248 (299)
                      .+...
T Consensus       209 ~~~~~  213 (232)
T d2bkaa1         209 NVVRP  213 (232)
T ss_dssp             HHTSC
T ss_pred             HHhcC
Confidence            76443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.20  E-value=9.1e-11  Score=99.19  Aligned_cols=194  Identities=13%  Similarity=0.056  Sum_probs=112.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH--HHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA--AVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~--~~~~~~~-~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|+||||||+|.||++++++|.++|++|++++|+......  ....+.. ....+.++.+|+.+.+...+.++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            5679999999999999999999999999999997543211  1122222 13458889999999998887776       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHH
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHV  170 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y  170 (299)
                      ..+.++++++....                   .+...+.++    +....       ...+++.||............+
T Consensus        76 ~~~~vi~~~~~~~~-------------------~~~~~~~~a----~~~~~-------~~~~~~~s~~~~~~~~~~~~~~  125 (307)
T d1qyca_          76 NVDVVISTVGSLQI-------------------ESQVNIIKA----IKEVG-------TVKRFFPSEFGNDVDNVHAVEP  125 (307)
T ss_dssp             TCSEEEECCCGGGS-------------------GGGHHHHHH----HHHHC-------CCSEEECSCCSSCTTSCCCCTT
T ss_pred             hceeeeeccccccc-------------------chhhHHHHH----HHHhc-------cccceeeecccccccccccccc
Confidence            67899998874321                   112222222    22322       3457777775544333333333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCC--C----CCchHHhHHHHhcCCCCCCCCHHHHHHHHHHH
Q 022335          171 AAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMN--K----LAPDEINSKARDYMPLYKLGEKWDIAMAALYL  244 (299)
Q Consensus       171 ~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  244 (299)
                      ...+............+    .|+....+.|+.+..+....  .    ..................+...+|+|++++.+
T Consensus       126 ~~~~~~~~~~~~~~~~~----~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (307)
T d1qyca_         126 AKSVFEVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA  201 (307)
T ss_dssp             HHHHHHHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             ccccccccccccchhhc----cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHH
Confidence            33333333333333333    36777888887664321110  0    00000000111112223468899999999998


Q ss_pred             cCCC
Q 022335          245 TSDT  248 (299)
Q Consensus       245 ~s~~  248 (299)
                      +...
T Consensus       202 l~~~  205 (307)
T d1qyca_         202 VDDP  205 (307)
T ss_dssp             SSCG
T ss_pred             hcCh
Confidence            8643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.19  E-value=1.4e-11  Score=99.81  Aligned_cols=189  Identities=15%  Similarity=0.099  Sum_probs=113.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|++|||||+|.||++++++|.++|+  +|+...|++..          ...+   +..+..+..++..      ...+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~---~~~~~~d~~~~~~------~~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---LDNPVGPLAELLP------QLDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---EECCBSCHHHHGG------GCCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccc---ccccccchhhhhh------ccccc
Confidence            37899999999999999999999998  56666665421          1112   3344444443222      22357


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCchHHH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQIHVA  171 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~~Y~  171 (299)
                      +|.+|+++|.....      ...-.....+|+.++..+++++    ++.+       -.+++++||..+....  ...|.
T Consensus        63 ~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~-------v~~~i~~Ss~~~~~~~--~~~y~  123 (212)
T d2a35a1          63 IDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMG-------ARHYLVVSALGADAKS--SIFYN  123 (212)
T ss_dssp             CSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTT-------CCEEEEECCTTCCTTC--SSHHH
T ss_pred             hheeeeeeeeeccc------cccccccccchhhhhhhccccc----cccc-------cccccccccccccccc--ccchh
Confidence            89999999854211      1112456788888888887765    3333       4689999997765433  45688


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCccCCCCCCCCCCchHHhHHHHhcCCC-CCCCCHHHHHHHHHHHcCCCC
Q 022335          172 AAKAAVDAITRNLALEWGADYDI-RVNGIAPGPIGDTPGMNKLAPDEINSKARDYMPL-YKLGEKWDIAMAALYLTSDTG  249 (299)
Q Consensus       172 ~sKaal~~l~~~la~e~~~~~gi-~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~  249 (299)
                      .+|...+...+        ..+. +...++|+.+..+...... ............+. ......+|+|++++.++....
T Consensus       124 ~~K~~~E~~l~--------~~~~~~~~I~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         124 RVKGELEQALQ--------EQGWPQLTIARPSLLFGPREEFRL-AEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHHHHHHHHT--------TSCCSEEEEEECCSEESTTSCEEG-GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHhhhcc--------ccccccceeeCCcceeCCcccccH-HHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            99976654432        2243 6788999988644211100 00000000000000 012567899999999886543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.18  E-value=6.7e-11  Score=100.66  Aligned_cols=208  Identities=15%  Similarity=0.033  Sum_probs=117.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH-HHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA-AVSALR-SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~-~~~~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .++||||||+|.||++++++|.++|++|+++.|+...... ..+.+. ....++.++.+|+++.+++.+.+.       +
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            3459999999999999999999999999999997532111 111111 123468899999999999877765       6


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc-----CCC
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA-----SWY  166 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~-----~~~  166 (299)
                      .+.++++++.....               .|..+...++.++    .+..       ..++++.||......     ...
T Consensus        76 ~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~-------~~~~v~~Ss~g~~~~~~~~~~~~  129 (312)
T d1qyda_          76 VDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAG-------NIKRFLPSEFGMDPDIMEHALQP  129 (312)
T ss_dssp             CSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSC-------CCSEEECSCCSSCTTSCCCCCSS
T ss_pred             cchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhc-------CCcEEEEeeccccCCCcccccch
Confidence            78899988743321               1222223333332    2322       356777776543321     223


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCC-------CCCCchHHhHHHHhcCCCCCCCCHHHHHH
Q 022335          167 QIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGM-------NKLAPDEINSKARDYMPLYKLGEKWDIAM  239 (299)
Q Consensus       167 ~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~dva~  239 (299)
                      ...|..+|.....    ...    ..++....++|+.+......       ...........+........+...+|+|+
T Consensus       130 ~~~~~~~~~~~~~----~~~----~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~  201 (312)
T d1qyda_         130 GSITFIDKRKVRR----AIE----AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT  201 (312)
T ss_dssp             TTHHHHHHHHHHH----HHH----HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred             hhhhhHHHHHHHH----hhc----ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHH
Confidence            3455555544433    222    33677788888766321100       00000010001111112233688999999


Q ss_pred             HHHHHcCCCCCCccCcE-EEeCCccc
Q 022335          240 AALYLTSDTGKYVNGTT-LIVDGGLW  264 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~-i~~dgg~~  264 (299)
                      +++.++....  ..|+. .+..++..
T Consensus       202 a~~~~l~~~~--~~~~~~~~~~~~~~  225 (312)
T d1qyda_         202 YTIKSIDDPQ--TLNKTMYIRPPMNI  225 (312)
T ss_dssp             HHHHHTTCGG--GSSSEEECCCGGGE
T ss_pred             HHHHHhcCcc--ccCceEEEeCCCcC
Confidence            9998885432  34444 34444443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.16  E-value=1.4e-10  Score=97.48  Aligned_cols=194  Identities=15%  Similarity=0.140  Sum_probs=125.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      +++|||||+|.||.+++++|.++|++|+.++|++                     +|+++.++++++++..     ++|+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            3599999999999999999999999999999863                     4999999999988865     7899


Q ss_pred             EEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccc-----------c
Q 022335           95 LVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYT-----------A  163 (299)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~-----------~  163 (299)
                      |||+++.....    ......+..+..|......+.......            ...+++.||.....           +
T Consensus        56 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~------------~~~~~~~ss~~v~~~~~~~~~~e~~~  119 (281)
T d1vl0a_          56 VINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYSV------------GAEIVQISTDYVFDGEAKEPITEFDE  119 (281)
T ss_dssp             EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH------------TCEEEEEEEGGGSCSCCSSCBCTTSC
T ss_pred             EEeeccccccc----cccccchhhcccccccccccccccccc------------cccccccccceeeecccccccccccc
Confidence            99998854321    112223456677777776665554432            24566666643321           2


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCCCCchHHhHHHHhcC-------CCCCCCCHHH
Q 022335          164 SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNKLAPDEINSKARDYM-------PLYKLGEKWD  236 (299)
Q Consensus       164 ~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~d  236 (299)
                      ......|+.+|...+.+.+    ++    +.+...+.|+.+..+..  .. ............       ..+.+...+|
T Consensus       120 ~~~~~~~~~~k~~~e~~~~----~~----~~~~~i~R~~~vyG~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  188 (281)
T d1vl0a_         120 VNPQSAYGKTKLEGENFVK----AL----NPKYYIVRTAWLYGDGN--NF-VKTMINLGKTHDELKVVHDQVGTPTSTVD  188 (281)
T ss_dssp             CCCCSHHHHHHHHHHHHHH----HH----CSSEEEEEECSEESSSS--CH-HHHHHHHHHHCSEEEEESSCEECCEEHHH
T ss_pred             ccchhhhhhhhhHHHHHHH----Hh----CCCccccceeEEeCCCc--cc-ccchhhhhccCCceeecCCceeccchhhh
Confidence            2345679999877765543    22    45677899998865421  11 111222222211       1124678999


Q ss_pred             HHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          237 IAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       237 va~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +++++..++...   .+| .+++.++..+
T Consensus       189 ~~~~~~~~~~~~---~~g-~~~~~~~~~~  213 (281)
T d1vl0a_         189 LARVVLKVIDEK---NYG-TFHCTCKGIC  213 (281)
T ss_dssp             HHHHHHHHHHHT---CCE-EEECCCBSCE
T ss_pred             hhhhhhhhhhhc---ccC-ceeEeCCCcc
Confidence            999999988543   234 4555554433

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.09  E-value=1.6e-10  Score=97.61  Aligned_cols=128  Identities=17%  Similarity=0.216  Sum_probs=91.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      ++|||||+|.||.+++++|.++|+ ++.++++...                 +..|+++.+.++++++..     ++|+|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~V   58 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVI   58 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence            599999999999999999999886 5555554321                 357999999999988865     79999


Q ss_pred             EEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC-----------
Q 022335           96 VNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS-----------  164 (299)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~-----------  164 (299)
                      ||+||........    +.-...+++|+.+...+..+...    .        +.+++++||.....+.           
T Consensus        59 ih~Aa~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~--------~~~~~~~ss~~~~~~~~~~~~~E~~~~  122 (298)
T d1n2sa_          59 VNAAAHTAVDKAE----SEPELAQLLNATSVEAIAKAANE----T--------GAWVVHYSTDYVFPGTGDIPWQETDAT  122 (298)
T ss_dssp             EECCCCCCHHHHT----TCHHHHHHHHTHHHHHHHHHHTT----T--------TCEEEEEEEGGGSCCCTTCCBCTTSCC
T ss_pred             EEecccccccccc----cCccccccccccccccchhhhhc----c--------ccccccccccccccCCCCCCCcccccc
Confidence            9999976432111    12245778899998888777632    1        4678888776543221           


Q ss_pred             CCchHHHHHHHHHHHHHH
Q 022335          165 WYQIHVAAAKAAVDAITR  182 (299)
Q Consensus       165 ~~~~~Y~~sKaal~~l~~  182 (299)
                      .....|+.+|.+.+.+.+
T Consensus       123 ~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         123 SPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             CCSSHHHHHHHHHHHHHH
T ss_pred             CCCchHhhhhhhhhhhHH
Confidence            234679999987766543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.09  E-value=7.7e-10  Score=96.12  Aligned_cols=205  Identities=14%  Similarity=0.076  Sum_probs=117.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHH-HHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHA-KKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v-~~~~~~~~~~~g~   91 (299)
                      +.|+|+||||+|.||.+++++|.++|++|+++.|+.+....  ..+. ...++.++.+|+++..+. +.+       +..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~v~~~~gD~~d~~~~~~~a-------~~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPNVTLFQGPLLNNVPLMDTL-------FEG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTTEEEEESCCTTCHHHHHHH-------HTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCCCEEEEeeCCCcHHHHHHH-------hcC
Confidence            47899999999999999999999999999999998765332  2222 234688999999986553 333       347


Q ss_pred             ccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccC--CCchH
Q 022335           92 LDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTAS--WYQIH  169 (299)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~--~~~~~  169 (299)
                      .|.++++......                .++....+++.++    .+.+       ..++++.||.......  .....
T Consensus        72 ~~~~~~~~~~~~~----------------~~~~~~~~~~~aa----~~ag-------v~~~v~~Ss~~~~~~~~~~~~~~  124 (350)
T d1xgka_          72 AHLAFINTTSQAG----------------DEIAIGKDLADAA----KRAG-------TIQHYIYSSMPDHSLYGPWPAVP  124 (350)
T ss_dssp             CSEEEECCCSTTS----------------CHHHHHHHHHHHH----HHHS-------CCSEEEEEECCCGGGTSSCCCCT
T ss_pred             CceEEeecccccc----------------hhhhhhhHHHHHH----HHhC-------CCceEEEeeccccccCCcccchh
Confidence            7887776542211                1112222333333    3322       3467778876654332  23345


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC---CCchHHhHHH-HhcCCC---CC--CCC-HHHHHH
Q 022335          170 VAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK---LAPDEINSKA-RDYMPL---YK--LGE-KWDIAM  239 (299)
Q Consensus       170 Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~---~~~~~~~~~~-~~~~~~---~~--~~~-~~dva~  239 (299)
                      |..+|.....+.+        ..++....+.||++........   .......... .-..+.   ..  +.. .+|++.
T Consensus       125 ~~~~k~~~~~~~~--------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~  196 (350)
T d1xgka_         125 MWAPKFTVENYVR--------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGP  196 (350)
T ss_dssp             TTHHHHHHHHHHH--------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHH
T ss_pred             hhhhHHHHHHHHH--------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHH
Confidence            6667755544322        3356777888876532111000   0000000000 000011   00  122 478999


Q ss_pred             HHHHHcCCCCCCccCcEEEeCCc
Q 022335          240 AALYLTSDTGKYVNGTTLIVDGG  262 (299)
Q Consensus       240 ~~~~l~s~~~~~~~G~~i~~dgg  262 (299)
                      ++..++.+......|+.+.+.|.
T Consensus       197 ~v~~~l~~~~~~~~G~~~~~~g~  219 (350)
T d1xgka_         197 ALLQIFKDGPQKWNGHRIALTFE  219 (350)
T ss_dssp             HHHHHHHHCHHHHTTCEEEECSE
T ss_pred             HHHHHHhCChhhcCCeEEEEeCC
Confidence            98888855444568888888653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.94  E-value=8.9e-15  Score=117.48  Aligned_cols=46  Identities=17%  Similarity=0.387  Sum_probs=42.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL   61 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~   61 (299)
                      ++.|+||+|++|+++|+.|+++|++|++.+|++++++++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            5788888899999999999999999999999999999999988755

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.90  E-value=4.6e-09  Score=88.69  Aligned_cols=212  Identities=16%  Similarity=0.118  Sum_probs=120.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH--HcCCcc
Q 022335           17 ALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE--HFGKLD   93 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~--~~g~id   93 (299)
                      ||||||+|.||.+++++|+++|. .|+++++-.... ... .+.+.      ..+|..+.+.   .......  .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVDL------NIADYMDKED---FLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHTS------CCSEEEEHHH---HHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-ccccc------chhhhccchH---HHHHHhhhhcccchh
Confidence            89999999999999999999996 577776322111 110 11111      1223333333   2332322  346788


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecccccccc----------
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTA----------  163 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~----------  163 (299)
                      +++|.|+.....   ..+   .+...+.|+.+...+.++....            .-++++.||.....+          
T Consensus        71 ~i~~~aa~~~~~---~~~---~~~~~~~~~~~~~~~l~~~~~~------------~i~~v~~ss~~~~~~~~~~~~~~~~  132 (307)
T d1eq2a_          71 AIFHEGACSSTT---EWD---GKYMMDNNYQYSKELLHYCLER------------EIPFLYASSAATYGGRTSDFIESRE  132 (307)
T ss_dssp             EEEECCSCCCTT---CCC---HHHHHHHTHHHHHHHHHHHHHH------------TCCEEEEEEGGGGTTCCSCBCSSGG
T ss_pred             hhhhhccccccc---ccc---cccccccccccccccccccccc------------ccccccccccccccccccccccccc
Confidence            899988743221   212   2345677777777776655433            234555555444322          


Q ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccCCCCCCCC----CCchHHhHHHH----------hcCCC
Q 022335          164 -SWYQIHVAAAKAAVDAITRNLALEWGADYDIRVNGIAPGPIGDTPGMNK----LAPDEINSKAR----------DYMPL  228 (299)
Q Consensus       164 -~~~~~~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i~pG~v~t~~~~~~----~~~~~~~~~~~----------~~~~~  228 (299)
                       ......|+.+|.+.+.+++.+..+    .++.+..+.|..+..+.....    ...........          .....
T Consensus       133 ~~~~~~~Y~~~K~~~e~~~~~~~~~----~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  208 (307)
T d1eq2a_         133 YEKPLNVYGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK  208 (307)
T ss_dssp             GCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C
T ss_pred             ccccccccccccchhhhhccccccc----cccccccccceeEeeccccccccccccccccccccccccceeeecCcccee
Confidence             134567999999999988777644    467888888877754422111    00111111111          11222


Q ss_pred             CCCCCHHHHHHHHHHHcCCCCCCccCcEEEeCCcccc
Q 022335          229 YKLGEKWDIAMAALYLTSDTGKYVNGTTLIVDGGLWL  265 (299)
Q Consensus       229 ~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  265 (299)
                      +.+...+|++.++..++...    ....+++..|...
T Consensus       209 r~~~~v~d~~~~~~~~~~~~----~~~~~~~~~~~~~  241 (307)
T d1eq2a_         209 RDFVYVGDVADVNLWFLENG----VSGIFNLGTGRAE  241 (307)
T ss_dssp             BCEEEHHHHHHHHHHHHHHC----CCEEEEESCSCCB
T ss_pred             eeeeecccHHHHHHHHhhhc----cccccccccccch
Confidence            34577889999988877532    2345666666444

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.17  E-value=6.7e-06  Score=63.99  Aligned_cols=84  Identities=23%  Similarity=0.326  Sum_probs=63.8

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ++++|+++|.|+ ||.|++++..|++.|.+ ++++.|+.+..++........  .........|+.+.+++.+...    
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA----   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc----
Confidence            578999999999 69999999999999985 889999877666554433322  1224455778888888776655    


Q ss_pred             HcCCccEEEEcCCCC
Q 022335           88 HFGKLDILVNAAAGN  102 (299)
Q Consensus        88 ~~g~id~lv~~ag~~  102 (299)
                         ..|++||+....
T Consensus        90 ---~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ---SADILTNGTKVG  101 (182)
T ss_dssp             ---TCSEEEECSSTT
T ss_pred             ---ccceeccccCCc
Confidence               689999998653

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.05  E-value=1.1e-05  Score=61.21  Aligned_cols=73  Identities=18%  Similarity=0.270  Sum_probs=56.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +++++++||+|+ |++|+.+++.|..+|++ +.++.|+.++.+.+.+++.     ...+.     .+++.+.+.      
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-----~~~~~-----~~~~~~~l~------   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-----GEAVR-----FDELVDHLA------   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-----CEECC-----GGGHHHHHH------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-----ccccc-----chhHHHHhc------
Confidence            688999999998 99999999999999985 8899999988888877662     22222     223333333      


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                       ..|++|++.+.
T Consensus        84 -~~Divi~atss   94 (159)
T d1gpja2          84 -RSDVVVSATAA   94 (159)
T ss_dssp             -TCSEEEECCSS
T ss_pred             -cCCEEEEecCC
Confidence             78999999873

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.04  E-value=1e-05  Score=62.14  Aligned_cols=75  Identities=15%  Similarity=0.153  Sum_probs=58.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      .|+++|.|| |.+|+.+|+.|+++|++|++++|+.++++.+.+.+    ........+..........+.       ..|
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~~~   69 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KHD   69 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------ccc
Confidence            689999987 99999999999999999999999998877765433    345556667777777666654       567


Q ss_pred             EEEEcCC
Q 022335           94 ILVNAAA  100 (299)
Q Consensus        94 ~lv~~ag  100 (299)
                      .++....
T Consensus        70 ~~i~~~~   76 (182)
T d1e5qa1          70 LVISLIP   76 (182)
T ss_dssp             EEEECSC
T ss_pred             eeEeecc
Confidence            7776543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.98  E-value=1.8e-05  Score=61.34  Aligned_cols=79  Identities=16%  Similarity=0.182  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +|.++||+||+|++|.+.+.-....|++|+.+++++++.+.    +++.+.+..+..-|-...+.+.+...     ..++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~Ga~~vi~~~~~~~~~~~~~~~~-----~~Gv   99 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQIGFDAAFNYKTVNSLEEALKKAS-----PDGY   99 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSEEEETTSCSCHHHHHHHHC-----TTCE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhhhhhhhcccccccHHHHHHHHhh-----cCCC
Confidence            48999999999999999999888899999999998866444    44455554444333333333322211     2479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++++.|
T Consensus       100 d~v~D~vG  107 (182)
T d1v3va2         100 DCYFDNVG  107 (182)
T ss_dssp             EEEEESSC
T ss_pred             ceeEEecC
Confidence            99999987

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=2.7e-05  Score=59.70  Aligned_cols=76  Identities=17%  Similarity=0.221  Sum_probs=58.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .++||.+||.|+ ||.+++++..|.+.|.+|+++.|+.++.+.+.+.+.... .+..+..|  +.            ...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~~------------~~~   78 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMD--EL------------EGH   78 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--GG------------TTC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccc--cc------------ccc
Confidence            467999999997 788999999999999999999999999998888775543 34433322  11            123


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      ..|++||+....
T Consensus        79 ~~dliIN~Tp~G   90 (170)
T d1nyta1          79 EFDLIINATSSG   90 (170)
T ss_dssp             CCSEEEECCSCG
T ss_pred             ccceeecccccC
Confidence            689999998654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.3e-05  Score=60.20  Aligned_cols=77  Identities=17%  Similarity=0.245  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      .|.++||+||+|++|...+.-....|++|+++++++++.+.+    ++.+.+.. +  |-++.+-.+    ++.+..  .
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~v-i--~~~~~~~~~----~i~~~t~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV-F--NHREVNYID----KIKKYVGEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE-E--ETTSTTHHH----HHHHHHCTT
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCcccc-c--ccccccHHH----HhhhhhccC
Confidence            488999999999999999998888899999999887654443    34554332 2  445544333    333332  3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            5999999876

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.86  E-value=1.7e-05  Score=61.91  Aligned_cols=86  Identities=22%  Similarity=0.216  Sum_probs=58.8

Q ss_pred             CCEEEE-ecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH-HcCC
Q 022335           14 GKVALI-TGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE-HFGK   91 (299)
Q Consensus        14 ~k~vlI-tGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~-~~g~   91 (299)
                      |.+++| +||+|++|.+.+.-.-..|++|+++.++.+..++..+.+++.+.+..+..-+. +..+..+.+.++.. ..++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~-~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQN-NSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHH-HCGGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEecccc-chhHHHHHHHHHHhhccCC
Confidence            555555 79999999999887777899999999988888888888887776554332111 11222333333333 3357


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.+.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999876

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.85  E-value=3.1e-05  Score=56.64  Aligned_cols=73  Identities=14%  Similarity=0.355  Sum_probs=58.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      .++|.|+ |.+|+.+++.|.++|+.|++++.+++..+.+.+++     .+.++..|.++++.++++-      ....|.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~v   69 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADMY   69 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhhh
Confidence            5889998 99999999999999999999999998877654432     3678899999999876651      1367888


Q ss_pred             EEcCC
Q 022335           96 VNAAA  100 (299)
Q Consensus        96 v~~ag  100 (299)
                      +....
T Consensus        70 v~~t~   74 (132)
T d1lssa_          70 IAVTG   74 (132)
T ss_dssp             EECCS
T ss_pred             cccCC
Confidence            87643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.85  E-value=0.00032  Score=52.03  Aligned_cols=115  Identities=12%  Similarity=0.155  Sum_probs=73.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSL---GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .+.+++.|+|+ |.+|..+|..|+.+|  ..|+++|++++.++....++.+.   .....+...|..             
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-------------   68 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS-------------   68 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG-------------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH-------------
Confidence            34678999996 999999999999988  46999999998888777777642   233444554531             


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                       ....-|++|..+|.....   .   ..-.+.+..|.    .+.+.+.+.+.+..+      .+.++++|.
T Consensus        69 -~~~~adivvitag~~~~~---g---~~r~~l~~~N~----~i~~~~~~~i~~~~p------~aivivvtN  122 (146)
T d1ez4a1          69 -DCKDADLVVITAGAPQKP---G---ESRLDLVNKNL----NILSSIVKPVVDSGF------DGIFLVAAN  122 (146)
T ss_dssp             -GGTTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTC------CSEEEECSS
T ss_pred             -HhccccEEEEecccccCC---C---CCHHHHHHHHH----HHHHHHHHHHhhcCC------CcEEEEeCC
Confidence             223679999999854321   1   11122334443    556667777777653      465666553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.82  E-value=7e-05  Score=57.37  Aligned_cols=78  Identities=13%  Similarity=0.190  Sum_probs=59.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+++|.++|.|+ ||.+++++..|.+.+.+|+++.|+.++++.+.+.+.... ++..+..|-.              ...
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~~   78 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PLQ   78 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CCS
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------ccc
Confidence            567999999987 677999999999988899999999999999988886433 4555554421              124


Q ss_pred             CccEEEEcCCCCCC
Q 022335           91 KLDILVNAAAGNFL  104 (299)
Q Consensus        91 ~id~lv~~ag~~~~  104 (299)
                      ..|++||+......
T Consensus        79 ~~diiIN~tp~g~~   92 (171)
T d1p77a1          79 TYDLVINATSAGLS   92 (171)
T ss_dssp             CCSEEEECCCC---
T ss_pred             ccceeeeccccccc
Confidence            78999999876543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.74  E-value=4e-05  Score=59.24  Aligned_cols=77  Identities=22%  Similarity=0.305  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      +|.++||+||+|++|...+.-+...|++|+++++++++.+    .+++.+.+.. +  |-.+++-    .+++.+..  .
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~~Ga~~v-i--~~~~~~~----~~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSRLGVEYV-G--DSRSVDF----ADEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHTTCCSEE-E--ETTCSTH----HHHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccccccccc-c--cCCccCH----HHHHHHHhCCC
Confidence            3889999999999999999988888999999999876543    3445555433 2  3333332    23333333  3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999987

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.70  E-value=8.7e-05  Score=57.30  Aligned_cols=80  Identities=18%  Similarity=0.238  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++..    ++.+.+.. +...=.+..+   ..+.+.+..  
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v-i~~~~~~~~~---~~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADLT-LNRRETSVEE---RRKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSEE-EETTTSCHHH---HHHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc----ccccceEE-EeccccchHH---HHHHHHHhhCC
Confidence            4899999997 8999999998888998 699999999876543    33454433 3222223322   233333333  


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      .++|++|.+.|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            259999999884

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.70  E-value=3e-05  Score=59.73  Aligned_cols=79  Identities=14%  Similarity=0.168  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|+++||+||+|++|..++.-....|++|+++++++++.+.+.    +.+.+.. +  |-++++-.+++ .++. .-..+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lGa~~v-i--~~~~~d~~~~v-~~~t-~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGAWQV-I--NYREEDLVERL-KEIT-GGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSEE-E--ETTTSCHHHHH-HHHT-TTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcCCeEE-E--ECCCCCHHHHH-HHHh-CCCCe
Confidence            3899999999999999999988889999999999998765543    3444322 2  44544333332 2221 12368


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus        99 d~v~d~~g  106 (179)
T d1qora2          99 RVVYDSVG  106 (179)
T ss_dssp             EEEEECSC
T ss_pred             EEEEeCcc
Confidence            99999887

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.69  E-value=8.3e-05  Score=56.66  Aligned_cols=82  Identities=18%  Similarity=0.242  Sum_probs=56.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-GK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g~   91 (299)
                      .|.+++|+| .|++|...+..+...|++|+++++++++++..    ++.+.+..+ ..|- ..++.....+.+.+.. ++
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a----~~~ga~~~~-~~~~-~~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGADVTL-VVDP-AKEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEEE-ECCT-TTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHH----HHcCCcEEE-eccc-cccccchhhhhhhcccccC
Confidence            478999997 58999999988888999999999999876554    334444332 2222 2223344445555555 46


Q ss_pred             ccEEEEcCCC
Q 022335           92 LDILVNAAAG  101 (299)
Q Consensus        92 id~lv~~ag~  101 (299)
                      +|++|.++|.
T Consensus        99 ~D~vid~~g~  108 (170)
T d1e3ja2          99 PNVTIDCSGN  108 (170)
T ss_dssp             CSEEEECSCC
T ss_pred             CceeeecCCC
Confidence            9999999983

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.64  E-value=0.00082  Score=49.82  Aligned_cols=114  Identities=12%  Similarity=0.143  Sum_probs=76.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .++++.|+|+ |.+|..+|..|+.+|.  .++++|++++.++....++.+.    ...+.+...|..             
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~-------------   70 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD-------------   70 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG-------------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH-------------
Confidence            4778999997 9999999999999875  5999999999888887777653    223444444421             


Q ss_pred             HHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           87 EHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                       .+..-|++|..+|......  +...+.    +..|    ..+.+.+.+.+.+..+      .+.+++++.
T Consensus        71 -~l~daDvvvitag~~~~~~--~~R~dl----~~~N----~~i~~~i~~~i~~~~p------~a~~ivvtN  124 (148)
T d1ldna1          71 -DCRDADLVVICAGANQKPG--ETRLDL----VDKN----IAIFRSIVESVMASGF------QGLFLVATN  124 (148)
T ss_dssp             -GTTTCSEEEECCSCCCCTT--TCSGGG----HHHH----HHHHHHHHHHHHHHTC------CSEEEECSS
T ss_pred             -HhccceeEEEecccccccC--cchhHH----HHHH----HHHHHHHHHHHHhhCC------CceEEEecC
Confidence             1236799999999653221  112222    2223    3556677777777653      576777654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=6.3e-05  Score=49.32  Aligned_cols=43  Identities=19%  Similarity=0.278  Sum_probs=37.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAV   55 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~   55 (299)
                      ++.++||+||+||+|.....-+...|++|+.+.+++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4889999999999999999977788999999999988766543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.58  E-value=4.2e-05  Score=55.96  Aligned_cols=73  Identities=12%  Similarity=0.159  Sum_probs=55.4

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      |.++|.|+ |.+|+.+++.|.++|+.|++++.+++..+.+.    ..+  ...+..|.++++.++++-      ..+.|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a~------i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSLG------IRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHHT------GGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC--CcceeeecccchhhhccC------CccccE
Confidence            46788877 79999999999999999999999997766542    223  345678999988776641      125688


Q ss_pred             EEEcCC
Q 022335           95 LVNAAA  100 (299)
Q Consensus        95 lv~~ag  100 (299)
                      +|...+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            877765

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=0.00019  Score=57.22  Aligned_cols=81  Identities=20%  Similarity=0.242  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEecC----------------CChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCC
Q 022335           10 DILKGKVALITGG----------------GSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVR   73 (299)
Q Consensus        10 ~~l~~k~vlItGa----------------s~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~   73 (299)
                      .+|+|+++|||+|                ||..|.+||+++..+|++|.++......         .....+..+.  +.
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~~--~~   70 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRVD--VM   70 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEEE--CC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccce--eh
Confidence            4789999999998                4899999999999999999988764321         1122344443  34


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCCCC
Q 022335           74 RQEHAKKVVESTFEHFGKLDILVNAAAGNFL  104 (299)
Q Consensus        74 ~~~~v~~~~~~~~~~~g~id~lv~~ag~~~~  104 (299)
                      +.++..+.+.   +.+...|++|++|++...
T Consensus        71 t~~~m~~~~~---~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          71 TALEMEAAVN---ASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             SHHHHHHHHH---HHGGGCSEEEECCBCCSE
T ss_pred             hhHHHHHHHH---hhhccceeEeeeechhhh
Confidence            5555544443   445578999999987643

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.48  E-value=0.0003  Score=53.61  Aligned_cols=74  Identities=18%  Similarity=0.283  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+||+|++|...+.-+...|++|+.+++++++.+..    ++.+.+..+   |..+.      ..++ ....++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~----~~lGa~~~i---~~~~~------~~~~-~~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALGAEEAA---TYAEV------PERA-KAWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTTCSEEE---EGGGH------HHHH-HHTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc----cccccceee---ehhhh------hhhh-hccccc
Confidence            589999999999999999888778899999999988765543    344544332   22221      1222 223579


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999776

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=0.00078  Score=51.09  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF-G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~-g   90 (299)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++.+++..    ++.+.+.. +..+-.+..+..+.+.   ..+ .
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a----~~~Ga~~~-~~~~~~~~~~~~~~~~---~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADLV-LQISKESPQEIARKVE---GQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSEE-EECSSCCHHHHHHHHH---HHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH----HHhCCccc-cccccccccccccccc---ccCCC
Confidence            3788999987 9999999998888999 699999998876653    33454433 3334345555444433   334 3


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|++|.+.|
T Consensus        97 g~Dvvid~~G  106 (171)
T d1pl8a2          97 KPEVTIECTG  106 (171)
T ss_dssp             CCSEEEECSC
T ss_pred             CceEEEeccC
Confidence            7999999998

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=6.9e-05  Score=57.63  Aligned_cols=78  Identities=21%  Similarity=0.247  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||+||+||+|.+.+.-....|++|+.+++++++.+.+    ++.+.+..+ .-   +.. ..+....+  .-+++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~----~~lGa~~vi-~~---~~~-~~~~~~~~--~~~gv   99 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEVL-AR---EDV-MAERIRPL--DKQRW   99 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEEE-EC---C----------C--CSCCE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH----Hhcccceee-ec---chh-HHHHHHHh--hccCc
Confidence            488999999999999999887778899999999998775554    334544433 21   111 11211111  12489


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |+++.+.|.
T Consensus       100 D~vid~vgg  108 (176)
T d1xa0a2         100 AAAVDPVGG  108 (176)
T ss_dssp             EEEEECSTT
T ss_pred             CEEEEcCCc
Confidence            999999883

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.36  E-value=0.00081  Score=50.91  Aligned_cols=45  Identities=16%  Similarity=0.282  Sum_probs=39.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~   58 (299)
                      +++.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999988 8999999999999997 5999999999888877655

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.30  E-value=0.0059  Score=45.52  Aligned_cols=118  Identities=12%  Similarity=0.086  Sum_probs=78.4

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~   82 (299)
                      ...+..+.+.|+|+ |.+|..++..|+.+|.  .++++|.+++..+....++.+.    +........|..   +     
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~---~-----   85 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS---V-----   85 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG---G-----
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh---h-----
Confidence            34556788999996 9999999999999986  5999999998888887777653    222222223322   1     


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                            +..-|++|..||.....   ..+..   +.+..|    ..+++.+.+.+.+..+      .+.+|++|.
T Consensus        86 ------~~~adiVVitAg~~~~~---g~tR~---~l~~~N----~~i~~~i~~~i~~~~p------~aiiivvtN  138 (160)
T d1i0za1          86 ------TANSKIVVVTAGVRQQE---GESRL---NLVQRN----VNVFKFIIPQIVKYSP------DCIIIVVSN  138 (160)
T ss_dssp             ------GTTCSEEEECCSCCCCT---TCCGG---GGHHHH----HHHHHHHHHHHHHHCT------TCEEEECSS
T ss_pred             ------cccccEEEEecCCcccc---CcchH---HHHHHH----HHHHHHHHHHHHhcCC------CcEEEEeCC
Confidence                  23679999999965321   12222   223333    3567777888887653      566776665

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=0.0024  Score=47.71  Aligned_cols=119  Identities=11%  Similarity=0.158  Sum_probs=76.9

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG----IKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~v~~~   81 (299)
                      +...++...+.|+|+ |.+|..+|..|+.+|.  .+++++++++.++....++.+..    ........|..        
T Consensus        13 ~~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~--------   83 (159)
T d2ldxa1          13 PEDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN--------   83 (159)
T ss_dssp             SCCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG--------
T ss_pred             ccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh--------
Confidence            344456667889996 9999999999999875  59999999998888888887542    22222333321        


Q ss_pred             HHHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           82 VESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                            ....-|++|..+|.........  .+.    ++.|    ..+.+.+.+.+.+..+      .+.+++++.
T Consensus        84 ------~~~~adivvitag~~~~~~~~R--~dl----l~~N----~~i~~~i~~~i~~~~p------~~ivivvtN  137 (159)
T d2ldxa1          84 ------VSANSKLVIITAGARMVSGQTR--LDL----LQRN----VAIMKAIVPGVIQNSP------DCKIIVVTN  137 (159)
T ss_dssp             ------GGTTEEEEEECCSCCCCTTTCS--SCT----THHH----HHHHHHHTTTHHHHST------TCEEEECSS
T ss_pred             ------hhccccEEEEecccccCCCCCH--HHH----HHHH----HHHHHHHHHHHhccCC------CeEEEEeCC
Confidence                  2246799999998654322111  111    2222    3456667777776653      577777665

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.29  E-value=0.0032  Score=46.33  Aligned_cols=116  Identities=14%  Similarity=0.145  Sum_probs=72.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      |++.|+|+ |.+|..+|..|+.+|.  .+++++.++++++....++.+.    ..+......|.   ++           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            57888995 8999999999999874  6999999999888777767543    22334333332   11           


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +..-|++|..||......  +.+..+=.+.+..|    ..+++.+.+.+.+..+      .+.+|++|.
T Consensus        67 l~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p------~aivivvtN  123 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQ--DNPTGDRFAELKFT----SSMVQSVGTNLKESGF------HGVLVVISN  123 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC---------CTTHHHH----HHHHHHHHHHHHHTTC------CSEEEECSS
T ss_pred             hccccEEEEecccccccc--ccCCccHHHHHHHH----HHHHHHHHHHHhhcCC------CeEEEEecC
Confidence            236799999999653211  10111111223333    3566778888887653      466666554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.27  E-value=0.00029  Score=53.48  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|+|++|++|..++..+...|. +|+++++++++.+...    +.+.+. ++.  -++.+-.++..+..  .-+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~~Ga~~-~i~--~~~~~~~~~~~~~~--~~~~   97 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----RAGADY-VIN--ASMQDPLAEIRRIT--ESKG   97 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----HHTCSE-EEE--TTTSCHHHHHHHHT--TTSC
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----HcCCce-eec--cCCcCHHHHHHHHh--hccc
Confidence            378999999999999999998888885 6888998887655443    344443 233  33333333332221  1136


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.++|
T Consensus        98 ~d~vid~~g  106 (170)
T d1jvba2          98 VDAVIDLNN  106 (170)
T ss_dssp             EEEEEESCC
T ss_pred             chhhhcccc
Confidence            999999987

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.21  E-value=0.0012  Score=49.79  Aligned_cols=77  Identities=21%  Similarity=0.155  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++..    ++.+.+..+...+-.+.         .....+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a----~~lGa~~~i~~~~~~~~---------~~~~~~~~   92 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA----MKMGADHYIATLEEGDW---------GEKYFDTF   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHHTCSEEEEGGGTSCH---------HHHSCSCE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh----hccCCcEEeeccchHHH---------HHhhhccc
Confidence            4889999987 8999998887778899999999998876543    33454433322222111         11223579


Q ss_pred             cEEEEcCCCCC
Q 022335           93 DILVNAAAGNF  103 (299)
Q Consensus        93 d~lv~~ag~~~  103 (299)
                      |.++.+.+...
T Consensus        93 d~vi~~~~~~~  103 (168)
T d1piwa2          93 DLIVVCASSLT  103 (168)
T ss_dssp             EEEEECCSCST
T ss_pred             ceEEEEecCCc
Confidence            99999877543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.00049  Score=53.16  Aligned_cols=78  Identities=13%  Similarity=0.193  Sum_probs=50.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.+|||+||+||+|...+.-....|+++++ +++++++...+..++   +.+.. +  |.++++ +.+.+.++..  .++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v-i--~~~~~~-~~~~~~~~~~--~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA-V--NYKTGN-VAEQLREACP--GGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE-E--ETTSSC-HHHHHHHHCT--TCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE-e--eccchh-HHHHHHHHhc--cCc
Confidence            489999999999999988876668987554 566665555544433   33322 2  333332 2333333322  479


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |+++.+.|
T Consensus       102 Dvv~D~vG  109 (187)
T d1vj1a2         102 DVYFDNVG  109 (187)
T ss_dssp             EEEEESSC
T ss_pred             eEEEecCC
Confidence            99999987

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00082  Score=50.83  Aligned_cols=74  Identities=24%  Similarity=0.337  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+|+|.|+ |++|...+..+...|++++++++++++.+..    ++.+.+..   .|-.+.+...       ....++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a----~~lGad~~---i~~~~~~~~~-------~~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA----KALGADEV---VNSRNADEMA-------AHLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HHHTCSEE---EETTCHHHHH-------TTTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH----hccCCcEE---EECchhhHHH-------HhcCCC
Confidence            4889999986 8999998887778899999999988775432    33344332   2444444322       122479


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |+++.+.|.
T Consensus        95 D~vid~~g~  103 (168)
T d1uufa2          95 DFILNTVAA  103 (168)
T ss_dssp             EEEEECCSS
T ss_pred             ceeeeeeec
Confidence            999999884

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.02  E-value=0.00067  Score=51.77  Aligned_cols=77  Identities=17%  Similarity=0.250  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--   89 (299)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++...    +.+.... +  |.++++..+    .+.+..  
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~----~lGa~~~-i--~~~~~~~~~----~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK----FYGATDI-L--NYKNGHIED----QVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH----HHTCSEE-E--CGGGSCHHH----HHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH----hhCcccc-c--cccchhHHH----HHHHHhhc
Confidence            3788999986 8999998888888898 5889999987755542    3343322 2  333322222    233322  


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      .++|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            359999999984

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.01  E-value=0.0035  Score=47.60  Aligned_cols=85  Identities=15%  Similarity=0.149  Sum_probs=62.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---------------HHhcCCcEEEEEcCCCCHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSA---------------LRSLGIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~---------------~~~~~~~v~~~~~Dl~~~~~v~   79 (299)
                      .++-|+|. |-+|..+|+.|+++|++|++.+|++++.+.+.++               +.+.-.+...+-..+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45778877 8999999999999999999999999888876543               1121122334444667778888


Q ss_pred             HHHHHHHHHcCCccEEEEcCC
Q 022335           80 KVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        80 ~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ++.+.+.....+=+++|.+..
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888777666677777754

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.96  E-value=0.028  Score=40.78  Aligned_cols=112  Identities=10%  Similarity=0.028  Sum_probs=72.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCC--hhHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRR--KQVLDAAVSALRS---LGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~--~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++.|+|++|.+|..+|..+..++.  .+++++.+  ++.++....++.+   ...+..+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            588999999999999999999876  48999854  4445555555654   233444444442   11           


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +..-|++|..||.....   ..+..   +.++.|.    .+++.+.+.+.+..+      .+.++.++.
T Consensus        68 ~~~aDiVvitaG~~~~~---g~~R~---dl~~~N~----~I~~~i~~~i~~~~p------~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP---GQTRI---DLAGDNA----PIMEDIQSSLDEHND------DYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCCT---TCCHH---HHHHHHH----HHHHHHHHHHHTTCS------CCEEEECCS
T ss_pred             hhhcCEEEEeccccccc---CCchh---hHHHHHH----HHHHHHHHHHHhcCC------CceEEEecC
Confidence            23689999999964321   22322   2344443    467777888887653      566666654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.95  E-value=0.023  Score=41.44  Aligned_cols=103  Identities=12%  Similarity=0.123  Sum_probs=65.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChh--HHHHHHHHHHhc----CCcEE--EEEcCCCCHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQ--VLDAAVSALRSL----GIKAV--GFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~--~~~~~~~~~~~~----~~~v~--~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .+.|+||+|.+|..+|..|+.+|.  .+++++++++  +++....++.+.    ..+++  +...+  +.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~----------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL----------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------
Confidence            589999999999999999999984  6999998863  455556666542    22333  22322  11          


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGG  141 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~  141 (299)
                       +.+..-|++|..||....   ...+..   +.+..|.    .+.+.+.+.+.+..
T Consensus        70 -~~l~~aDvVVitAG~~~~---~g~sR~---dl~~~Na----~iv~~i~~~i~~~~  114 (145)
T d1hyea1          70 -RIIDESDVVIITSGVPRK---EGMSRM---DLAKTNA----KIVGKYAKKIAEIC  114 (145)
T ss_dssp             -GGGTTCSEEEECCSCCCC---TTCCHH---HHHHHHH----HHHHHHHHHHHHHC
T ss_pred             -HHhccceEEEEecccccC---CCCChh---hhhhhhH----HHHHHHHHHHhccC
Confidence             112368999999996432   222333   2344454    35666666666654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.94  E-value=0.003  Score=47.33  Aligned_cols=76  Identities=21%  Similarity=0.296  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+++|.|+ |++|...+.-+...|++|+++++++++++..    ++.+.+.. +  |.++.+..+++    .+..++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a----~~~Ga~~~-i--~~~~~~~~~~~----~~~~~g~   94 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA----RKLGASLT-V--NARQEDPVEAI----QRDIGGA   94 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE-E--ETTTSCHHHHH----HHHHSSE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh----hccCcccc-c--cccchhHHHHH----HHhhcCC
Confidence            3889999886 9999998888888899999999998776543    34454333 2  33333333332    2333456


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      +.+|.+++
T Consensus        95 ~~~i~~~~  102 (166)
T d1llua2          95 HGVLVTAV  102 (166)
T ss_dssp             EEEEECCS
T ss_pred             cccccccc
Confidence            66666655

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0025  Score=47.14  Aligned_cols=76  Identities=13%  Similarity=0.097  Sum_probs=59.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      .++|.|. +.+|+.+++.|.++|.+|++++.+++......++...  ..+.++..|.++++-++++--      .+.|.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~i------~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGI------DRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTT------TTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhcc------ccCCEE
Confidence            4777777 6999999999999999999999998766655555543  358889999999987666422      367888


Q ss_pred             EEcCC
Q 022335           96 VNAAA  100 (299)
Q Consensus        96 v~~ag  100 (299)
                      |...+
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            88764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.94  E-value=0.031  Score=40.44  Aligned_cols=111  Identities=14%  Similarity=0.136  Sum_probs=72.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSL---GIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++.|+|+ |.+|..++..++.++  ..++++|.+++.++....++.+.   ..+......|.   ++           +.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hc
Confidence            4778897 899999999999887  45999999998888777766542   23344444332   11           23


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .-|++|..+|.....   ..+..   +.+..|.    .+.+.+.+.+.+..+      .+.++++|.
T Consensus        67 ~adivvitag~~~~~---g~~r~---dl~~~N~----~I~~~i~~~i~~~~p------~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP---GETRL---QLLGRNA----RVMKEIARNVSKYAP------DSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCS---SCCHH---HHHHHHH----HHHHHHHHHHHHHCT------TCEEEECSS
T ss_pred             CCCEEEEecccccCC---Ccchh---hhhcccc----chHHHHHHHHHhcCC------CcEEEEeCC
Confidence            679999999965332   22222   2334443    467777888888663      466666553

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.93  E-value=0.0039  Score=46.33  Aligned_cols=120  Identities=14%  Similarity=0.105  Sum_probs=72.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      -+.+++.|+|+ |.+|..+|..|+..+. ++++++.+++.++....++.+.    +.+......  ++.+   +.+    
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~---~~~----   74 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYE---AAL----   74 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHH---HHH----
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchh---hhh----
Confidence            35778999997 9999999998888884 6999999998877777766542    222222211  1221   111    


Q ss_pred             HHcCCccEEEEcCCCCCCCCC--CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           87 EHFGKLDILVNAAAGNFLVSA--EDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                         ..-|++|..+|......-  .+.+..+   .+..|    ..+++.+.+.+.+..+      .+.|+++|.
T Consensus        75 ---~~adiVvitag~~~~~g~~~~~~tR~~---l~~~n----~~iv~~i~~~i~~~~p------~aiviivsN  131 (154)
T d1pzga1          75 ---TGADCVIVTAGLTKVPGKPDSEWSRND---LLPFN----SKIIREIGQNIKKYCP------KTFIIVVTN  131 (154)
T ss_dssp             ---TTCSEEEECCSCSSCTTCCGGGCCGGG---GHHHH----HHHHHHHHHHHHHHCT------TCEEEECCS
T ss_pred             ---cCCCeEEEecccccCCCCCCcccchhh---hhhhh----HHHHHHHHHHHHhcCC------CcEEEEeCC
Confidence               267999999986543111  1112111   22333    3456666777776653      466666554

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.93  E-value=0.00041  Score=52.64  Aligned_cols=75  Identities=21%  Similarity=0.284  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--C
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF--G   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~--g   90 (299)
                      ++.+|||+||+||+|.+.+.-....|++|+.+++++++.+.+    ++.+.+..+..      +   +...+.....  +
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~----~~lGad~vi~~------~---~~~~~~~~~~~~~   89 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL----KQLGASEVISR------E---DVYDGTLKALSKQ   89 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH----HHHTCSEEEEH------H---HHCSSCCCSSCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH----HhhcccceEec------c---chhchhhhcccCC
Confidence            467899999999999999876667799999999988775554    33454433211      1   1111111111  4


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++|+++.+.|
T Consensus        90 gvd~vid~vg   99 (167)
T d1tt7a2          90 QWQGAVDPVG   99 (167)
T ss_dssp             CEEEEEESCC
T ss_pred             CceEEEecCc
Confidence            7999999987

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.93  E-value=0.0012  Score=48.89  Aligned_cols=83  Identities=12%  Similarity=0.118  Sum_probs=55.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +..-+++.|+||.|.+|..+++.|.++|++|.+.+++........    ..+.+..++..++   ..+...+.++.....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~~~~~---~~~~~v~~~~~~~~~   78 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIVSVPI---NLTLETIERLKPYLT   78 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEECSCG---GGHHHHHHHHGGGCC
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhccccccccch---hhheeeeeccccccc
Confidence            344678999999999999999999999999999999876533321    1233455554443   345555565555443


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      +=.+++..+.
T Consensus        79 ~~~iiiD~~S   88 (152)
T d2pv7a2          79 ENMLLADLTS   88 (152)
T ss_dssp             TTSEEEECCS
T ss_pred             CCceEEEecc
Confidence            3345555554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.92  E-value=0.0027  Score=48.30  Aligned_cols=80  Identities=14%  Similarity=0.218  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|+|+ ||+|...+..+...|+ +|++++.++++++...    +.+.+..+..-|-.+.  .+...+..  .-++
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak----~~GA~~~in~~~~~~~--~~~~~~~~--~g~G   99 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM----AVGATECISPKDSTKP--ISEVLSEM--TGNN   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HHTCSEEECGGGCSSC--HHHHHHHH--HTSC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH----hcCCcEEECccccchH--HHHHHHHh--cccc
Confidence            4889999986 8999999999999995 6999999998876532    3344444333332221  12222211  1247


Q ss_pred             ccEEEEcCCC
Q 022335           92 LDILVNAAAG  101 (299)
Q Consensus        92 id~lv~~ag~  101 (299)
                      +|++|.+.|.
T Consensus       100 ~d~vi~~~g~  109 (176)
T d1d1ta2         100 VGYTFEVIGH  109 (176)
T ss_dssp             CCEEEECSCC
T ss_pred             ceEEEEeCCc
Confidence            9999999883

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.91  E-value=0.0058  Score=44.66  Aligned_cols=112  Identities=11%  Similarity=0.144  Sum_probs=68.8

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc----CCcEEEEE-cCCCCHHHHHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL----GIKAVGFE-GDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dl~~~~~v~~~~~~~~~~   88 (299)
                      |++.|+|+ |.+|..+|..|+.++. ++++++.+++..+....++.+.    .....+.. -|..   +           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~---~-----------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA---D-----------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG---G-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH---H-----------
Confidence            46778896 9999999999998875 6999999988777766666432    22232222 2211   1           


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +..-|++|.+||.....   ..+   -.+.+..|.    .+++.+.+.+.+..+      .+.++++|.
T Consensus        67 ~~~advvvitag~~~~~---~~~---r~dl~~~N~----~i~~~i~~~i~k~~p------~aivivvtN  119 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKP---GMS---REDLIKVNA----DITRACISQAAPLSP------NAVIIMVNN  119 (142)
T ss_dssp             GTTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCT------TCEEEECSS
T ss_pred             hcCCCEEEEeeeccCCc---Ccc---hhHHHhHHH----HHHHHHHHHHhccCC------CceEEEeCC
Confidence            23679999999965321   111   122344443    467778888877653      465665443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.91  E-value=0.0029  Score=46.38  Aligned_cols=111  Identities=14%  Similarity=0.097  Sum_probs=66.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+.|+|+ |.+|..++..++.++.  .++++|++++.++....++.+..   ........|   .           +.+.
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~-----------~~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y-----------SDVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G-----------GGGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H-----------HHhC
Confidence            4677797 9999999999999875  59999999988777777776532   223322221   1           1234


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .-|++|..||.....   ..+.   .+.+..|.    .+++.+.+.+.+..+      .+.++++|.
T Consensus        68 ~adivvitag~~~~~---~~~r---~~l~~~N~----~i~~~i~~~i~~~~p------~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP---GETR---LDLAKKNV----MIAKEVTQNIMKYYN------HGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC---------CH---HHHHHHHH----HHHHHHHHHHHHHCC------SCEEEECSS
T ss_pred             CCceEEEecccccCc---Ccch---hHHhhHHH----HHHHHHHHHhhccCC------CceEEEecC
Confidence            679999999954321   1122   23344444    566777777777653      566666654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.90  E-value=0.00066  Score=51.96  Aligned_cols=41  Identities=20%  Similarity=0.293  Sum_probs=35.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      +.++||+||+||+|...+.-....|++|+.+++++++.+.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            56899999999999998887778899999999998875543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.90  E-value=0.0022  Score=48.63  Aligned_cols=77  Identities=14%  Similarity=0.191  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEE-EEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVA-IMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv-~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|.|+ |++|...+..+...|++++ ++++++.+++...    +.+.. +++  |.++++ +.+.+.++.  .++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~----~~Ga~-~~i--~~~~~~-~~~~i~~~t--~gg   96 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK----QLGAT-HVI--NSKTQD-PVAAIKEIT--DGG   96 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----HHTCS-EEE--ETTTSC-HHHHHHHHT--TSC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH----HcCCe-EEE--eCCCcC-HHHHHHHHc--CCC
Confidence            3889999997 8999999988888898765 5667776655432    23432 233  333332 222222221  258


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++|.+.|
T Consensus        97 ~D~vid~~G  105 (174)
T d1f8fa2          97 VNFALESTG  105 (174)
T ss_dssp             EEEEEECSC
T ss_pred             CcEEEEcCC
Confidence            999999998

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.88  E-value=0.0055  Score=45.79  Aligned_cols=81  Identities=15%  Similarity=0.143  Sum_probs=56.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH---------Hh-cCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL---------RS-LGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~---------~~-~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ++.|+|+ |-+|..+|+.|.++|++|++.+|+++..+...+.-         .. ...++.++..   ..+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            4777766 99999999999999999999999987766544321         00 0234444443   367788888888


Q ss_pred             HHHcCCccEEEEcCC
Q 022335           86 FEHFGKLDILVNAAA  100 (299)
Q Consensus        86 ~~~~g~id~lv~~ag  100 (299)
                      ...+.+=.++++..+
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766555556666544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.00051  Score=46.61  Aligned_cols=75  Identities=19%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +++||+++|.|. |..|+++|+.|.++|++|.+.+.+....  ..+++   .....+...... .+    .+.       
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~--~~~~~---~~~~~~~~~~~~-~~----~~~-------   63 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPP--GLDKL---PEAVERHTGSLN-DE----WLM-------   63 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCT--TGGGS---CTTSCEEESBCC-HH----HHH-------
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCch--hHHHH---hhccceeecccc-hh----hhc-------
Confidence            688999999998 5679999999999999999999865321  11111   112223333321 11    122       


Q ss_pred             CccEEEEcCCCCC
Q 022335           91 KLDILVNAAAGNF  103 (299)
Q Consensus        91 ~id~lv~~ag~~~  103 (299)
                      .+|.+|...|+..
T Consensus        64 ~~d~vi~SPGi~~   76 (93)
T d2jfga1          64 AADLIVASPGIAL   76 (93)
T ss_dssp             HCSEEEECTTSCT
T ss_pred             cCCEEEECCCCCC
Confidence            5799999999753

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.85  E-value=0.017  Score=41.92  Aligned_cols=112  Identities=8%  Similarity=0.088  Sum_probs=69.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           16 VALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++.|+|+ |.+|..++..|+.+|  ..++++|.+++.++.....+.+.    ..+.++...+  +.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            4788896 999999999999987  46999999998777665555432    2334443322  1111           2


Q ss_pred             CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ...|++|..+|.....   ..+..   +.+..|.    .+++.+.+.+.+..+      .+.++++|.
T Consensus        68 ~dadvvvitag~~~~~---g~~r~---~l~~~N~----~i~~~i~~~i~~~~p------~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKP---GMTRE---DLLMKNA----GIVKEVTDNIMKHSK------NPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCT---TCCHH---HHHHHHH----HHHHHHHHHHHHHCS------SCEEEECCS
T ss_pred             cCCeEEEEEEecCCCC---CCchH---HHHHHHH----HHHHHHHHHhhccCC------CeEEEEecC
Confidence            3689999999964321   12222   2233333    345666666666553      466666544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.84  E-value=0.0011  Score=50.46  Aligned_cols=80  Identities=16%  Similarity=0.247  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+..    ++.+....+...|-.  +.+.+......  .++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a----~~~Ga~~~i~~~~~~--~~~~~~~~~~~--~~G   98 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATECVNPQDYK--KPIQEVLTEMS--NGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEEECGGGCS--SCHHHHHHHHT--TSC
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH----HHhCCeeEEecCCch--hHHHHHHHHHh--cCC
Confidence            4889999999 6899999999999985 688899998876543    233433332222222  22333333322  258


Q ss_pred             ccEEEEcCCC
Q 022335           92 LDILVNAAAG  101 (299)
Q Consensus        92 id~lv~~ag~  101 (299)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2jhfa2          99 VDFSFEVIGR  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEecCCc
Confidence            9999999884

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.84  E-value=0.01  Score=43.35  Aligned_cols=115  Identities=14%  Similarity=0.146  Sum_probs=67.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCe--EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           16 VALITGGGSGIGFEISTQFGKHGAS--VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++.|+||+|.+|.++|..|+.+|.-  +++++.++.+.+.  .++.+... ......-+. ..+..+.+       ..-|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~-~~~~~~~~~-~~~~~~~~-------~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIET-RATVKGYLG-PEQLPDCL-------KGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSS-SCEEEEEES-GGGHHHHH-------TTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhh-hcCCCeEEc-CCChHHHh-------CCCC
Confidence            5899999999999999999988763  9999988754433  34433221 111111111 22222222       3689


Q ss_pred             EEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           94 ILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ++|..+|.....   ..+..+   .++.|..    .++.+.+.+.+..+      .+.|+.+|.
T Consensus        71 ivVitag~~~~~---g~sR~~---ll~~N~~----i~~~i~~~i~~~~p------~~iiivvtN  118 (144)
T d1mlda1          71 VVVIPAGVPRKP---GMTRDD---LFNTNAT----IVATLTAACAQHCP------DAMICIISN  118 (144)
T ss_dssp             EEEECCSCCCCT---TCCGGG---GHHHHHH----HHHHHHHHHHHHCT------TSEEEECSS
T ss_pred             EEEECCCcCCCC---CCCcch---HHHHHHH----HHHHHHHHHHhcCC------CeEEEEecC
Confidence            999999964321   122222   3444443    45666777776653      566666665

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.83  E-value=0.015  Score=43.93  Aligned_cols=106  Identities=14%  Similarity=0.093  Sum_probs=64.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHhcCC-cEE-EEEcCCCCHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRK--QVLDAAVSALRSLGI-KAV-GFEGDVRRQEHAKKVV   82 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~-~v~-~~~~Dl~~~~~v~~~~   82 (299)
                      ...|.||||+|.||..++..|++...       .+.+++...  ..++...-++.+... ... +...  ++..      
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~------   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY------   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch------
Confidence            44799999999999999999997532       355666654  345666666654422 122 1222  1211      


Q ss_pred             HHHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q 022335           83 ESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGG  141 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~  141 (299)
                          +.+...|++|..+|....   ...+.++   .+..|    ..+++.+.+.+.+..
T Consensus        96 ----~~~~~aDvVvi~ag~~rk---pg~tR~D---ll~~N----~~I~k~~~~~i~~~a  140 (175)
T d7mdha1          96 ----EVFEDVDWALLIGAKPRG---PGMERAA---LLDIN----GQIFADQGKALNAVA  140 (175)
T ss_dssp             ----HHTTTCSEEEECCCCCCC---TTCCHHH---HHHHH----HHHHHHHHHHHHHHS
T ss_pred             ----hhccCCceEEEeeccCCC---CCCcHHH---HHHHH----HHHHHHHHHHHHhhC
Confidence                223478999999986532   2334433   44445    456677777777753

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.81  E-value=0.029  Score=40.80  Aligned_cols=112  Identities=14%  Similarity=0.120  Sum_probs=71.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL---GIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++.|+|+ |.+|.++|..|+.+|.  .+++++.+++.++....++.+.   .....+...+  +.++           ..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~-----------~~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEI-----------CR   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHH-----------hh
Confidence            4778897 9999999999999876  5999999998888777777653   2223332222  1111           12


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .-|++|..+|....   ...+..   +.+..|.    .+.+.+.+.+.+..+      .+.++++|.
T Consensus        69 daDvVVitaG~~~~---~g~~R~---dl~~~N~----~i~~~i~~~i~~~~p------~ai~ivvtN  119 (143)
T d1llda1          69 DADMVVITAGPRQK---PGQSRL---ELVGATV----NILKAIMPNLVKVAP------NAIYMLITN  119 (143)
T ss_dssp             TCSEEEECCCCCCC---TTCCHH---HHHHHHH----HHHHHHHHHHHHHCT------TSEEEECCS
T ss_pred             CCcEEEEecccccC---CCCchh---hhhhhhH----HHHHHHHHHHHhhCC------CeEEEEeCC
Confidence            56999999996432   123332   2344444    456666777777653      466666553

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.69  E-value=0.0039  Score=47.03  Aligned_cols=77  Identities=18%  Similarity=0.241  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|.|+ |++|...+..+...|+. |+++++++++++.+    ++.+... ++..+   .+.+++..+...  -.+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~----~~~ga~~-~i~~~---~~~~~~~~~~~~--~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGADH-VVDAR---RDPVKQVMELTR--GRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCSE-EEETT---SCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHH----hhcccce-eecCc---ccHHHHHHHhhC--CCC
Confidence            3789999886 99999988888778875 66778887665543    3344432 33322   233333333211  136


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++|.++|
T Consensus       101 ~d~vid~~g  109 (172)
T d1h2ba2         101 VNVAMDFVG  109 (172)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEEecC
Confidence            999999998

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.036  Score=40.34  Aligned_cols=113  Identities=14%  Similarity=0.243  Sum_probs=69.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---CCeEEEEeCChhHHHHHHHHHHhcCCc--EEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           16 VALITGGGSGIGFEISTQFGKH---GASVAIMGRRKQVLDAAVSALRSLGIK--AVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~---G~~Vv~~~r~~~~~~~~~~~~~~~~~~--v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      ++.|+|++|.+|.+++..|+.+   +..+++++..+ ..+...-++.+....  ...+ ..-.+.+.    +.       
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~~~----~~-------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDATPA----LE-------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCHHH----HT-------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCccc----cC-------
Confidence            5889999999999999988643   46799999865 455655666654322  2222 22223322    11       


Q ss_pred             CccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           91 KLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      .-|++|..+|.....   ..+..   +.+..|.    .+.+.+.+.+.+..+      ++.||++|.
T Consensus        69 ~aDvvvitaG~~~k~---g~~R~---dl~~~N~----~i~~~v~~~i~~~~p------~aivivvtN  119 (145)
T d2cmda1          69 GADVVLISAGVRRKP---GMDRS---DLFNVNA----GIVKNLVQQVAKTCP------KACIGIITN  119 (145)
T ss_dssp             TCSEEEECCSCCCCT---TCCGG---GGHHHHH----HHHHHHHHHHHHHCT------TSEEEECSS
T ss_pred             CCCEEEECCCccCCC---Ccchh---hHHHHHH----HHHHHHHHHHHhhCC------CcEEEEccC
Confidence            579999999965322   12222   2344453    455666677776653      566666665

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0023  Score=49.51  Aligned_cols=44  Identities=18%  Similarity=0.358  Sum_probs=38.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR   59 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~   59 (299)
                      |++.|.|+ |-+|..+|..++.+|++|++.+++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            67999999 779999999999999999999999988777666554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.66  E-value=0.011  Score=43.42  Aligned_cols=116  Identities=11%  Similarity=0.106  Sum_probs=71.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSL----GIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .++.|+|+ |.+|..++..|..++.. +++++++++..+....++.+.    +.+..+...+-  .           +.+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------ccc
Confidence            46888896 99999999888877654 999999998877777766543    23444443321  1           123


Q ss_pred             CCccEEEEcCCCCCCCCCC--CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           90 GKLDILVNAAAGNFLVSAE--DLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        90 g~id~lv~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      ..-|++|..+|........  +.+..+   .+..|    ..+.+.+.+.+.+..+      .+.++++|.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~~---l~~~N----~~iv~~i~~~i~~~~p------~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRDD---LLPLN----NKIMIEIGGHIKKNCP------NAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGG---GHHHH----HHHHHHHHHHHHHHCT------TSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccccchhH---HHHHH----HHHHHHHHHHHHhcCC------CeEEEEecC
Confidence            3689999999965432111  112221   23334    3566777777777653      465666554

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.63  E-value=0.003  Score=48.90  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++..    ++.+.+..+   |-.+. ++.+.+.++. .-.+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a----~~~Ga~~~~---~~~~~-~~~~~i~~~t-~g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFEIAD---LSLDT-PLHEQIAALL-GEPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCEEEE---TTSSS-CHHHHHHHHH-SSSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh----hhccccEEE---eCCCc-CHHHHHHHHh-CCCC
Confidence            4889999987 8999888877767787 588888988766543    344543322   22222 2222222221 1246


Q ss_pred             ccEEEEcCCCC
Q 022335           92 LDILVNAAAGN  102 (299)
Q Consensus        92 id~lv~~ag~~  102 (299)
                      +|++|.+.|..
T Consensus        95 ~D~vid~vG~~  105 (195)
T d1kola2          95 VDCAVDAVGFE  105 (195)
T ss_dssp             EEEEEECCCTT
T ss_pred             cEEEEECcccc
Confidence            99999999843

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.59  E-value=0.0021  Score=48.92  Aligned_cols=48  Identities=19%  Similarity=0.297  Sum_probs=41.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRS   60 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~   60 (299)
                      .++||.+||.|+ ||.+++++..|.+.| +|.++.|+.++.+.+.+.+..
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            578999999987 578999999997776 899999999999998888864

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.58  E-value=0.0057  Score=45.69  Aligned_cols=76  Identities=24%  Similarity=0.260  Sum_probs=48.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.++||.|+ |++|...+..+...|++|+++++++++++.+    ++.+.+..+   |-++.+..+    .+.+...+.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~----k~~Ga~~~~---~~~~~~~~~----~~~~~~~~~   94 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA----KELGADLVV---NPLKEDAAK----FMKEKVGGV   94 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH----HHTTCSEEE---CTTTSCHHH----HHHHHHSSE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh----hhcCcceec---ccccchhhh----hcccccCCC
Confidence            3788999875 9999998888888999999999998776543    344544332   222222211    122223456


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      +.+|.+++
T Consensus        95 ~~~v~~~~  102 (168)
T d1rjwa2          95 HAAVVTAV  102 (168)
T ss_dssp             EEEEESSC
T ss_pred             ceEEeecC
Confidence            66666665

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.56  E-value=0.0036  Score=47.44  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE-HAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-~v~~~~~~~~~~~g   90 (299)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++..    ++.+.+..+   |.++.+ .+.+.....  .-+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a----~~lGa~~~i---~~~~~d~~~~~~~~~~--~~~   96 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA----IELGATECL---NPKDYDKPIYEVICEK--TNG   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHTTCSEEE---CGGGCSSCHHHHHHHH--TTS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH----HHcCCcEEE---cCCCchhHHHHHHHHh--cCC
Confidence            4889999986 8999999999989997 588899998877654    334443332   222211 122222222  225


Q ss_pred             CccEEEEcCCC
Q 022335           91 KLDILVNAAAG  101 (299)
Q Consensus        91 ~id~lv~~ag~  101 (299)
                      ++|++|.+.|.
T Consensus        97 G~d~vid~~g~  107 (174)
T d1p0fa2          97 GVDYAVECAGR  107 (174)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEEcCCC
Confidence            79999999883

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.51  E-value=0.0028  Score=48.12  Aligned_cols=41  Identities=17%  Similarity=0.139  Sum_probs=36.6

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVS   56 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~   56 (299)
                      |++.|.|+ |.+|.++|..|+++|++|.+.+|+++..+...+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            68999998 899999999999999999999999887766543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.49  E-value=0.02  Score=42.20  Aligned_cols=104  Identities=13%  Similarity=0.191  Sum_probs=62.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC---------eEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA---------SVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~---------~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .|.|+||+|.+|..++..|+..+.         +++....+.+.++....++.... .....+...-.+.+         
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   76 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV---------   76 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh---------
Confidence            699999999999999999998753         23334455666666666665442 22333332211111         


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKG  140 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~  140 (299)
                        .+...|++|..+|....   ...+.+++   +..|.    ..++.+.+.+.+.
T Consensus        77 --~~~~advViitaG~~~~---pg~~r~dl---~~~N~----~i~~~~~~~i~k~  119 (154)
T d1y7ta1          77 --AFKDADYALLVGAAPRK---AGMERRDL---LQVNG----KIFTEQGRALAEV  119 (154)
T ss_dssp             --HTTTCSEEEECCCCCCC---TTCCHHHH---HHHHH----HHHHHHHHHHHHH
T ss_pred             --hcccccEEEeecCcCCC---CCCcHHHH---HHHHH----HHHHHHHHHHHHh
Confidence              23478999999997532   23344333   33343    4566667777664

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.45  E-value=0.017  Score=43.59  Aligned_cols=79  Identities=16%  Similarity=0.246  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+|+|+|+ |+||...+..+...|++ |++++.++++++..    ++.+.... +...- .++.++......  .-++
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a----~~~Ga~~~-i~~~~-~~~~~~~~~~~~--~~~G   98 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATDC-LNPRE-LDKPVQDVITEL--TAGG   98 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE-ECGGG-CSSCHHHHHHHH--HTSC
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH----HHhCCCcc-cCCcc-chhhhhhhHhhh--hcCC
Confidence            4889999975 99999999998899995 77788888765442    23443332 22111 112223333222  1358


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++|.++|
T Consensus        99 ~d~vie~~G  107 (174)
T d1e3ia2          99 VDYSLDCAG  107 (174)
T ss_dssp             BSEEEESSC
T ss_pred             CcEEEEecc
Confidence            999999998

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.41  E-value=0.0032  Score=47.63  Aligned_cols=79  Identities=18%  Similarity=0.198  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|.|+ +|+|...+..+...|+. |+++++++++++. ..++   +.+..+..-+  ..+.+.+.+....  .++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l---Ga~~~i~~~~--~~~~~~~~~~~~~--~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF---GATECINPQD--FSKPIQEVLIEMT--DGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH---TCSEEECGGG--CSSCHHHHHHHHT--TSC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh---CCcEEEeCCc--hhhHHHHHHHHHc--CCC
Confidence            4889999998 58999999888889976 5566677666443 3333   4333221111  1233333333332  257


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.+.|
T Consensus        99 ~D~vid~~G  107 (176)
T d2fzwa2          99 VDYSFECIG  107 (176)
T ss_dssp             BSEEEECSC
T ss_pred             CcEeeecCC
Confidence            999999988

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.37  E-value=0.0046  Score=47.99  Aligned_cols=43  Identities=16%  Similarity=0.288  Sum_probs=37.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDA   53 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~   53 (299)
                      .+|+||+++|.| .|.+|..+|+.|.+.|++|++.+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            368999999987 7779999999999999999999998866554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.35  E-value=0.0029  Score=48.57  Aligned_cols=83  Identities=17%  Similarity=0.257  Sum_probs=53.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH-----HHc
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTF-----EHF   89 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~-----~~~   89 (299)
                      |++.|.|+ |-+|..+|..++.+|++|++.+++++.++...+.+...-.+  ...-....++........+.     +..
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~   81 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVG--RVDKGRMTPAKMAEVLNGIRPTLSYGDF   81 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHH--HHTTTSSCHHHHHHHHHHEEEESSSTTG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHh--hhcccccchhhhhhhhceeecccccccc
Confidence            46889998 88999999999999999999999998877765555322000  00112334555555554332     112


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      ...|.+|-+..
T Consensus        82 ~~adlViEav~   92 (186)
T d1wdka3          82 GNVDLVVEAVV   92 (186)
T ss_dssp             GGCSEEEECCC
T ss_pred             cccceeeeeec
Confidence            35677776554

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.34  E-value=0.0081  Score=41.87  Aligned_cols=38  Identities=21%  Similarity=0.298  Sum_probs=33.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      +++||++||+|++. +|..-++.|.+.|++|++++....
T Consensus         9 ~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           9 QLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            78999999999865 999999999999999999887553

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.29  E-value=0.0084  Score=44.63  Aligned_cols=83  Identities=16%  Similarity=0.168  Sum_probs=55.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH-------hcCCcEEEEEcCCCCHHHHHHHH---HHHH
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALR-------SLGIKAVGFEGDVRRQEHAKKVV---ESTF   86 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~Dl~~~~~v~~~~---~~~~   86 (299)
                      +-|+|. |-+|..+|+.|+++|++|++.+|+++..+.+.+.-.       +.-.+..++-.-+.+++.+++++   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            566655 899999999999999999999999988777644210       00012333444567788888876   3344


Q ss_pred             HHcCCccEEEEcCC
Q 022335           87 EHFGKLDILVNAAA  100 (299)
Q Consensus        87 ~~~g~id~lv~~ag  100 (299)
                      ....+=+++|.+..
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            44444466776654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.25  E-value=0.095  Score=37.82  Aligned_cols=111  Identities=12%  Similarity=0.069  Sum_probs=70.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHhc----CCcEEEEEc-CCCCHHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALRSL----GIKAVGFEG-DVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~~~-Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+.|+|+ |.+|..+|..|+.+|.  .+++++.+++..+....++.+.    .....+... |.   ++           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~~-----------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---SL-----------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---GG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---HH-----------
Confidence            5778896 9999999999998875  3999999998888776666542    223333332 32   11           


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEecc
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISA  157 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS  157 (299)
                      +..-|++|..+|.....   ..+..   +.+..|    ..+.+.+.+.+.+..+      .+.++++|.
T Consensus        67 ~~~adiVvitag~~~~~---g~~r~---~l~~~n----~~i~~~i~~~i~~~~p------~aivivvtN  119 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKP---GMTRL---DLAHKN----AGIIKDIAKKIVENAP------ESKILVVTN  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCS---SCCHH---HHHHHH----HHHHHHHHHHHHTTST------TCEEEECSS
T ss_pred             hccccEEEEeccccCCC---CCchH---HHHHHh----hHHHHHHHHHHHhhCC------CcEEEEecC
Confidence            23679999999864322   22222   223333    3466677777777653      466666554

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.18  E-value=0.012  Score=45.61  Aligned_cols=77  Identities=26%  Similarity=0.292  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .+++|++||=.|++.|.   ++..++.+|+ +|++++.++..++...+.+...+.+..++..|+...             
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------
Confidence            46789999999998772   3344567786 699999999888888887777788899999996432             


Q ss_pred             cCCccEEEEcCCCC
Q 022335           89 FGKLDILVNAAAGN  102 (299)
Q Consensus        89 ~g~id~lv~~ag~~  102 (299)
                      .+++|+||.|....
T Consensus       107 ~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 NSRVDIVIMNPPFG  120 (201)
T ss_dssp             CCCCSEEEECCCCS
T ss_pred             CCcCcEEEEcCccc
Confidence            35899999998754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.00  E-value=0.0067  Score=48.03  Aligned_cols=49  Identities=20%  Similarity=0.337  Sum_probs=41.0

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      ..+|+|++++|-| .|.+|..+|+.|.+.|++|+.++.+...++....+.
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            3468899999987 578999999999999999999999987776655543

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0061  Score=50.13  Aligned_cols=24  Identities=21%  Similarity=0.189  Sum_probs=21.5

Q ss_pred             CChHHHHHHHHHHHcCCeEEEEeC
Q 022335           23 GSGIGFEISTQFGKHGASVAIMGR   46 (299)
Q Consensus        23 s~giG~aia~~la~~G~~Vv~~~r   46 (299)
                      ||..|.++|++|..+|+.|+++.+
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             chHHHHHHHHHHHHcCCEEEEEec
Confidence            378999999999999999998864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.93  E-value=0.059  Score=39.94  Aligned_cols=82  Identities=10%  Similarity=0.064  Sum_probs=55.7

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHH------------hcCCcEEEEEcCCCCHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRKQVLDAAVSALR------------SLGIKAVGFEGDVRRQEHAKK   80 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~------------~~~~~v~~~~~Dl~~~~~v~~   80 (299)
                      |+++|+|+ |-+|..+|+.|.+.|.  +|++.+++++.++...+.-.            ....++.++.   ..++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            36889975 8999999999999996  58889999887766544210            0012233322   34677888


Q ss_pred             HHHHHHHHcCCccEEEEcCC
Q 022335           81 VVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        81 ~~~~~~~~~g~id~lv~~ag  100 (299)
                      +++++...+..=.+++...+
T Consensus        78 vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCS
T ss_pred             hhhhhhcccccccccccccc
Confidence            88888777655556666655

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.58  E-value=0.0057  Score=45.01  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR   47 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~   47 (299)
                      .|+||++||+|| |.+|..-++.|.+.|++|.+++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            589999999999 559999999999999999998653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.44  E-value=0.19  Score=36.63  Aligned_cols=105  Identities=14%  Similarity=0.171  Sum_probs=59.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGA-------SVAIMGRRK--QVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      .|.|+||+|.+|.+++..|+..+.       .+++.+.+.  ..++.+..++.... .....+..- ++.+         
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~---------   74 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DKEE---------   74 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SCHH---------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC-cccc---------
Confidence            699999999999999999987543       366666554  33444444444332 222222211 1111         


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGG  141 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~  141 (299)
                       +.+...|++|..+|.......   +.++   .++.|.    ..++.+.+.+.+..
T Consensus        75 -~~~~~~dvVVitag~~~~~g~---sr~d---ll~~N~----~i~k~~~~~i~k~a  119 (154)
T d5mdha1          75 -IAFKDLDVAILVGSMPRRDGM---ERKD---LLKANV----KIFKCQGAALDKYA  119 (154)
T ss_dssp             -HHTTTCSEEEECCSCCCCTTC---CTTT---THHHHH----HHHHHHHHHHHHHS
T ss_pred             -cccCCceEEEEecccCCCCCC---chhH---HHHHhH----HHHHHHHHHHHhhC
Confidence             113378999999996543221   1121   233333    56677777776643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.40  E-value=0.055  Score=39.96  Aligned_cols=84  Identities=14%  Similarity=0.137  Sum_probs=54.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-------HhcCCcEEEEEcCCCCHHHHHHHHHH---H
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL-------RSLGIKAVGFEGDVRRQEHAKKVVES---T   85 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~Dl~~~~~v~~~~~~---~   85 (299)
                      +|.|+ |.|-+|.++|+.|+++|++|.+.+|+.+..+.+...-       .+......++..-+.+.+.++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            46666 4589999999999999999999999988776654322       11111233444556677777777653   3


Q ss_pred             HHHcCCccEEEEcCC
Q 022335           86 FEHFGKLDILVNAAA  100 (299)
Q Consensus        86 ~~~~g~id~lv~~ag  100 (299)
                      .....+=+++|.+..
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            344433456776654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.29  E-value=0.27  Score=36.31  Aligned_cols=119  Identities=18%  Similarity=0.186  Sum_probs=67.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc-----CCeEEEEeCChhHHHHHHHHHHhc----CCcEEEE-EcCCCCHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKH-----GASVAIMGRRKQVLDAAVSALRSL----GIKAVGF-EGDVRRQEHAKKVVE   83 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~-----G~~Vv~~~r~~~~~~~~~~~~~~~----~~~v~~~-~~Dl~~~~~v~~~~~   83 (299)
                      ...+.|.||++.....+...+..+     +..++++|.++++++.....+...    +....+. ..|   .   ++.  
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~---~ea--   74 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTD---P---EEA--   74 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESC---H---HHH--
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCC---h---hhc--
Confidence            346788888765433444444443     236999999999887655554332    3333333 223   1   122  


Q ss_pred             HHHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhh----------------HHHHHHHHHHHHHHHhcCCCCCCC
Q 022335           84 STFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDS----------------VGTFTMCHEALKYLKKGGPGRSSA  147 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~----------------~~~~~l~~~~~~~m~~~~~~~~~~  147 (299)
                           +..-|+||+.+|....      +...-++.+..|+                .-..-.++.+.+.+++..+     
T Consensus        75 -----l~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P-----  138 (167)
T d1u8xx1          75 -----FTDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP-----  138 (167)
T ss_dssp             -----HSSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-----
T ss_pred             -----cCCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCC-----
Confidence                 2378999999986432      1122223333331                2234556777788888764     


Q ss_pred             CCceEEEecc
Q 022335          148 GGGSILNISA  157 (299)
Q Consensus       148 ~~g~iv~vsS  157 (299)
                       .+-++++|.
T Consensus       139 -~A~li~~TN  147 (167)
T d1u8xx1         139 -DAWMLNYSN  147 (167)
T ss_dssp             -TCEEEECCS
T ss_pred             -CeEEEEeCC
Confidence             566766665

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.011  Score=43.82  Aligned_cols=33  Identities=24%  Similarity=0.148  Sum_probs=30.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      +++|.|+ |.+|..++..|++.|++|.+++|++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~   34 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence            6899998 99999999999999999999999875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.22  E-value=0.1  Score=38.99  Aligned_cols=82  Identities=21%  Similarity=0.169  Sum_probs=55.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC------------------CcEEEEEcCCCCHHHH
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG------------------IKAVGFEGDVRRQEHA   78 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~------------------~~v~~~~~Dl~~~~~v   78 (299)
                      +-|+ |.|-+|.+++++|+++|++|.+.+|++++.+.+.++-....                  .+...+..-+.....+
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            4444 56889999999999999999999999998888766532111                  1112233334455666


Q ss_pred             HHHHHHHHHHcCCccEEEEcC
Q 022335           79 KKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~a   99 (299)
                      ...+......+..=+++|+..
T Consensus        83 ~~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhhccccceecccC
Confidence            666676666665556666654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.18  E-value=0.042  Score=43.61  Aligned_cols=81  Identities=16%  Similarity=0.263  Sum_probs=55.5

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCCcEEEEEc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGIKAVGFEG   70 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~~v~~~~~   70 (299)
                      .|++++|+|.| .||+|..++..|+..|.. +.++|.+                   ..+.+.+++.+.+.+.++.+...
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            46788999999 578999999999999986 7788753                   23667777778776655444443


Q ss_pred             CCC-CHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           71 DVR-RQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        71 Dl~-~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      +.. +.+.......       ..|++|.+.
T Consensus       106 ~~~~~~~~~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         106 NALLDDAELAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             CSCCCHHHHHHHHH-------TSSEEEECC
T ss_pred             hhhhhhcccccccc-------ccceeeecc
Confidence            332 2333333333       678888764

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.10  E-value=0.069  Score=42.66  Aligned_cols=74  Identities=26%  Similarity=0.344  Sum_probs=57.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ..|++||=.|+++|+   ++..+++.|++|+.++.++..++...+..+..+.++.++..|+.+      .     -..++
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~-----~~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------A-----LPFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------H-----GGGCC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------c-----ccccc
Confidence            468999999999986   334567889999999999999998888887777778888877421      1     12368


Q ss_pred             ccEEEEcC
Q 022335           92 LDILVNAA   99 (299)
Q Consensus        92 id~lv~~a   99 (299)
                      +|+++.|.
T Consensus       185 fD~V~ani  192 (254)
T d2nxca1         185 FDLLVANL  192 (254)
T ss_dssp             EEEEEEEC
T ss_pred             cchhhhcc
Confidence            99999873

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.10  E-value=0.048  Score=40.69  Aligned_cols=80  Identities=14%  Similarity=0.213  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+++|.|+ +|+|...+..+...|+. |+++++++++++..    ++.+.+..+..-+-.+  .+++......  -++
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a----~~~GAd~~in~~~~~~--~~~~~~~~~~--~~G   98 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATDFVNPNDHSE--PISQVLSKMT--NGG   98 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCEEECGGGCSS--CHHHHHHHHH--TSC
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH----HHcCCcEEEcCCCcch--hHHHHHHhhc--cCC
Confidence            4889999986 66788777778887775 77888888776553    3445433322222111  1222222221  247


Q ss_pred             ccEEEEcCCC
Q 022335           92 LDILVNAAAG  101 (299)
Q Consensus        92 id~lv~~ag~  101 (299)
                      +|+++.+.|.
T Consensus        99 ~d~vid~~G~  108 (175)
T d1cdoa2          99 VDFSLECVGN  108 (175)
T ss_dssp             BSEEEECSCC
T ss_pred             cceeeeecCC
Confidence            9999999983

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.03  E-value=0.027  Score=41.26  Aligned_cols=42  Identities=17%  Similarity=0.244  Sum_probs=35.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      ++.++|+ |.+|.++++.|.+.| ++|++.+|++++.+.+.++.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            4778877 999999999999887 88999999998877766543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.97  E-value=0.24  Score=36.56  Aligned_cols=79  Identities=20%  Similarity=0.175  Sum_probs=58.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ....+++|.|+ |-.|+..++.....|++|.++|.+.+.++++......   ++.++   .++.+.+++.+.       .
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~~~---~~~~~~l~~~~~-------~   95 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVELL---YSNSAEIETAVA-------E   95 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEEE---ECCHHHHHHHHH-------T
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cceee---hhhhhhHHHhhc-------c
Confidence            34667889887 4578888888899999999999999988887665533   23332   456666666555       6


Q ss_pred             ccEEEEcCCCCCC
Q 022335           92 LDILVNAAAGNFL  104 (299)
Q Consensus        92 id~lv~~ag~~~~  104 (299)
                      -|++|..+-+...
T Consensus        96 aDivI~aalipG~  108 (168)
T d1pjca1          96 ADLLIGAVLVPGR  108 (168)
T ss_dssp             CSEEEECCCCTTS
T ss_pred             CcEEEEeeecCCc
Confidence            7999999876543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.11  Score=35.72  Aligned_cols=70  Identities=16%  Similarity=0.249  Sum_probs=54.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +.++.|.| +|-+|+-++....+.|.+|++++.+++.-        ....--.++..|..|.+.+.+++...     .+|
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~P--------A~~va~~~i~~~~~d~~~l~~~~~~~-----~~D   76 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAP--------AMHVAHRSHVINMLDGDALRRVVELE-----KPH   76 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCG--------GGGGSSEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCc--------hhhcCCeEEECCCCCHHHHHHHHHhh-----CCc
Confidence            55799998 67999999999999999999999876420        11111356788999999999988754     689


Q ss_pred             EEEE
Q 022335           94 ILVN   97 (299)
Q Consensus        94 ~lv~   97 (299)
                      ++.+
T Consensus        77 viT~   80 (111)
T d1kjqa2          77 YIVP   80 (111)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            8865

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.89  E-value=0.018  Score=44.36  Aligned_cols=72  Identities=19%  Similarity=0.167  Sum_probs=53.5

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .++.|++||=.|+++|+   ++..++..|+. |+.++.++..++...+    ...++.++.+|+.+.             
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~----N~~~~~~~~~D~~~l-------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKR----NCGGVNFMVADVSEI-------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHH----HCTTSEEEECCGGGC-------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHH----ccccccEEEEehhhc-------------
Confidence            46889999999999883   34456777765 9999999876655433    234688999998532             


Q ss_pred             cCCccEEEEcCCC
Q 022335           89 FGKLDILVNAAAG  101 (299)
Q Consensus        89 ~g~id~lv~~ag~  101 (299)
                      .+++|+||.|..+
T Consensus       105 ~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 SGKYDTWIMNPPF  117 (197)
T ss_dssp             CCCEEEEEECCCC
T ss_pred             CCcceEEEeCccc
Confidence            2589999999764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.87  E-value=0.038  Score=41.84  Aligned_cols=38  Identities=24%  Similarity=0.407  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ..+.||++.|.|.+. ||+.+++.+...|++|+..++.+
T Consensus        38 ~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          38 PLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CcccCceEEEecccc-ccccceeeeeccccccccccccc
Confidence            358899999999866 99999999999999999999875

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.84  E-value=0.037  Score=39.36  Aligned_cols=73  Identities=18%  Similarity=0.156  Sum_probs=54.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++.|.|++|..|+.++..+.++|+.++. ++++...      ++  ...+   +-.|+|.++.+.+.++.+.+.  ++-+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~--~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~   68 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------EL--DSPD---VVIDFSSPEALPKTVDLCKKY--RAGL   68 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------EC--SCCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hh--ccCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence            5899999999999999999999999764 4554321      00  0122   356999999999999988776  5667


Q ss_pred             EEEcCCC
Q 022335           95 LVNAAAG  101 (299)
Q Consensus        95 lv~~ag~  101 (299)
                      |+-..|+
T Consensus        69 ViGTTG~   75 (128)
T d1vm6a3          69 VLGTTAL   75 (128)
T ss_dssp             EECCCSC
T ss_pred             EEEcCCC
Confidence            7777774

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.78  E-value=0.05  Score=42.91  Aligned_cols=74  Identities=16%  Similarity=0.171  Sum_probs=59.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +++++|=.||+.|   .++..|+++|++|++++.++.-++.+.+.....+.++.++..|+.+..-           -+.+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            4678999999987   4566789999999999999999888888888777789999999865321           1478


Q ss_pred             cEEEEcCC
Q 022335           93 DILVNAAA  100 (299)
Q Consensus        93 d~lv~~ag  100 (299)
                      |.+++..+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98888644

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.69  E-value=0.027  Score=41.92  Aligned_cols=40  Identities=18%  Similarity=0.187  Sum_probs=35.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV   50 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~   50 (299)
                      .+.||.++|.|-|.-+|+-++..|.++|++|..+......
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~   73 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN   73 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccch
Confidence            5789999999999999999999999999999888765543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=94.69  E-value=0.19  Score=39.99  Aligned_cols=35  Identities=17%  Similarity=0.354  Sum_probs=31.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR   46 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r   46 (299)
                      .|+|++++|.| .|.+|..+++.|.+.|++|+.++-
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            57899999998 699999999999999999987753

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.67  E-value=0.021  Score=40.61  Aligned_cols=70  Identities=17%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEE
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDIL   95 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   95 (299)
                      -++|.|. +.+|+.+++.|  +|..|++++.+++..+..    ...  .+.++..|.++++.++++-      ..+.+.+
T Consensus         2 HivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~~--~~~~i~Gd~~~~~~L~~a~------i~~A~~v   66 (129)
T d2fy8a1           2 HVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LRS--GANFVHGDPTRVSDLEKAN------VRGARAV   66 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HHT--TCEEEESCTTSHHHHHHTT------CTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hhc--CccccccccCCHHHHHHhh------hhcCcEE
Confidence            4677775 78999999998  456788899988765543    222  4778899999998876641      2467788


Q ss_pred             EEcCC
Q 022335           96 VNAAA  100 (299)
Q Consensus        96 v~~ag  100 (299)
                      |....
T Consensus        67 i~~~~   71 (129)
T d2fy8a1          67 IVNLE   71 (129)
T ss_dssp             EECCS
T ss_pred             EEecc
Confidence            87653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.022  Score=42.69  Aligned_cols=41  Identities=17%  Similarity=0.235  Sum_probs=36.9

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVL   51 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~   51 (299)
                      +++||.++|.|-|.-+|+-++.-|+++|++|..+......+
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            57899999999999999999999999999999988766443

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.60  E-value=0.036  Score=41.79  Aligned_cols=77  Identities=13%  Similarity=0.069  Sum_probs=55.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL-------------GIKAVGFEGDVRRQEHA   78 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-------------~~~v~~~~~Dl~~~~~v   78 (299)
                      ..|.+||..||+.|   ..+..|+++|++|+.++.++..++...+..+..             +..+.++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            35889999999988   467789999999999999999888877766432             22346777777764431


Q ss_pred             HHHHHHHHHHcCCccEEEEcCC
Q 022335           79 KKVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ..         ..+|.++....
T Consensus        96 ~~---------~~~D~i~~~~~  108 (201)
T d1pjza_          96 DI---------GHCAAFYDRAA  108 (201)
T ss_dssp             HH---------HSEEEEEEESC
T ss_pred             cc---------cceeEEEEEee
Confidence            11         26787776544

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.60  E-value=0.073  Score=43.28  Aligned_cols=36  Identities=17%  Similarity=0.261  Sum_probs=32.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR   46 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r   46 (299)
                      ..|+|++++|.|- |.+|..+|+.|.+.|++|+.++-
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            3688999999886 79999999999999999998763

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.59  E-value=0.18  Score=37.84  Aligned_cols=75  Identities=21%  Similarity=0.322  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .|.++|=.|++.|   .++..|++.+.+|+.++.+++.++...+.++..+  .++.++.+|.          .+......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda----------~~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA----------PEALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH----------HHHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECch----------hhcccccC
Confidence            4788999999887   4455667788899999999999999988888775  4899999984          22223346


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            8999988753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.51  E-value=0.033  Score=44.06  Aligned_cols=75  Identities=17%  Similarity=0.128  Sum_probs=61.1

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.++++|=.||+.|.   ++..|+++|.+|+.++.+++.++...+.....+.++.++..|+.+.+           ..++
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~~  101 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INRK  101 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSCC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------cccc
Confidence            457889999999885   78889999999999999999888888777777778999999986532           1247


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|++++..+
T Consensus       102 fD~i~~~~~  110 (246)
T d1y8ca_         102 FDLITCCLD  110 (246)
T ss_dssp             EEEEEECTT
T ss_pred             ccccceeee
Confidence            999987644

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.42  E-value=0.012  Score=50.98  Aligned_cols=78  Identities=15%  Similarity=0.265  Sum_probs=52.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHhcCC--cEEEEE
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRR-------------------KQVLDAAVSALRSLGI--KAVGFE   69 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~v~~~~   69 (299)
                      |++.+|||.|+ ||+|..+++.|+..|.. +.++|.+                   ..+.+.+++.+.+.+.  ++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            45678999999 67999999999999984 8888763                   2256666666766543  455555


Q ss_pred             cCCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 022335           70 GDVRRQEHAKKVVESTFEHFGKLDILVNAA   99 (299)
Q Consensus        70 ~Dl~~~~~v~~~~~~~~~~~g~id~lv~~a   99 (299)
                      .++.+..  ..+       +.++|+||++.
T Consensus       114 ~~i~~~~--~~~-------~~~~DlVi~~~  134 (426)
T d1yovb1         114 NKIQDFN--DTF-------YRQFHIIVCGL  134 (426)
T ss_dssp             SCGGGBC--HHH-------HTTCSEEEECC
T ss_pred             ccccchH--HHH-------HHhcchheecc
Confidence            5554322  122       23678777664

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.33  E-value=0.062  Score=39.70  Aligned_cols=39  Identities=28%  Similarity=0.404  Sum_probs=35.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV   50 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~   50 (299)
                      .|.||+++|.|-+ -||+.+|+.|...|++|++++.++..
T Consensus        21 ~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccch
Confidence            5789999999865 89999999999999999999999843

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.22  E-value=0.042  Score=39.45  Aligned_cols=76  Identities=8%  Similarity=0.086  Sum_probs=53.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCeEEE-EeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           16 VALITGGGSGIGFEISTQFGKH-GASVAI-MGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~-G~~Vv~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ++.|.|++|..|+.+++...+. ++.++. +++.+.. .    .+...+.+   +-.|+|.++.+.+.++.+.+.  ++-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~-~----~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL-S----LLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT-H----HHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch-h----hhccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            4889999999999999987664 666553 5554321 1    12222223   456999999999999988775  666


Q ss_pred             EEEEcCCC
Q 022335           94 ILVNAAAG  101 (299)
Q Consensus        94 ~lv~~ag~  101 (299)
                      +|+-..|+
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            77777774

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.16  E-value=0.12  Score=40.02  Aligned_cols=78  Identities=21%  Similarity=0.255  Sum_probs=62.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+||.+|+++|--.++..+++  |.+|+.+.++++-.+...+.+...+ .++.++..|..+-          ....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence            47789999999998888887776  5679999999988888888887776 5799999997631          122468


Q ss_pred             ccEEEEcCCCC
Q 022335           92 LDILVNAAAGN  102 (299)
Q Consensus        92 id~lv~~ag~~  102 (299)
                      +|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999888754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.11  E-value=0.066  Score=39.11  Aligned_cols=41  Identities=15%  Similarity=0.094  Sum_probs=34.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSAL   58 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~   58 (299)
                      +.|+ |.|.+|.++++.|.+.|+++++.+|+.++.+++.++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            5555 5688999999999999999999999998877776655

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.09  E-value=0.15  Score=35.15  Aligned_cols=34  Identities=29%  Similarity=0.539  Sum_probs=29.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .+.++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            367888876 6899999999999999999998865

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.06  E-value=0.38  Score=34.31  Aligned_cols=87  Identities=9%  Similarity=0.011  Sum_probs=56.8

Q ss_pred             CCCEEEEecCC---ChHHHHHHHHHHHcCCeEEEEeCChhHHH--HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGG---SGIGFEISTQFGKHGASVAIMGRRKQVLD--AAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        13 ~~k~vlItGas---~giG~aia~~la~~G~~Vv~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +-|++.|+|+|   +..|..+++.|.++|++|+.+..+.....  .+...+.+....+..+. =+..++.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~-i~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVD-LFVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEE-ECSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEE-EEeCHHHHHHHHHHHHH
Confidence            57899999999   67999999999999999998876532211  11112222222222111 12457788888888877


Q ss_pred             HcCCccEEEEcCCCC
Q 022335           88 HFGKLDILVNAAAGN  102 (299)
Q Consensus        88 ~~g~id~lv~~ag~~  102 (299)
                      .  ++..++...|..
T Consensus        97 ~--g~k~v~~~~G~~  109 (139)
T d2d59a1          97 K--GAKVVWFQYNTY  109 (139)
T ss_dssp             H--TCSEEEECTTCC
T ss_pred             h--CCCEEEEecccc
Confidence            5  577888877743

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.04  E-value=0.26  Score=40.48  Aligned_cols=82  Identities=17%  Similarity=0.161  Sum_probs=58.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      .+|++||=.++..| |.++  +++..+++|+.++.++..++...+.+...+ .++.++..|..+      +.+.....-.
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~~  214 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEGE  214 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTTC
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhhc
Confidence            56889988887654 2333  345567789999999999999888887766 368889888643      2333333446


Q ss_pred             CccEEEEcCCCC
Q 022335           91 KLDILVNAAAGN  102 (299)
Q Consensus        91 ~id~lv~~ag~~  102 (299)
                      ++|.||.+....
T Consensus       215 ~fD~Vi~DpP~~  226 (318)
T d1wxxa2         215 RFDLVVLDPPAF  226 (318)
T ss_dssp             CEEEEEECCCCS
T ss_pred             CCCEEEEcCCcc
Confidence            899999997643

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.00  E-value=0.035  Score=42.37  Aligned_cols=41  Identities=15%  Similarity=0.261  Sum_probs=34.0

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVS   56 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~   56 (299)
                      +++.|.|++ ..|.++|..|++.|++|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            468888875 48999999999999999999999876665443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.92  E-value=0.18  Score=35.14  Aligned_cols=34  Identities=26%  Similarity=0.454  Sum_probs=29.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      +++++|.|| |-+|..+|..|+++|.+|.++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            677877765 7899999999999999999998865

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.75  E-value=0.066  Score=41.03  Aligned_cols=41  Identities=17%  Similarity=0.168  Sum_probs=35.4

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      ....|.||++.|.|. |.||+.+|+.|...|++|+..++...
T Consensus        37 ~g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          37 IGREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CBCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cCccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            345689999999985 78999999999999999999987654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.74  E-value=0.09  Score=40.06  Aligned_cols=83  Identities=17%  Similarity=0.134  Sum_probs=62.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +.++=+|-|+||...++...+ . +.+|+++|++++.++...+.+...+.++.+++.++++...+..-.     ..+.+|
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~-----~~~~vd   97 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTL-----GIEKVD   97 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHT-----TCSCEE
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHc-----CCCCcc
Confidence            344446777788888888776 3 578999999999999888888777889999999998755432211     135899


Q ss_pred             EEEEcCCCCC
Q 022335           94 ILVNAAAGNF  103 (299)
Q Consensus        94 ~lv~~ag~~~  103 (299)
                      .++.-.|++.
T Consensus        98 gIl~DlGvSs  107 (192)
T d1m6ya2          98 GILMDLGVST  107 (192)
T ss_dssp             EEEEECSCCH
T ss_pred             eeeeccchhH
Confidence            9999999753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.66  E-value=0.052  Score=42.48  Aligned_cols=77  Identities=13%  Similarity=0.072  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhc------------------CCcEEEEEcCCCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSL------------------GIKAVGFEGDVRR   74 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~------------------~~~v~~~~~Dl~~   74 (299)
                      .+.+||..||+.|   ..+..|+++|++|+.++-++..++...++....                  +.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            5789999999987   557889999999999999998887766654321                  2467888888764


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcCCC
Q 022335           75 QEHAKKVVESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        75 ~~~v~~~~~~~~~~~g~id~lv~~ag~  101 (299)
                      ...         ...+.+|+++.....
T Consensus       122 l~~---------~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGG---------SCCCCEEEEEESSST
T ss_pred             ccc---------cccCceeEEEEEEEE
Confidence            321         112457777665544

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.62  E-value=0.19  Score=38.79  Aligned_cols=80  Identities=19%  Similarity=0.267  Sum_probs=59.6

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .|.+||-+|+++|--.++..++.....+|+.++.+++..+...+.++..+ .++.++..|..+.          ....+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~----------~~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----------VPEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc----------cccccc
Confidence            37899999999887766665566666789999999999888888887664 4677888776531          112357


Q ss_pred             ccEEEEcCCCC
Q 022335           92 LDILVNAAAGN  102 (299)
Q Consensus        92 id~lv~~ag~~  102 (299)
                      +|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999888753

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.57  E-value=0.55  Score=33.77  Aligned_cols=78  Identities=12%  Similarity=0.182  Sum_probs=55.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .++|+++|=.|+++|   ++..+.+.+|+ +|+.++.++...+.+.+.+...+  .++.+++.|..+      ++.   .
T Consensus        12 ~~~g~~vlDl~~GtG---~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~   79 (152)
T d2esra1          12 YFNGGRVLDLFAGSG---GLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---C   79 (152)
T ss_dssp             CCCSCEEEEETCTTC---HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---H
T ss_pred             hCCCCeEEEcCCccC---HHHHHHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---c
Confidence            467999998888766   23334567887 59999999998888888777654  468999988432      222   2


Q ss_pred             HcCCccEEEEcCC
Q 022335           88 HFGKLDILVNAAA  100 (299)
Q Consensus        88 ~~g~id~lv~~ag  100 (299)
                      ..+++|+++.++.
T Consensus        80 ~~~~fDiIf~DPP   92 (152)
T d2esra1          80 LTGRFDLVFLDPP   92 (152)
T ss_dssp             BCSCEEEEEECCS
T ss_pred             cccccceeEechh
Confidence            2457999988754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.15  Score=35.67  Aligned_cols=34  Identities=24%  Similarity=0.375  Sum_probs=29.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .|.++|.||+ -||..+|..|++.|.+|.++.|.+
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            3678888875 699999999999999999999863

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.52  E-value=0.14  Score=35.76  Aligned_cols=34  Identities=26%  Similarity=0.475  Sum_probs=29.4

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .|.++|.|| |-||..+|..|++.|.+|.++.+++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            367888875 6899999999999999999998865

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.52  E-value=0.19  Score=38.49  Aligned_cols=75  Identities=16%  Similarity=0.050  Sum_probs=58.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      +.+||=.||+.|.   ++..|++.|++|++++.++..++...+.....+.++.++..|+.+..          -..+.+|
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~fD  104 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKTFD  104 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTCEE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc----------ccCcCce
Confidence            4578999999886   66788899999999999999888888777777777888888877532          0114789


Q ss_pred             EEEEcCCC
Q 022335           94 ILVNAAAG  101 (299)
Q Consensus        94 ~lv~~ag~  101 (299)
                      +|+++..+
T Consensus       105 ~I~~~~~l  112 (226)
T d1ve3a1         105 YVIFIDSI  112 (226)
T ss_dssp             EEEEESCG
T ss_pred             EEEEecch
Confidence            98887654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=93.43  E-value=0.5  Score=34.85  Aligned_cols=80  Identities=14%  Similarity=0.113  Sum_probs=53.4

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .+|.++|=.|+++|.   ++.+.+.+|++|++++.++...+.+.+.++..+.+..++..|.   +.   +.........+
T Consensus        40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~---~~~~~~~~~~~  110 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EV---FLPEAKAQGER  110 (171)
T ss_dssp             TTCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HH---HHHHHHHTTCC
T ss_pred             cCCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hc---ccccccccCCc
Confidence            357778777776652   4445677899999999999998888888877665444444332   11   22223333457


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      +|+++.+..
T Consensus       111 fD~If~DPP  119 (171)
T d1ws6a1         111 FTVAFMAPP  119 (171)
T ss_dssp             EEEEEECCC
T ss_pred             cceeEEccc
Confidence            999998864

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.40  E-value=0.2  Score=34.91  Aligned_cols=35  Identities=23%  Similarity=0.395  Sum_probs=30.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ++|+++|.| +|.+|..+|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            467888885 46999999999999999999998754

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.36  E-value=0.074  Score=39.71  Aligned_cols=40  Identities=18%  Similarity=0.296  Sum_probs=35.9

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRR   47 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~   47 (299)
                      ...+++||.++|.|-|.=+|+-++..|+++|+.|..+..+
T Consensus        23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            3447999999999999999999999999999999887764

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.35  E-value=0.55  Score=32.18  Aligned_cols=82  Identities=18%  Similarity=0.168  Sum_probs=58.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ||++||.--...+-..+...|.+.|++|+..+.+...   ..+.+++...++.++-.++-+.+ --+++.++++....+-
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~~dliilD~~mp~~~-G~e~~~~ir~~~~~~p   76 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELKPDIVTMDITMPEMN-GIDAIKEIMKIDPNAK   76 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHCCSEEEEECSCGGGC-HHHHHHHHHHHCTTCC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhccCCEEEEecCCCCCC-HHHHHHHHHHhCCCCc
Confidence            7899999999999999999999999999877666533   33334444556666655555554 4566777877777777


Q ss_pred             EEEEcC
Q 022335           94 ILVNAA   99 (299)
Q Consensus        94 ~lv~~a   99 (299)
                      +++..+
T Consensus        77 vi~ls~   82 (118)
T d1u0sy_          77 IIVCSA   82 (118)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            776654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.2  Score=41.00  Aligned_cols=75  Identities=25%  Similarity=0.315  Sum_probs=53.1

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      .++|++||-.|++.|+   ++..++++|+ +|++++.++.. ....+.....  ..++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            4679999999999886   5667788897 58889888754 3334444433  3579999998876421          


Q ss_pred             HcCCccEEEEcC
Q 022335           88 HFGKLDILVNAA   99 (299)
Q Consensus        88 ~~g~id~lv~~a   99 (299)
                      ...++|++|...
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            124799999864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.24  E-value=0.083  Score=39.95  Aligned_cols=42  Identities=19%  Similarity=0.186  Sum_probs=36.1

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV   50 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~   50 (299)
                      ....+.||++.|.| .|.||+.+++.+...|++|+..++....
T Consensus        38 ~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          38 SGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            44568899999998 6899999999999999999999987643

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.22  E-value=0.41  Score=39.37  Aligned_cols=79  Identities=18%  Similarity=0.125  Sum_probs=55.9

Q ss_pred             CCEEEEecCCC-hHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           14 GKVALITGGGS-GIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        14 ~k~vlItGas~-giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |++||=.++.. +++.+    ++..|+ +|+.++.++..++...+.+...+  .++.++..|+.      +.........
T Consensus       146 g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~~  215 (324)
T d2as0a2         146 GDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKKG  215 (324)
T ss_dssp             TCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHTT
T ss_pred             CCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhcc
Confidence            78888888754 44433    445676 59999999999888888877665  36888888854      2333344444


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      .++|+||.++...
T Consensus       216 ~~fD~Vi~DpP~~  228 (324)
T d2as0a2         216 EKFDIVVLDPPAF  228 (324)
T ss_dssp             CCEEEEEECCCCS
T ss_pred             CCCCchhcCCccc
Confidence            6899999997643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.20  E-value=0.2  Score=34.61  Aligned_cols=34  Identities=24%  Similarity=0.264  Sum_probs=29.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .|+++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            467777775 6899999999999999999999854

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.11  E-value=0.13  Score=37.39  Aligned_cols=35  Identities=17%  Similarity=0.239  Sum_probs=29.2

Q ss_pred             CCEEEEe-cCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALIT-GGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlIt-Gas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ++.++|. .+++-||..+|..|+++|++|.++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            5555555 4678999999999999999999998864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.08  E-value=0.1  Score=39.83  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=34.9

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      ...+.||++.|.| -|.||+.+++.+...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            4568999999996 578999999999999999999998654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.89  E-value=0.033  Score=42.09  Aligned_cols=75  Identities=15%  Similarity=0.211  Sum_probs=46.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCc----EEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIK----AVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~----v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      .+.|.|+ |..|.++|..|++.|++|.+.+|..+.  +..+.+...+.+    ......++.-.++.+++++       .
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~   71 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE-------N   71 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT-------T
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhhhhhhhhcchhccccccccccHHHHHh-------c
Confidence            5778876 789999999999999999999986542  344555433211    1111112222344444443       5


Q ss_pred             ccEEEEcCC
Q 022335           92 LDILVNAAA  100 (299)
Q Consensus        92 id~lv~~ag  100 (299)
                      .|++|....
T Consensus        72 ad~Ii~avp   80 (180)
T d1txga2          72 AEVVLLGVS   80 (180)
T ss_dssp             CSEEEECSC
T ss_pred             cchhhcccc
Confidence            788888653

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.75  E-value=0.49  Score=37.85  Aligned_cols=77  Identities=17%  Similarity=0.192  Sum_probs=54.6

Q ss_pred             CEEEEecCCChH-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           15 KVALITGGGSGI-GFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        15 k~vlItGas~gi-G~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      ++++-.|+++|+ +.+++ +  ...++|++++.++..++-..+..+..+  .++.++..|+.+.         ....+++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            456656666664 44443 2  356889999999999888888887665  3677888888643         2233478


Q ss_pred             ccEEEEcCCCCC
Q 022335           92 LDILVNAAAGNF  103 (299)
Q Consensus        92 id~lv~~ag~~~  103 (299)
                      +|++|.|..+..
T Consensus       180 fDlIVsNPPYI~  191 (271)
T d1nv8a_         180 IEMILSNPPYVK  191 (271)
T ss_dssp             CCEEEECCCCBC
T ss_pred             ccEEEEcccccC
Confidence            999999998654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.53  E-value=0.45  Score=35.76  Aligned_cols=78  Identities=14%  Similarity=0.120  Sum_probs=58.3

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .+++.+||=.|++.|.   .+..|+++|++|+.++.++..++.+.+.....+. ++.+...|+.+..-           -
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------C
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------c
Confidence            3456789999997653   5668899999999999999988888777766653 57888888775321           1


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      +.+|+++.+.-+.
T Consensus        94 ~~fD~I~~~~~~~  106 (198)
T d2i6ga1          94 GEYDFILSTVVMM  106 (198)
T ss_dssp             CCEEEEEEESCGG
T ss_pred             ccccEEEEeeeee
Confidence            4789998876543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.46  E-value=0.38  Score=35.94  Aligned_cols=83  Identities=19%  Similarity=0.069  Sum_probs=51.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHH---------------HH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQE---------------HA   78 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---------------~v   78 (299)
                      .-.++|.|+ |-.|...++.....|++|.++|.+.+.++++.+..    .  .++..+..+.+               ..
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~----~--~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG----G--KFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT----C--EECCC-----------------------
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh----c--ceEEEeccccccccccccchhhcCHHHH
Confidence            446888886 46788888888899999999999988777654432    1  11222211111               11


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCCC
Q 022335           79 KKVVESTFEHFGKLDILVNAAAGNF  103 (299)
Q Consensus        79 ~~~~~~~~~~~g~id~lv~~ag~~~  103 (299)
                      +..-+.+.+...+-|++|..+-+..
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCC
Confidence            2223334444568899999987654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.42  E-value=0.092  Score=41.34  Aligned_cols=34  Identities=15%  Similarity=0.138  Sum_probs=29.6

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEe
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGK-HGASVAIMG   45 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~-~G~~Vv~~~   45 (299)
                      +++|++++|-| .|.+|..+++.|++ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            57899999886 89999999999985 599998776

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.41  E-value=0.32  Score=33.58  Aligned_cols=34  Identities=21%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .+.++|.|| |-||..+|..|++.|.+|.++.+.+
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            467888875 6899999999999999999988754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.20  E-value=0.09  Score=41.63  Aligned_cols=35  Identities=26%  Similarity=0.286  Sum_probs=31.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeC
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGR   46 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r   46 (299)
                      +|+|++++|-| .|.+|..+|+.|.+.|++|+.++.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            68899999997 889999999999999999987764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.17  E-value=0.49  Score=32.41  Aligned_cols=36  Identities=22%  Similarity=0.400  Sum_probs=30.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ..++.++|.|| |-+|..+|..|++.|.+|.++.+.+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            34788887775 7899999999999999999998864

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.03  E-value=0.37  Score=37.38  Aligned_cols=80  Identities=24%  Similarity=0.214  Sum_probs=61.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG------IKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~------~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .|.+||-+|+++|--.++..++.....+|+.++++++-.+...+.+++.+      .++.+...|....          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence            37799999999998888888888888899999999988888777776432      4678888886421          1


Q ss_pred             HHcCCccEEEEcCCCC
Q 022335           87 EHFGKLDILVNAAAGN  102 (299)
Q Consensus        87 ~~~g~id~lv~~ag~~  102 (299)
                      ...+.+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1235799999988753

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=91.90  E-value=2.6  Score=34.15  Aligned_cols=80  Identities=14%  Similarity=0.042  Sum_probs=55.9

Q ss_pred             CCCEEEEecCC-ChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGG-SGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        13 ~~k~vlItGas-~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      +|++||=..+. |+++.    ..+..|+ .|+.++.++..++...+.+...+   .++.++..|+.      ++++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            48888877665 44443    3455777 49999999988888877776543   36889998863      34444445


Q ss_pred             HcCCccEEEEcCCCC
Q 022335           88 HFGKLDILVNAAAGN  102 (299)
Q Consensus        88 ~~g~id~lv~~ag~~  102 (299)
                      ...++|+||....-+
T Consensus       214 ~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         214 HHLTYDIIIIDPPSF  228 (317)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEEcChhh
Confidence            556899999997643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.82  E-value=0.07  Score=42.64  Aligned_cols=34  Identities=21%  Similarity=0.373  Sum_probs=28.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      +|+|+|+||+ --|...|.+|+++|++|+++.+++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5889999875 458999999999999999998754

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.82  E-value=0.31  Score=37.82  Aligned_cols=75  Identities=20%  Similarity=0.105  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+||-+|+++|--.+   .|++.+.+|+.+..+++..+...+.+. ...++.++..|...-          ....+++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g----------~~~~~pf  135 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG----------YEEEKPY  135 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC----------CGGGCCE
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc----------chhhhhH
Confidence            47889999999885443   466667899999999887766655443 346899999987531          1123679


Q ss_pred             cEEEEcCCC
Q 022335           93 DILVNAAAG  101 (299)
Q Consensus        93 d~lv~~ag~  101 (299)
                      |.++.+++.
T Consensus       136 D~Iiv~~a~  144 (224)
T d1vbfa_         136 DRVVVWATA  144 (224)
T ss_dssp             EEEEESSBB
T ss_pred             HHHHhhcch
Confidence            999988774

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.58  E-value=0.15  Score=40.10  Aligned_cols=36  Identities=28%  Similarity=0.467  Sum_probs=30.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHH-cCCeEEEEeC
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGK-HGASVAIMGR   46 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~-~G~~Vv~~~r   46 (299)
                      ..|+|++++|.|- |.+|..+++.|++ .|++|+.++-
T Consensus        28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            3588999999987 6699999999986 5999887754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.18  E-value=0.42  Score=35.91  Aligned_cols=39  Identities=13%  Similarity=0.157  Sum_probs=34.2

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ...++++++.|.| .|.||+++++.|...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            3468899999998 57899999999999999999999864

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.13  E-value=0.79  Score=33.06  Aligned_cols=51  Identities=16%  Similarity=0.111  Sum_probs=34.9

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEE
Q 022335           15 KVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAV   66 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~   66 (299)
                      |++.|.|+||.||.....-+.++  ..+|+.++-+.. .+.+.+++.+...+..
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N-~~~L~~q~~~f~pk~v   54 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN-VTRMVEQCLEFSPRYA   54 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC-HHHHHHHHHHHCCSEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc-HHHHHHHHHHHhhccc
Confidence            57999999999999999887776  466776554332 2455555555554444

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.09  E-value=0.61  Score=33.63  Aligned_cols=82  Identities=11%  Similarity=0.112  Sum_probs=55.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG------IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~------~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +-++|. |-+|..+|++|++.|+.+ ...|+.++.+...++.....      .+..++-..+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            566666 889999999999988755 57788777766666542110      1223334456677888888887776655


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      +-.++|.+..
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5566666654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.96  E-value=0.2  Score=38.18  Aligned_cols=38  Identities=16%  Similarity=0.069  Sum_probs=32.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      .+.|. |.|-+|..+|..|+++|++|+++|.+++..+.+
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            36666 678999999999999999999999998765554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.67  E-value=0.2  Score=37.53  Aligned_cols=38  Identities=13%  Similarity=0.276  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ...++|.|+|+|| |.-|...|..|+++|++|.++.+++
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            4456899999987 5679999999999999999999864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.64  E-value=0.19  Score=38.36  Aligned_cols=39  Identities=21%  Similarity=0.161  Sum_probs=34.4

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ...+.||++.|.|. |.||+.+++.|...|++|+..++..
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            45788999999986 6799999999999999999999865

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.60  E-value=1.8  Score=35.09  Aligned_cols=81  Identities=17%  Similarity=0.085  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++||=..+..|.   ++..+++.|++|+.++.+...++...+.+...+   .++.++..|+.      ++++.....-
T Consensus       132 ~~~rVLdlf~~tG~---~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~  202 (309)
T d2igta1         132 RPLKVLNLFGYTGV---ASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG  202 (309)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred             CCCeEEEecCCCcH---HHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence            47788877776551   233456789999999999988888877665432   35888888863      3444444445


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      .++|+||.+..-+
T Consensus       203 ~~fD~IilDPP~f  215 (309)
T d2igta1         203 STYDIILTDPPKF  215 (309)
T ss_dssp             CCBSEEEECCCSE
T ss_pred             CCCCEEEECCCcc
Confidence            6899999987543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.58  E-value=0.21  Score=38.79  Aligned_cols=34  Identities=26%  Similarity=0.408  Sum_probs=29.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .|.|+|+|| |-.|..+|..|+++|++|.+++|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456888886 5679999999999999999999864

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=90.57  E-value=0.6  Score=35.69  Aligned_cols=77  Identities=16%  Similarity=0.191  Sum_probs=57.6

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      +.+||=.||+.|.-   +..|+++|++|+.++-+++.++...+.+...+ .++.++..|..+..-          ..+.+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~----------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF----------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS----------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccccc----------ccccc
Confidence            67899999998844   45678899999999999988887777666554 578999999876420          12479


Q ss_pred             cEEEEcCCCCC
Q 022335           93 DILVNAAAGNF  103 (299)
Q Consensus        93 d~lv~~ag~~~  103 (299)
                      |+++++..+.+
T Consensus        83 D~v~~~~~l~~   93 (231)
T d1vl5a_          83 HIVTCRIAAHH   93 (231)
T ss_dssp             EEEEEESCGGG
T ss_pred             ccccccccccc
Confidence            99988876543

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.43  E-value=1.8  Score=29.50  Aligned_cols=84  Identities=13%  Similarity=0.085  Sum_probs=51.5

Q ss_pred             CEEEEecCC---ChHHHHHHHHHHHcCCeEEEEeCChhHHH--HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           15 KVALITGGG---SGIGFEISTQFGKHGASVAIMGRRKQVLD--AAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        15 k~vlItGas---~giG~aia~~la~~G~~Vv~~~r~~~~~~--~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.+...  .+...+.+....+.... =...++.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHhc-
Confidence            689999998   56899999999999999988865432211  11111222222222111 124567777777777664 


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                       ++..++...|.
T Consensus        80 -g~k~v~~~~g~   90 (116)
T d1y81a1          80 -GFKKLWFQPGA   90 (116)
T ss_dssp             -TCCEEEECTTS
T ss_pred             -CCceEEeccch
Confidence             56667666553

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.39  E-value=0.23  Score=35.92  Aligned_cols=38  Identities=8%  Similarity=0.057  Sum_probs=30.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      ++-|+| .|.+|.++++.|+++|+.|+..+++++.....
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            356665 49999999999999999999988877654443

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.29  E-value=0.13  Score=38.42  Aligned_cols=34  Identities=12%  Similarity=0.268  Sum_probs=29.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~   48 (299)
                      +|+|+|+|| |-.|...|..|+++|++ |.++.++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            678889886 57899999999999995 88888754

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.76  E-value=0.08  Score=47.03  Aligned_cols=34  Identities=18%  Similarity=0.247  Sum_probs=28.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeC
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGR   46 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r   46 (299)
                      |+..+|+|.|+ ||+|..+++.|+..|.. +.++|.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            45678999997 78999999999999975 778765

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.60  E-value=0.79  Score=33.27  Aligned_cols=84  Identities=15%  Similarity=0.248  Sum_probs=54.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +|+++.|++.|||.|--++..+.+.|.++  ..-+++..+++.+.+....  .+..-+..+ .+.+...++++.+.+ .+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~-d~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQ-DP   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHH-ST
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHc-CC
Confidence            58999999999999999999999999554  4445555555555443321  222323333 356667777765544 36


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      .+|.++....
T Consensus        78 ~vd~v~v~~~   87 (163)
T d2csua3          78 NVDMLIAICV   87 (163)
T ss_dssp             TCSEEEEEEE
T ss_pred             CcCEEEEeec
Confidence            7887665443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.41  E-value=0.52  Score=34.41  Aligned_cols=39  Identities=23%  Similarity=0.337  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQV   50 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~   50 (299)
                      .+.||+++|.| -|-+|+.+|..|...|++|+++..++-.
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence            47899999987 5779999999999999999999999843

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.25  E-value=2.8  Score=30.81  Aligned_cols=80  Identities=16%  Similarity=0.169  Sum_probs=56.6

Q ss_pred             CCCCCEEEEecCCCh-HHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSG-IGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTF   86 (299)
Q Consensus        11 ~l~~k~vlItGas~g-iG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~   86 (299)
                      .++|+++|=..|++| +|.    +.+.+|+. |++++.+....+.+.+.+...+  .++.++..|+.      +++++..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~----ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAI----EAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred             hcCCCEEEEcccccccccc----eeeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence            456888876666544 555    45668886 9999999988888887776554  36888998863      3444444


Q ss_pred             HHcCCccEEEEcCC
Q 022335           87 EHFGKLDILVNAAA  100 (299)
Q Consensus        87 ~~~g~id~lv~~ag  100 (299)
                      ..-.++|+++....
T Consensus       109 ~~~~~fDlIflDPP  122 (182)
T d2fhpa1         109 EEKLQFDLVLLDPP  122 (182)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             ccCCCcceEEechh
Confidence            44457999988764

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.06  E-value=0.78  Score=37.31  Aligned_cols=76  Identities=28%  Similarity=0.323  Sum_probs=52.4

Q ss_pred             CCCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFE   87 (299)
Q Consensus        11 ~l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~   87 (299)
                      ..+|++||-.|++.|+   ++..++++|++ |+.++.++. .....+.+...  ..++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            3579999999999885   56667888865 888987754 34444444433  4569999998876421          


Q ss_pred             HcCCccEEEEcCC
Q 022335           88 HFGKLDILVNAAA  100 (299)
Q Consensus        88 ~~g~id~lv~~ag  100 (299)
                      ...++|+++...-
T Consensus        97 ~~~~~D~ivs~~~  109 (316)
T d1oria_          97 PVEKVDIIISEWM  109 (316)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             ccceeEEEeeeee
Confidence            1247899988643

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.01  E-value=0.12  Score=39.39  Aligned_cols=32  Identities=19%  Similarity=0.159  Sum_probs=28.0

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCeEEEEeC
Q 022335           15 KVALITGGGSGIGF-----EISTQFGKHGASVAIMGR   46 (299)
Q Consensus        15 k~vlItGas~giG~-----aia~~la~~G~~Vv~~~r   46 (299)
                      |++.|||.+.|.|+     .+|..|+++|.+|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            68999999999997     678889999999999873

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=88.88  E-value=3.1  Score=30.25  Aligned_cols=115  Identities=17%  Similarity=0.196  Sum_probs=66.5

Q ss_pred             EEEEecCCChHHH--HHHHHHHHc----CCeEEEEeCChhHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGF--EISTQFGKH----GASVAIMGRRKQVLDAAVSALRS----LGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        16 ~vlItGas~giG~--aia~~la~~----G~~Vv~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      ++.|.|| |.+|.  ++...|+..    +..++++|.++++++.....+.+    .+.+.++...  +|.+   +.    
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~~---ea----   73 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLD---DV----   73 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHH---HH----
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CChh---hc----
Confidence            5788887 44443  455555543    45899999999988765555543    2334443332  1222   22    


Q ss_pred             HHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHH--HHh-------------h---------hHHHHHHHHHHHHHHHhcC
Q 022335           86 FEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV--MDI-------------D---------SVGTFTMCHEALKYLKKGG  141 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~--~~~-------------n---------~~~~~~l~~~~~~~m~~~~  141 (299)
                         +...|++|+.++...        .+.+...  +..             +         .....-.++.+.+.+++..
T Consensus        74 ---L~dad~Vv~~~~~g~--------~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~  142 (171)
T d1obba1          74 ---IIDADFVINTAMVGG--------HTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS  142 (171)
T ss_dssp             ---HTTCSEEEECCCTTH--------HHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC
T ss_pred             ---ccCCCeEeeeccccc--------ccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC
Confidence               237899999987542        1111111  110             1         2235667788888888876


Q ss_pred             CCCCCCCCceEEEecc
Q 022335          142 PGRSSAGGGSILNISA  157 (299)
Q Consensus       142 ~~~~~~~~g~iv~vsS  157 (299)
                      +      .+.++++|.
T Consensus       143 p------~a~~i~~TN  152 (171)
T d1obba1         143 P------KAWYLQAAN  152 (171)
T ss_dssp             T------TCEEEECSS
T ss_pred             c------CeEEEEECC
Confidence            4      567777665

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.88  E-value=0.14  Score=34.85  Aligned_cols=38  Identities=11%  Similarity=0.211  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ..++||+|+|.|++ .-|..+|..|++.+.+++...|+.
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            35789999999987 668899999999988888777765

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.80  E-value=0.81  Score=31.19  Aligned_cols=34  Identities=24%  Similarity=0.301  Sum_probs=26.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc---CCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKH---GASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~---G~~Vv~~~r~~   48 (299)
                      .+.++|.|| |.+|..+|..|.+.   |.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            467888888 89999999776654   45698888754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.78  E-value=0.19  Score=40.62  Aligned_cols=35  Identities=20%  Similarity=0.378  Sum_probs=30.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      +.|.|+|+||+- -|...|..|+++|++|+++.+++
T Consensus        29 ~pkkV~IIGaG~-aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAGM-AGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCBH-HHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCCH-HHHHHHHHHHHCCCCEEEEeCCC
Confidence            367899999864 49999999999999999998764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.77  E-value=0.6  Score=32.43  Aligned_cols=34  Identities=26%  Similarity=0.439  Sum_probs=29.1

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .+.++|.|| |-||..+|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            467888875 7899999999999999999998753

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.61  E-value=0.89  Score=35.05  Aligned_cols=80  Identities=19%  Similarity=0.212  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHH-cC----CeEEEEeCChhHHHHHHHHHHhc------CCcEEEEEcCCCCHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGK-HG----ASVAIMGRRKQVLDAAVSALRSL------GIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~-~G----~~Vv~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      .|.+||.+|+++|--.++..+++. .|    .+|+.+.++++-.+...+.+...      -.++.++..|..+.      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            478999999999988888887775 34    47999999987766655444221      24799999997631      


Q ss_pred             HHHHHHHcCCccEEEEcCCCC
Q 022335           82 VESTFEHFGKLDILVNAAAGN  102 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~~  102 (299)
                          ....+++|.++.+++..
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                12346899999988753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.47  E-value=1.1  Score=31.21  Aligned_cols=35  Identities=20%  Similarity=0.342  Sum_probs=30.3

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .+++++|.|| |-+|..+|..|++.|.+|.++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            3678888864 7899999999999999999998864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=88.45  E-value=1.8  Score=30.34  Aligned_cols=86  Identities=14%  Similarity=0.068  Sum_probs=49.9

Q ss_pred             CCCEEEEecCC---ChHHHHHHHHHHHcCCeEEEEeCChhH----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           13 KGKVALITGGG---SGIGFEISTQFGKHGASVAIMGRRKQV----LDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        13 ~~k~vlItGas---~giG~aia~~la~~G~~Vv~~~r~~~~----~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +-|++.|+|+|   +..|..+.+.|.+.|++++.+--+...    ...+...+.+....+..+.+ +..++.+.++++++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence            57899999998   569999999999999998887643310    00011111111111111111 23466666666666


Q ss_pred             HHHcCCccEEEEcCCC
Q 022335           86 FEHFGKLDILVNAAAG  101 (299)
Q Consensus        86 ~~~~g~id~lv~~ag~  101 (299)
                      .+.  ++..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            554  45556665553

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.44  E-value=0.29  Score=37.37  Aligned_cols=31  Identities=13%  Similarity=0.198  Sum_probs=26.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      |+|+| +|--|..+|..|+++|.+|.++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67887 56669999999999999999999864

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.26  E-value=0.69  Score=33.32  Aligned_cols=55  Identities=11%  Similarity=0.145  Sum_probs=38.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHhcCCcEEEEE
Q 022335           14 GKVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRSLGIKAVGFE   69 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~   69 (299)
                      -|++.|.|+||.||.....-+.++  ..+|+.++.+. ..+.+.+++.+...+..++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i~   58 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVIA   58 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccceec
Confidence            478999999999999998887665  56777665443 23555666666666555443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.00  E-value=0.85  Score=30.93  Aligned_cols=34  Identities=29%  Similarity=0.570  Sum_probs=28.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .+.++|.| +|-+|..+|..|++.|.+|.++.+.+
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            36677775 57899999999999999999998754

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.94  E-value=0.22  Score=38.36  Aligned_cols=35  Identities=26%  Similarity=0.480  Sum_probs=30.6

Q ss_pred             CCEEEEecCCChHHH-----HHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGF-----EISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~-----aia~~la~~G~~Vv~~~r~~   48 (299)
                      ||++.|+|+-||.|+     .+|..|+++|.+|.+++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999999987     56778889999999999763

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=87.81  E-value=4.1  Score=30.30  Aligned_cols=143  Identities=13%  Similarity=0.090  Sum_probs=76.5

Q ss_pred             CCCCCEEEEecCC--ChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           11 ILKGKVALITGGG--SGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        11 ~l~~k~vlItGas--~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ...|.+++|....  .....+++..|.++|..++.+..+..                       .+.+.   +. .....
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~---l~-~~~~~   74 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDE---LA-ERLRS   74 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHH---HH-HHHTT
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHH---HH-HHhhc
Confidence            3457766666443  34677788888888888776654321                       12222   22 23344


Q ss_pred             cCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEeccccccccCCCch
Q 022335           89 FGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGRSSAGGGSILNISATLHYTASWYQI  168 (299)
Q Consensus        89 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~m~~~~~~~~~~~~g~iv~vsS~~~~~~~~~~~  168 (299)
                      .+.++.||+..+......- ... .     ....+...+.+++++.   ....       ..++.+++........ +-.
T Consensus        75 ~~~~~~vv~l~~~~~~~~~-~~~-~-----~~~~~~~~l~l~qal~---~~~~-------~~~l~~vT~~a~~~~~-~d~  136 (209)
T d2fr1a2          75 VGEVAGVLSLLAVDEAEPE-EAP-L-----ALASLADTLSLVQAMV---SAEL-------GCPLWTVTESAVATGP-FER  136 (209)
T ss_dssp             SCCCSEEEECTTTTCCCCS-SCG-G-----GCHHHHHHHHHHHHHH---HTTC-------CCCEEEEEESCSCSST-TSC
T ss_pred             cCCCCeEEEeCCCCCCCCc-chh-H-----HHHHHHHHHHHHHHHH---hCCC-------CCcEEEEEcCCcccCC-Ccc
Confidence            5788999998765322111 111 1     1112334455555543   2221       3556666554332221 111


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 022335          169 HVAAAKAAVDAITRNLALEWGADYDIRVNGI  199 (299)
Q Consensus       169 ~Y~~sKaal~~l~~~la~e~~~~~gi~v~~i  199 (299)
                      .-+...+++-+|+++++.|+. ...+++..+
T Consensus       137 ~~~p~~A~l~Gl~r~~~~E~P-~l~~~~vDl  166 (209)
T d2fr1a2         137 VRNAAHGALWGVGRVIALENP-AVWGGLVDV  166 (209)
T ss_dssp             CSCGGGHHHHHHHHHHHHHCG-GGEEEEEEE
T ss_pred             cCCHhHHhHHHHHHHHHHhCC-CceEEEEEC
Confidence            223468889999999999985 333444444

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=87.61  E-value=0.6  Score=35.15  Aligned_cols=41  Identities=15%  Similarity=0.179  Sum_probs=35.1

Q ss_pred             CcCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335            8 KADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus         8 ~~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      ....++|+++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        41 ~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          41 VGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            345788999999975 68999999999999999999987654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.53  E-value=1.2  Score=35.44  Aligned_cols=77  Identities=17%  Similarity=0.091  Sum_probs=50.8

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC-----cEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-----KAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-----~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      +++||=.|++.|.   ++..|+++|++|+.++.++.-++...+.....+.     ...+..+|....+.  .     ...
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~  126 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK--D-----VPA  126 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH--H-----SCC
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc--c-----cCC
Confidence            6789999998885   4666888999999999999988877666654432     23344455433221  0     001


Q ss_pred             cCCccEEEEcCC
Q 022335           89 FGKLDILVNAAA  100 (299)
Q Consensus        89 ~g~id~lv~~ag  100 (299)
                      .+.+|.+++...
T Consensus       127 ~~~fd~v~~~~~  138 (292)
T d1xvaa_         127 GDGFDAVICLGN  138 (292)
T ss_dssp             TTCEEEEEECSS
T ss_pred             CCCceEEEEecC
Confidence            146898887543

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=87.49  E-value=2.1  Score=34.41  Aligned_cols=84  Identities=19%  Similarity=0.227  Sum_probs=51.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHhcCCcEEEEEcCCCCHH------------------
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMG-RRKQVLDAAVSALRSLGIKAVGFEGDVRRQE------------------   76 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~------------------   76 (299)
                      ..+|+..+|.-|.++|..-+..|.+++++- .+.+  +...+.++..+.++..+..+.....                  
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~k~~~l~~~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~~  147 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP--EAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPY  147 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC--HHHHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSS
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeeccccccc--HHHHHHHHHcCCcEEeccCCchHHHHHHHHHHHhcCCEecCCc
Confidence            358888999999999999999998855543 3322  2334445666666665543333222                  


Q ss_pred             -------HHHHHHHHHHHHcCCccEEEEcCCC
Q 022335           77 -------HAKKVVESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        77 -------~v~~~~~~~~~~~g~id~lv~~ag~  101 (299)
                             ....+..++.++++.+|++|...|.
T Consensus       148 ~~~~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~  179 (318)
T d1v71a1         148 DHPHVLAGQGTAAKELFEEVGPLDALFVCLGG  179 (318)
T ss_dssp             SSHHHHHHHTHHHHHHHHHHCCCSEEEEECSS
T ss_pred             cccccccccchHHHHHHHhcCCCCEEEEcCCc
Confidence                   2233344455556667777766653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.42  E-value=0.75  Score=31.61  Aligned_cols=34  Identities=29%  Similarity=0.505  Sum_probs=28.9

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ++.++|.|| |.+|..+|..|+++|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            466777665 7899999999999999999998864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.42  E-value=0.91  Score=30.87  Aligned_cols=33  Identities=18%  Similarity=0.259  Sum_probs=28.2

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      |.++|.|| |-+|..+|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777664 7899999999999999999999864

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=87.19  E-value=0.34  Score=37.82  Aligned_cols=34  Identities=18%  Similarity=0.289  Sum_probs=28.7

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .++|+|+||+ --|..+|..|+++|.+|+++.+++
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5678898874 568889999999999999999865

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.07  E-value=0.23  Score=39.54  Aligned_cols=37  Identities=14%  Similarity=0.239  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCChHHHHH-----HHHHHHcCCeEEEEeCChh
Q 022335           13 KGKVALITGGGSGIGFEI-----STQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        13 ~~k~vlItGas~giG~ai-----a~~la~~G~~Vv~~~r~~~   49 (299)
                      .++.++|+.|-||.|+-+     |..|+++|.+|++++.++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            377888888899999954     7889999999999999864

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.99  E-value=1.3  Score=32.89  Aligned_cols=77  Identities=10%  Similarity=0.047  Sum_probs=51.7

Q ss_pred             EecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 022335           19 ITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNA   98 (299)
Q Consensus        19 ItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~   98 (299)
                      +..|+-|-|-+ .+.+++++.+|+++|++++..+.... .  ...++.+++.++++.++..   ...  ..+++|.++..
T Consensus        22 ~vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~--~~~~~~~~~~~f~~~~~~l---~~~--~~~~vdgIl~D   92 (182)
T d1wg8a2          22 YVDATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L--HLPGLTVVQGNFRHLKRHL---AAL--GVERVDGILAD   92 (182)
T ss_dssp             EEETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T--CCTTEEEEESCGGGHHHHH---HHT--TCSCEEEEEEE
T ss_pred             EEEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c--cccceeEeehHHHHHHHHH---HHc--CCCccCEEEEE
Confidence            44555555555 35566677899999999987665433 2  3457999999888754432   211  13689999999


Q ss_pred             CCCCCC
Q 022335           99 AAGNFL  104 (299)
Q Consensus        99 ag~~~~  104 (299)
                      -|+...
T Consensus        93 LGvSs~   98 (182)
T d1wg8a2          93 LGVSSF   98 (182)
T ss_dssp             CSCCHH
T ss_pred             ccCCHH
Confidence            997643

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=86.72  E-value=2  Score=34.08  Aligned_cols=77  Identities=14%  Similarity=0.118  Sum_probs=55.3

Q ss_pred             CCEEEEecCCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           14 GKVALITGGGSG-IGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGI-KAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        14 ~k~vlItGas~g-iG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +..+|=.|+++| ||.+++..+  ..++|++++.++..++-..+.+...+. ++.++..|+.+.-.           ..+
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~~-----------~~~  175 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA-----------GQQ  175 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT-----------TCC
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeecccccccC-----------CCc
Confidence            345676776544 555555543  357899999999988888887776664 69999999875411           148


Q ss_pred             ccEEEEcCCCCC
Q 022335           92 LDILVNAAAGNF  103 (299)
Q Consensus        92 id~lv~~ag~~~  103 (299)
                      +|++|.|..+..
T Consensus       176 fDlIvsNPPYi~  187 (274)
T d2b3ta1         176 FAMIVSNPPYID  187 (274)
T ss_dssp             EEEEEECCCCBC
T ss_pred             eeEEEecchhhh
Confidence            999999987543

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=86.41  E-value=1.4  Score=33.70  Aligned_cols=76  Identities=17%  Similarity=0.146  Sum_probs=57.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      |.+||=.|++.|.   ++..|++++.+|+.++-++..++...+.+...+ .++.++..|+.+..- .         .+.+
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~-~---------~~~f   83 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF-P---------DDSF   83 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCS-C---------TTCE
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccccccccccccccccccc-c---------cccc
Confidence            7889999999884   456677889999999999988887777666554 469999999765320 0         1479


Q ss_pred             cEEEEcCCCC
Q 022335           93 DILVNAAAGN  102 (299)
Q Consensus        93 d~lv~~ag~~  102 (299)
                      |.++++-.+.
T Consensus        84 D~v~~~~~l~   93 (234)
T d1xxla_          84 DIITCRYAAH   93 (234)
T ss_dssp             EEEEEESCGG
T ss_pred             ceeeeeceee
Confidence            9888876544

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=86.25  E-value=4.5  Score=29.55  Aligned_cols=83  Identities=13%  Similarity=0.152  Sum_probs=58.3

Q ss_pred             CCEEEEecCCChHHHHHHHH---HHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Q 022335           14 GKVALITGGGSGIGFEISTQ---FGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFG   90 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~---la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g   90 (299)
                      +..+=|-.....+ ..+..+   ..++|-++++++.+...++.+.+.+.+.+-++..+..++.+.+ -++.++...+  |
T Consensus         5 dP~iev~p~~~qv-~dll~~i~~~~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~--G   80 (174)
T d1c4oa2           5 DPLVRVKPTENQI-LDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL--G   80 (174)
T ss_dssp             CCEEEEECSTTHH-HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT--T
T ss_pred             CCCEEEEeCCCCH-HHHHHHHHHHHhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC--C
Confidence            3345555444433 123333   3457889999999999999999999999999999999976544 3444454433  7


Q ss_pred             CccEEEEcCC
Q 022335           91 KLDILVNAAA  100 (299)
Q Consensus        91 ~id~lv~~ag  100 (299)
                      ++++||+..-
T Consensus        81 ~~~vLVaT~v   90 (174)
T d1c4oa2          81 HYDCLVGINL   90 (174)
T ss_dssp             SCSEEEESCC
T ss_pred             CeEEEEeeee
Confidence            9999999764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=86.22  E-value=1.7  Score=34.34  Aligned_cols=76  Identities=13%  Similarity=0.019  Sum_probs=55.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|.+||=.||+.|.   ++..|+++ |++|+.++-++..++...+.....+  .++.++.+|+.+..-          ..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~----------~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------ED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------CT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc----------cc
Confidence            47899999998773   45556654 8999999999988877777666553  579999999875310          12


Q ss_pred             CCccEEEEcCCC
Q 022335           90 GKLDILVNAAAG  101 (299)
Q Consensus        90 g~id~lv~~ag~  101 (299)
                      +.+|+|+.+..+
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            479998877554

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.06  E-value=1.3  Score=30.32  Aligned_cols=32  Identities=25%  Similarity=0.349  Sum_probs=27.3

Q ss_pred             CEEEEecCCChHHHHHHHHHHHcCCeEEEEeCC
Q 022335           15 KVALITGGGSGIGFEISTQFGKHGASVAIMGRR   47 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~G~~Vv~~~r~   47 (299)
                      +.++|+|| |-||..+|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45677765 789999999999999999999875

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.87  E-value=2.1  Score=31.74  Aligned_cols=76  Identities=14%  Similarity=0.109  Sum_probs=56.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG---IKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ..+++||=.|++.|   .++..+++.+.+|++++.++...+...+.+...+   .++.++..|+.+.-  .         
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~---------  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--K---------  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--T---------
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--c---------
Confidence            45889999999888   4455677888999999999988887777665443   36899999986421  1         


Q ss_pred             cCCccEEEEcCCC
Q 022335           89 FGKLDILVNAAAG  101 (299)
Q Consensus        89 ~g~id~lv~~ag~  101 (299)
                      -+.+|.++.|..+
T Consensus       117 ~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 DRKYNKIITNPPI  129 (194)
T ss_dssp             TSCEEEEEECCCS
T ss_pred             cCCceEEEEcccE
Confidence            1379999998653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.85  E-value=4.8  Score=29.10  Aligned_cols=116  Identities=9%  Similarity=0.068  Sum_probs=62.3

Q ss_pred             EEEEecC-CChHHHHHHHHHHHcC----CeEEEEeCChhH--HHHHHHH----HHhcCCcEEEEEcCCCCHHHHHHHHHH
Q 022335           16 VALITGG-GSGIGFEISTQFGKHG----ASVAIMGRRKQV--LDAAVSA----LRSLGIKAVGFEGDVRRQEHAKKVVES   84 (299)
Q Consensus        16 ~vlItGa-s~giG~aia~~la~~G----~~Vv~~~r~~~~--~~~~~~~----~~~~~~~v~~~~~Dl~~~~~v~~~~~~   84 (299)
                      .+.|+|| +.+.+.+++.-+....    ..+++++.+++.  ++..-..    ....+.++.+..  -+|..+   .   
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~--~td~~~---a---   74 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL--TLDRRR---A---   74 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE--ESCHHH---H---
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeee--cCCchh---h---
Confidence            4777786 4566676666555432    379999988754  3333221    122233333322  123221   1   


Q ss_pred             HHHHcCCccEEEEcCCCCCCCCCCCCCHHHHHHH--HHhh----------------hHHHHHHHHHHHHHHHhcCCCCCC
Q 022335           85 TFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTV--MDID----------------SVGTFTMCHEALKYLKKGGPGRSS  146 (299)
Q Consensus        85 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~--~~~n----------------~~~~~~l~~~~~~~m~~~~~~~~~  146 (299)
                          +..-|++|+.+|....        +.+.+.  +..|                ......+++.+.+.+.+..+    
T Consensus        75 ----l~gaDvVv~ta~~~~~--------~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~p----  138 (169)
T d1s6ya1          75 ----LDGADFVTTQFRVGGL--------EARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP----  138 (169)
T ss_dssp             ----HTTCSEEEECCCTTHH--------HHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT----
T ss_pred             ----cCCCCEEEEccccCCC--------CCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCC----
Confidence                2367999999986521        112111  1111                12345667788888888764    


Q ss_pred             CCCceEEEecc
Q 022335          147 AGGGSILNISA  157 (299)
Q Consensus       147 ~~~g~iv~vsS  157 (299)
                        .+-++++|.
T Consensus       139 --da~~i~vtN  147 (169)
T d1s6ya1         139 --DAWLINFTN  147 (169)
T ss_dssp             --TCEEEECSS
T ss_pred             --CeEEEEeCC
Confidence              566666654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=85.58  E-value=0.75  Score=34.39  Aligned_cols=39  Identities=21%  Similarity=0.122  Sum_probs=34.0

Q ss_pred             cCCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335            9 ADILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus         9 ~~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ...+.++++.|. |.|.||+.+++.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEe-ecccchhhhhhhcccccceEeeccccc
Confidence            346889999999 468899999999999999999999864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.58  E-value=0.42  Score=36.96  Aligned_cols=36  Identities=22%  Similarity=0.300  Sum_probs=30.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      -.+|.++|+||+ -.|...|..|+++|++|.++.++.
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            358999999985 459999999999999999998754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.51  E-value=1.5  Score=35.71  Aligned_cols=75  Identities=27%  Similarity=0.356  Sum_probs=51.8

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSL--GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++|++||-.|++.|+   ++..++++|++ |++++.++ .++...+..+..  ..++.++..|+.+.+-          .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence            579999999999884   45667788874 88888775 444444444444  3579999998875420          1


Q ss_pred             cCCccEEEEcCC
Q 022335           89 FGKLDILVNAAA  100 (299)
Q Consensus        89 ~g~id~lv~~ag  100 (299)
                      ..++|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            147899988653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=85.18  E-value=3.4  Score=26.92  Aligned_cols=71  Identities=20%  Similarity=0.220  Sum_probs=45.8

Q ss_pred             CCCEEEEecCCChHH-HHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Q 022335           13 KGKVALITGGGSGIG-FEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGK   91 (299)
Q Consensus        13 ~~k~vlItGas~giG-~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~   91 (299)
                      +.|.+-+.|-+| +| .++|+.|.++|+.|...|+.....   .+.+.+.+.+  +...+-.  +           ...+
T Consensus         7 ~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~~---~~~L~~~Gi~--v~~g~~~--~-----------~i~~   67 (96)
T d1p3da1           7 RVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGVV---TQRLAQAGAK--IYIGHAE--E-----------HIEG   67 (96)
T ss_dssp             TCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSHH---HHHHHHTTCE--EEESCCG--G-----------GGTT
T ss_pred             hCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCChh---hhHHHHCCCe--EEECCcc--c-----------cCCC
Confidence            467788887643 44 577999999999999999875422   2334444533  3333222  1           1236


Q ss_pred             ccEEEEcCCCC
Q 022335           92 LDILVNAAAGN  102 (299)
Q Consensus        92 id~lv~~ag~~  102 (299)
                      .|.+|...++.
T Consensus        68 ~d~vV~S~AI~   78 (96)
T d1p3da1          68 ASVVVVSSAIK   78 (96)
T ss_dssp             CSEEEECTTSC
T ss_pred             CCEEEECCCcC
Confidence            79999998875

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.11  E-value=5.1  Score=28.72  Aligned_cols=74  Identities=12%  Similarity=-0.024  Sum_probs=41.0

Q ss_pred             EEEEecCCChHHHHHHH-HHHHc-----CCeEEEEeCChhHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           16 VALITGGGSGIGFEIST-QFGKH-----GASVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        16 ~vlItGas~giG~aia~-~la~~-----G~~Vv~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      ++.|.||++ +|...+- .+++.     ...++++|.++++++...+..... .....+...  ++.+   +.+      
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~~~~---~~l------   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--DTFE---GAV------   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--SSHH---HHH------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--cCcc---ccc------
Confidence            478889865 4544442 23322     357999999998877544333321 222222211  2222   112      


Q ss_pred             cCCccEEEEcCCCC
Q 022335           89 FGKLDILVNAAAGN  102 (299)
Q Consensus        89 ~g~id~lv~~ag~~  102 (299)
                       ..-|++|..+|..
T Consensus        70 -~~aDvVVita~~~   82 (162)
T d1up7a1          70 -VDAKYVIFQFRPG   82 (162)
T ss_dssp             -TTCSEEEECCCTT
T ss_pred             -CCCCEEEEecccC
Confidence             3679999999854

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.95  E-value=0.41  Score=38.09  Aligned_cols=33  Identities=24%  Similarity=0.383  Sum_probs=29.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      .|+|+||+ -.|..+|..|+++|.+|+++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            37888887 8899999999999999999998764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.92  E-value=0.32  Score=37.34  Aligned_cols=34  Identities=18%  Similarity=0.383  Sum_probs=29.2

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCeEEEEeCCh
Q 022335           15 KVALITGGGSGIGF-----EISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        15 k~vlItGas~giG~-----aia~~la~~G~~Vv~~~r~~   48 (299)
                      |++.|+++-||.|+     .+|..|+++|.+|.+++.+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            68999999999887     56778889999999998764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.91  E-value=0.51  Score=34.21  Aligned_cols=35  Identities=17%  Similarity=0.334  Sum_probs=28.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC--eEEEEeCCh
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA--SVAIMGRRK   48 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~--~Vv~~~r~~   48 (299)
                      .||+++|+||+ -.|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999985 569999999999885  688887654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.29  E-value=0.5  Score=38.53  Aligned_cols=35  Identities=37%  Similarity=0.520  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      +.|.++|+||+ --|..+|..|+++|++|.++..+.
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            35789999875 468899999999999999998765

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.20  E-value=0.56  Score=38.01  Aligned_cols=32  Identities=25%  Similarity=0.530  Sum_probs=23.7

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCeEEEEeCC
Q 022335           15 KVALITGGGSGIGF-----EISTQFGKHGASVAIMGRR   47 (299)
Q Consensus        15 k~vlItGas~giG~-----aia~~la~~G~~Vv~~~r~   47 (299)
                      |++||++|+.| |.     +++++|.++|++|.+++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45677665544 54     6899999999999887654

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=84.06  E-value=2.8  Score=30.81  Aligned_cols=77  Identities=13%  Similarity=0.060  Sum_probs=53.3

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGAS-VAIMGRRKQVLDAAVSALRSLG-IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      +.+.++|=.+|++|   ++..+.+.+|+. |++++.+....+.+.+.+...+ .++.++..|+.         +.+....
T Consensus        42 ~~~~~vLDlfaGsG---~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~~~  109 (183)
T d2fpoa1          42 IVDAQCLDCFAGSG---ALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQKG  109 (183)
T ss_dssp             HTTCEEEETTCTTC---HHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSSCC
T ss_pred             cchhhhhhhhcccc---ceeeeEEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------ccccccc
Confidence            56777776666555   344556678885 9999999998888888776654 46888888732         2222233


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      ..+|+++....
T Consensus       110 ~~fDlIf~DPP  120 (183)
T d2fpoa1         110 TPHNIVFVDPP  120 (183)
T ss_dssp             CCEEEEEECCS
T ss_pred             cccCEEEEcCc
Confidence            57899998865

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.98  E-value=0.42  Score=37.61  Aligned_cols=32  Identities=13%  Similarity=0.360  Sum_probs=27.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .|+|+|| |--|...|..|+++|++|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4889988 6678999999999999999998754

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.91  E-value=1.6  Score=34.82  Aligned_cols=72  Identities=15%  Similarity=0.069  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCChHHHHHHHHHH-HcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFG-KHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la-~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|.+||=+|++.|   .++..++ +.|++|+.++.+++..+...+.+.+.+  .++.+..+|..+.+             
T Consensus        62 ~G~~VLDiGCG~G---~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------------  125 (285)
T d1kpga_          62 PGMTLLDVGCGWG---ATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-------------  125 (285)
T ss_dssp             TTCEEEEETCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-------------
T ss_pred             CCCEEEEecCcch---HHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhccc-------------
Confidence            4889999999877   3333333 359999999999998888777776654  57888888864321             


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      +.+|.++..-.
T Consensus       126 ~~fD~i~si~~  136 (285)
T d1kpga_         126 EPVDRIVSIGA  136 (285)
T ss_dssp             CCCSEEEEESC
T ss_pred             ccccceeeehh
Confidence            47888777544

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.89  E-value=1.6  Score=34.71  Aligned_cols=72  Identities=17%  Similarity=0.063  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|.+||=+|++.|   .++..++++ |++|+.++.+++..+...+.+++.+  ..+.+...|..+.             -
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~~-------------~  115 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-------------A  115 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-------------C
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhhh-------------c
Confidence            3889999999977   345556654 9999999999999888888787765  3566666664432             2


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      +++|.++..--
T Consensus       116 ~~fD~i~si~~  126 (280)
T d2fk8a1         116 EPVDRIVSIEA  126 (280)
T ss_dssp             CCCSEEEEESC
T ss_pred             cchhhhhHhhH
Confidence            47888877644

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.75  E-value=0.56  Score=35.79  Aligned_cols=38  Identities=26%  Similarity=0.421  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           10 DILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        10 ~~l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ..++||+|+|.|++.. |..+|.++++.+++++.+.|..
T Consensus        28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccccc
Confidence            4688999999988764 8999999999999999888764

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.41  E-value=0.9  Score=31.74  Aligned_cols=85  Identities=13%  Similarity=0.151  Sum_probs=53.5

Q ss_pred             CCCCCEEEEecCC---ChHHHHHHHHHHHcC-CeEEEEeCChhHHH--HHHHHHHhcCC--cEEEEEcCCCCHHHHHHHH
Q 022335           11 ILKGKVALITGGG---SGIGFEISTQFGKHG-ASVAIMGRRKQVLD--AAVSALRSLGI--KAVGFEGDVRRQEHAKKVV   82 (299)
Q Consensus        11 ~l~~k~vlItGas---~giG~aia~~la~~G-~~Vv~~~r~~~~~~--~~~~~~~~~~~--~v~~~~~Dl~~~~~v~~~~   82 (299)
                      .++-|++.|+|+|   +..|..+.+.|.+.| .+|+.+..+.++..  .+...+.+...  ++.++   ....+.+.+++
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi---~vp~~~~~~~~   81 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII---VVPKRFVKDTL   81 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE---CSCHHHHHHHH
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE---ecChHHhHHHH
Confidence            5678899999999   889999999987766 57888876543211  11122222222  22222   23578888888


Q ss_pred             HHHHHHcCCccEEEEcCC
Q 022335           83 ESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        83 ~~~~~~~g~id~lv~~ag  100 (299)
                      +++.+.  ++..++..++
T Consensus        82 ~~~~~~--g~~~~vi~s~   97 (129)
T d2csua1          82 IQCGEK--GVKGVVIITA   97 (129)
T ss_dssp             HHHHHH--TCCEEEECCC
T ss_pred             HHHHHc--CCCEEEEecc
Confidence            888776  5555554444

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.26  E-value=2.5  Score=28.85  Aligned_cols=34  Identities=24%  Similarity=0.475  Sum_probs=29.3

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      .+.++|.|| |-||..+|..|++.|.+|.++.|.+
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            467777775 7899999999999999999998864

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.93  E-value=6.9  Score=30.73  Aligned_cols=76  Identities=20%  Similarity=0.253  Sum_probs=48.6

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHH-----------hcCCcEEEEEcCCCCHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALR-----------SLGIKAVGFEGDVRRQEHAK   79 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~-----------~~~~~v~~~~~Dl~~~~~v~   79 (299)
                      .+.+.|||.|+++|.   +++++++++ .+|.++.-++.-.+...+.+.           ....+++++..|..      
T Consensus        71 ~~p~~vLiiG~G~G~---~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~------  141 (276)
T d1mjfa_          71 PKPKRVLVIGGGDGG---TVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF------  141 (276)
T ss_dssp             SCCCEEEEEECTTSH---HHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH------
T ss_pred             CCCceEEEecCCchH---HHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHH------
Confidence            356889999998773   334444444 358889988876655543321           12457899988853      


Q ss_pred             HHHHHHHHHcCCccEEEEcCC
Q 022335           80 KVVESTFEHFGKLDILVNAAA  100 (299)
Q Consensus        80 ~~~~~~~~~~g~id~lv~~ag  100 (299)
                      ++++    ...+.|++|.-..
T Consensus       142 ~~l~----~~~~yDvIi~D~~  158 (276)
T d1mjfa_         142 EFIK----NNRGFDVIIADST  158 (276)
T ss_dssp             HHHH----HCCCEEEEEEECC
T ss_pred             HHHh----ccCCCCEEEEeCC
Confidence            2222    2368999998653

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=82.88  E-value=2.5  Score=34.23  Aligned_cols=78  Identities=15%  Similarity=0.177  Sum_probs=43.7

Q ss_pred             EEEEecCCC-hHH--HHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCC----------------HH
Q 022335           16 VALITGGGS-GIG--FEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRR----------------QE   76 (299)
Q Consensus        16 ~vlItGas~-giG--~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~----------------~~   76 (299)
                      +++.++||+ .|=  .++|++|+++|++|++++...-     .+.+.+.+-.+..+..+...                ..
T Consensus         3 il~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~-----~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (391)
T d1pn3a_           3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDY-----VERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTE   77 (391)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGG-----HHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHH
T ss_pred             EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhh-----HhHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHHH
Confidence            344455553 332  3789999999999998874321     22233344344333322211                22


Q ss_pred             HHHHHHHHHHHHcCCccEEEEc
Q 022335           77 HAKKVVESTFEHFGKLDILVNA   98 (299)
Q Consensus        77 ~v~~~~~~~~~~~g~id~lv~~   98 (299)
                      -++..++.+.+....+|.+|..
T Consensus        78 ~~~~~~~~l~~~~~~~D~vi~~   99 (391)
T d1pn3a_          78 VVAEWFDKVPAAIEGCDAVVTT   99 (391)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHHHHhcCCCeEEEc
Confidence            3455555555555678988875

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.79  E-value=0.34  Score=38.37  Aligned_cols=34  Identities=21%  Similarity=0.456  Sum_probs=28.0

Q ss_pred             CEEEEecCCChHHH-----HHHHHHHHcCCeEEEEeCChh
Q 022335           15 KVALITGGGSGIGF-----EISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        15 k~vlItGas~giG~-----aia~~la~~G~~Vv~~~r~~~   49 (299)
                      |++.|+| -||.|+     .+|..|++.|.+|.++|.++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5788898 888887     456689999999999998863

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=82.68  E-value=4.6  Score=32.51  Aligned_cols=76  Identities=28%  Similarity=0.361  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRSL-----GIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +.|.|||.|++.|   .++++++++.  .+|.++.-+++-.+.+.+.+...     ..++.++..|..      +++   
T Consensus       106 ~pk~VLIiGgG~G---~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~------~~l---  173 (312)
T d2b2ca1         106 DPKRVLIIGGGDG---GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGF------EFL---  173 (312)
T ss_dssp             SCCEEEEESCTTS---HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHH------HHH---
T ss_pred             CCCeEEEeCCCch---HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHH------HHH---
Confidence            4678999999877   3566666653  57999999998777776655321     357888888832      233   


Q ss_pred             HHHcCCccEEEEcCC
Q 022335           86 FEHFGKLDILVNAAA  100 (299)
Q Consensus        86 ~~~~g~id~lv~~ag  100 (299)
                      .+.-.+.|++|.-.-
T Consensus       174 ~~~~~~yDvII~D~~  188 (312)
T d2b2ca1         174 KNHKNEFDVIITDSS  188 (312)
T ss_dssp             HHCTTCEEEEEECCC
T ss_pred             HhCCCCCCEEEEcCC
Confidence            233357999998753

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.60  E-value=1.1  Score=33.96  Aligned_cols=77  Identities=12%  Similarity=0.142  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKL   92 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~i   92 (299)
                      .|.+||=.|++.|.-......+...| +|+.++.++..++.+.+..+.. .++.++..|..++..-...       +..+
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~-------~~~v  126 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-------VEKV  126 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------CCCE
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------cceE
Confidence            37899999998885333222333334 8999999999888877766543 5789999998876553222       2356


Q ss_pred             cEEEEc
Q 022335           93 DILVNA   98 (299)
Q Consensus        93 d~lv~~   98 (299)
                      |++++.
T Consensus       127 d~v~~~  132 (209)
T d1nt2a_         127 DLIYQD  132 (209)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            666654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=82.50  E-value=0.2  Score=36.84  Aligned_cols=84  Identities=14%  Similarity=0.131  Sum_probs=53.5

Q ss_pred             CEEEEecCCChHHHHHHHHHHHc-CCeEE-EEeCChhH-HHHHHHHH--------------HhcCCcEEEEEcCCCCHHH
Q 022335           15 KVALITGGGSGIGFEISTQFGKH-GASVA-IMGRRKQV-LDAAVSAL--------------RSLGIKAVGFEGDVRRQEH   77 (299)
Q Consensus        15 k~vlItGas~giG~aia~~la~~-G~~Vv-~~~r~~~~-~~~~~~~~--------------~~~~~~v~~~~~Dl~~~~~   77 (299)
                      -++.|.|++|.+|+++++...+. ++.++ .++|.... ......++              ...-.... +-.|+|.++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            36999999999999999988875 66654 34443211 00000000              00001111 4479999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCC
Q 022335           78 AKKVVESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        78 v~~~~~~~~~~~g~id~lv~~ag~  101 (299)
                      ..+.++.+.+.  ++.+|+-..|+
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99999877765  77788888875

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.36  E-value=0.91  Score=33.93  Aligned_cols=37  Identities=14%  Similarity=0.223  Sum_probs=30.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 022335           16 VALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAA   54 (299)
Q Consensus        16 ~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~   54 (299)
                      ++.|.| .|-+|..+|..|+ +|++|+++|-++...+.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            467775 7899999998665 799999999998776554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.33  E-value=4.1  Score=26.10  Aligned_cols=68  Identities=19%  Similarity=0.220  Sum_probs=45.4

Q ss_pred             EEEEecCCChHHH-HHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCccE
Q 022335           16 VALITGGGSGIGF-EISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDI   94 (299)
Q Consensus        16 ~vlItGas~giG~-aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   94 (299)
                      ++-++| -+|+|. ++|+.|.++|+.|...|+.+..   ..+.|.+.+.++. ..-|..+              ....|.
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~Gi~i~-~gh~~~~--------------i~~~d~   63 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLGIPIF-VPHSADN--------------WYDPDL   63 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTCCEE-SSCCTTS--------------CCCCSE
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCCCeEE-eeecccc--------------cCCCCE
Confidence            355554 466776 8899999999999999988643   2334666675543 1222221              136899


Q ss_pred             EEEcCCCC
Q 022335           95 LVNAAAGN  102 (299)
Q Consensus        95 lv~~ag~~  102 (299)
                      +|...++.
T Consensus        64 vV~SsAI~   71 (89)
T d1j6ua1          64 VIKTPAVR   71 (89)
T ss_dssp             EEECTTCC
T ss_pred             EEEecCcC
Confidence            99999875

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.26  E-value=3.2  Score=28.82  Aligned_cols=34  Identities=29%  Similarity=0.361  Sum_probs=26.5

Q ss_pred             CCEEEEecCCChHHHHHHHHHH----HcCCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFG----KHGASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la----~~G~~Vv~~~r~~   48 (299)
                      .++++|.|| |.+|..+|..|+    +.|.+|.++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            678888866 788988888886    3588998887643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.25  E-value=2.5  Score=29.23  Aligned_cols=76  Identities=17%  Similarity=0.182  Sum_probs=51.2

Q ss_pred             CCEEEEecCCC----------hHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Q 022335           14 GKVALITGGGS----------GIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVE   83 (299)
Q Consensus        14 ~k~vlItGas~----------giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~   83 (299)
                      -|.+||.|++.          --+...+++|.+.|++++++..|++...--    .+...++.+-+   -+.+++.++++
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd----~d~aD~lYfeP---lt~e~v~~Ii~   79 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD----PEMADATYIEP---IHWEVVRKIIE   79 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC----GGGSSEEECSC---CCHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC----hhhcceeeeec---CCHHHHHHHHH
Confidence            57899999852          235677888999999999999998542110    01223344333   45677777766


Q ss_pred             HHHHHcCCccEEEEcCCC
Q 022335           84 STFEHFGKLDILVNAAAG  101 (299)
Q Consensus        84 ~~~~~~g~id~lv~~ag~  101 (299)
                      .=     ++|.++...|.
T Consensus        80 ~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          80 KE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HH-----CCSEEECSSSH
T ss_pred             Hh-----CcCCeEEEeee
Confidence            43     89999988873

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=81.90  E-value=3.6  Score=32.03  Aligned_cols=75  Identities=17%  Similarity=0.155  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSG-IGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~g-iG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|.+||=.|+++| +..++++.+. .+.+|+.++++++.++...+.++...  .++.+...|+.+.-      .     .
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~-~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~------~-----~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------S-----D  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------C-----S
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc------c-----c
Confidence            3889999999877 4555555543 34589999999999999888887653  57999999987521      0     1


Q ss_pred             CCccEEEEcC
Q 022335           90 GKLDILVNAA   99 (299)
Q Consensus        90 g~id~lv~~a   99 (299)
                      ..+|.++.+.
T Consensus       153 ~~fD~V~ld~  162 (250)
T d1yb2a1         153 QMYDAVIADI  162 (250)
T ss_dssp             CCEEEEEECC
T ss_pred             ceeeeeeecC
Confidence            3689888753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=81.83  E-value=0.72  Score=36.82  Aligned_cols=31  Identities=16%  Similarity=0.437  Sum_probs=26.3

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-eEEEEeCCh
Q 022335           17 ALITGGGSGIGFEISTQFGKHGA-SVAIMGRRK   48 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~-~Vv~~~r~~   48 (299)
                      |+|+||+ -+|.++|.+|+++|. +|++++++.
T Consensus         4 ViIIGaG-i~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGAG-IVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECcC-HHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            7788764 889999999999996 599998864

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.23  E-value=2.9  Score=33.46  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG--ASVAIMGRRKQVLDAAVSALRS-----LGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G--~~Vv~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +-|.|||.|+++|   .++++++++.  .+|.++..+++-.+...+.+..     .+.++.++..|..      ++   +
T Consensus        89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~------~~---l  156 (295)
T d1inla_          89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGA------EY---V  156 (295)
T ss_dssp             SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH------HH---G
T ss_pred             CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHH------HH---H
Confidence            4678999999888   4567777653  5699999998877766554432     1467898888842      22   2


Q ss_pred             HHHcCCccEEEEcC
Q 022335           86 FEHFGKLDILVNAA   99 (299)
Q Consensus        86 ~~~~g~id~lv~~a   99 (299)
                      .+.-.+.|++|.-.
T Consensus       157 ~~~~~~yDvIi~D~  170 (295)
T d1inla_         157 RKFKNEFDVIIIDS  170 (295)
T ss_dssp             GGCSSCEEEEEEEC
T ss_pred             hcCCCCCCEEEEcC
Confidence            23335799999764

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.21  E-value=2.1  Score=33.67  Aligned_cols=72  Identities=14%  Similarity=0.109  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCh-HHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSG-IGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEH   88 (299)
Q Consensus        13 ~~k~vlItGas~g-iG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~   88 (299)
                      .|.++|-.||+.| ++..+    +++| ++|+.++.++...+.+.+.++..+  .++.++..|..+..           .
T Consensus       107 ~g~~VlD~~aG~G~~~l~~----a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~-----------~  171 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPI----AVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-----------G  171 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHH----HHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----------C
T ss_pred             CccEEEECcceEcHHHHHH----HHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc-----------c
Confidence            4888999888644 44444    3445 589999999998888877776554  56999999986421           1


Q ss_pred             cCCccEEEEcC
Q 022335           89 FGKLDILVNAA   99 (299)
Q Consensus        89 ~g~id~lv~~a   99 (299)
                      .+..|.+|.+.
T Consensus       172 ~~~~D~Ii~~~  182 (260)
T d2frna1         172 ENIADRILMGY  182 (260)
T ss_dssp             CSCEEEEEECC
T ss_pred             CCCCCEEEECC
Confidence            24689888763

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.18  E-value=3.9  Score=27.37  Aligned_cols=34  Identities=32%  Similarity=0.394  Sum_probs=26.0

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHc---CCeEEEEeCCh
Q 022335           14 GKVALITGGGSGIGFEISTQFGKH---GASVAIMGRRK   48 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~---G~~Vv~~~r~~   48 (299)
                      .+.++|.|| |.+|..+|..|++.   |.+|.++.+.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            467888876 68899999776654   88899988754

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=81.04  E-value=2.8  Score=32.39  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHGA-SVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      ++++||=.|++.|   ..+..+++.|. +|+++|.+++.++...+...+.+  .++.++.+|+....-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            4789999999877   23456777775 69999999998888877776554  368899999853310         011


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      +.+|+|+++.++.
T Consensus        92 ~~fD~V~~~~~l~  104 (252)
T d1ri5a_          92 KEFDVISSQFSFH  104 (252)
T ss_dssp             SCEEEEEEESCGG
T ss_pred             ccceEEEEcceee
Confidence            4699998876654

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=80.99  E-value=4.4  Score=30.95  Aligned_cols=76  Identities=20%  Similarity=0.170  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH-GASVAIMGRRKQVLDAAVSALRSLG--IKAVGFEGDVRRQEHAKKVVESTFEHF   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~-G~~Vv~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~v~~~~~~~~~~~   89 (299)
                      .|++||=+|++.|   .++..|+++ |++|+.++-++..++...+.....+  .++.++..|+.+..     .      .
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~-----~------~   98 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV-----A------N   98 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----C------S
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc-----c------c
Confidence            3789999999887   245556654 8999999999988887766666554  46999999987521     0      1


Q ss_pred             CCccEEEEcCCCC
Q 022335           90 GKLDILVNAAAGN  102 (299)
Q Consensus        90 g~id~lv~~ag~~  102 (299)
                      +++|.+++.-.+.
T Consensus        99 ~~fD~v~~~~~~~  111 (245)
T d1nkva_          99 EKCDVAACVGATW  111 (245)
T ss_dssp             SCEEEEEEESCGG
T ss_pred             CceeEEEEEehhh
Confidence            4799888776543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.62  E-value=4.2  Score=32.29  Aligned_cols=75  Identities=21%  Similarity=0.297  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHh-----cCCcEEEEEcCCCCHHHHHHHHHHH
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKH--GASVAIMGRRKQVLDAAVSALRS-----LGIKAVGFEGDVRRQEHAKKVVEST   85 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~v~~~~~~~   85 (299)
                      +-|.|||.|+++|   .+++++.+.  ..+|+++.-+++-.+...+.+..     ...++.++..|..      ++++  
T Consensus        78 ~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~------~~l~--  146 (285)
T d2o07a1          78 NPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGF------EFMK--  146 (285)
T ss_dssp             SCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH------HHHH--
T ss_pred             CcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHH------HHHh--
Confidence            4678999999887   456666665  45789999998877766655532     2468999988832      3332  


Q ss_pred             HHHcCCccEEEEcC
Q 022335           86 FEHFGKLDILVNAA   99 (299)
Q Consensus        86 ~~~~g~id~lv~~a   99 (299)
                       +.-.+.|++|.-.
T Consensus       147 -~~~~~yDvIi~D~  159 (285)
T d2o07a1         147 -QNQDAFDVIITDS  159 (285)
T ss_dssp             -TCSSCEEEEEEEC
T ss_pred             -cCCCCCCEEEEcC
Confidence             2335799999875

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=80.49  E-value=0.84  Score=35.18  Aligned_cols=32  Identities=22%  Similarity=0.508  Sum_probs=27.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCChh
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRKQ   49 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~~   49 (299)
                      |+|+||+ --|...|..|+++|.+|+++.+++.
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            7788775 6789999999999999999998754

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=80.49  E-value=0.8  Score=34.57  Aligned_cols=31  Identities=16%  Similarity=0.281  Sum_probs=27.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCeEEEEeCCh
Q 022335           17 ALITGGGSGIGFEISTQFGKHGASVAIMGRRK   48 (299)
Q Consensus        17 vlItGas~giG~aia~~la~~G~~Vv~~~r~~   48 (299)
                      ++|+|| |..|...|..+++.|.+|+++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            678887 7789999999999999999998753

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.19  E-value=2.2  Score=32.55  Aligned_cols=75  Identities=17%  Similarity=0.115  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH--c
Q 022335           13 KGKVALITGGGSGIGFEISTQFGKHG-ASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEH--F   89 (299)
Q Consensus        13 ~~k~vlItGas~giG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~--~   89 (299)
                      .|+.||=+|++.|+   .+..+++++ .+|++++.++..++...+...+...++..+..|.          ......  .
T Consensus        53 ~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~----------~~~~~~~~~  119 (229)
T d1zx0a1          53 KGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW----------EDVAPTLPD  119 (229)
T ss_dssp             TCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH----------HHHGGGSCT
T ss_pred             CCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccc----------ccccccccc
Confidence            58899999999884   456677664 6799999999888877776666566677776662          112222  2


Q ss_pred             CCccEEEEcCC
Q 022335           90 GKLDILVNAAA  100 (299)
Q Consensus        90 g~id~lv~~ag  100 (299)
                      +.+|.+++.+-
T Consensus       120 ~~fD~i~fD~~  130 (229)
T d1zx0a1         120 GHFDGILYDTY  130 (229)
T ss_dssp             TCEEEEEECCC
T ss_pred             ccccceeeccc
Confidence            57898876553

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=80.14  E-value=9  Score=31.72  Aligned_cols=85  Identities=20%  Similarity=0.157  Sum_probs=52.7

Q ss_pred             CCCCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCCh--hHHHH--------HHHHHHhcCCcEEEEEcCCCCHHHHHHH
Q 022335           12 LKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRK--QVLDA--------AVSALRSLGIKAVGFEGDVRRQEHAKKV   81 (299)
Q Consensus        12 l~~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~--~~~~~--------~~~~~~~~~~~v~~~~~Dl~~~~~v~~~   81 (299)
                      |+|-+||=.+ ..--|-..++.|+..||.|+=+-+..  +....        ........+.+=+.+.+|+.+++..+.+
T Consensus         5 L~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~   83 (417)
T d1q7ea_           5 LQGIKVLDFT-GVQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVM   83 (417)
T ss_dssp             TTTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHH
Confidence            4466655333 33447788889999999999987521  00000        0011223344567899999999886655


Q ss_pred             HHHHHHHcCCccEEEEcCCC
Q 022335           82 VESTFEHFGKLDILVNAAAG  101 (299)
Q Consensus        82 ~~~~~~~~g~id~lv~~ag~  101 (299)
                      .+=+ +   +-|++|+|.-.
T Consensus        84 ~~Li-~---~aDv~i~n~~p   99 (417)
T d1q7ea_          84 EKLI-R---EADILVENFHP   99 (417)
T ss_dssp             HHHH-H---HCSEEEECCCC
T ss_pred             HHHH-h---cCcccEeccCC
Confidence            4433 2   47999999753

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.05  E-value=6.6  Score=26.45  Aligned_cols=81  Identities=11%  Similarity=0.151  Sum_probs=54.2

Q ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCcc
Q 022335           14 GKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLD   93 (299)
Q Consensus        14 ~k~vlItGas~giG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~id   93 (299)
                      ..++||.--...+...+...|.+.|++|..+....+.    .+.+.+...++.++-..+-+.+. .+++.++++.+..+-
T Consensus         3 k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a----~~~l~~~~~dlii~D~~mp~~~G-~el~~~l~~~~~~~p   77 (123)
T d1krwa_           3 RGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEV----LAALASKTPDVLLSDIRMPGMDG-LALLKQIKQRHPMLP   77 (123)
T ss_dssp             CCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHH----HHHHTTCCCSEEEECCSSSSSTT-HHHHHHHHHHSSSCC
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHH----HHHHHhCCCCEEEehhhcCCchH-HHHHHHHHHhCCCCe
Confidence            4579999999999999999999999999877665433    33343434444444433334344 456777777776666


Q ss_pred             EEEEcC
Q 022335           94 ILVNAA   99 (299)
Q Consensus        94 ~lv~~a   99 (299)
                      +++..+
T Consensus        78 iI~~t~   83 (123)
T d1krwa_          78 VIIMTA   83 (123)
T ss_dssp             EEESCC
T ss_pred             EEEEec
Confidence            665554