Query 022336
Match_columns 299
No_of_seqs 252 out of 1415
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 03:50:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022336.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022336hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l8h_A Putative haloacid dehal 99.7 1.4E-17 4.9E-22 138.6 7.4 110 183-293 1-137 (179)
2 3ij5_A 3-deoxy-D-manno-octulos 99.7 4.7E-17 1.6E-21 144.0 8.2 129 154-293 18-159 (211)
3 2pr7_A Haloacid dehalogenase/e 99.7 8.9E-18 3E-22 132.2 2.5 101 182-293 1-110 (137)
4 3ib6_A Uncharacterized protein 99.7 2.6E-16 8.8E-21 133.8 9.3 106 181-292 1-133 (189)
5 3nvb_A Uncharacterized protein 99.6 1.2E-16 4.2E-21 155.1 7.6 108 176-293 215-347 (387)
6 2gmw_A D,D-heptose 1,7-bisphos 99.6 5.5E-16 1.9E-20 134.5 7.5 112 181-293 23-167 (211)
7 2o2x_A Hypothetical protein; s 99.6 3.9E-16 1.3E-20 135.2 6.1 128 161-293 13-173 (218)
8 3e8m_A Acylneuraminate cytidyl 99.6 4.7E-16 1.6E-20 128.3 6.0 102 181-293 2-114 (164)
9 3n07_A 3-deoxy-D-manno-octulos 99.6 5E-16 1.7E-20 135.7 5.7 102 180-292 22-134 (195)
10 2p9j_A Hypothetical protein AQ 99.6 1.1E-15 3.7E-20 125.9 7.3 103 180-293 6-119 (162)
11 2oda_A Hypothetical protein ps 99.6 9.3E-16 3.2E-20 133.0 7.1 102 181-292 4-123 (196)
12 2wm8_A MDP-1, magnesium-depend 99.6 1.1E-15 3.6E-20 129.5 7.2 103 182-292 26-155 (187)
13 3n1u_A Hydrolase, HAD superfam 99.6 1.1E-15 3.8E-20 131.8 6.5 102 180-292 16-128 (191)
14 2r8e_A 3-deoxy-D-manno-octulos 99.6 2E-15 6.7E-20 129.0 8.0 103 179-292 22-135 (188)
15 3kbb_A Phosphorylated carbohyd 99.6 7E-16 2.4E-20 130.4 5.1 82 203-293 86-176 (216)
16 2fpr_A Histidine biosynthesis 99.6 4.4E-16 1.5E-20 132.3 3.6 113 179-292 10-151 (176)
17 1k1e_A Deoxy-D-mannose-octulos 99.6 3.2E-15 1.1E-19 126.6 7.2 101 181-292 6-117 (180)
18 3mn1_A Probable YRBI family ph 99.6 3.2E-15 1.1E-19 128.3 6.9 102 180-292 16-128 (189)
19 3mmz_A Putative HAD family hyd 99.5 2.3E-15 7.8E-20 127.8 4.8 100 181-292 10-120 (176)
20 3ewi_A N-acylneuraminate cytid 99.5 6.7E-15 2.3E-19 126.4 7.5 100 179-292 5-117 (168)
21 4g9b_A Beta-PGM, beta-phosphog 99.5 2.1E-14 7E-19 126.0 5.7 81 202-293 96-185 (243)
22 2pib_A Phosphorylated carbohyd 99.5 3.7E-14 1.3E-18 116.9 6.9 84 201-293 84-176 (216)
23 2no4_A (S)-2-haloacid dehaloge 99.5 3E-14 1E-18 122.2 6.2 82 203-293 107-197 (240)
24 3um9_A Haloacid dehalogenase, 99.5 4.3E-14 1.5E-18 118.9 6.9 82 202-292 97-187 (230)
25 3m9l_A Hydrolase, haloacid deh 99.5 1.9E-14 6.6E-19 120.9 4.8 83 202-293 71-163 (205)
26 3umb_A Dehalogenase-like hydro 99.5 3E-14 1E-18 120.4 5.6 81 203-292 101-190 (233)
27 3m1y_A Phosphoserine phosphata 99.5 8.7E-14 3E-18 116.7 8.1 83 202-293 76-177 (217)
28 1zrn_A L-2-haloacid dehalogena 99.5 4.6E-14 1.6E-18 119.8 5.5 81 203-292 97-186 (232)
29 3zvl_A Bifunctional polynucleo 99.4 5.8E-14 2E-18 135.4 6.6 111 181-292 56-209 (416)
30 3kzx_A HAD-superfamily hydrola 99.4 7.1E-14 2.4E-18 118.6 6.3 82 202-292 104-195 (231)
31 3e58_A Putative beta-phosphogl 99.4 8.4E-14 2.9E-18 114.6 5.5 82 202-292 90-180 (214)
32 4ex6_A ALNB; modified rossman 99.4 9.2E-14 3.1E-18 118.1 5.5 82 202-292 105-195 (237)
33 3mc1_A Predicted phosphatase, 99.4 1.6E-13 5.5E-18 115.4 6.5 83 202-293 87-178 (226)
34 2ah5_A COG0546: predicted phos 99.4 3.1E-13 1.1E-17 115.0 8.2 81 203-293 86-173 (210)
35 4gib_A Beta-phosphoglucomutase 99.4 1.1E-13 3.8E-18 121.6 5.4 80 203-293 118-206 (250)
36 3ddh_A Putative haloacid dehal 99.4 3.1E-13 1.1E-17 112.7 7.1 81 202-292 106-193 (234)
37 3s6j_A Hydrolase, haloacid deh 99.4 1.6E-13 5.6E-18 115.3 5.2 82 202-292 92-182 (233)
38 3iru_A Phoshonoacetaldehyde hy 99.4 3.1E-13 1.1E-17 116.8 6.3 83 202-293 112-205 (277)
39 3nuq_A Protein SSM1, putative 99.4 2.6E-13 9.1E-18 119.9 5.8 82 202-292 143-240 (282)
40 2nyv_A Pgpase, PGP, phosphogly 99.4 3.8E-13 1.3E-17 115.4 6.5 82 202-292 84-174 (222)
41 3qnm_A Haloacid dehalogenase-l 99.4 5.1E-13 1.7E-17 112.4 6.8 81 202-292 108-198 (240)
42 4eze_A Haloacid dehalogenase-l 99.4 6E-13 2E-17 124.1 7.7 83 202-293 180-281 (317)
43 4eek_A Beta-phosphoglucomutase 99.4 4.5E-13 1.5E-17 116.2 6.2 82 202-292 111-203 (259)
44 2b0c_A Putative phosphatase; a 99.4 3.2E-14 1.1E-18 118.4 -1.5 87 202-292 92-183 (206)
45 3nas_A Beta-PGM, beta-phosphog 99.4 3.1E-13 1.1E-17 114.5 4.5 81 202-293 93-182 (233)
46 3sd7_A Putative phosphatase; s 99.4 4.1E-13 1.4E-17 114.9 5.2 82 202-292 111-202 (240)
47 1qq5_A Protein (L-2-haloacid d 99.4 7.4E-13 2.5E-17 115.2 6.8 80 203-293 95-183 (253)
48 3i28_A Epoxide hydrolase 2; ar 99.4 3.9E-13 1.3E-17 125.3 5.2 89 202-293 101-196 (555)
49 3k1z_A Haloacid dehalogenase-l 99.3 5.2E-13 1.8E-17 117.6 5.3 81 202-292 107-197 (263)
50 3dv9_A Beta-phosphoglucomutase 99.3 5.5E-13 1.9E-17 113.3 5.2 81 202-292 109-200 (247)
51 4dcc_A Putative haloacid dehal 99.3 3.7E-13 1.3E-17 115.2 3.9 81 203-293 114-209 (229)
52 3fvv_A Uncharacterized protein 99.3 1.8E-12 6.3E-17 110.5 8.1 82 202-292 93-196 (232)
53 3u26_A PF00702 domain protein; 99.3 7.4E-13 2.5E-17 111.6 5.4 80 203-292 102-191 (234)
54 3ed5_A YFNB; APC60080, bacillu 99.3 1.6E-12 5.4E-17 109.6 7.2 81 202-292 104-195 (238)
55 2b82_A APHA, class B acid phos 99.3 1.4E-13 4.8E-18 120.7 0.5 107 177-292 31-176 (211)
56 2w43_A Hypothetical 2-haloalka 99.3 7E-13 2.4E-17 111.0 4.6 78 202-292 75-161 (201)
57 3qxg_A Inorganic pyrophosphata 99.3 7.4E-13 2.5E-17 113.7 4.7 82 202-293 110-202 (243)
58 3umg_A Haloacid dehalogenase; 99.3 1.5E-12 5E-17 110.5 6.1 80 203-292 118-204 (254)
59 2i6x_A Hydrolase, haloacid deh 99.3 5.1E-13 1.8E-17 111.8 3.3 80 204-293 92-186 (211)
60 2hsz_A Novel predicted phospha 99.3 1.8E-12 6.3E-17 112.8 6.8 80 204-292 117-205 (243)
61 3p96_A Phosphoserine phosphata 99.3 2.5E-12 8.5E-17 122.4 6.5 83 202-293 257-358 (415)
62 3kd3_A Phosphoserine phosphohy 99.3 3.5E-12 1.2E-16 105.6 6.4 81 202-291 83-181 (219)
63 3umc_A Haloacid dehalogenase; 99.3 2.4E-12 8.2E-17 110.1 5.6 80 203-292 122-208 (254)
64 2ho4_A Haloacid dehalogenase-l 99.3 8.1E-12 2.8E-16 107.9 8.9 47 181-230 5-51 (259)
65 1nnl_A L-3-phosphoserine phosp 99.3 1.1E-11 3.9E-16 105.4 9.2 81 202-293 87-190 (225)
66 3smv_A S-(-)-azetidine-2-carbo 99.3 5.2E-12 1.8E-16 105.9 6.8 81 202-292 100-191 (240)
67 1vjr_A 4-nitrophenylphosphatas 99.3 7.7E-12 2.6E-16 109.8 7.9 48 181-231 15-62 (271)
68 3vay_A HAD-superfamily hydrola 99.3 3.2E-12 1.1E-16 107.7 5.1 76 202-292 106-191 (230)
69 3epr_A Hydrolase, haloacid deh 99.3 7.3E-12 2.5E-16 110.8 7.4 47 182-231 4-50 (264)
70 3d6j_A Putative haloacid dehal 99.2 7.1E-12 2.4E-16 104.1 6.2 81 203-292 91-180 (225)
71 1rku_A Homoserine kinase; phos 99.2 5.7E-12 2E-16 105.8 5.6 81 202-292 70-163 (206)
72 3l5k_A Protein GS1, haloacid d 99.2 4.4E-12 1.5E-16 109.3 4.8 83 202-293 113-209 (250)
73 2g80_A Protein UTR4; YEL038W, 99.2 1.5E-11 5E-16 111.2 8.3 67 218-292 137-222 (253)
74 2hdo_A Phosphoglycolate phosph 99.2 3.2E-12 1.1E-16 107.0 3.6 80 203-292 85-173 (209)
75 1l7m_A Phosphoserine phosphata 99.2 1.8E-11 6.1E-16 101.3 7.2 82 202-292 77-177 (211)
76 2oyc_A PLP phosphatase, pyrido 99.2 3.8E-11 1.3E-15 108.8 8.8 58 171-231 7-66 (306)
77 2i33_A Acid phosphatase; HAD s 99.2 3.1E-11 1.1E-15 110.0 8.0 102 180-291 56-189 (258)
78 2fi1_A Hydrolase, haloacid deh 99.2 2.6E-11 9E-16 99.5 6.5 79 202-292 83-170 (190)
79 3qgm_A P-nitrophenyl phosphata 99.2 5.6E-11 1.9E-15 104.4 8.9 45 182-229 7-51 (268)
80 1yv9_A Hydrolase, haloacid deh 99.2 5.6E-11 1.9E-15 104.2 8.7 47 182-231 4-50 (264)
81 2fea_A 2-hydroxy-3-keto-5-meth 99.2 1E-11 3.5E-16 107.9 3.9 81 202-293 78-182 (236)
82 3pdw_A Uncharacterized hydrola 99.2 2.5E-11 8.6E-16 106.8 5.8 46 182-230 5-50 (266)
83 1swv_A Phosphonoacetaldehyde h 99.1 3E-11 1E-15 104.8 5.6 79 205-292 107-196 (267)
84 2x4d_A HLHPP, phospholysine ph 99.1 1.5E-10 5E-15 99.6 9.3 49 182-231 11-61 (271)
85 1l6r_A Hypothetical protein TA 99.1 1.6E-10 5.4E-15 101.8 9.2 59 182-250 4-62 (227)
86 2qlt_A (DL)-glycerol-3-phospha 99.1 8.2E-11 2.8E-15 104.4 5.4 80 204-292 117-212 (275)
87 3n28_A Phosphoserine phosphata 99.1 9.2E-11 3.1E-15 108.0 5.9 82 202-292 179-279 (335)
88 3a1c_A Probable copper-exporti 99.1 6.3E-10 2.2E-14 100.5 10.4 104 177-292 137-242 (287)
89 1wr8_A Phosphoglycolate phosph 99.1 5.8E-10 2E-14 97.3 9.8 44 183-228 3-46 (231)
90 2hi0_A Putative phosphoglycola 99.0 1E-10 3.5E-15 101.1 4.6 86 199-293 108-201 (240)
91 3skx_A Copper-exporting P-type 99.0 5.8E-10 2E-14 97.1 8.7 78 201-292 144-223 (280)
92 2c4n_A Protein NAGD; nucleotid 99.0 7.2E-10 2.5E-14 93.4 8.7 46 182-230 2-47 (250)
93 2fdr_A Conserved hypothetical 99.0 7.9E-11 2.7E-15 98.8 2.6 67 218-292 100-178 (229)
94 2p11_A Hypothetical protein; p 99.0 7.3E-11 2.5E-15 101.7 1.9 78 202-292 97-182 (231)
95 2hx1_A Predicted sugar phospha 99.0 6.2E-10 2.1E-14 99.2 7.9 47 181-230 12-58 (284)
96 3dnp_A Stress response protein 99.0 1.4E-09 4.8E-14 96.5 9.4 46 181-228 4-49 (290)
97 4dw8_A Haloacid dehalogenase-l 99.0 2.3E-09 7.9E-14 94.6 10.4 46 181-228 3-48 (279)
98 2hoq_A Putative HAD-hydrolase 99.0 7.5E-10 2.6E-14 95.0 6.8 84 200-292 93-186 (241)
99 3ocu_A Lipoprotein E; hydrolas 99.0 1.1E-09 3.7E-14 101.4 7.9 103 181-291 56-190 (262)
100 1yns_A E-1 enzyme; hydrolase f 98.9 7.8E-10 2.7E-14 98.9 6.3 84 199-292 128-222 (261)
101 1ltq_A Polynucleotide kinase; 98.9 7.8E-10 2.7E-14 99.7 6.3 104 183-292 159-288 (301)
102 3fzq_A Putative hydrolase; YP_ 98.9 1.2E-09 4.3E-14 95.4 7.0 44 183-228 5-48 (274)
103 3cnh_A Hydrolase family protei 98.9 5.2E-10 1.8E-14 92.9 4.1 82 201-292 86-176 (200)
104 3mpo_A Predicted hydrolase of 98.9 2.4E-09 8.3E-14 94.5 8.5 46 181-228 3-48 (279)
105 2i7d_A 5'(3')-deoxyribonucleot 98.9 6.9E-11 2.3E-15 100.1 -1.7 74 201-291 73-151 (193)
106 2gfh_A Haloacid dehalogenase-l 98.9 1E-09 3.5E-14 97.4 5.8 83 200-292 120-212 (260)
107 3pct_A Class C acid phosphatas 98.9 1.9E-09 6.5E-14 99.6 7.7 100 184-290 59-189 (260)
108 2hhl_A CTD small phosphatase-l 98.9 5.6E-10 1.9E-14 98.0 3.1 105 178-292 23-155 (195)
109 3pgv_A Haloacid dehalogenase-l 98.9 5.3E-09 1.8E-13 93.6 8.7 52 175-228 13-64 (285)
110 2ght_A Carboxy-terminal domain 98.8 7.7E-10 2.6E-14 95.6 2.1 102 180-291 12-141 (181)
111 3gyg_A NTD biosynthesis operon 98.8 6E-09 2.1E-13 93.0 6.7 36 257-292 209-245 (289)
112 4ap9_A Phosphoserine phosphata 98.8 6.1E-10 2.1E-14 91.3 0.0 80 202-293 80-169 (201)
113 3r4c_A Hydrolase, haloacid deh 98.8 9.8E-09 3.3E-13 90.0 7.7 46 182-228 11-56 (268)
114 2pke_A Haloacid delahogenase-l 98.8 5.2E-09 1.8E-13 90.3 5.8 83 199-292 110-198 (251)
115 1te2_A Putative phosphatase; s 98.8 6.3E-09 2.2E-13 86.2 5.7 83 201-292 94-185 (226)
116 2om6_A Probable phosphoserine 98.8 9.3E-09 3.2E-13 86.0 6.5 86 201-292 99-194 (235)
117 3dao_A Putative phosphatse; st 98.8 1.9E-08 6.4E-13 90.1 8.5 52 176-228 14-65 (283)
118 1q92_A 5(3)-deoxyribonucleotid 98.7 2.7E-10 9.3E-15 96.9 -3.7 73 202-291 76-153 (197)
119 1qyi_A ZR25, hypothetical prot 98.7 3.9E-09 1.3E-13 101.9 3.9 85 199-292 213-333 (384)
120 3l7y_A Putative uncharacterize 98.7 9.4E-09 3.2E-13 93.0 6.2 46 181-228 35-81 (304)
121 2go7_A Hydrolase, haloacid deh 98.7 6.3E-09 2.1E-13 84.6 4.5 84 199-292 83-175 (207)
122 2zg6_A Putative uncharacterize 98.7 9.4E-09 3.2E-13 87.6 5.3 81 200-293 94-184 (220)
123 2wf7_A Beta-PGM, beta-phosphog 98.7 8.7E-09 3E-13 85.6 4.0 82 200-292 90-180 (221)
124 2hcf_A Hydrolase, haloacid deh 98.7 8.7E-09 3E-13 86.6 4.0 85 200-292 92-188 (234)
125 2pq0_A Hypothetical conserved 98.7 3.6E-08 1.2E-12 86.4 7.7 45 182-228 2-46 (258)
126 1zjj_A Hypothetical protein PH 98.6 6.4E-08 2.2E-12 85.5 6.5 110 176-292 96-221 (263)
127 3zx4_A MPGP, mannosyl-3-phosph 98.5 1.1E-07 3.9E-12 83.7 6.2 41 185-228 2-42 (259)
128 2jc9_A Cytosolic purine 5'-nuc 98.5 2.2E-07 7.4E-12 94.0 8.5 80 202-291 247-380 (555)
129 2obb_A Hypothetical protein; s 98.5 1.1E-07 3.9E-12 80.4 4.6 97 182-286 2-101 (142)
130 2yj3_A Copper-transporting ATP 97.8 2.2E-08 7.5E-13 89.9 0.0 97 186-293 119-217 (263)
131 1zjj_A Hypothetical protein PH 98.3 1.5E-06 5.2E-11 76.6 8.6 60 183-250 1-60 (263)
132 4fe3_A Cytosolic 5'-nucleotida 98.3 1.5E-06 5.1E-11 78.7 7.2 82 201-291 141-247 (297)
133 3kc2_A Uncharacterized protein 98.2 1.6E-06 5.4E-11 82.6 6.1 63 181-250 11-73 (352)
134 3j08_A COPA, copper-exporting 98.1 1.4E-05 4.8E-10 81.5 12.2 99 177-287 431-531 (645)
135 1xvi_A MPGP, YEDP, putative ma 98.1 3.5E-06 1.2E-10 75.6 6.8 59 181-249 7-65 (275)
136 1xpj_A Hypothetical protein; s 98.1 3.4E-06 1.2E-10 68.3 5.3 45 183-228 1-50 (126)
137 1rkq_A Hypothetical protein YI 98.1 3.5E-06 1.2E-10 75.6 5.9 57 183-249 5-61 (282)
138 3j09_A COPA, copper-exporting 98.1 2.2E-05 7.4E-10 81.0 12.2 99 176-286 508-608 (723)
139 3rfu_A Copper efflux ATPase; a 98.1 1.1E-05 3.6E-10 83.9 9.7 106 176-292 527-637 (736)
140 1nrw_A Hypothetical protein, h 98.0 8.7E-06 3E-10 72.9 7.3 57 183-249 4-60 (288)
141 1nf2_A Phosphatase; structural 98.0 8.5E-06 2.9E-10 72.3 6.5 56 183-249 2-57 (268)
142 2b30_A Pvivax hypothetical pro 98.0 9.4E-06 3.2E-10 74.1 6.3 59 181-248 25-85 (301)
143 2zos_A MPGP, mannosyl-3-phosph 97.9 7.1E-06 2.4E-10 72.4 4.7 55 183-249 2-56 (249)
144 1rlm_A Phosphatase; HAD family 97.9 9.5E-06 3.2E-10 72.0 4.8 45 182-228 2-47 (271)
145 1u02_A Trehalose-6-phosphate p 97.8 1.3E-05 4.4E-10 70.5 4.8 55 183-247 1-59 (239)
146 3f9r_A Phosphomannomutase; try 97.8 2.7E-05 9.1E-10 69.4 6.3 45 182-228 3-47 (246)
147 3bwv_A Putative 5'(3')-deoxyri 97.8 5.1E-05 1.7E-09 62.9 7.2 66 202-286 70-140 (180)
148 3qle_A TIM50P; chaperone, mito 97.7 8.7E-06 3E-10 72.5 2.0 103 181-293 32-150 (204)
149 2amy_A PMM 2, phosphomannomuta 97.5 8.1E-05 2.8E-09 65.0 5.3 46 180-228 3-48 (246)
150 2rbk_A Putative uncharacterize 97.5 8E-05 2.7E-09 65.3 4.9 44 184-228 3-46 (261)
151 2fue_A PMM 1, PMMH-22, phospho 97.4 0.00018 6.1E-09 63.8 5.2 47 179-228 9-55 (262)
152 3ef0_A RNA polymerase II subun 97.3 9.1E-05 3.1E-09 71.4 3.2 102 174-286 9-156 (372)
153 3ar4_A Sarcoplasmic/endoplasmi 97.1 0.0018 6.2E-08 68.8 10.9 82 200-292 602-717 (995)
154 2zxe_A Na, K-ATPase alpha subu 97.0 0.0035 1.2E-07 67.1 11.5 41 201-250 599-639 (1028)
155 1mhs_A Proton pump, plasma mem 96.9 0.0026 9E-08 67.7 9.4 105 176-293 503-648 (920)
156 1s2o_A SPP, sucrose-phosphatas 96.8 0.00051 1.8E-08 60.3 2.8 52 185-248 5-56 (244)
157 3shq_A UBLCP1; phosphatase, hy 96.7 0.0013 4.4E-08 62.1 4.4 97 181-287 138-260 (320)
158 2rbk_A Putative uncharacterize 96.5 0.0021 7.1E-08 56.2 4.6 36 257-292 185-221 (261)
159 3b8c_A ATPase 2, plasma membra 96.3 0.0043 1.5E-07 65.7 6.4 98 176-286 448-592 (885)
160 1rlm_A Phosphatase; HAD family 96.0 0.004 1.4E-07 55.0 3.8 34 258-291 190-224 (271)
161 4g63_A Cytosolic IMP-GMP speci 96.0 0.01 3.4E-07 59.1 7.0 80 203-291 188-313 (470)
162 3ixz_A Potassium-transporting 95.8 0.032 1.1E-06 59.7 10.3 41 200-249 603-643 (1034)
163 4gxt_A A conserved functionall 95.4 0.0049 1.7E-07 59.2 1.9 42 199-249 219-260 (385)
164 3kc2_A Uncharacterized protein 95.4 0.012 4.2E-07 55.7 4.5 21 273-293 289-310 (352)
165 2pke_A Haloacid delahogenase-l 94.7 0.008 2.7E-07 51.3 1.0 38 182-221 12-49 (251)
166 2hcf_A Hydrolase, haloacid deh 94.2 0.015 5.3E-07 48.1 1.6 14 182-195 3-16 (234)
167 2b30_A Pvivax hypothetical pro 93.7 0.13 4.5E-06 46.5 6.9 29 262-290 228-256 (301)
168 2go7_A Hydrolase, haloacid deh 93.5 0.017 5.8E-07 46.2 0.7 14 182-195 3-16 (207)
169 1nf2_A Phosphatase; structural 93.5 0.017 5.9E-07 50.8 0.7 30 262-291 194-223 (268)
170 3ef1_A RNA polymerase II subun 93.5 0.048 1.7E-06 53.8 3.9 101 173-286 16-164 (442)
171 1te2_A Putative phosphatase; s 93.1 0.023 7.9E-07 46.4 0.8 14 182-195 8-21 (226)
172 1nrw_A Hypothetical protein, h 92.8 0.033 1.1E-06 49.5 1.4 30 262-291 220-249 (288)
173 2wf7_A Beta-PGM, beta-phosphog 92.8 0.02 6.8E-07 46.8 0.0 13 183-195 2-14 (221)
174 1rkq_A Hypothetical protein YI 92.5 0.039 1.3E-06 49.0 1.5 30 262-291 202-231 (282)
175 2om6_A Probable phosphoserine 92.4 0.027 9.2E-07 46.4 0.4 13 183-195 4-16 (235)
176 1s2o_A SPP, sucrose-phosphatas 92.4 0.048 1.7E-06 47.6 1.9 41 250-291 155-195 (244)
177 2gfh_A Haloacid dehalogenase-l 92.4 0.04 1.4E-06 48.3 1.4 15 181-195 16-30 (260)
178 2zg6_A Putative uncharacterize 92.3 0.062 2.1E-06 45.1 2.4 14 182-195 2-15 (220)
179 2hi0_A Putative phosphoglycola 92.3 0.07 2.4E-06 45.4 2.8 14 182-195 3-16 (240)
180 2hoq_A Putative HAD-hydrolase 92.2 0.038 1.3E-06 46.7 1.0 13 183-195 2-14 (241)
181 3cnh_A Hydrolase family protei 92.1 0.075 2.6E-06 43.3 2.6 15 182-196 3-17 (200)
182 1y8a_A Hypothetical protein AF 91.9 0.044 1.5E-06 50.1 1.1 39 201-249 103-141 (332)
183 1y8a_A Hypothetical protein AF 91.5 0.016 5.6E-07 52.9 -2.1 21 271-291 214-238 (332)
184 3a1c_A Probable copper-exporti 91.2 0.16 5.4E-06 45.2 4.0 19 182-201 31-49 (287)
185 2zos_A MPGP, mannosyl-3-phosph 87.7 0.16 5.5E-06 44.2 1.2 33 255-288 177-210 (249)
186 1yns_A E-1 enzyme; hydrolase f 84.8 0.27 9.1E-06 43.3 1.1 14 182-195 9-22 (261)
187 1xvi_A MPGP, YEDP, putative ma 83.0 0.22 7.6E-06 44.1 -0.2 27 262-288 193-222 (275)
188 2yj3_A Copper-transporting ATP 83.3 0.25 8.6E-06 43.7 0.0 20 181-201 26-45 (263)
189 4as2_A Phosphorylcholine phosp 74.8 2.2 7.4E-05 39.9 3.8 43 199-250 141-187 (327)
190 3huu_A Transcription regulator 68.5 14 0.00046 32.1 7.3 52 175-229 99-155 (305)
191 1yv9_A Hydrolase, haloacid deh 68.2 3.4 0.00012 35.3 3.2 112 176-292 101-219 (264)
192 3c5c_A RAS-like protein 12; GD 67.0 23 0.0008 28.5 8.0 72 178-256 89-166 (187)
193 3a21_A Putative secreted alpha 66.2 35 0.0012 34.2 10.6 69 137-226 21-98 (614)
194 4do4_A Alpha-N-acetylgalactosa 65.6 6.3 0.00022 36.7 4.8 73 178-253 50-137 (400)
195 1uas_A Alpha-galactosidase; TI 65.5 19 0.00066 33.5 8.1 96 137-253 18-128 (362)
196 4dsu_A GTPase KRAS, isoform 2B 60.4 54 0.0019 25.5 8.9 77 176-259 71-150 (189)
197 3ipz_A Monothiol glutaredoxin- 59.4 46 0.0016 25.3 8.0 81 202-284 3-83 (109)
198 3hcw_A Maltose operon transcri 58.9 38 0.0013 29.1 8.3 54 175-229 84-142 (295)
199 2fue_A PMM 1, PMMH-22, phospho 58.1 8.1 0.00028 33.5 3.8 33 251-287 191-227 (262)
200 3clv_A RAB5 protein, putative; 57.5 51 0.0017 25.8 8.2 76 177-259 113-188 (208)
201 1g16_A RAS-related protein SEC 56.1 55 0.0019 24.9 8.1 56 204-259 92-149 (170)
202 3q85_A GTP-binding protein REM 55.0 66 0.0022 24.6 8.4 75 178-259 73-151 (169)
203 2ce2_X GTPase HRAS; signaling 53.8 67 0.0023 24.1 8.5 75 178-259 72-149 (166)
204 3uma_A Hypothetical peroxiredo 53.3 9.5 0.00032 32.1 3.3 98 160-273 30-136 (184)
205 3fst_A 5,10-methylenetetrahydr 53.0 34 0.0012 31.7 7.4 90 196-286 31-124 (304)
206 1z5z_A Helicase of the SNF2/RA 53.0 69 0.0024 28.4 9.2 82 207-296 102-190 (271)
207 2yc2_C IFT27, small RAB-relate 50.5 40 0.0014 26.9 6.6 55 204-258 113-174 (208)
208 3ctl_A D-allulose-6-phosphate 49.9 17 0.00059 32.1 4.6 95 167-273 4-108 (231)
209 3zyw_A Glutaredoxin-3; metal b 49.5 86 0.0029 24.0 8.5 78 204-284 3-81 (111)
210 3sgz_A Hydroxyacid oxidase 2; 49.5 1.7E+02 0.006 27.5 11.9 18 178-195 144-161 (352)
211 3r7f_A Aspartate carbamoyltran 49.4 1.1E+02 0.0038 28.4 10.2 95 177-285 57-158 (304)
212 3a5v_A Alpha-galactosidase; be 49.1 16 0.00054 34.8 4.5 95 137-253 18-127 (397)
213 3cph_A RAS-related protein SEC 47.8 81 0.0028 25.3 8.1 78 175-259 87-166 (213)
214 3hdg_A Uncharacterized protein 47.3 82 0.0028 23.2 8.3 44 176-228 45-89 (137)
215 3clk_A Transcription regulator 46.9 46 0.0016 28.4 6.8 52 175-228 81-135 (290)
216 2amy_A PMM 2, phosphomannomuta 46.5 8.6 0.00029 32.8 2.0 23 262-287 192-218 (246)
217 3gt7_A Sensor protein; structu 45.9 98 0.0033 23.6 8.9 44 176-228 45-91 (154)
218 1qyi_A ZR25, hypothetical prot 45.6 6.3 0.00022 37.6 1.1 13 183-195 1-13 (384)
219 2kln_A Probable sulphate-trans 45.4 45 0.0016 25.8 6.0 56 182-250 47-102 (130)
220 3zxn_A RSBS, anti-sigma-factor 44.8 36 0.0012 26.7 5.3 58 180-250 40-97 (123)
221 3cbq_A GTP-binding protein REM 44.8 1.1E+02 0.0038 24.7 8.6 86 178-270 94-186 (195)
222 3kht_A Response regulator; PSI 44.5 95 0.0033 23.1 8.5 44 176-228 45-91 (144)
223 3k4h_A Putative transcriptiona 44.0 65 0.0022 27.2 7.3 53 175-229 85-142 (292)
224 2gf9_A RAS-related protein RAB 44.0 88 0.003 24.7 7.7 56 204-259 111-169 (189)
225 3con_A GTPase NRAS; structural 43.2 1E+02 0.0035 24.2 8.0 71 182-259 94-167 (190)
226 3dz8_A RAS-related protein RAB 43.2 90 0.0031 24.8 7.7 71 182-259 97-170 (191)
227 3cg0_A Response regulator rece 43.2 95 0.0033 22.7 8.8 45 176-228 48-92 (140)
228 3bc1_A RAS-related protein RAB 43.2 1.1E+02 0.0038 23.7 8.1 57 204-260 110-170 (195)
229 4a8t_A Putrescine carbamoyltra 43.1 1.5E+02 0.0052 27.9 10.2 96 173-283 79-184 (339)
230 3hg3_A Alpha-galactosidase A; 43.0 26 0.00088 34.0 5.0 89 142-253 33-137 (404)
231 2pwj_A Mitochondrial peroxired 42.9 44 0.0015 27.1 5.8 78 161-249 12-102 (171)
232 1mio_B Nitrogenase molybdenum 42.8 14 0.00049 35.6 3.2 71 177-253 190-263 (458)
233 2l5o_A Putative thioredoxin; s 42.2 75 0.0026 24.0 6.8 104 161-280 7-112 (153)
234 1x3s_A RAS-related protein RAB 42.0 81 0.0028 24.7 7.2 57 204-260 104-163 (195)
235 3tkl_A RAS-related protein RAB 42.0 1.1E+02 0.0039 23.9 8.1 76 177-259 85-163 (196)
236 2nzj_A GTP-binding protein REM 42.0 1.1E+02 0.0038 23.3 7.8 69 184-259 81-153 (175)
237 3qk7_A Transcriptional regulat 41.9 40 0.0014 29.0 5.6 52 175-229 81-137 (294)
238 4ep1_A Otcase, ornithine carba 41.8 1.8E+02 0.0062 27.4 10.5 92 177-283 91-188 (340)
239 3huu_A Transcription regulator 41.4 1.6E+02 0.0056 25.1 9.6 72 208-282 97-184 (305)
240 2fg5_A RAB-22B, RAS-related pr 40.6 77 0.0026 25.3 6.9 75 178-259 93-170 (192)
241 4a8p_A Putrescine carbamoyltra 40.5 1.5E+02 0.0053 28.1 9.9 96 173-283 57-162 (355)
242 1dxh_A Ornithine carbamoyltran 40.5 1.7E+02 0.006 27.4 10.2 92 177-283 66-164 (335)
243 3g85_A Transcriptional regulat 40.1 43 0.0015 28.4 5.5 45 179-228 88-137 (289)
244 3kkq_A RAS-related protein M-R 40.0 1.2E+02 0.004 23.6 7.8 75 176-257 85-163 (183)
245 2inb_A Hypothetical protein; Z 40.0 3.1 0.00011 35.2 -1.8 56 132-192 71-132 (140)
246 4amu_A Ornithine carbamoyltran 39.8 1.8E+02 0.0062 27.7 10.2 93 177-284 92-190 (365)
247 1qgu_B Protein (nitrogenase mo 39.2 43 0.0015 33.0 6.0 67 177-253 239-311 (519)
248 4f2g_A Otcase 1, ornithine car 38.7 2.4E+02 0.0082 26.1 11.5 92 177-283 66-163 (309)
249 3tb6_A Arabinose metabolism tr 38.5 61 0.0021 27.3 6.2 52 176-228 93-147 (298)
250 4dkx_A RAS-related protein RAB 38.4 60 0.002 27.7 6.2 83 181-270 86-174 (216)
251 3bbl_A Regulatory protein of L 38.4 1.2E+02 0.0041 25.7 8.1 51 175-228 80-135 (287)
252 3q9s_A DNA-binding response re 38.3 1.8E+02 0.0062 24.5 10.5 44 176-228 75-118 (249)
253 2zay_A Response regulator rece 38.1 1.2E+02 0.0042 22.5 8.9 44 176-228 46-92 (147)
254 1duv_G Octase-1, ornithine tra 37.6 2.1E+02 0.0073 26.8 10.3 92 177-283 65-164 (333)
255 3oes_A GTPase rhebl1; small GT 37.5 1.5E+02 0.0051 23.7 8.2 56 204-259 112-171 (201)
256 1jfx_A 1,4-beta-N-acetylmurami 37.5 55 0.0019 28.1 5.8 69 171-247 15-83 (217)
257 3lrk_A Alpha-galactosidase 1; 36.9 30 0.001 34.4 4.4 93 137-253 39-147 (479)
258 3cc1_A BH1870 protein, putativ 36.9 89 0.003 29.9 7.7 69 136-226 20-115 (433)
259 2fu5_C RAS-related protein RAB 36.8 1.2E+02 0.0041 23.5 7.4 55 204-258 97-154 (183)
260 3hzh_A Chemotaxis response reg 36.8 1.4E+02 0.0048 22.8 9.0 60 176-252 75-137 (157)
261 1tp9_A Peroxiredoxin, PRX D (t 36.7 1.5E+02 0.0053 23.2 8.4 56 204-273 57-115 (162)
262 3kke_A LACI family transcripti 36.6 1.3E+02 0.0046 25.7 8.2 52 175-229 88-142 (303)
263 2g2c_A Putative molybdenum cof 36.6 74 0.0025 26.3 6.3 37 204-241 56-92 (167)
264 2x8r_A Glycosyl hydrolase; pep 36.2 46 0.0016 28.5 5.1 67 172-248 15-83 (210)
265 3gv0_A Transcriptional regulat 35.9 1.2E+02 0.0043 25.6 7.8 52 175-229 82-138 (288)
266 2wag_A Lysozyme, putative; hyd 35.8 46 0.0016 29.0 5.0 66 172-248 27-94 (220)
267 1szn_A Alpha-galactosidase; (b 35.8 36 0.0012 32.7 4.7 94 137-253 21-130 (417)
268 2ka5_A Putative anti-sigma fac 35.2 56 0.0019 25.2 5.0 57 181-250 50-106 (125)
269 1z3i_X Similar to RAD54-like; 35.2 1.3E+02 0.0045 29.8 8.9 81 210-296 408-494 (644)
270 3hdv_A Response regulator; PSI 35.0 1.3E+02 0.0045 21.9 8.2 43 177-228 46-91 (136)
271 1jvn_A Glutamine, bifunctional 35.0 2.1E+02 0.0072 28.2 10.3 83 176-273 459-549 (555)
272 3jvd_A Transcriptional regulat 35.0 1E+02 0.0036 27.1 7.4 52 175-229 129-185 (333)
273 4h31_A Otcase, ornithine carba 34.9 2.8E+02 0.0097 26.1 10.7 96 173-283 86-190 (358)
274 3can_A Pyruvate-formate lyase- 34.9 38 0.0013 27.5 4.1 43 197-246 11-54 (182)
275 3gx8_A Monothiol glutaredoxin- 34.7 1.6E+02 0.0054 22.8 9.8 79 203-284 2-84 (121)
276 3gd5_A Otcase, ornithine carba 34.6 2.1E+02 0.0072 26.7 9.7 91 178-283 70-166 (323)
277 3kwp_A Predicted methyltransfe 34.5 1E+02 0.0035 28.1 7.4 58 218-282 88-148 (296)
278 3tpf_A Otcase, ornithine carba 34.4 2.7E+02 0.0092 25.7 10.3 92 177-283 57-155 (307)
279 3m6m_D Sensory/regulatory prot 34.4 1.5E+02 0.005 22.3 9.1 76 176-271 52-134 (143)
280 3u7q_B Nitrogenase molybdenum- 33.8 45 0.0015 33.0 5.1 68 177-253 243-315 (523)
281 3f6p_A Transcriptional regulat 33.6 1.3E+02 0.0046 21.6 9.6 44 176-228 40-83 (120)
282 1zq6_A Otcase, ornithine carba 33.5 3E+02 0.01 26.1 10.6 100 177-282 79-200 (359)
283 2i6u_A Otcase, ornithine carba 33.5 2.9E+02 0.0099 25.5 11.1 92 177-283 60-157 (307)
284 1sbo_A Putative anti-sigma fac 33.3 79 0.0027 22.9 5.4 53 184-249 45-97 (110)
285 2gf0_A GTP-binding protein DI- 33.3 1.4E+02 0.0049 23.3 7.4 42 218-259 114-155 (199)
286 3mng_A Peroxiredoxin-5, mitoch 33.2 81 0.0028 26.0 6.0 79 161-250 20-103 (173)
287 3cnb_A DNA-binding response re 33.1 1.4E+02 0.0048 21.8 9.0 44 176-228 48-94 (143)
288 4gqc_A Thiol peroxidase, perox 32.8 14 0.00049 29.9 1.2 97 161-272 10-108 (164)
289 3grc_A Sensor protein, kinase; 32.6 1.5E+02 0.005 21.8 7.0 44 176-228 44-90 (140)
290 1u02_A Trehalose-6-phosphate p 32.5 13 0.00043 31.9 0.8 20 262-286 164-183 (239)
291 1we0_A Alkyl hydroperoxide red 32.5 59 0.002 26.2 4.9 92 162-273 7-111 (187)
292 3q72_A GTP-binding protein RAD 32.5 1.5E+02 0.0052 22.3 7.2 73 179-258 71-147 (166)
293 4as2_A Phosphorylcholine phosp 32.3 14 0.00047 34.4 1.1 12 184-195 26-37 (327)
294 1qkk_A DCTD, C4-dicarboxylate 32.3 1.6E+02 0.0055 22.1 7.7 41 179-228 44-85 (155)
295 2ef0_A Ornithine carbamoyltran 32.2 3E+02 0.01 25.3 10.5 92 177-283 66-163 (301)
296 2jc9_A Cytosolic purine 5'-nuc 32.2 22 0.00074 36.1 2.6 39 180-220 62-102 (555)
297 2a5j_A RAS-related protein RAB 32.1 1.9E+02 0.0064 22.8 8.4 78 175-259 88-168 (191)
298 1pvv_A Otcase, ornithine carba 32.0 3E+02 0.01 25.5 10.2 92 177-283 67-164 (315)
299 2atv_A RERG, RAS-like estrogen 31.8 1.6E+02 0.0053 23.4 7.4 74 179-259 97-174 (196)
300 3mwy_W Chromo domain-containin 31.8 95 0.0032 31.8 7.3 82 208-296 563-650 (800)
301 3o74_A Fructose transport syst 31.7 62 0.0021 26.9 5.1 52 175-229 75-131 (272)
302 1vjr_A 4-nitrophenylphosphatas 31.7 29 0.001 29.3 3.0 112 176-292 112-231 (271)
303 3kto_A Response regulator rece 31.6 1.1E+02 0.0036 22.7 6.0 42 180-228 48-90 (136)
304 2fep_A Catabolite control prot 31.4 1.5E+02 0.0052 25.1 7.7 51 175-228 88-143 (289)
305 1zbd_A Rabphilin-3A; G protein 31.3 1.9E+02 0.0064 22.9 7.8 56 204-259 97-155 (203)
306 1vlv_A Otcase, ornithine carba 31.3 3.3E+02 0.011 25.4 11.4 92 177-283 79-176 (325)
307 3pdi_B Nitrogenase MOFE cofact 31.3 41 0.0014 32.6 4.3 67 177-253 191-264 (458)
308 3sds_A Ornithine carbamoyltran 31.3 3.4E+02 0.012 25.6 11.1 94 177-285 87-199 (353)
309 3lua_A Response regulator rece 31.2 1.6E+02 0.0054 21.7 7.2 43 178-228 45-91 (140)
310 2r0b_A Serine/threonine/tyrosi 31.2 15 0.00053 29.1 1.1 32 156-187 4-38 (154)
311 1h4x_A SPOIIAA, anti-sigma F f 31.1 87 0.003 23.2 5.4 57 181-250 40-96 (117)
312 3eyt_A Uncharacterized protein 30.9 19 0.00066 27.8 1.6 109 162-280 6-123 (158)
313 3jvd_A Transcriptional regulat 30.6 62 0.0021 28.6 5.1 95 177-281 168-265 (333)
314 2g6b_A RAS-related protein RAB 30.5 1.8E+02 0.0062 22.2 8.5 56 204-259 100-158 (180)
315 1z08_A RAS-related protein RAB 30.5 1.5E+02 0.0051 22.4 6.8 56 204-259 95-153 (170)
316 3cs3_A Sugar-binding transcrip 30.5 1.8E+02 0.0063 24.3 8.0 19 263-281 192-211 (277)
317 3cz5_A Two-component response 30.4 1.7E+02 0.0059 21.9 9.5 44 176-228 45-89 (153)
318 2wfc_A Peroxiredoxin 5, PRDX5; 30.3 72 0.0025 25.8 5.1 79 161-250 8-91 (167)
319 2w37_A Ornithine carbamoyltran 30.2 3.6E+02 0.012 25.6 11.5 92 177-283 88-185 (359)
320 2efe_B Small GTP-binding prote 30.2 1.9E+02 0.0063 22.2 8.0 56 204-259 101-159 (181)
321 1th8_B Anti-sigma F factor ant 30.2 86 0.003 23.0 5.2 56 182-250 42-97 (116)
322 3ihw_A Centg3; RAS, centaurin, 30.2 1.9E+02 0.0064 23.0 7.6 75 177-258 82-163 (184)
323 3egc_A Putative ribose operon 30.2 74 0.0025 27.0 5.4 51 176-229 81-136 (291)
324 2xn2_A Alpha-galactosidase; hy 30.1 64 0.0022 33.3 5.7 49 177-227 358-418 (732)
325 2a4v_A Peroxiredoxin DOT5; yea 30.0 1.1E+02 0.0036 23.8 5.9 97 161-274 12-111 (159)
326 3ovp_A Ribulose-phosphate 3-ep 29.9 1.2E+02 0.0043 26.3 6.9 95 166-272 7-113 (228)
327 3lxw_A GTPase IMAP family memb 29.8 2.6E+02 0.0089 23.8 9.0 71 181-258 104-186 (247)
328 3j08_A COPA, copper-exporting 29.7 16 0.00054 37.0 1.1 19 181-200 324-342 (645)
329 2o20_A Catabolite control prot 29.4 92 0.0031 27.2 6.0 51 175-228 135-190 (332)
330 3o74_A Fructose transport syst 29.4 89 0.003 25.9 5.7 98 176-281 113-213 (272)
331 1ek0_A Protein (GTP-binding pr 29.4 1.8E+02 0.0062 21.8 7.6 56 204-259 92-153 (170)
332 2hup_A RAS-related protein RAB 29.3 2E+02 0.0068 23.1 7.7 56 204-259 118-177 (201)
333 3brq_A HTH-type transcriptiona 29.2 1.9E+02 0.0065 24.1 7.8 51 175-228 93-149 (296)
334 3d8u_A PURR transcriptional re 28.9 1.6E+02 0.0053 24.5 7.2 51 175-228 75-130 (275)
335 2qzj_A Two-component response 28.9 1.8E+02 0.006 21.6 8.6 44 176-228 42-85 (136)
336 3hcw_A Maltose operon transcri 28.9 1.8E+02 0.0063 24.7 7.8 97 176-281 124-226 (295)
337 2nn4_A Hypothetical protein YQ 28.6 6.5 0.00022 29.7 -1.5 21 263-287 8-28 (72)
338 2bln_A Protein YFBG; transfera 28.6 2.1E+02 0.0071 26.1 8.4 70 207-281 13-83 (305)
339 3snk_A Response regulator CHEY 28.5 76 0.0026 23.4 4.6 42 178-228 55-97 (135)
340 3llo_A Prestin; STAS domain, c 28.5 74 0.0025 24.8 4.7 57 181-250 62-118 (143)
341 3tqd_A 3-deoxy-manno-octuloson 28.4 2.6E+02 0.0088 24.5 8.8 13 175-187 41-53 (256)
342 3tw8_B RAS-related protein RAB 28.4 2E+02 0.0067 21.9 7.4 73 180-259 81-155 (181)
343 2qxy_A Response regulator; reg 28.3 1.8E+02 0.0061 21.4 8.3 43 176-228 42-85 (142)
344 2g3y_A GTP-binding protein GEM 28.3 1.5E+02 0.0051 24.9 7.0 69 184-259 115-187 (211)
345 1oth_A Protein (ornithine tran 28.2 3.6E+02 0.012 25.0 13.6 92 177-283 67-164 (321)
346 2ywr_A Phosphoribosylglycinami 28.2 1.4E+02 0.0048 25.8 6.9 65 206-281 15-88 (216)
347 3luf_A Two-component system re 28.1 1.5E+02 0.0053 25.3 7.2 84 181-285 47-135 (259)
348 4dgh_A Sulfate permease family 28.1 60 0.0021 25.0 4.1 56 181-249 47-102 (130)
349 1nm3_A Protein HI0572; hybrid, 27.9 2.1E+02 0.0072 24.0 7.9 92 185-284 128-229 (241)
350 3bil_A Probable LACI-family tr 27.8 2.9E+02 0.0099 24.3 9.1 53 175-228 138-194 (348)
351 3rot_A ABC sugar transporter, 27.8 1.5E+02 0.0052 25.2 7.0 54 175-229 79-141 (297)
352 3q3j_B RHO-related GTP-binding 27.7 1.9E+02 0.0063 23.7 7.3 55 206-260 118-187 (214)
353 3grf_A Ornithine carbamoyltran 27.6 2.6E+02 0.0087 26.1 9.0 92 178-283 66-170 (328)
354 3t5g_A GTP-binding protein RHE 27.4 2.1E+02 0.0073 22.0 9.2 56 204-259 94-153 (181)
355 3p3c_A UDP-3-O-[3-hydroxymyris 27.4 1.2E+02 0.0041 28.0 6.5 54 174-229 184-251 (274)
356 2c0d_A Thioredoxin peroxidase 27.3 56 0.0019 28.0 4.1 77 159-247 28-111 (221)
357 1tv8_A MOAA, molybdenum cofact 27.3 2.1E+02 0.0072 25.5 8.1 42 179-228 63-106 (340)
358 2oyc_A PLP phosphatase, pyrido 27.2 33 0.0011 30.1 2.6 96 193-292 148-251 (306)
359 3e61_A Putative transcriptiona 27.2 62 0.0021 27.2 4.3 101 175-281 78-211 (277)
360 3c3k_A Alanine racemase; struc 27.0 2E+02 0.0068 24.3 7.6 19 263-281 199-218 (285)
361 2cjw_A GTP-binding protein GEM 26.9 1.4E+02 0.0047 24.1 6.3 72 180-258 80-155 (192)
362 1h1y_A D-ribulose-5-phosphate 26.7 1E+02 0.0036 26.3 5.8 78 161-252 9-91 (228)
363 2h01_A 2-Cys peroxiredoxin; th 26.7 62 0.0021 26.2 4.1 74 162-247 6-86 (192)
364 1wik_A Thioredoxin-like protei 26.6 1.8E+02 0.0061 21.6 6.5 74 209-284 7-80 (109)
365 3pzy_A MOG; ssgcid, seattle st 26.6 44 0.0015 27.8 3.2 55 176-240 34-88 (164)
366 3ilh_A Two component response 26.6 1.9E+02 0.0064 21.1 9.5 75 176-270 49-136 (146)
367 1h7e_A 3-deoxy-manno-octuloson 26.5 2.2E+02 0.0077 23.6 7.8 8 176-183 35-42 (245)
368 1z0f_A RAB14, member RAS oncog 26.5 2.1E+02 0.0072 21.7 8.1 56 204-259 104-162 (179)
369 3t6k_A Response regulator rece 26.2 2E+02 0.0068 21.3 9.6 44 176-228 42-88 (136)
370 1mkz_A Molybdenum cofactor bio 26.0 1.5E+02 0.0051 24.6 6.4 57 176-240 35-91 (172)
371 4i6k_A Amidohydrolase family p 26.0 1.4E+02 0.0047 26.3 6.5 68 176-254 112-179 (294)
372 3n28_A Phosphoserine phosphata 25.9 64 0.0022 28.7 4.4 45 199-251 41-95 (335)
373 3cpj_B GTP-binding protein YPT 25.9 2.2E+02 0.0077 23.2 7.5 56 204-259 102-160 (223)
374 3a24_A Alpha-galactosidase; gl 25.7 60 0.002 33.4 4.5 73 173-252 315-391 (641)
375 3heb_A Response regulator rece 25.6 2.1E+02 0.0072 21.4 8.9 56 180-252 57-115 (152)
376 2qsj_A DNA-binding response re 25.6 1.4E+02 0.0049 22.3 5.8 44 176-228 43-88 (154)
377 1m3s_A Hypothetical protein YC 25.5 1.4E+02 0.0049 23.9 6.1 25 203-228 92-116 (186)
378 3sho_A Transcriptional regulat 25.5 1.6E+02 0.0054 23.7 6.4 26 203-229 100-125 (187)
379 2lqo_A Putative glutaredoxin R 25.4 2.1E+02 0.0072 21.3 8.0 59 220-283 5-64 (92)
380 3d6n_B Aspartate carbamoyltran 25.2 1.9E+02 0.0063 26.6 7.4 92 177-282 55-154 (291)
381 2f7s_A C25KG, RAS-related prot 25.1 1.2E+02 0.004 24.6 5.5 55 205-259 125-183 (217)
382 1wms_A RAB-9, RAB9, RAS-relate 24.9 2.3E+02 0.0079 21.6 8.4 70 183-259 82-158 (177)
383 1n8j_A AHPC, alkyl hydroperoxi 24.8 84 0.0029 25.6 4.6 93 161-273 6-110 (186)
384 3dbi_A Sugar-binding transcrip 24.7 2.2E+02 0.0074 24.8 7.6 52 177-229 138-192 (338)
385 4dgf_A Sulfate transporter sul 24.7 74 0.0025 24.8 4.1 56 181-249 50-105 (135)
386 2a9o_A Response regulator; ess 24.7 1.8E+02 0.0063 20.3 9.4 44 176-228 39-82 (120)
387 2bov_A RAla, RAS-related prote 24.6 2.5E+02 0.0087 22.0 8.5 74 179-259 84-161 (206)
388 1ass_A Thermosome; chaperonin, 24.6 2.7E+02 0.0092 22.9 7.7 53 208-272 63-115 (159)
389 2oil_A CATX-8, RAS-related pro 24.4 2.6E+02 0.0087 21.9 7.5 56 204-259 114-172 (193)
390 3t6o_A Sulfate transporter/ant 24.3 36 0.0012 26.0 2.0 57 181-250 46-103 (121)
391 3gxh_A Putative phosphatase (D 24.2 82 0.0028 25.4 4.3 36 156-191 13-49 (157)
392 2o20_A Catabolite control prot 24.2 1.5E+02 0.0051 25.8 6.4 43 238-281 230-273 (332)
393 3g85_A Transcriptional regulat 24.1 3.1E+02 0.011 22.9 8.2 22 262-283 202-224 (289)
394 1z2a_A RAS-related protein RAB 24.0 2.3E+02 0.0078 21.2 7.3 77 176-259 73-151 (168)
395 3gl9_A Response regulator; bet 23.9 2.1E+02 0.0071 20.7 9.7 60 176-252 40-102 (122)
396 3jte_A Response regulator rece 23.8 2.2E+02 0.0074 20.9 9.4 40 180-228 47-87 (143)
397 3hv2_A Response regulator/HD d 23.7 2.3E+02 0.008 21.2 9.7 44 176-228 52-96 (153)
398 2xdq_A Light-independent proto 23.6 3.1E+02 0.01 25.9 8.9 67 207-275 210-295 (460)
399 3lpp_A Sucrase-isomaltase; gly 23.5 99 0.0034 32.9 5.8 81 143-227 297-395 (898)
400 1t1v_A SH3BGRL3, SH3 domain-bi 23.5 2.1E+02 0.0071 20.5 7.8 47 238-284 22-70 (93)
401 3hcz_A Possible thiol-disulfid 23.4 1.3E+02 0.0043 22.3 5.1 105 159-280 8-117 (148)
402 1zye_A Thioredoxin-dependent p 23.4 92 0.0032 26.3 4.7 76 159-247 30-111 (220)
403 1z06_A RAS-related protein RAB 23.3 2.7E+02 0.0092 21.8 8.4 82 181-269 94-181 (189)
404 3nhm_A Response regulator; pro 23.3 2.1E+02 0.0073 20.6 7.3 44 176-228 41-87 (133)
405 3oam_A 3-deoxy-manno-octuloson 23.3 3.5E+02 0.012 23.1 8.8 13 240-252 54-66 (252)
406 2fn4_A P23, RAS-related protei 23.2 2.5E+02 0.0084 21.3 7.9 77 176-259 76-156 (181)
407 3c3k_A Alanine racemase; struc 23.2 1.9E+02 0.0065 24.4 6.7 50 175-228 80-134 (285)
408 3p9x_A Phosphoribosylglycinami 23.0 1.1E+02 0.0036 26.9 5.1 51 221-281 33-89 (211)
409 3kcq_A Phosphoribosylglycinami 22.9 1.2E+02 0.004 26.6 5.3 51 221-281 39-90 (215)
410 3eod_A Protein HNR; response r 22.8 2.2E+02 0.0074 20.5 8.3 43 177-228 46-89 (130)
411 3fw2_A Thiol-disulfide oxidore 22.6 1.5E+02 0.0053 22.4 5.5 107 159-279 8-121 (150)
412 1vim_A Hypothetical protein AF 22.6 1.8E+02 0.0063 24.0 6.4 26 203-229 102-127 (200)
413 2yx0_A Radical SAM enzyme; pre 22.5 2.7E+02 0.0091 24.9 7.9 41 181-228 140-180 (342)
414 3k9c_A Transcriptional regulat 22.5 3.5E+02 0.012 22.8 9.1 49 176-228 83-136 (289)
415 2bcg_Y Protein YP2, GTP-bindin 22.4 2.9E+02 0.01 21.9 8.9 56 204-259 97-155 (206)
416 3k8d_A 3-deoxy-manno-octuloson 22.4 3.9E+02 0.013 23.4 8.8 12 176-187 51-62 (264)
417 2hx1_A Predicted sugar phospha 22.4 37 0.0013 29.2 1.9 85 204-292 148-244 (284)
418 3fkf_A Thiol-disulfide oxidore 22.3 1.7E+02 0.006 21.5 5.7 109 158-280 7-120 (148)
419 1lvw_A Glucose-1-phosphate thy 22.3 2.2E+02 0.0076 25.3 7.3 18 209-227 40-58 (295)
420 3inp_A D-ribulose-phosphate 3- 22.1 1.8E+02 0.0062 25.9 6.6 95 166-272 30-135 (246)
421 2o52_A RAS-related protein RAB 22.1 3E+02 0.01 21.9 8.0 77 176-259 93-172 (200)
422 3l4b_C TRKA K+ channel protien 21.9 3.3E+02 0.011 22.3 8.1 56 210-280 16-71 (218)
423 1pg5_A Aspartate carbamoyltran 21.7 4.7E+02 0.016 23.9 10.0 95 177-285 59-160 (299)
424 1meo_A Phosophoribosylglycinam 21.6 1.8E+02 0.0062 25.1 6.3 54 218-281 27-87 (209)
425 1xhf_A DYE resistance, aerobic 21.6 2.2E+02 0.0076 20.1 9.6 44 176-228 41-84 (123)
426 2zej_A Dardarin, leucine-rich 21.6 1.5E+02 0.0051 23.4 5.4 45 178-228 77-122 (184)
427 3p3g_A UDP-3-O-[3-hydroxymyris 21.4 1.8E+02 0.0062 27.2 6.5 54 174-229 197-264 (300)
428 3rqi_A Response regulator prot 21.3 2.6E+02 0.009 22.0 6.9 44 176-228 45-89 (184)
429 3uhm_A UDP-3-O-[3-hydroxymyris 21.3 1.8E+02 0.0063 27.1 6.6 54 174-229 196-263 (299)
430 1k68_A Phytochrome response re 21.3 2.3E+02 0.0079 20.3 8.8 39 181-228 54-95 (140)
431 3l4y_A Maltase-glucoamylase, i 21.3 1.1E+02 0.0039 32.3 5.8 80 143-226 269-366 (875)
432 3gyb_A Transcriptional regulat 21.3 1.7E+02 0.0059 24.4 6.0 46 181-228 78-128 (280)
433 1byk_A Protein (trehalose oper 21.2 1.3E+02 0.0046 24.7 5.2 47 176-227 73-124 (255)
434 1z7e_A Protein aRNA; rossmann 21.2 2.9E+02 0.0098 27.2 8.4 70 207-281 13-83 (660)
435 1y5e_A Molybdenum cofactor bio 21.2 1.8E+02 0.0061 23.9 5.9 58 176-241 38-95 (169)
436 3ksm_A ABC-type sugar transpor 21.2 2.3E+02 0.0079 23.3 6.7 42 239-281 177-219 (276)
437 4ba0_A Alpha-glucosidase, puta 21.1 1.2E+02 0.0041 31.8 5.8 80 143-226 241-343 (817)
438 1m7b_A RND3/RHOE small GTP-bin 21.0 3E+02 0.01 21.4 7.6 59 208-266 100-173 (184)
439 2q5c_A NTRC family transcripti 21.0 1.3E+02 0.0044 25.5 5.2 70 205-286 82-153 (196)
440 4gxt_A A conserved functionall 21.0 27 0.00092 33.1 0.8 12 184-195 41-52 (385)
441 2v5h_A Acetylglutamate kinase; 20.9 1.3E+02 0.0045 27.5 5.5 63 176-250 42-104 (321)
442 3e61_A Putative transcriptiona 20.9 3.2E+02 0.011 22.6 7.6 14 143-156 106-119 (277)
443 2wci_A Glutaredoxin-4; redox-a 20.9 3.2E+02 0.011 21.7 8.8 79 203-284 21-100 (135)
444 2oqr_A Sensory transduction pr 20.9 3.3E+02 0.011 21.9 8.3 44 176-228 42-85 (230)
445 4pga_A Glutaminase-asparaginas 20.7 1.5E+02 0.005 27.8 5.8 50 171-227 231-283 (337)
446 2hsg_A Glucose-resistance amyl 20.7 2.2E+02 0.0074 24.7 6.7 50 176-228 133-187 (332)
447 3eul_A Possible nitrate/nitrit 20.7 2.7E+02 0.0091 20.7 9.3 44 176-228 55-99 (152)
448 2gwr_A DNA-binding response re 20.6 2.3E+02 0.0078 23.3 6.6 44 176-228 43-86 (238)
449 3geb_A EYES absent homolog 2; 20.5 3.3E+02 0.011 25.2 7.9 73 212-291 170-247 (274)
450 3n53_A Response regulator rece 20.5 1.1E+02 0.0036 22.7 4.1 44 176-228 40-86 (140)
451 2ew1_A RAS-related protein RAB 20.3 3.5E+02 0.012 21.9 7.9 55 205-259 116-173 (201)
452 2fvy_A D-galactose-binding per 20.3 3.1E+02 0.01 23.0 7.5 16 176-191 78-93 (309)
453 1dbq_A Purine repressor; trans 20.2 3.3E+02 0.011 22.6 7.6 50 176-228 80-136 (289)
454 3b2n_A Uncharacterized protein 20.1 2.6E+02 0.0089 20.4 9.3 44 176-228 43-87 (133)
455 3r0j_A Possible two component 20.1 3.7E+02 0.013 22.2 9.3 44 176-228 61-105 (250)
456 3f6c_A Positive transcription 20.0 2.5E+02 0.0086 20.2 8.1 44 176-228 40-84 (134)
No 1
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=99.70 E-value=1.4e-17 Score=138.60 Aligned_cols=110 Identities=14% Similarity=0.174 Sum_probs=86.5
Q ss_pred CcEEEEeccCeeecCC--------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccH-------HHHHHHHHHc
Q 022336 183 FKGVVFDKDNTLTAPY--------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA-------SKARKLEGKI 247 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~--------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~-------e~a~~~lk~L 247 (299)
+|+|+||+||||+... ...+.|++.++|++|++. |++++|+||+++........ +.+..+++.+
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQA-DWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQM 79 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHC-CCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhC
Confidence 6899999999999442 345889999999999997 99999999998432111111 4567777888
Q ss_pred C--CcEEEc---------cCCCCHHH-HHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 248 G--IKVIRH---------RVKKPAGT-AEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 248 G--I~vI~h---------a~KKP~p~-le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
| +..++. ...||.+. ++.+++++|++|++++||||+..||.+|+.+
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~a 137 (179)
T 3l8h_A 80 GGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQA 137 (179)
T ss_dssp TCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHH
T ss_pred CCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 8 665431 34788874 8999999999999999999999999888754
No 2
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.68 E-value=4.7e-17 Score=143.97 Aligned_cols=129 Identities=11% Similarity=0.041 Sum_probs=97.5
Q ss_pred HhcCCCCcCCccccCCcCCCCHHHHHH--cCCcEEEEeccCeeecCCCcccCc--------hH--HHHHHHHHHhCCCcE
Q 022336 154 FAKDRHLALPHVTVPDIRYIDWAELQR--RGFKGVVFDKDNTLTAPYSLTLWG--------PL--SSSIEQCKSVFGHDI 221 (299)
Q Consensus 154 ~~~~p~ll~P~~~v~sI~~Id~~~Lk~--~GIRaLVlD~DNTLT~p~~~~l~P--------gv--~e~L~~Lke~fGikV 221 (299)
|...+.-+.|+.++.+++++..+.+++ +++|+|+||+||||+ +....+.. ++ ...|+.|++. |+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ik~viFDlDGTL~-Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~-G~~l 95 (211)
T 3ij5_A 18 LYFQSNAMSNTAYIDTCYGPVADDVIQRAANIRLLICDVDGVMS-DGLIYMGNQGEELKAFNVRDGYGIRCLITS-DIDV 95 (211)
T ss_dssp ---------CCCEECCTTSCEEHHHHHHHTTCSEEEECCTTTTS-SSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEE
T ss_pred eeeehhhhhCCCCcccccCcccHHHHHHHhCCCEEEEeCCCCEE-CCHHHHhhhhHHHHHhccchHHHHHHHHHC-CCEE
Confidence 344466689999999999998877765 799999999999998 32211100 11 1268899997 9999
Q ss_pred EEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 222 AVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 222 aIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
+|+||+. ...++.+++.+|+..++... ||.+ .++.+++++|+++++|+||||+.+|+.+++.+
T Consensus 96 ~I~T~~~--------~~~~~~~l~~lgi~~~f~~~-k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~a 159 (211)
T 3ij5_A 96 AIITGRR--------AKLLEDRANTLGITHLYQGQ-SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQV 159 (211)
T ss_dssp EEECSSC--------CHHHHHHHHHHTCCEEECSC-SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTS
T ss_pred EEEeCCC--------HHHHHHHHHHcCCchhhccc-CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHC
Confidence 9999997 67899999999998777665 6666 48899999999999999999999997776543
No 3
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=8.9e-18 Score=132.21 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=81.8
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC----cEEEc---
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVIRH--- 254 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI----~vI~h--- 254 (299)
|+|+|+||+||||+ ....+.|++.++|++|++. |++++|+||+. ...++.+.+.+|+ ..+..
T Consensus 1 ~~k~i~~D~DgtL~--~~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~i~~~~~ 69 (137)
T 2pr7_A 1 GMRGLIVDYAGVLD--GTDEDQRRWRNLLAAAKKN-GVGTVILSNDP--------GGLGAAPIRELETNGVVDKVLLSGE 69 (137)
T ss_dssp CCCEEEECSTTTTS--SCHHHHHHHHHHHHHHHHT-TCEEEEEECSC--------CGGGGHHHHHHHHTTSSSEEEEHHH
T ss_pred CCcEEEEeccceec--CCCccCccHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHHCChHhhccEEEEecc
Confidence 68999999999995 6677899999999999997 99999999987 2334445555554 22322
Q ss_pred -cCCCCHHH-HHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 255 -RVKKPAGT-AEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 255 -a~KKP~p~-le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
...||.+. ++.+++.+|++|++++||||+..||.+|+.+
T Consensus 70 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~ 110 (137)
T 2pr7_A 70 LGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEA 110 (137)
T ss_dssp HSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHC
Confidence 35788875 8899999999999999999999999888753
No 4
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=99.65 E-value=2.6e-16 Score=133.82 Aligned_cols=106 Identities=21% Similarity=0.275 Sum_probs=85.4
Q ss_pred cCCcEEEEeccCeeec-------------CCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHc
Q 022336 181 RGFKGVVFDKDNTLTA-------------PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI 247 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~-------------p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~L 247 (299)
++||+|+||+||||+. +....+.|++.++|++|++. |++++|+||+... ....+..+++.+
T Consensus 1 m~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~-----~~~~~~~~l~~~ 74 (189)
T 3ib6_A 1 MSLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTATS-----DTEVIKRVLTNF 74 (189)
T ss_dssp --CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSSC-----CHHHHHHHHHHT
T ss_pred CCceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCcc-----chHHHHHHHHhc
Confidence 4799999999999964 22356889999999999997 9999999999721 136788899999
Q ss_pred CCc----EEEc--------cCCCCHHH-HHHHHHHhCCCCCcEEEEcCC-cccccccce
Q 022336 248 GIK----VIRH--------RVKKPAGT-AEEIEKHFGCQSSQLIMVDMC-RIVIFPGPV 292 (299)
Q Consensus 248 GI~----vI~h--------a~KKP~p~-le~alk~lGi~PeEiamVGDr-l~DI~gAn~ 292 (299)
|+. .+.. ...||.+. ++.+++++|++|++++||||+ ..||.+|+.
T Consensus 75 gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~ 133 (189)
T 3ib6_A 75 GIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANR 133 (189)
T ss_dssp TCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHH
T ss_pred CchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHH
Confidence 974 2221 34588874 899999999999999999999 599988875
No 5
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=99.65 E-value=1.2e-16 Score=155.07 Aligned_cols=108 Identities=18% Similarity=0.113 Sum_probs=88.9
Q ss_pred HHHHHcCCcEEEEeccCeeec-----CCC-----------cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHH
Q 022336 176 AELQRRGFKGVVFDKDNTLTA-----PYS-----------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK 239 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~-----p~~-----------~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~ 239 (299)
..|+.++||+||||+|||||. ++. ..++|++.++|+.|+++ |++++|+||+. .+.
T Consensus 215 ~~l~~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~-Gi~laI~Snn~--------~~~ 285 (387)
T 3nvb_A 215 AAIQGKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNR-GIIIAVCSKNN--------EGK 285 (387)
T ss_dssp HHHTTCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHT-TCEEEEEEESC--------HHH
T ss_pred HHHHhCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHC-CCEEEEEcCCC--------HHH
Confidence 567889999999999999994 111 13568899999999997 99999999998 788
Q ss_pred HHHHHHH-----c---CCcEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 240 ARKLEGK-----I---GIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 240 a~~~lk~-----L---GI~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
++.++++ + ++..+.. ..||.+ .+.++++++|++|++++||||+.+|+.+|+..
T Consensus 286 v~~~l~~~~~~~l~l~~~~~v~~-~~KPKp~~l~~al~~Lgl~pee~v~VGDs~~Di~aaraa 347 (387)
T 3nvb_A 286 AKEPFERNPEMVLKLDDIAVFVA-NWENKADNIRTIQRTLNIGFDSMVFLDDNPFERNMVREH 347 (387)
T ss_dssp HHHHHHHCTTCSSCGGGCSEEEE-ESSCHHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHH
T ss_pred HHHHHhhccccccCccCccEEEe-CCCCcHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHhc
Confidence 9998887 3 3434433 468887 49999999999999999999999998887654
No 6
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=99.62 E-value=5.5e-16 Score=134.46 Aligned_cols=112 Identities=12% Similarity=0.138 Sum_probs=84.5
Q ss_pred cCCcEEEEeccCeeecCC-------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCC--CCc-----cHHHHHHHHHH
Q 022336 181 RGFKGVVFDKDNTLTAPY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEGK 246 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~-------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~--~d~-----~~e~a~~~lk~ 246 (299)
..+|+++||+||||+... ...+.|++.++|++|++. |++++|+||+.+... +.. ....+..+++.
T Consensus 23 ~~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 101 (211)
T 2gmw_A 23 KSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD 101 (211)
T ss_dssp -CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHC-CCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH
Confidence 468999999999999332 146889999999999997 999999999972000 000 01456777788
Q ss_pred cCCc--EEE----------------ccCCCCHHH-HHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 247 IGIK--VIR----------------HRVKKPAGT-AEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 247 LGI~--vI~----------------ha~KKP~p~-le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
+|+. .+. ....||.+. ++.+++.+|++|++++||||+..||.+|+.+
T Consensus 102 ~gl~f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~a 167 (211)
T 2gmw_A 102 RDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAA 167 (211)
T ss_dssp TTCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHT
T ss_pred cCCceEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 8874 221 124688874 8899999999999999999999999887653
No 7
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=99.61 E-value=3.9e-16 Score=135.20 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=95.5
Q ss_pred cCCccccCCcCCCCHHHHHHcCCcEEEEeccCeeecCC-------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCC
Q 022336 161 ALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY 233 (299)
Q Consensus 161 l~P~~~v~sI~~Id~~~Lk~~GIRaLVlD~DNTLT~p~-------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~ 233 (299)
..|...+..+....+. ..+|+++||+||||+... ...+.|++.++|++|++. |++++|+||+......
T Consensus 13 ~~p~~~~~~~~~~~~~----~~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~-G~~~~i~Tn~~~~~~~ 87 (218)
T 2o2x_A 13 TEPGVWIERIGGRVFP----PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQSGIARG 87 (218)
T ss_dssp EETTEEEEECSCCCCC----SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECHHHHTT
T ss_pred CCCceeeecccccchh----hcCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHC-CCEEEEEcCcCCCCcc
Confidence 3566666666666542 469999999999999321 367899999999999998 9999999999710000
Q ss_pred CccH-------HHHHHHHHHcCCc--EEE-c---------------cCCCCHHH-HHHHHHHhCCCCCcEEEEcCCcccc
Q 022336 234 DNDA-------SKARKLEGKIGIK--VIR-H---------------RVKKPAGT-AEEIEKHFGCQSSQLIMVDMCRIVI 287 (299)
Q Consensus 234 d~~~-------e~a~~~lk~LGI~--vI~-h---------------a~KKP~p~-le~alk~lGi~PeEiamVGDrl~DI 287 (299)
.... ..+..+++.+|+. .++ . ...||.+. ++.+++++|++|++++||||+..||
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di 167 (218)
T 2o2x_A 88 YFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADM 167 (218)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHH
Confidence 0000 5677788888863 221 1 34688864 8899999999999999999999999
Q ss_pred ccccee
Q 022336 288 FPGPVV 293 (299)
Q Consensus 288 ~gAn~~ 293 (299)
.+|+.+
T Consensus 168 ~~a~~a 173 (218)
T 2o2x_A 168 QAGKRA 173 (218)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 888753
No 8
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.61 E-value=4.7e-16 Score=128.27 Aligned_cols=102 Identities=16% Similarity=0.083 Sum_probs=81.6
Q ss_pred cCCcEEEEeccCeeecCCCccc---Cch-------HHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTL---WGP-------LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l---~Pg-------v~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
.+||+|+||+||||+. +...+ .+. -...++.|++. |++++|+||+. ...++.+++.+|+.
T Consensus 2 ~~ik~vifD~DGTL~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~--------~~~~~~~~~~~gl~ 71 (164)
T 3e8m_A 2 KEIKLILTDIDGVWTD-GGMFYDQTGNEWKKFNTSDSAGIFWAHNK-GIPVGILTGEK--------TEIVRRRAEKLKVD 71 (164)
T ss_dssp CCCCEEEECSTTTTSS-SEEEECSSSCEEEEEEGGGHHHHHHHHHT-TCCEEEECSSC--------CHHHHHHHHHTTCS
T ss_pred CcceEEEEcCCCceEc-CcEEEcCCCcEEEEecCChHHHHHHHHHC-CCEEEEEeCCC--------hHHHHHHHHHcCCC
Confidence 4689999999999993 22111 111 12248899987 99999999997 67899999999998
Q ss_pred EEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 251 vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
.++... ||.+ .++.+++++|++|++++||||+.+|+.+|+.+
T Consensus 72 ~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 114 (164)
T 3e8m_A 72 YLFQGV-VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRV 114 (164)
T ss_dssp EEECSC-SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTS
T ss_pred Eeeccc-CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 766553 7877 48999999999999999999999998877654
No 9
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.60 E-value=5e-16 Score=135.67 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=83.1
Q ss_pred HcCCcEEEEeccCeeecCCCccc---CchHHHH-------HHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTL---WGPLSSS-------IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l---~Pgv~e~-------L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
..++|+|+||+||||+ +..... .+++.++ |+.|++. |++++|+||+. ...++.+++.+|+
T Consensus 22 ~~~ik~vifD~DGtL~-d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-G~~~~ivT~~~--------~~~~~~~l~~lgi 91 (195)
T 3n07_A 22 AKQIKLLICDVDGVFS-DGLIYMGNQGEELKTFHTRDGYGVKALMNA-GIEIAIITGRR--------SQIVENRMKALGI 91 (195)
T ss_dssp HHTCCEEEECSTTTTS-CSCCEECTTSCEECCCCTTHHHHHHHHHHT-TCEEEEECSSC--------CHHHHHHHHHTTC
T ss_pred HhCCCEEEEcCCCCcC-CCcEEEccCchhhheeecccHHHHHHHHHC-CCEEEEEECcC--------HHHHHHHHHHcCC
Confidence 4799999999999999 322111 1233334 9999997 99999999997 6889999999999
Q ss_pred cEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 250 ~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
..++... ||.+ .++.+++++|+++++++||||+.+|+.+++.
T Consensus 92 ~~~~~~~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ 134 (195)
T 3n07_A 92 SLIYQGQ-DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEK 134 (195)
T ss_dssp CEEECSC-SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTT
T ss_pred cEEeeCC-CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH
Confidence 8777654 7776 4899999999999999999999999776654
No 10
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.60 E-value=1.1e-15 Score=125.86 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=83.3
Q ss_pred HcCCcEEEEeccCeeecCCCc----------ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSL----------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~----------~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
...+|+|+||+||||+. ... .+.|+..+.|++|++. |++++|+||+. ...++.+++.+|+
T Consensus 6 ~~~~k~v~~DlDGTL~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~--------~~~~~~~l~~~gl 75 (162)
T 2p9j_A 6 VKKLKLLIMDIDGVLTD-GKLYYTEHGETIKVFNVLDGIGIKLLQKM-GITLAVISGRD--------SAPLITRLKELGV 75 (162)
T ss_dssp HHHCCEEEECCTTTTSC-SEEEEETTEEEEEEEEHHHHHHHHHHHTT-TCEEEEEESCC--------CHHHHHHHHHTTC
T ss_pred ccceeEEEEecCcceEC-CceeecCCCceeeeecccHHHHHHHHHHC-CCEEEEEeCCC--------cHHHHHHHHHcCC
Confidence 34699999999999993 221 1346678999999997 99999999997 6788889999999
Q ss_pred cEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 250 ~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
..++.. .||.+ .++.+++.+|++|++++||||+..|+.+|+.+
T Consensus 76 ~~~~~~-~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~a 119 (162)
T 2p9j_A 76 EEIYTG-SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKV 119 (162)
T ss_dssp CEEEEC-C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HhhccC-CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 766554 46666 48899999999999999999999998877643
No 11
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=99.60 E-value=9.3e-16 Score=133.03 Aligned_cols=102 Identities=9% Similarity=0.010 Sum_probs=78.8
Q ss_pred cCCcEEEEeccCeeecCC------------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcC
Q 022336 181 RGFKGVVFDKDNTLTAPY------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~------------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LG 248 (299)
.++|+|+||+||||+..+ ...+.|++.+.|+.|++. |++++|+||+. ...+..+.. ..
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~--------~~~~~~~~~-~~ 73 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELP--------EALSTPLAA-PV 73 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSC--------HHHHHHHHT-TT
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCCh--------HHHHHHhcC-cc
Confidence 579999999999998422 125789999999999998 99999999987 455544444 22
Q ss_pred CcEE--Ec--cCCCCHHH-HHHHHHHhCCCC-CcEEEEcCCcccccccce
Q 022336 249 IKVI--RH--RVKKPAGT-AEEIEKHFGCQS-SQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 249 I~vI--~h--a~KKP~p~-le~alk~lGi~P-eEiamVGDrl~DI~gAn~ 292 (299)
...+ .. ...||.|. +..+++++|+.+ ++|+||||+..||.+|+.
T Consensus 74 ~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~ 123 (196)
T 2oda_A 74 NDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLN 123 (196)
T ss_dssp TTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHH
T ss_pred CCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHH
Confidence 2222 11 35788875 889999999976 899999999999998875
No 12
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=99.60 E-value=1.1e-15 Score=129.54 Aligned_cols=103 Identities=21% Similarity=0.102 Sum_probs=82.7
Q ss_pred CCcEEEEeccCeeecC-----------------------CCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHH
Q 022336 182 GFKGVVFDKDNTLTAP-----------------------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS 238 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p-----------------------~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e 238 (299)
.+|+|+||+||||+.. ....+.|++.++|++|++. |++++|+||+.. ..
T Consensus 26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~~-------~~ 97 (187)
T 2wm8_A 26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTSE-------IE 97 (187)
T ss_dssp SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCSC-------HH
T ss_pred ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCCC-------hH
Confidence 5899999999999832 2346789999999999998 999999999861 36
Q ss_pred HHHHHHHHcCCcEEEc---cCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 239 KARKLEGKIGIKVIRH---RVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 239 ~a~~~lk~LGI~vI~h---a~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
.++.+++.+|+..++. ...+|.+ .++.+++.+|++|++|+||||+..||.+|+.
T Consensus 98 ~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~ 155 (187)
T 2wm8_A 98 GANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSK 155 (187)
T ss_dssp HHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHT
T ss_pred HHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHH
Confidence 7888888999852111 1235555 4889999999999999999999999887764
No 13
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.59 E-value=1.1e-15 Score=131.84 Aligned_cols=102 Identities=13% Similarity=0.121 Sum_probs=83.3
Q ss_pred HcCCcEEEEeccCeeecCCCccc---CchHHHH-------HHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTL---WGPLSSS-------IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l---~Pgv~e~-------L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
..+||+|+||+||||+ ++...+ .+++.++ |+.|++. |++++|+||+. ...++.+++.+|+
T Consensus 16 ~~~ik~vifD~DGtL~-~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~~~ivTn~~--------~~~~~~~l~~lgl 85 (191)
T 3n1u_A 16 AKKIKCLICDVDGVLS-DGLLHIDNHGNELKSFHVQDGMGLKLLMAA-GIQVAIITTAQ--------NAVVDHRMEQLGI 85 (191)
T ss_dssp HHTCSEEEECSTTTTB-CSCCEECTTCCEECCBCHHHHHHHHHHHHT-TCEEEEECSCC--------SHHHHHHHHHHTC
T ss_pred HhcCCEEEEeCCCCCC-CCceeecCCchhhhhccccChHHHHHHHHC-CCeEEEEeCcC--------hHHHHHHHHHcCC
Confidence 3699999999999999 332222 1344445 9999997 99999999997 6889999999999
Q ss_pred cEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 250 ~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
..++... ||.+ .+..+++.+|+++++++||||+.+|+.+|+.
T Consensus 86 ~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ 128 (191)
T 3n1u_A 86 THYYKGQ-VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQ 128 (191)
T ss_dssp CEEECSC-SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred ccceeCC-CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 8777664 5655 5889999999999999999999999877654
No 14
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.59 E-value=2e-15 Score=129.02 Aligned_cols=103 Identities=10% Similarity=0.043 Sum_probs=81.9
Q ss_pred HHcCCcEEEEeccCeeecCCCcccC----------chHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcC
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLW----------GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~----------Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LG 248 (299)
+..++|+|+||+||||+. +...+. ..-...|++|++. |++++|+||+. ...++.+++.+|
T Consensus 22 ~~~~ik~vifD~DGTL~~-~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~v~ivT~~~--------~~~~~~~l~~lg 91 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSD-GLIYMGNNGEELKAFNVRDGYGIRCALTS-DIEVAIITGRK--------AKLVEDRCATLG 91 (188)
T ss_dssp HHHTCSEEEECCCCCCBC-SEEEEETTSCEEEEEEHHHHHHHHHHHTT-TCEEEEECSSC--------CHHHHHHHHHHT
T ss_pred HHhcCCEEEEeCCCCcCC-CCEEecCCCcEEEEeecccHHHHHHHHHC-CCeEEEEeCCC--------hHHHHHHHHHcC
Confidence 457999999999999993 222111 1112468899887 99999999997 678888999999
Q ss_pred CcEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 249 IKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 249 I~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
+..++.. .||.+ .++.+++++|++|++++||||+.+|+.+|+.
T Consensus 92 l~~~~~~-~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ 135 (188)
T 2r8e_A 92 ITHLYQG-QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEK 135 (188)
T ss_dssp CCEEECS-CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTT
T ss_pred CceeecC-CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 9876654 36665 4889999999999999999999999887764
No 15
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=99.59 E-value=7e-16 Score=130.43 Aligned_cols=82 Identities=9% Similarity=0.093 Sum_probs=67.5
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EEc----cCCCCHHH-HHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRH----RVKKPAGT-AEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~h----a~KKP~p~-le~alk~lGi~ 273 (299)
.|++.+.++.|++. |++++|+||+. ...+....+.+|+.. +.. +..||.|. ++.+++++|++
T Consensus 86 ~pg~~~~l~~L~~~-g~~~~i~tn~~--------~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~ 156 (216)
T 3kbb_A 86 NPGVREALEFVKSK-RIKLALATSTP--------QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVV 156 (216)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCC
T ss_pred CccHHHHHHHHHHc-CCCcccccCCc--------HHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCC
Confidence 46667777788887 99999999997 778888888888742 221 45789874 89999999999
Q ss_pred CCcEEEEcCCccccccccee
Q 022336 274 SSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~~ 293 (299)
|+||+||||+..||.||+.+
T Consensus 157 p~e~l~VgDs~~Di~aA~~a 176 (216)
T 3kbb_A 157 PEKVVVFEDSKSGVEAAKSA 176 (216)
T ss_dssp GGGEEEEECSHHHHHHHHHT
T ss_pred ccceEEEecCHHHHHHHHHc
Confidence 99999999999999988753
No 16
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=99.58 E-value=4.4e-16 Score=132.29 Aligned_cols=113 Identities=13% Similarity=0.123 Sum_probs=82.9
Q ss_pred HHcCCcEEEEeccCeeecCC----------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCC-------ccHHHHH
Q 022336 179 QRRGFKGVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-------NDASKAR 241 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~----------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d-------~~~e~a~ 241 (299)
...++|+++||+||||+... ...+.|++.+.|++|++. |++++|+||+.|..... .....+.
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~ 88 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQDGLGTQSFPQADFDGPHNLMM 88 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEECTTTTBTTBCHHHHHHHHHHHH
T ss_pred cCCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECCccccccccchHhhhhhHHHHH
Confidence 35789999999999998441 345789999999999997 99999999995432110 0145677
Q ss_pred HHHHHcCCc--EEE-------c--cCCCCHHH-HHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 242 KLEGKIGIK--VIR-------H--RVKKPAGT-AEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 242 ~~lk~LGI~--vI~-------h--a~KKP~p~-le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
.+++.+|+. .+. . ...||.+. ++.+++++|++|++++||||+..||.+|+.
T Consensus 89 ~~l~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~ 151 (176)
T 2fpr_A 89 QIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN 151 (176)
T ss_dssp HHHHHTTCCEEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHH
T ss_pred HHHHHcCCCeeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence 788888875 221 1 24788874 888999999999999999999999988864
No 17
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.56 E-value=3.2e-15 Score=126.62 Aligned_cols=101 Identities=19% Similarity=0.142 Sum_probs=84.1
Q ss_pred cCCcEEEEeccCeeecCCCc----------ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSL----------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~----------~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
..||+|+||+||||+. ... .+.++..+.|++|++. |++++|+||+. ...++.+++.+|+.
T Consensus 6 ~~ik~i~~DlDGTL~~-~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~--------~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTD-GQLHYDANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRD--------SPILRRRIADLGIK 75 (180)
T ss_dssp GGCCEEEEECTTTTSC-SEEEEETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCC--------CHHHHHHHHHHTCC
T ss_pred hCCeEEEEeCCCCcCC-CCeeeccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCC--------cHHHHHHHHHcCCc
Confidence 4689999999999993 321 2455778999999997 99999999997 67888899999997
Q ss_pred EEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 251 vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
.++.. .||.+ .++++++++|++|++++||||+.+|+.+++.
T Consensus 76 ~~~~~-~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ 117 (180)
T 1k1e_A 76 LFFLG-KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA 117 (180)
T ss_dssp EEEES-CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred eeecC-CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 66544 47776 4889999999999999999999999877654
No 18
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.56 E-value=3.2e-15 Score=128.27 Aligned_cols=102 Identities=15% Similarity=0.069 Sum_probs=80.7
Q ss_pred HcCCcEEEEeccCeeecCCCcccCch----------HHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGP----------LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pg----------v~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
.+++|+|+||+||||+ +....+.+. -...|++|++. |++++|+||+. ...++.+++.+|+
T Consensus 16 ~~~ik~vifD~DGTL~-d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~--------~~~~~~~~~~lgl 85 (189)
T 3mn1_A 16 GKAIKLAVFDVDGVLT-DGRLYFMEDGSEIKTFNTLDGQGIKMLIAS-GVTTAIISGRK--------TAIVERRAKSLGI 85 (189)
T ss_dssp HHTCCEEEECSTTTTS-CSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSC--------CHHHHHHHHHHTC
T ss_pred HHhCCEEEEcCCCCcC-CccEeeccCCcEeeeeccccHHHHHHHHHC-CCEEEEEECcC--------hHHHHHHHHHcCC
Confidence 3589999999999999 332221111 11378899997 99999999997 6789999999999
Q ss_pred cEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 250 ~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
..++... ++.+ .++.+++++|+++++++||||+.+|+.+|+.
T Consensus 86 ~~~f~~~-~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ 128 (189)
T 3mn1_A 86 EHLFQGR-EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRR 128 (189)
T ss_dssp SEEECSC-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHhcCc-CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHH
Confidence 8766554 3434 5889999999999999999999999877654
No 19
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.55 E-value=2.3e-15 Score=127.82 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=79.5
Q ss_pred cCCcEEEEeccCeeecCCCcccC---chHH-------HHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLW---GPLS-------SSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~---Pgv~-------e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
+++|+|+||+||||+. ....+. .... ..|++|++. |++++|+||+. ...++.+++.+|+.
T Consensus 10 ~~~k~vifD~DGTL~d-~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~--------~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 10 EDIDAVVLDFDGTQTD-DRVLIDSDGREFVSVHRGDGLGIAALRKS-GLTMLILSTEQ--------NPVVAARARKLKIP 79 (176)
T ss_dssp GGCSEEEECCTTTTSC-SCCEECTTCCEEEEEEHHHHHHHHHHHHT-TCEEEEEESSC--------CHHHHHHHHHHTCC
T ss_pred hcCCEEEEeCCCCcCc-CCEeecCCccHhHhcccccHHHHHHHHHC-CCeEEEEECcC--------hHHHHHHHHHcCCe
Confidence 5799999999999994 333221 1111 148889987 99999999997 67899999999998
Q ss_pred EEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 251 vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
++.+ .||.+ .++++++++|+++++++||||+.+|+.+++.
T Consensus 80 -~~~~-~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ 120 (176)
T 3mmz_A 80 -VLHG-IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFAL 120 (176)
T ss_dssp -EEES-CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred -eEeC-CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHH
Confidence 4444 37776 4889999999999999999999999776654
No 20
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.54 E-value=6.7e-15 Score=126.45 Aligned_cols=100 Identities=18% Similarity=0.091 Sum_probs=76.5
Q ss_pred HHcCCcEEEEeccCeeecCCCcccCchH----------HHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHH--H
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLWGPL----------SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG--K 246 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~Pgv----------~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk--~ 246 (299)
+.++||+|+||+||||| ++...+.+.. ...|+.|++. |++++|+||+. .++.+++ .
T Consensus 5 ~~~~ikliv~D~DGtL~-d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~~-Gi~~~I~Tg~~----------~~~~~l~~l~ 72 (168)
T 3ewi_A 5 KLKEIKLLVCNIDGCLT-NGHIYVSGDQKEIISYDVKDAIGISLLKKS-GIEVRLISERA----------CSKQTLSALK 72 (168)
T ss_dssp --CCCCEEEEECCCCCS-CSCCBCCSSCCCEEEEEHHHHHHHHHHHHT-TCEEEEECSSC----------CCHHHHHTTC
T ss_pred hHhcCcEEEEeCccceE-CCcEEEcCCCCEEEEEecCcHHHHHHHHHC-CCEEEEEeCcH----------HHHHHHHHhC
Confidence 46899999999999999 5555544331 2468899997 99999999982 3555667 6
Q ss_pred cCCcEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 247 IGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 247 LGI~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
+|+. ++.+. ++.+ .++++++++|++|++++||||+.+|+.+++.
T Consensus 73 lgi~-~~~g~-~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ 117 (168)
T 3ewi_A 73 LDCK-TEVSV-SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKR 117 (168)
T ss_dssp CCCC-EECSC-SCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHH
T ss_pred CCcE-EEECC-CChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHH
Confidence 7887 44443 4555 5889999999999999999999999776654
No 21
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=99.48 E-value=2.1e-14 Score=126.04 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=64.6
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EEc----cCCCCHHH-HHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRH----RVKKPAGT-AEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~h----a~KKP~p~-le~alk~lGi 272 (299)
+.|++.+.++.|++. |++++|+||+. .+..+++.+|+.. +.. +..||+|. +..+++++|+
T Consensus 96 ~~pg~~~ll~~L~~~-g~~i~i~t~~~----------~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~ 164 (243)
T 4g9b_A 96 VLPGIRSLLADLRAQ-QISVGLASVSL----------NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGV 164 (243)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEECCCCT----------THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTS
T ss_pred ccccHHHHHHhhhcc-cccceeccccc----------chhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCC
Confidence 356777888888887 99999999975 2455677888742 221 35799885 8999999999
Q ss_pred CCCcEEEEcCCccccccccee
Q 022336 273 QSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~~ 293 (299)
+|++|+||||+..||.||+.+
T Consensus 165 ~p~e~l~VgDs~~di~aA~~a 185 (243)
T 4g9b_A 165 PPQACIGIEDAQAGIDAINAS 185 (243)
T ss_dssp CGGGEEEEESSHHHHHHHHHH
T ss_pred ChHHEEEEcCCHHHHHHHHHc
Confidence 999999999999999998753
No 22
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=99.48 E-value=3.7e-14 Score=116.91 Aligned_cols=84 Identities=10% Similarity=0.098 Sum_probs=67.8
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhC
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFG 271 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lG 271 (299)
.+.|++.+.++.|++. |++++|+||+. ...++.+.+.+|+. .+.. ...||.+ .++.+++++|
T Consensus 84 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~ 154 (216)
T 2pib_A 84 KENPGVREALEFVKSK-RIKLALATSTP--------QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLN 154 (216)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHT
T ss_pred CcCcCHHHHHHHHHHC-CCCEEEEeCCc--------HHhHHHHHHhcChHHhcCEEeecccCCCCCcCcHHHHHHHHHcC
Confidence 3456777888889887 99999999997 67788888888874 2222 3467776 4899999999
Q ss_pred CCCCcEEEEcCCccccccccee
Q 022336 272 CQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 272 i~PeEiamVGDrl~DI~gAn~~ 293 (299)
++|++++||||+.+||.+|+.+
T Consensus 155 ~~~~~~i~iGD~~~Di~~a~~a 176 (216)
T 2pib_A 155 VVPEKVVVFEDSKSGVEAAKSA 176 (216)
T ss_dssp CCGGGEEEEECSHHHHHHHHHT
T ss_pred CCCceEEEEeCcHHHHHHHHHc
Confidence 9999999999999998887643
No 23
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=99.48 E-value=3e-14 Score=122.23 Aligned_cols=82 Identities=13% Similarity=0.122 Sum_probs=67.2
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~ 273 (299)
.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|++
T Consensus 107 ~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 177 (240)
T 2no4_A 107 YPDAAETLEKLKSA-GYIVAILSNGN--------DEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVN 177 (240)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHC-CCEEEEEcCCC--------HHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCC
Confidence 37888889999987 99999999997 67788888888874 2221 3468887 488999999999
Q ss_pred CCcEEEEcCCccccccccee
Q 022336 274 SSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~~ 293 (299)
|++++||||+..||.+|+.+
T Consensus 178 ~~~~~~iGD~~~Di~~a~~a 197 (240)
T 2no4_A 178 PNEVCFVSSNAWDLGGAGKF 197 (240)
T ss_dssp GGGEEEEESCHHHHHHHHHH
T ss_pred cccEEEEeCCHHHHHHHHHC
Confidence 99999999999998887643
No 24
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=99.48 E-value=4.3e-14 Score=118.92 Aligned_cols=82 Identities=17% Similarity=0.245 Sum_probs=67.4
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.++.|++. |++++|+||+. ...++.+.+.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 97 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 167 (230)
T 3um9_A 97 PFADVPQALQQLRAA-GLKTAILSNGS--------RHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHL 167 (230)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEESSC--------HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHhC-CCeEEEEeCCC--------HHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCC
Confidence 467788888999987 99999999997 67788888888863 2221 3468876 48999999999
Q ss_pred CCCcEEEEcCCcccccccce
Q 022336 273 QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~ 292 (299)
+|++++||||+.+||.+|+.
T Consensus 168 ~~~~~~~iGD~~~Di~~a~~ 187 (230)
T 3um9_A 168 GESEILFVSCNSWDATGAKY 187 (230)
T ss_dssp CGGGEEEEESCHHHHHHHHH
T ss_pred CcccEEEEeCCHHHHHHHHH
Confidence 99999999999999888764
No 25
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=99.48 E-value=1.9e-14 Score=120.92 Aligned_cols=83 Identities=14% Similarity=0.126 Sum_probs=68.1
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEE------c---cCCCCHH-HHHHHHHHhC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR------H---RVKKPAG-TAEEIEKHFG 271 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~------h---a~KKP~p-~le~alk~lG 271 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+..++ . ...||.+ .++.+++++|
T Consensus 71 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g 141 (205)
T 3m9l_A 71 PAPGAVELVRELAGR-GYRLGILTRNA--------RELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWD 141 (205)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTT
T ss_pred CCccHHHHHHHHHhc-CCeEEEEeCCc--------hHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcC
Confidence 467888889999997 99999999997 67888888888873222 1 3467776 5899999999
Q ss_pred CCCCcEEEEcCCccccccccee
Q 022336 272 CQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 272 i~PeEiamVGDrl~DI~gAn~~ 293 (299)
++|++|+||||+.+||.+|+.+
T Consensus 142 ~~~~~~i~iGD~~~Di~~a~~a 163 (205)
T 3m9l_A 142 VSPSRMVMVGDYRFDLDCGRAA 163 (205)
T ss_dssp CCGGGEEEEESSHHHHHHHHHH
T ss_pred CCHHHEEEECCCHHHHHHHHHc
Confidence 9999999999999998887643
No 26
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=99.47 E-value=3e-14 Score=120.44 Aligned_cols=81 Identities=15% Similarity=0.181 Sum_probs=66.5
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~ 273 (299)
.|++.+.|+.|++. |++++|+||+. ...+..+.+.+|+. .+.. ...||.+ .++.+++++|++
T Consensus 101 ~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 171 (233)
T 3umb_A 101 FPENVPVLRQLREM-GLPLGILSNGN--------PQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVP 171 (233)
T ss_dssp CTTHHHHHHHHHTT-TCCEEEEESSC--------HHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSC
T ss_pred CCCHHHHHHHHHhC-CCcEEEEeCCC--------HHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCC
Confidence 56777788888887 99999999997 67788888888863 2221 3468887 488999999999
Q ss_pred CCcEEEEcCCcccccccce
Q 022336 274 SSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~ 292 (299)
|++|+||||+.+||.+|+.
T Consensus 172 ~~~~~~vGD~~~Di~~a~~ 190 (233)
T 3umb_A 172 AAQILFVSSNGWDACGATW 190 (233)
T ss_dssp GGGEEEEESCHHHHHHHHH
T ss_pred cccEEEEeCCHHHHHHHHH
Confidence 9999999999999888765
No 27
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.47 E-value=8.7e-14 Score=116.67 Aligned_cols=83 Identities=7% Similarity=0.019 Sum_probs=68.6
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc------------------cCCCCHH-H
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-T 262 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h------------------a~KKP~p-~ 262 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+..++. ...||.+ .
T Consensus 76 ~~~~~~~~l~~l~~~-g~~~~i~S~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~ 146 (217)
T 3m1y_A 76 LFEGALELVSALKEK-NYKVVCFSGGF--------DLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEM 146 (217)
T ss_dssp BCBTHHHHHHHHHTT-TEEEEEEEEEE--------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHH
T ss_pred CCCCHHHHHHHHHHC-CCEEEEEcCCc--------hhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHH
Confidence 567888999999997 99999999987 678888889999853321 1357777 4
Q ss_pred HHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 263 AEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 263 le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
++.+++++|++|++++||||+..||.+|+.+
T Consensus 147 ~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~a 177 (217)
T 3m1y_A 147 LLVLQRLLNISKTNTLVVGDGANDLSMFKHA 177 (217)
T ss_dssp HHHHHHHHTCCSTTEEEEECSGGGHHHHTTC
T ss_pred HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHC
Confidence 8999999999999999999999998877653
No 28
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=99.45 E-value=4.6e-14 Score=119.85 Aligned_cols=81 Identities=19% Similarity=0.277 Sum_probs=66.5
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~ 273 (299)
.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|++
T Consensus 97 ~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 167 (232)
T 1zrn_A 97 FSEVPDSLRELKRR-GLKLAILSNGS--------PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLD 167 (232)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSC
T ss_pred CccHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCC
Confidence 47788888899987 99999999997 66788888888863 2221 3468887 488999999999
Q ss_pred CCcEEEEcCCcccccccce
Q 022336 274 SSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~ 292 (299)
|++++||||+.+||.+|+.
T Consensus 168 ~~~~~~iGD~~~Di~~a~~ 186 (232)
T 1zrn_A 168 RSAILFVASNAWDATGARY 186 (232)
T ss_dssp GGGEEEEESCHHHHHHHHH
T ss_pred cccEEEEeCCHHHHHHHHH
Confidence 9999999999999887764
No 29
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=99.45 E-value=5.8e-14 Score=135.44 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=85.1
Q ss_pred cCCcEEEEeccCeeecCC----------Cc-ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCcc----HHHHHHHHH
Q 022336 181 RGFKGVVFDKDNTLTAPY----------SL-TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDND----ASKARKLEG 245 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~----------~~-~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~----~e~a~~~lk 245 (299)
..+|+|+||+||||+... +. .+.|++.++|+.|++. |++++|+||+.|+++.... ...+..+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~ 134 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLE 134 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCccccCCCCCHHHHHHHHHHHHH
Confidence 468999999999997432 11 2689999999999997 9999999998754321111 124777888
Q ss_pred HcCCc--EEE----ccCCCCHHH-HHHHHHHhC----CCCCcEEEEcCCc-----------------ccccccce
Q 022336 246 KIGIK--VIR----HRVKKPAGT-AEEIEKHFG----CQSSQLIMVDMCR-----------------IVIFPGPV 292 (299)
Q Consensus 246 ~LGI~--vI~----ha~KKP~p~-le~alk~lG----i~PeEiamVGDrl-----------------~DI~gAn~ 292 (299)
.+|+. ++. ....||.+. ++.+++++| ++|++++||||++ .||.+|+.
T Consensus 135 ~lgl~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~ 209 (416)
T 3zvl_A 135 KLGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALN 209 (416)
T ss_dssp HHTSCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHH
T ss_pred HcCCCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHH
Confidence 88864 222 135799885 889999997 9999999999998 67888864
No 30
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=99.45 E-value=7.1e-14 Score=118.60 Aligned_cols=82 Identities=13% Similarity=0.069 Sum_probs=66.8
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.++.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 104 ~~~~~~~~l~~l~~~-g~~~~i~T~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi 174 (231)
T 3kzx_A 104 LNDGAIELLDTLKEN-NITMAIVSNKN--------GERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINI 174 (231)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTC
T ss_pred ECcCHHHHHHHHHHC-CCeEEEEECCC--------HHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCC
Confidence 456778888899987 99999999987 67888888888863 2221 3467776 48999999999
Q ss_pred CCC-cEEEEcCCcccccccce
Q 022336 273 QSS-QLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~Pe-EiamVGDrl~DI~gAn~ 292 (299)
+|+ +++||||+.+||.+|+.
T Consensus 175 ~~~~~~v~vGD~~~Di~~a~~ 195 (231)
T 3kzx_A 175 EPSKEVFFIGDSISDIQSAIE 195 (231)
T ss_dssp CCSTTEEEEESSHHHHHHHHH
T ss_pred CcccCEEEEcCCHHHHHHHHH
Confidence 999 99999999999887764
No 31
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=99.43 E-value=8.4e-14 Score=114.61 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=66.9
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.|+.+++. |++++|+||+. ...++.+.+.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 90 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 160 (214)
T 3e58_A 90 IFPDVLKVLNEVKSQ-GLEIGLASSSV--------KADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNV 160 (214)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTC
T ss_pred cCchHHHHHHHHHHC-CCCEEEEeCCc--------HHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCC
Confidence 456777888889887 99999999997 77888889998873 2221 3467776 58999999999
Q ss_pred CCCcEEEEcCCcccccccce
Q 022336 273 QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~ 292 (299)
+|++++||||+.+||.+|+.
T Consensus 161 ~~~~~~~iGD~~~Di~~a~~ 180 (214)
T 3e58_A 161 QASRALIIEDSEKGIAAGVA 180 (214)
T ss_dssp CGGGEEEEECSHHHHHHHHH
T ss_pred ChHHeEEEeccHhhHHHHHH
Confidence 99999999999999887764
No 32
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=99.43 E-value=9.2e-14 Score=118.06 Aligned_cols=82 Identities=16% Similarity=0.237 Sum_probs=65.9
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 105 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~ 175 (237)
T 4ex6_A 105 LYPGVLEGLDRLSAA-GFRLAMATSKV--------EKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGI 175 (237)
T ss_dssp BCTTHHHHHHHHHHT-TEEEEEECSSC--------HHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHhC-CCcEEEEcCCC--------hHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCC
Confidence 456677888888887 99999999987 67788888888863 2222 2357776 48999999999
Q ss_pred CCCcEEEEcCCcccccccce
Q 022336 273 QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~ 292 (299)
+|++|+||||+.+||.+|+.
T Consensus 176 ~~~~~i~vGD~~~Di~~a~~ 195 (237)
T 4ex6_A 176 PPERCVVIGDGVPDAEMGRA 195 (237)
T ss_dssp CGGGEEEEESSHHHHHHHHH
T ss_pred CHHHeEEEcCCHHHHHHHHH
Confidence 99999999999999887764
No 33
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=99.42 E-value=1.6e-13 Score=115.44 Aligned_cols=83 Identities=8% Similarity=0.095 Sum_probs=67.4
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.++.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 87 ~~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi 157 (226)
T 3mc1_A 87 VYDGIEALLSSLKDY-GFHLVVATSKP--------TVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNI 157 (226)
T ss_dssp BCTTHHHHHHHHHHH-TCEEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTC
T ss_pred cCcCHHHHHHHHHHC-CCeEEEEeCCC--------HHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCc
Confidence 456777888889987 99999999986 67788888888874 2211 3468887 48999999999
Q ss_pred CCCcEEEEcCCccccccccee
Q 022336 273 QSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~~ 293 (299)
+|++|+||||+.+||.+|+.+
T Consensus 158 ~~~~~i~iGD~~~Di~~a~~a 178 (226)
T 3mc1_A 158 KSDDAIMIGDREYDVIGALKN 178 (226)
T ss_dssp CGGGEEEEESSHHHHHHHHTT
T ss_pred CcccEEEECCCHHHHHHHHHC
Confidence 999999999999998876643
No 34
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.42 E-value=3.1e-13 Score=115.01 Aligned_cols=81 Identities=10% Similarity=0.119 Sum_probs=64.3
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EE--ccCCCCHHH-HHHHHHHhCCCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR--HRVKKPAGT-AEEIEKHFGCQSS 275 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~--ha~KKP~p~-le~alk~lGi~Pe 275 (299)
.|++.+.|+.|++ |++++|+||+. ...++.+++.+|+.. +. ....||.|. ++.+++++|++|+
T Consensus 86 ~~g~~~~l~~L~~--~~~l~i~T~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~ 155 (210)
T 2ah5_A 86 FPQIIDLLEELSS--SYPLYITTTKD--------TSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPE 155 (210)
T ss_dssp CTTHHHHHHHHHT--TSCEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGG
T ss_pred CCCHHHHHHHHHc--CCeEEEEeCCC--------HHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCCCcc
Confidence 3566666777765 89999999987 667788888888741 21 134689884 8999999999999
Q ss_pred cEEEEcCCccccccccee
Q 022336 276 QLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 276 EiamVGDrl~DI~gAn~~ 293 (299)
+|+||||+.+||.+|+.+
T Consensus 156 ~~~~vgDs~~Di~~a~~a 173 (210)
T 2ah5_A 156 QAIIIGDTKFDMLGARET 173 (210)
T ss_dssp GEEEEESSHHHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHC
Confidence 999999999999888753
No 35
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=99.41 E-value=1.1e-13 Score=121.62 Aligned_cols=80 Identities=19% Similarity=0.113 Sum_probs=62.3
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHHH-HHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAGT-AEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p~-le~alk~lGi~ 273 (299)
.|++.+.++.|++. |++++++|++. .+..+++.+|+. .+.. +..||.|. +..+++++|++
T Consensus 118 ~p~~~~ll~~Lk~~-g~~i~i~~~~~----------~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~~ 186 (250)
T 4gib_A 118 LPGIESLLIDVKSN-NIKIGLSSASK----------NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVN 186 (250)
T ss_dssp CTTHHHHHHHHHHT-TCEEEECCSCT----------THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTCC
T ss_pred chhHHHHHHHHHhc-ccccccccccc----------hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCCC
Confidence 46677777888886 99999887764 244567788874 2221 35789874 89999999999
Q ss_pred CCcEEEEcCCccccccccee
Q 022336 274 SSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~~ 293 (299)
|++|+||||+..||.||+.+
T Consensus 187 p~e~l~VGDs~~Di~aA~~a 206 (250)
T 4gib_A 187 PQNCIGIEDASAGIDAINSA 206 (250)
T ss_dssp GGGEEEEESSHHHHHHHHHT
T ss_pred hHHeEEECCCHHHHHHHHHc
Confidence 99999999999999988753
No 36
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=3.1e-13 Score=112.69 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=64.0
Q ss_pred cCchHHHHHHHHHHhCC-CcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEccCCCCHH-HHHHHHHHhCCCCC
Q 022336 202 LWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRHRVKKPAG-TAEEIEKHFGCQSS 275 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fG-ikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~ha~KKP~p-~le~alk~lGi~Pe 275 (299)
+.|++.+.++.|++. | ++++|+||.. ...+..+.+.+|+. .+.. ..||.+ .++.+++++|++|+
T Consensus 106 ~~~~~~~~l~~l~~~-g~~~~~i~t~~~--------~~~~~~~l~~~~~~~~f~~~~~-~~kpk~~~~~~~~~~lgi~~~ 175 (234)
T 3ddh_A 106 LLPGVKETLKTLKET-GKYKLVVATKGD--------LLDQENKLERSGLSPYFDHIEV-MSDKTEKEYLRLLSILQIAPS 175 (234)
T ss_dssp BCTTHHHHHHHHHHH-CCCEEEEEEESC--------HHHHHHHHHHHTCGGGCSEEEE-ESCCSHHHHHHHHHHHTCCGG
T ss_pred cCccHHHHHHHHHhC-CCeEEEEEeCCc--------hHHHHHHHHHhCcHhhhheeee-cCCCCHHHHHHHHHHhCCCcc
Confidence 356667778888887 9 9999999986 66777888888863 2222 346666 58999999999999
Q ss_pred cEEEEcCCc-ccccccce
Q 022336 276 QLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 276 EiamVGDrl-~DI~gAn~ 292 (299)
+|++|||++ +||.+|+.
T Consensus 176 ~~i~iGD~~~~Di~~a~~ 193 (234)
T 3ddh_A 176 ELLMVGNSFKSDIQPVLS 193 (234)
T ss_dssp GEEEEESCCCCCCHHHHH
T ss_pred eEEEECCCcHHHhHHHHH
Confidence 999999997 99987654
No 37
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=99.40 E-value=1.6e-13 Score=115.26 Aligned_cols=82 Identities=9% Similarity=0.039 Sum_probs=66.5
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.|+.|++. |++++|+||.. ...++.+++.+|+.. +.. ...||.+ .++.+++++|+
T Consensus 92 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~ 162 (233)
T 3s6j_A 92 ALPGAVELLETLDKE-NLKWCIATSGG--------IDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGA 162 (233)
T ss_dssp ECTTHHHHHHHHHHT-TCCEEEECSSC--------HHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHHC-CCeEEEEeCCc--------hhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCC
Confidence 456777888889887 99999999987 677888888888642 221 3467776 58999999999
Q ss_pred CCCcEEEEcCCcccccccce
Q 022336 273 QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~ 292 (299)
+|++++||||+..||.+|+.
T Consensus 163 ~~~~~i~iGD~~~Di~~a~~ 182 (233)
T 3s6j_A 163 PIDECLVIGDAIWDMLAARR 182 (233)
T ss_dssp CGGGEEEEESSHHHHHHHHH
T ss_pred CHHHEEEEeCCHHhHHHHHH
Confidence 99999999999999887764
No 38
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=99.39 E-value=3.1e-13 Score=116.78 Aligned_cols=83 Identities=11% Similarity=-0.063 Sum_probs=64.2
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC-----cEEEc----cCCCCHH-HHHHHHHHhC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-----KVIRH----RVKKPAG-TAEEIEKHFG 271 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI-----~vI~h----a~KKP~p-~le~alk~lG 271 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+.+.+|+ ..+.. ...||.+ .++.+++++|
T Consensus 112 ~~~~~~~~l~~l~~~-g~~~~i~tn~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg 182 (277)
T 3iru_A 112 LIPGWKEVFDKLIAQ-GIKVGGNTGYG--------PGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELE 182 (277)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHT
T ss_pred cCcCHHHHHHHHHHc-CCeEEEEeCCc--------hHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcC
Confidence 356667778888887 99999999987 5666777776553 22222 3457776 5899999999
Q ss_pred CCC-CcEEEEcCCccccccccee
Q 022336 272 CQS-SQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 272 i~P-eEiamVGDrl~DI~gAn~~ 293 (299)
++| ++|+||||+.+||.+|+.+
T Consensus 183 i~~~~~~i~vGD~~~Di~~a~~a 205 (277)
T 3iru_A 183 VGHVNGCIKVDDTLPGIEEGLRA 205 (277)
T ss_dssp CSCGGGEEEEESSHHHHHHHHHT
T ss_pred CCCCccEEEEcCCHHHHHHHHHC
Confidence 999 9999999999998887654
No 39
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=99.38 E-value=2.6e-13 Score=119.87 Aligned_cols=82 Identities=21% Similarity=0.168 Sum_probs=67.2
Q ss_pred cCchHHHHHHHHHHhCCC--cEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc--------cCCCCHH-HHHHH
Q 022336 202 LWGPLSSSIEQCKSVFGH--DIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH--------RVKKPAG-TAEEI 266 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGi--kVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h--------a~KKP~p-~le~a 266 (299)
+.|++.+.|+.|++. |+ +++|+||+. ...++.+.+.+|+. .+.. ...||.+ .++.+
T Consensus 143 ~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~--------~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~ 213 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQS-GKIDKLWLFTNAY--------KNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKA 213 (282)
T ss_dssp CCHHHHHHHHHHHHS-SSCSEEEEECSSC--------HHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHH
T ss_pred cChhHHHHHHHHHhC-CCCceEEEEECCC--------hHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHH
Confidence 467888899999997 99 999999987 67788888888863 2221 2358877 48999
Q ss_pred HHHhCCCC-CcEEEEcCCcccccccce
Q 022336 267 EKHFGCQS-SQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 267 lk~lGi~P-eEiamVGDrl~DI~gAn~ 292 (299)
++++|++| ++|+||||+.+||.+|+.
T Consensus 214 ~~~lgi~~~~~~i~vGD~~~Di~~a~~ 240 (282)
T 3nuq_A 214 MKESGLARYENAYFIDDSGKNIETGIK 240 (282)
T ss_dssp HHHHTCCCGGGEEEEESCHHHHHHHHH
T ss_pred HHHcCCCCcccEEEEcCCHHHHHHHHH
Confidence 99999999 999999999999888764
No 40
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=99.38 E-value=3.8e-13 Score=115.44 Aligned_cols=82 Identities=21% Similarity=0.253 Sum_probs=66.7
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 84 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~ 154 (222)
T 2nyv_A 84 PYPEIPYTLEALKSK-GFKLAVVSNKL--------EELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGE 154 (222)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHC-CCeEEEEcCCC--------HHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCC
Confidence 457777888889887 99999999987 67788888888864 2322 2467876 48899999999
Q ss_pred CCCcEEEEcCCcccccccce
Q 022336 273 QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~ 292 (299)
+|++|+||||+..||.+|+.
T Consensus 155 ~~~~~~~vGD~~~Di~~a~~ 174 (222)
T 2nyv_A 155 EPEKALIVGDTDADIEAGKR 174 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHH
T ss_pred CchhEEEECCCHHHHHHHHH
Confidence 99999999999999888764
No 41
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.38 E-value=5.1e-13 Score=112.42 Aligned_cols=81 Identities=14% Similarity=0.014 Sum_probs=63.8
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.++.++ . |++++|+||+. ...++.+.+.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 108 ~~~~~~~~l~~l~-~-g~~~~i~sn~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi 177 (240)
T 3qnm_A 108 LMPHAKEVLEYLA-P-QYNLYILSNGF--------RELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQS 177 (240)
T ss_dssp BSTTHHHHHHHHT-T-TSEEEEEECSC--------HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTTC
T ss_pred cCccHHHHHHHHH-c-CCeEEEEeCCc--------hHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcCC
Confidence 3566677777787 5 89999999986 67778888888863 2221 3467876 48999999999
Q ss_pred CCCcEEEEcCCc-ccccccce
Q 022336 273 QSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl-~DI~gAn~ 292 (299)
+|+++++|||++ +||.+|+.
T Consensus 178 ~~~~~~~iGD~~~~Di~~a~~ 198 (240)
T 3qnm_A 178 ELRESLMIGDSWEADITGAHG 198 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHH
T ss_pred CcccEEEECCCchHhHHHHHH
Confidence 999999999996 99887764
No 42
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=99.37 E-value=6e-13 Score=124.13 Aligned_cols=83 Identities=10% Similarity=0.026 Sum_probs=69.7
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEcc------------------CCCCHHH-
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHR------------------VKKPAGT- 262 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha------------------~KKP~p~- 262 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+..++.. ..||.+.
T Consensus 180 l~pg~~e~L~~Lk~~-G~~v~IvSn~~--------~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~ 250 (317)
T 4eze_A 180 LSPGLLTILPVIKAK-GFKTAIISGGL--------DIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQT 250 (317)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH
T ss_pred ECcCHHHHHHHHHhC-CCEEEEEeCcc--------HHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHH
Confidence 678999999999997 99999999987 7889999999998644321 2367764
Q ss_pred HHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 263 AEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 263 le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
++.+++++|++|++++||||+..||.+|+.+
T Consensus 251 ~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~A 281 (317)
T 4eze_A 251 LVDLAARLNIATENIIACGDGANDLPMLEHA 281 (317)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHcCCCcceEEEEeCCHHHHHHHHHC
Confidence 8899999999999999999999998877643
No 43
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=99.37 E-value=4.5e-13 Score=116.16 Aligned_cols=82 Identities=13% Similarity=0.089 Sum_probs=66.8
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----E-EEc----c-CCCCHH-HHHHHHHHh
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----V-IRH----R-VKKPAG-TAEEIEKHF 270 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----v-I~h----a-~KKP~p-~le~alk~l 270 (299)
+.|++.+.|+.|++. |++++|+||.. ...++.+++.+|+. . +.. . ..||.+ .++.+++++
T Consensus 111 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~l 181 (259)
T 4eek_A 111 AIEGAAETLRALRAA-GVPFAIGSNSE--------RGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQL 181 (259)
T ss_dssp ECTTHHHHHHHHHHH-TCCEEEECSSC--------HHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHT
T ss_pred cCccHHHHHHHHHHC-CCeEEEEeCCC--------HHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHc
Confidence 456777888889887 99999999997 67788888888863 2 221 3 568776 489999999
Q ss_pred CCCCCcEEEEcCCcccccccce
Q 022336 271 GCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 271 Gi~PeEiamVGDrl~DI~gAn~ 292 (299)
|++|++|+||||+.+||.+|+.
T Consensus 182 gi~~~~~i~iGD~~~Di~~a~~ 203 (259)
T 4eek_A 182 GILPERCVVIEDSVTGGAAGLA 203 (259)
T ss_dssp TCCGGGEEEEESSHHHHHHHHH
T ss_pred CCCHHHEEEEcCCHHHHHHHHH
Confidence 9999999999999999887764
No 44
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=99.36 E-value=3.2e-14 Score=118.44 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=59.3
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc----cCCCCHHH-HHHHHHHhCCCCCc
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH----RVKKPAGT-AEEIEKHFGCQSSQ 276 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h----a~KKP~p~-le~alk~lGi~PeE 276 (299)
+.|++.+.|+.|++. |++++|+||+..... .........+...+ ..+.. +..||.+. +..+++++|++|++
T Consensus 92 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~-~~~~~~~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 167 (206)
T 2b0c_A 92 LRPEVIAIMHKLREQ-GHRVVVLSNTNRLHT-TFWPEEYPEIRDAA--DHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD 167 (206)
T ss_dssp ECHHHHHHHHHHHHT-TCEEEEEECCCCCTT-SCCGGGCHHHHHHC--SEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred cCccHHHHHHHHHHC-CCeEEEEECCChHHH-HHHHHhccChhhhe--eeEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 456778888889887 999999999862110 00001101122222 22221 35688874 88999999999999
Q ss_pred EEEEcCCcccccccce
Q 022336 277 LIMVDMCRIVIFPGPV 292 (299)
Q Consensus 277 iamVGDrl~DI~gAn~ 292 (299)
++||||+..||.+|+.
T Consensus 168 ~~~vgD~~~Di~~a~~ 183 (206)
T 2b0c_A 168 TVFFDDNADNIEGANQ 183 (206)
T ss_dssp EEEEESCHHHHHHHHT
T ss_pred eEEeCCCHHHHHHHHH
Confidence 9999999999887764
No 45
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=99.36 E-value=3.1e-13 Score=114.51 Aligned_cols=81 Identities=16% Similarity=0.082 Sum_probs=61.2
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.|+.|++. |++++|+||+. . +..+++.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 93 ~~~~~~~~l~~l~~~-g~~~~i~t~~~--------~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi 161 (233)
T 3nas_A 93 LLPGIGRLLCQLKNE-NIKIGLASSSR--------N--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDV 161 (233)
T ss_dssp SCTTHHHHHHHHHHT-TCEEEECCSCT--------T--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTS
T ss_pred cCcCHHHHHHHHHHC-CCcEEEEcCch--------h--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCC
Confidence 477888889999987 99999999985 2 66677888763 2221 2467776 58999999999
Q ss_pred CCCcEEEEcCCccccccccee
Q 022336 273 QSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~~ 293 (299)
+|++|+||||+.+||.+|+.+
T Consensus 162 ~~~~~i~vGDs~~Di~~a~~a 182 (233)
T 3nas_A 162 SPADCAAIEDAEAGISAIKSA 182 (233)
T ss_dssp CGGGEEEEECSHHHHHHHHHT
T ss_pred CHHHEEEEeCCHHHHHHHHHc
Confidence 999999999999998887643
No 46
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=99.36 E-value=4.1e-13 Score=114.85 Aligned_cols=82 Identities=12% Similarity=0.116 Sum_probs=67.0
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEE----ccCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~----ha~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. .+. ....||.+ .++.+++++|+
T Consensus 111 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~ 181 (240)
T 3sd7_A 111 IYENMKEILEMLYKN-GKILLVATSKP--------TVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNV 181 (240)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTC
T ss_pred cCccHHHHHHHHHHC-CCeEEEEeCCc--------HHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence 456777888889987 99999999986 67888888888873 222 13468887 48999999999
Q ss_pred C-CCcEEEEcCCcccccccce
Q 022336 273 Q-SSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~-PeEiamVGDrl~DI~gAn~ 292 (299)
+ |+++++|||+..||.+|+.
T Consensus 182 ~~~~~~i~vGD~~~Di~~a~~ 202 (240)
T 3sd7_A 182 KDKDKVIMVGDRKYDIIGAKK 202 (240)
T ss_dssp CCGGGEEEEESSHHHHHHHHH
T ss_pred CCCCcEEEECCCHHHHHHHHH
Confidence 9 9999999999999887764
No 47
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=99.36 E-value=7.4e-13 Score=115.21 Aligned_cols=80 Identities=16% Similarity=0.223 Sum_probs=63.1
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~ 273 (299)
.|++.+.|+.|+ |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|++
T Consensus 95 ~~~~~~~l~~l~---g~~~~i~t~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 163 (253)
T 1qq5_A 95 YPDAAQCLAELA---PLKRAILSNGA--------PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVT 163 (253)
T ss_dssp CTTHHHHHHHHT---TSEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCC
T ss_pred CccHHHHHHHHc---CCCEEEEeCcC--------HHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCC
Confidence 356666666665 79999999997 67788888888874 2221 3468887 489999999999
Q ss_pred CCcEEEEcCCccccccccee
Q 022336 274 SSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~~ 293 (299)
|++|+||||+..||.+|+.+
T Consensus 164 ~~~~~~vGD~~~Di~~a~~a 183 (253)
T 1qq5_A 164 PAEVLFVSSNGFDVGGAKNF 183 (253)
T ss_dssp GGGEEEEESCHHHHHHHHHH
T ss_pred HHHEEEEeCChhhHHHHHHC
Confidence 99999999999998887653
No 48
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.35 E-value=3.9e-13 Score=125.34 Aligned_cols=89 Identities=11% Similarity=0.129 Sum_probs=62.2
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcC--CcEEEc----cCCCCHHH-HHHHHHHhCCCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG--IKVIRH----RVKKPAGT-AEEIEKHFGCQS 274 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LG--I~vI~h----a~KKP~p~-le~alk~lGi~P 274 (299)
+.|++.+.|+.|++. |++++|+||+... ..............++ ++.+.. +..||+|. ++.+++++|++|
T Consensus 101 ~~~~~~~~L~~L~~~-g~~~~i~Tn~~~~--~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p 177 (555)
T 3i28_A 101 INRPMLQAALMLRKK-GFTTAILTNTWLD--DRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP 177 (555)
T ss_dssp ECHHHHHHHHHHHHT-TCEEEEEECCCCC--CSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred cChhHHHHHHHHHHC-CCEEEEEeCCCcc--ccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCCh
Confidence 456777888889997 9999999998200 0111233333322221 233322 45799985 899999999999
Q ss_pred CcEEEEcCCccccccccee
Q 022336 275 SQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 275 eEiamVGDrl~DI~gAn~~ 293 (299)
++|+||||+..||.+|+.+
T Consensus 178 ~~~~~v~D~~~di~~a~~a 196 (555)
T 3i28_A 178 SEVVFLDDIGANLKPARDL 196 (555)
T ss_dssp GGEEEEESCHHHHHHHHHH
T ss_pred hHEEEECCcHHHHHHHHHc
Confidence 9999999999999988753
No 49
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=99.35 E-value=5.2e-13 Score=117.62 Aligned_cols=81 Identities=15% Similarity=0.156 Sum_probs=64.0
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EEc----cCCCCHHH-HHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRH----RVKKPAGT-AEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~h----a~KKP~p~-le~alk~lGi 272 (299)
+.|++.+.|+.|++. |++++|+||.. . .+..+++.+|+.. +.. ...||.+. +..+++++|+
T Consensus 107 ~~~~~~~~l~~l~~~-g~~~~i~tn~~--------~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~ 176 (263)
T 3k1z_A 107 VLDGAEDTLRECRTR-GLRLAVISNFD--------R-RLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHM 176 (263)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEEESCC--------T-THHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHTC
T ss_pred ECcCHHHHHHHHHhC-CCcEEEEeCCc--------H-HHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcCC
Confidence 456677888888887 99999999975 2 3577788888731 211 35788874 8999999999
Q ss_pred CCCcEEEEcCCc-ccccccce
Q 022336 273 QSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl-~DI~gAn~ 292 (299)
+|++|+||||++ .||.+|+.
T Consensus 177 ~~~~~~~vGD~~~~Di~~a~~ 197 (263)
T 3k1z_A 177 EPVVAAHVGDNYLCDYQGPRA 197 (263)
T ss_dssp CGGGEEEEESCHHHHTHHHHT
T ss_pred CHHHEEEECCCcHHHHHHHHH
Confidence 999999999998 99888764
No 50
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=99.35 E-value=5.5e-13 Score=113.32 Aligned_cols=81 Identities=12% Similarity=0.094 Sum_probs=59.6
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc------EEEc----cCCCCHH-HHHHHHHHh
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIRH----RVKKPAG-TAEEIEKHF 270 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~------vI~h----a~KKP~p-~le~alk~l 270 (299)
+.|++.+.|+.|++. |++++|+||+. ...+...++. |+. .+.. ...||.+ .++.+++++
T Consensus 109 ~~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~~~l 178 (247)
T 3dv9_A 109 RMPGALEVLTKIKSE-GLTPMVVTGSG--------QTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKG 178 (247)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECSCC-----------CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHc-CCcEEEEcCCc--------hHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHHHHc
Confidence 446777888889887 99999999987 3334444444 442 1221 3467776 489999999
Q ss_pred CCCCCcEEEEcCCcccccccce
Q 022336 271 GCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 271 Gi~PeEiamVGDrl~DI~gAn~ 292 (299)
|++|++|+||||+.+||.+|+.
T Consensus 179 g~~~~~~i~vGD~~~Di~~a~~ 200 (247)
T 3dv9_A 179 GFKPNEALVIENAPLGVQAGVA 200 (247)
T ss_dssp TCCGGGEEEEECSHHHHHHHHH
T ss_pred CCChhheEEEeCCHHHHHHHHH
Confidence 9999999999999999887764
No 51
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=99.34 E-value=3.7e-13 Score=115.20 Aligned_cols=81 Identities=9% Similarity=0.037 Sum_probs=61.6
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHH------HHcCCc----EEEc----cCCCCHHH-HHHHH
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE------GKIGIK----VIRH----RVKKPAGT-AEEIE 267 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~l------k~LGI~----vI~h----a~KKP~p~-le~al 267 (299)
.|++.+.|+.|++. ++++|+||+. ...++.+. +.+|+. .+.. +..||.+. ++.++
T Consensus 114 ~~~~~~~l~~l~~~--~~~~i~Sn~~--------~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~ 183 (229)
T 4dcc_A 114 PTYKLDLLLKLREK--YVVYLLSNTN--------DIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVT 183 (229)
T ss_dssp CHHHHHHHHHHTTT--SEEEEEECCC--------HHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHhc--CcEEEEECCC--------hHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHHH
Confidence 46677777788764 8999999997 55565444 555642 2221 45788874 89999
Q ss_pred HHhCCCCCcEEEEcCCccccccccee
Q 022336 268 KHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 268 k~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
+++|++|++|+||||+..||.+|+.+
T Consensus 184 ~~~g~~~~~~~~vGD~~~Di~~a~~a 209 (229)
T 4dcc_A 184 EDAGIDPKETFFIDDSEINCKVAQEL 209 (229)
T ss_dssp HHHTCCGGGEEEECSCHHHHHHHHHT
T ss_pred HHcCCCHHHeEEECCCHHHHHHHHHc
Confidence 99999999999999999999888753
No 52
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=99.34 E-value=1.8e-12 Score=110.50 Aligned_cols=82 Identities=6% Similarity=-0.038 Sum_probs=63.7
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc-----------c------C-CCCHH-H
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH-----------R------V-KKPAG-T 262 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h-----------a------~-KKP~p-~ 262 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+..++. + . .++.+ .
T Consensus 93 ~~~g~~~~l~~l~~~-g~~~~ivS~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~ 163 (232)
T 3fvv_A 93 LTVQAVDVVRGHLAA-GDLCALVTATN--------SFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVR 163 (232)
T ss_dssp CCHHHHHHHHHHHHT-TCEEEEEESSC--------HHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHH
T ss_pred cCHHHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHH
Confidence 367888888999987 99999999997 788999999999863211 0 0 12222 2
Q ss_pred HHHHHHHhC---CCCCcEEEEcCCcccccccce
Q 022336 263 AEEIEKHFG---CQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 263 le~alk~lG---i~PeEiamVGDrl~DI~gAn~ 292 (299)
+..+++.+| ++|++|+||||+..|+.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ 196 (232)
T 3fvv_A 164 VNQWLAGMGLALGDFAESYFYSDSVNDVPLLEA 196 (232)
T ss_dssp HHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHH
T ss_pred HHHHHHHcCCCcCchhheEEEeCCHhhHHHHHh
Confidence 678889999 999999999999999766544
No 53
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=99.34 E-value=7.4e-13 Score=111.63 Aligned_cols=80 Identities=16% Similarity=0.135 Sum_probs=62.4
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~ 273 (299)
.|++.+.|+.|++. ++++|+||+. ...+..+.+.+|+. .+.. ...||.+ .++.+++++|++
T Consensus 102 ~~~~~~~l~~l~~~--~~~~i~t~~~--------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~ 171 (234)
T 3u26_A 102 YPEVVEVLKSLKGK--YHVGMITDSD--------TEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVK 171 (234)
T ss_dssp CTTHHHHHHHHTTT--SEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCC
T ss_pred CcCHHHHHHHHHhC--CcEEEEECCC--------HHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCC
Confidence 45556667777663 8999999997 67788888888874 2221 3468877 489999999999
Q ss_pred CCcEEEEcCCc-ccccccce
Q 022336 274 SSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 274 PeEiamVGDrl-~DI~gAn~ 292 (299)
|+++++|||+. +||.+|+.
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~ 191 (234)
T 3u26_A 172 GEEAVYVGDNPVKDCGGSKN 191 (234)
T ss_dssp GGGEEEEESCTTTTHHHHHT
T ss_pred chhEEEEcCCcHHHHHHHHH
Confidence 99999999998 99877664
No 54
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.33 E-value=1.6e-12 Score=109.57 Aligned_cols=81 Identities=14% Similarity=0.090 Sum_probs=64.4
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhC-
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFG- 271 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lG- 271 (299)
+.|++.+.|+.|++. ++++|+||+. ...+..+.+.+|+. .+.. ...||.+ .++.+++++|
T Consensus 104 ~~~~~~~~l~~l~~~--~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~ 173 (238)
T 3ed5_A 104 LIDGAFDLISNLQQQ--FDLYIVTNGV--------SHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQ 173 (238)
T ss_dssp BCTTHHHHHHHHHTT--SEEEEEECSC--------HHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTSTT
T ss_pred CCccHHHHHHHHHhc--CeEEEEeCCC--------HHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcCC
Confidence 456777778888774 8999999987 67778888888864 2221 3568877 4899999999
Q ss_pred CCCCcEEEEcCCc-ccccccce
Q 022336 272 CQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 272 i~PeEiamVGDrl-~DI~gAn~ 292 (299)
++|++++||||+. +||.+|+.
T Consensus 174 ~~~~~~i~vGD~~~~Di~~a~~ 195 (238)
T 3ed5_A 174 FSAEHTLIIGDSLTADIKGGQL 195 (238)
T ss_dssp CCGGGEEEEESCTTTTHHHHHH
T ss_pred CChhHeEEECCCcHHHHHHHHH
Confidence 9999999999998 99887765
No 55
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=99.33 E-value=1.4e-13 Score=120.74 Aligned_cols=107 Identities=15% Similarity=0.043 Sum_probs=75.3
Q ss_pred HHHHcCCcEEEEeccCeeecCCC---------------------------------cccCchHHHHHHHHHHhCCCcEEE
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYS---------------------------------LTLWGPLSSSIEQCKSVFGHDIAV 223 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~---------------------------------~~l~Pgv~e~L~~Lke~fGikVaI 223 (299)
.+..+.+|+|+||+||||+.... ..+.|++.+.|++|++. |++++|
T Consensus 31 ~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~-G~~l~i 109 (211)
T 2b82_A 31 SLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR-GDAIFF 109 (211)
T ss_dssp HTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH-TCEEEE
T ss_pred hcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHC-CCEEEE
Confidence 34445699999999999994211 01345888999999998 999999
Q ss_pred EeCCCCCCCCCccHHHHHHHHHHcCCc-----EEEccCCCCHHH-HHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 224 FSNSAGLYEYDNDASKARKLEGKIGIK-----VIRHRVKKPAGT-AEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 224 VSNnaGs~~~d~~~e~a~~~lk~LGI~-----vI~ha~KKP~p~-le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
+||+.... . ....+.+.+.++.. .......||.+. +.++++++|+ ++||||+..||.+|+.
T Consensus 110 vTn~~~~~-~---~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~ 176 (211)
T 2b82_A 110 VTGRSPTK-T---ETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARD 176 (211)
T ss_dssp EECSCCCS-S---CCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHH
T ss_pred EcCCcHHH-H---HHHHHHHHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHH
Confidence 99997321 1 12222244445432 112234688874 8899999998 9999999999988875
No 56
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=99.32 E-value=7e-13 Score=111.00 Aligned_cols=78 Identities=10% Similarity=0.167 Sum_probs=62.0
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHHH-HHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAGT-AEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p~-le~alk~lGi 272 (299)
+.|++.+ |+.|++. ++++|+||+. ...++.+++.+|+. .+.. ...||.+. +..+++++|
T Consensus 75 ~~~~~~~-l~~l~~~--~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~- 142 (201)
T 2w43_A 75 AYEDTKY-LKEISEI--AEVYALSNGS--------INEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG- 142 (201)
T ss_dssp ECGGGGG-HHHHHHH--SEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT-
T ss_pred cCCChHH-HHHHHhC--CeEEEEeCcC--------HHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC-
Confidence 3566777 8888875 8999999997 67788888888863 2221 34688874 889999999
Q ss_pred CCCcEEEEcCCcccccccce
Q 022336 273 QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~ 292 (299)
|++++||||+..||.+|+.
T Consensus 143 -~~~~~~vGD~~~Di~~a~~ 161 (201)
T 2w43_A 143 -AKEAFLVSSNAFDVIGAKN 161 (201)
T ss_dssp -CSCCEEEESCHHHHHHHHH
T ss_pred -CCcEEEEeCCHHHhHHHHH
Confidence 9999999999999888764
No 57
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=99.32 E-value=7.4e-13 Score=113.73 Aligned_cols=82 Identities=12% Similarity=0.069 Sum_probs=61.2
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc------EEEc----cCCCCHH-HHHHHHHHh
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIRH----RVKKPAG-TAEEIEKHF 270 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~------vI~h----a~KKP~p-~le~alk~l 270 (299)
+.|++.+.++.|++. |++++|+||+. ...+...++. |+. .+.. ...||.+ .++.+++++
T Consensus 110 ~~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~~~l 179 (243)
T 3qxg_A 110 RMPGAWELLQKVKSE-GLTPMVVTGSG--------QLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKG 179 (243)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECCCC--------CHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHc-CCcEEEEeCCc--------HHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHHHHc
Confidence 456777788888887 99999999987 3444444444 542 1221 3467776 489999999
Q ss_pred CCCCCcEEEEcCCccccccccee
Q 022336 271 GCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 271 Gi~PeEiamVGDrl~DI~gAn~~ 293 (299)
|++|++|+||||+.+||.+|+.+
T Consensus 180 g~~~~~~i~vGD~~~Di~~a~~a 202 (243)
T 3qxg_A 180 GLKADEAVVIENAPLGVEAGHKA 202 (243)
T ss_dssp TCCGGGEEEEECSHHHHHHHHHT
T ss_pred CCCHHHeEEEeCCHHHHHHHHHC
Confidence 99999999999999998877643
No 58
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=99.32 E-value=1.5e-12 Score=110.53 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=64.4
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc--EEEc----cCCCCHH-HHHHHHHHhCCCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--VIRH----RVKKPAG-TAEEIEKHFGCQSS 275 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~--vI~h----a~KKP~p-~le~alk~lGi~Pe 275 (299)
.|++.+.|+.|++. ++++|+||+. ...++.+.+.+|+. .+.. ...||.+ .++.+++++|++|+
T Consensus 118 ~~~~~~~l~~l~~~--~~~~i~t~~~--------~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 187 (254)
T 3umg_A 118 WPDSVPGLTAIKAE--YIIGPLSNGN--------TSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPG 187 (254)
T ss_dssp CTTHHHHHHHHHHH--SEEEECSSSC--------HHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCGG
T ss_pred CcCHHHHHHHHHhC--CeEEEEeCCC--------HHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHcCCChH
Confidence 56777788888874 8999999987 67788888888874 1111 3568877 48999999999999
Q ss_pred cEEEEcCCcccccccce
Q 022336 276 QLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 276 EiamVGDrl~DI~gAn~ 292 (299)
+|+||||+.+||.+|+.
T Consensus 188 ~~~~iGD~~~Di~~a~~ 204 (254)
T 3umg_A 188 EVMLAAAHNGDLEAAHA 204 (254)
T ss_dssp GEEEEESCHHHHHHHHH
T ss_pred HEEEEeCChHhHHHHHH
Confidence 99999999999887764
No 59
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=99.32 E-value=5.1e-13 Score=111.79 Aligned_cols=80 Identities=10% Similarity=0.053 Sum_probs=61.4
Q ss_pred chHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHH------cCCc----EEEc----cCCCCHHH-HHHHHH
Q 022336 204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK------IGIK----VIRH----RVKKPAGT-AEEIEK 268 (299)
Q Consensus 204 Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~------LGI~----vI~h----a~KKP~p~-le~alk 268 (299)
|++.+.|+.|++ |++++|+||+. ...+..+++. +|+. .+.. +..||.+. ++.+++
T Consensus 92 ~~~~~~l~~l~~--g~~~~i~t~~~--------~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 161 (211)
T 2i6x_A 92 AEKFDYIDSLRP--DYRLFLLSNTN--------PYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIA 161 (211)
T ss_dssp HHHHHHHHHHTT--TSEEEEEECCC--------HHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHc--CCeEEEEeCCC--------HHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHHHHH
Confidence 455556666665 89999999987 6667777777 6753 2221 35788874 889999
Q ss_pred HhCCCCCcEEEEcCCccccccccee
Q 022336 269 HFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 269 ~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
++|++|++|+||||+..||.+|+.+
T Consensus 162 ~~~~~~~~~~~igD~~~Di~~a~~a 186 (211)
T 2i6x_A 162 DSGMKPEETLFIDDGPANVATAERL 186 (211)
T ss_dssp HHCCCGGGEEEECSCHHHHHHHHHT
T ss_pred HhCCChHHeEEeCCCHHHHHHHHHc
Confidence 9999999999999999998887643
No 60
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=99.31 E-value=1.8e-12 Score=112.85 Aligned_cols=80 Identities=20% Similarity=0.233 Sum_probs=64.3
Q ss_pred chHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCCC
Q 022336 204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQS 274 (299)
Q Consensus 204 Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~P 274 (299)
|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.+ .++.+++++|++|
T Consensus 117 ~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 187 (243)
T 2hsz_A 117 PNVKETLEALKAQ-GYILAVVTNKP--------TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYP 187 (243)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCG
T ss_pred CCHHHHHHHHHHC-CCEEEEEECCc--------HHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHhCcCh
Confidence 5666777788886 99999999997 66788888888864 2221 3467776 4889999999999
Q ss_pred CcEEEEcCCcccccccce
Q 022336 275 SQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 275 eEiamVGDrl~DI~gAn~ 292 (299)
++|+||||+.+||.+|+.
T Consensus 188 ~~~~~vGD~~~Di~~a~~ 205 (243)
T 2hsz_A 188 KQILFVGDSQNDIFAAHS 205 (243)
T ss_dssp GGEEEEESSHHHHHHHHH
T ss_pred hhEEEEcCCHHHHHHHHH
Confidence 999999999999887654
No 61
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.28 E-value=2.5e-12 Score=122.44 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=69.0
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc------------------cCCCCHHH-
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAGT- 262 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h------------------a~KKP~p~- 262 (299)
+.|++.+.++.|++. |++++|+||+. ...++.+.+.+|+..++. ...||.+.
T Consensus 257 ~~pg~~e~l~~Lk~~-G~~~~ivS~~~--------~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~ 327 (415)
T 3p96_A 257 LMPGARTTLRTLRRL-GYACGVVSGGF--------RRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATA 327 (415)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH
T ss_pred cCccHHHHHHHHHHC-CCEEEEEcCCc--------HHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHH
Confidence 467888899999997 99999999987 778899999999875432 01567764
Q ss_pred HHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 263 AEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 263 le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
++.+++++|++|++++||||+.+|+.+|+.+
T Consensus 328 ~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~a 358 (415)
T 3p96_A 328 LREFAQRAGVPMAQTVAVGDGANDIDMLAAA 358 (415)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred HHHHHHHcCcChhhEEEEECCHHHHHHHHHC
Confidence 8899999999999999999999998776643
No 62
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=99.28 E-value=3.5e-12 Score=105.55 Aligned_cols=81 Identities=14% Similarity=0.137 Sum_probs=62.3
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc---EEE-------c------cCCCCHH--HH
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIR-------H------RVKKPAG--TA 263 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~---vI~-------h------a~KKP~p--~l 263 (299)
+.|++.+.++.|++. |++++|+||+. ...++.+.+.+|+. ++. . ..+||.+ .+
T Consensus 83 ~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (219)
T 3kd3_A 83 LTDGIKELVQDLKNK-GFEIWIFSGGL--------SESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKL 153 (219)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHH
T ss_pred CChhHHHHHHHHHHC-CCeEEEEcCCc--------HHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHH
Confidence 456677778888887 99999999987 67888888999883 111 1 2256664 35
Q ss_pred HHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 264 EEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 264 e~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
..+.+.+|+++++++||||+.+||.+++
T Consensus 154 ~~l~~~~~~~~~~~~~vGD~~~Di~~~~ 181 (219)
T 3kd3_A 154 SAFDKAKGLIDGEVIAIGDGYTDYQLYE 181 (219)
T ss_dssp HHHHHHGGGCCSEEEEEESSHHHHHHHH
T ss_pred HHHHHHhCCCCCCEEEEECCHhHHHHHh
Confidence 6666777999999999999999988764
No 63
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=99.28 E-value=2.4e-12 Score=110.09 Aligned_cols=80 Identities=10% Similarity=0.118 Sum_probs=63.0
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc--EEEc----cCCCCHH-HHHHHHHHhCCCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--VIRH----RVKKPAG-TAEEIEKHFGCQSS 275 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~--vI~h----a~KKP~p-~le~alk~lGi~Pe 275 (299)
.|++.+.|+.+++ +++++|+||.. ...+..+.+.+|+. .+.. ...||.+ .++.+++++|++|+
T Consensus 122 ~~~~~~~l~~l~~--~~~~~i~s~~~--------~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 191 (254)
T 3umc_A 122 WPDTLAGMHALKA--DYWLAALSNGN--------TALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQ 191 (254)
T ss_dssp CTTHHHHHHHHTT--TSEEEECCSSC--------HHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGG
T ss_pred CccHHHHHHHHHh--cCeEEEEeCCC--------HHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHcCCChH
Confidence 4566677777766 48999999987 67788888888864 2221 3568877 48999999999999
Q ss_pred cEEEEcCCcccccccce
Q 022336 276 QLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 276 EiamVGDrl~DI~gAn~ 292 (299)
+|+||||+.+||.+|+.
T Consensus 192 ~~~~iGD~~~Di~~a~~ 208 (254)
T 3umc_A 192 EVMLCAAHNYDLKAARA 208 (254)
T ss_dssp GEEEEESCHHHHHHHHH
T ss_pred HEEEEcCchHhHHHHHH
Confidence 99999999999887764
No 64
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=99.28 E-value=8.1e-12 Score=107.92 Aligned_cols=47 Identities=15% Similarity=0.176 Sum_probs=38.1
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGL 230 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs 230 (299)
..||+|+||+||||. + .....++..++++.+++. |++++++||+.|.
T Consensus 5 ~~ik~i~fDlDGTLl-d-~~~~~~~~~~ai~~l~~~-G~~~~~~t~~~~~ 51 (259)
T 2ho4_A 5 RALKAVLVDLNGTLH-I-EDAAVPGAQEALKRLRAT-SVMVRFVTNTTKE 51 (259)
T ss_dssp -CCCEEEEESSSSSC-C----CCTTHHHHHHHHHTS-SCEEEEEECCSSC
T ss_pred hhCCEEEEeCcCcEE-e-CCEeCcCHHHHHHHHHHC-CCeEEEEeCCCCc
Confidence 469999999999999 3 334558888899999986 9999999999865
No 65
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=99.27 E-value=1.1e-11 Score=105.39 Aligned_cols=81 Identities=14% Similarity=0.178 Sum_probs=63.9
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc---EEE-------------c-cC-----CCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIR-------------H-RV-----KKP 259 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~---vI~-------------h-a~-----KKP 259 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. ++. . .. .||
T Consensus 87 ~~~g~~~~l~~L~~~-g~~~~i~T~~~--------~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
T 1nnl_A 87 LTPGIRELVSRLQER-NVQVFLISGGF--------RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 157 (225)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred CCccHHHHHHHHHHC-CCcEEEEeCCh--------HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCc
Confidence 567888889999997 99999999997 67888899999985 221 0 00 134
Q ss_pred HH-HHHHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 260 AG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 260 ~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
.| .++.+++.+|+ ++|+||||+..||.+|+.+
T Consensus 158 Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~a 190 (225)
T 1nnl_A 158 KGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPA 190 (225)
T ss_dssp HHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTS
T ss_pred hHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhC
Confidence 44 47889999998 8999999999999888753
No 66
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=99.27 E-value=5.2e-12 Score=105.89 Aligned_cols=81 Identities=12% Similarity=0.130 Sum_probs=61.9
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC--cEEEc----cCCCCHHH-HHHH---HHHhC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI--KVIRH----RVKKPAGT-AEEI---EKHFG 271 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI--~vI~h----a~KKP~p~-le~a---lk~lG 271 (299)
+.|++.+.|+.|++ |++++|+||+. ...+..+.+.++. ..+.. ...||.+. ++.+ ++++|
T Consensus 100 ~~~~~~~~l~~l~~--~~~~~i~tn~~--------~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~~lg 169 (240)
T 3smv_A 100 AFPDTVEALQYLKK--HYKLVILSNID--------RNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAG 169 (240)
T ss_dssp BCTTHHHHHHHHHH--HSEEEEEESSC--------HHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHHHTT
T ss_pred CCCcHHHHHHHHHh--CCeEEEEeCCC--------hhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHHhcC
Confidence 45677777888877 69999999987 6667767666663 23322 45788875 6667 88999
Q ss_pred CCCCcEEEEcCCc-ccccccce
Q 022336 272 CQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 272 i~PeEiamVGDrl-~DI~gAn~ 292 (299)
++|++|+||||+. +||.+|+.
T Consensus 170 i~~~~~~~vGD~~~~Di~~a~~ 191 (240)
T 3smv_A 170 IEKKDILHTAESLYHDHIPAND 191 (240)
T ss_dssp CCGGGEEEEESCTTTTHHHHHH
T ss_pred CCchhEEEECCCchhhhHHHHH
Confidence 9999999999997 99887764
No 67
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.26 E-value=7.7e-12 Score=109.84 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=41.6
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY 231 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~ 231 (299)
..+++|+||+||||... ..+.++..++++++++. |++++++||++|..
T Consensus 15 ~~~~~v~~DlDGTLl~~--~~~~~~~~~~l~~l~~~-G~~~~~aTn~~gr~ 62 (271)
T 1vjr_A 15 DKIELFILDMDGTFYLD--DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLG 62 (271)
T ss_dssp GGCCEEEECCBTTTEET--TEECTTHHHHHHHHHHT-TCEEEEEESCTTSC
T ss_pred cCCCEEEEcCcCcEEeC--CEECcCHHHHHHHHHHc-CCeEEEEECCCCCC
Confidence 56899999999999943 45779999999999997 99999999998753
No 68
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=99.26 E-value=3.2e-12 Score=107.73 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=57.5
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.|+.|++. ++++|+||+.. . .+.+|+. .+.. +..||.+ .++.+++++|+
T Consensus 106 ~~~~~~~~l~~l~~~--~~~~i~t~~~~--------~-----l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 170 (230)
T 3vay_A 106 IFPEVQPTLEILAKT--FTLGVITNGNA--------D-----VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKV 170 (230)
T ss_dssp BCTTHHHHHHHHHTT--SEEEEEESSCC--------C-----GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTC
T ss_pred cCcCHHHHHHHHHhC--CeEEEEECCch--------h-----hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCC
Confidence 456777788888774 89999999862 1 3455653 2221 3568887 48999999999
Q ss_pred CCCcEEEEcCCc-ccccccce
Q 022336 273 QSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl-~DI~gAn~ 292 (299)
+|++++||||+. +||.+|+.
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~ 191 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQ 191 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHH
T ss_pred CchheEEEeCChHHHHHHHHH
Confidence 999999999998 99887764
No 69
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=99.26 E-value=7.3e-12 Score=110.81 Aligned_cols=47 Identities=19% Similarity=0.208 Sum_probs=40.7
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY 231 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~ 231 (299)
.||+|+||+||||. ..+..+ |+..++|++++++ |++++++||++|..
T Consensus 4 ~~kli~~DlDGTLl-~~~~~i-~~~~eal~~l~~~-G~~vvl~Tn~~gr~ 50 (264)
T 3epr_A 4 AYKGYLIDLDGTIY-KGKSRI-PAGERFIERLQEK-GIPYMLVTNNTTRT 50 (264)
T ss_dssp CCCEEEECCBTTTE-ETTEEC-HHHHHHHHHHHHH-TCCEEEEECCCSSC
T ss_pred CCCEEEEeCCCceE-eCCEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 58999999999999 444455 8999999999998 99999999987653
No 70
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.24 E-value=7.1e-12 Score=104.07 Aligned_cols=81 Identities=9% Similarity=0.028 Sum_probs=62.4
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~ 273 (299)
.|++.+.++.+++. |++++|+||+. ...+....+.+|+. .+.. ...||.+ .+..+++++|++
T Consensus 91 ~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 161 (225)
T 3d6j_A 91 FPDTLPTLTHLKKQ-GIRIGIISTKY--------RFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKAC 161 (225)
T ss_dssp CTTHHHHHHHHHHH-TCEEEEECSSC--------HHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCC
T ss_pred CcCHHHHHHHHHHC-CCeEEEEECCC--------HHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCC
Confidence 35566667778876 99999999987 66777788888763 2221 2357765 488999999999
Q ss_pred CCcEEEEcCCcccccccce
Q 022336 274 SSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~ 292 (299)
++++++|||+.+||.+|+.
T Consensus 162 ~~~~i~iGD~~nDi~~~~~ 180 (225)
T 3d6j_A 162 PEEVLYIGDSTVDAGTAAA 180 (225)
T ss_dssp GGGEEEEESSHHHHHHHHH
T ss_pred hHHeEEEcCCHHHHHHHHH
Confidence 9999999999999776654
No 71
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=99.24 E-value=5.7e-12 Score=105.82 Aligned_cols=81 Identities=6% Similarity=-0.038 Sum_probs=63.5
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEE-------ccC-----CCCHH-HHHHHHH
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-------HRV-----KKPAG-TAEEIEK 268 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~-------ha~-----KKP~p-~le~alk 268 (299)
+.|++.+.|+.|++. ++++|+||+. ...++.+++.+|+..++ ... +||.| .+..+++
T Consensus 70 ~~~g~~~~l~~l~~~--~~~~i~s~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~ 139 (206)
T 1rku_A 70 PLEGAVEFVDWLRER--FQVVILSDTF--------YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVI 139 (206)
T ss_dssp CCTTHHHHHHHHHTT--SEEEEEEEEE--------HHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHH
T ss_pred CCccHHHHHHHHHhc--CcEEEEECCh--------HHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHH
Confidence 357777888888874 8999999987 67888899999875222 111 23665 4788999
Q ss_pred HhCCCCCcEEEEcCCcccccccce
Q 022336 269 HFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 269 ~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
++|++|++|+||||+..||.+|+.
T Consensus 140 ~l~~~~~~~~~iGD~~~Di~~a~~ 163 (206)
T 1rku_A 140 AFKSLYYRVIAAGDSYNDTTMLSE 163 (206)
T ss_dssp HHHHTTCEEEEEECSSTTHHHHHH
T ss_pred HHHhcCCEEEEEeCChhhHHHHHh
Confidence 999999999999999999887764
No 72
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=99.24 E-value=4.4e-12 Score=109.33 Aligned_cols=83 Identities=12% Similarity=0.035 Sum_probs=60.6
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHH-HHcCC----cEEE--c----cCCCCHH-HHHHHHHH
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE-GKIGI----KVIR--H----RVKKPAG-TAEEIEKH 269 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~l-k~LGI----~vI~--h----a~KKP~p-~le~alk~ 269 (299)
+.|++.+.|+.|++. |++++|+||+. ...+.... +.+|+ ..+. . ...||.+ .++.++++
T Consensus 113 ~~~~~~~~l~~l~~~-g~~~~i~sn~~--------~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 183 (250)
T 3l5k_A 113 LMPGAEKLIIHLRKH-GIPFALATSSR--------SASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKR 183 (250)
T ss_dssp BCTTHHHHHHHHHHT-TCCEEEECSCC--------HHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhC-CCcEEEEeCCC--------HHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHH
Confidence 456777888889887 99999999997 44444333 22232 2221 1 2467876 48999999
Q ss_pred hCCCC--CcEEEEcCCccccccccee
Q 022336 270 FGCQS--SQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 270 lGi~P--eEiamVGDrl~DI~gAn~~ 293 (299)
+|++| ++|+||||+..||.+|+.+
T Consensus 184 lgi~~~~~~~i~iGD~~~Di~~a~~a 209 (250)
T 3l5k_A 184 FSPPPAMEKCLVFEDAPNGVEAALAA 209 (250)
T ss_dssp SSSCCCGGGEEEEESSHHHHHHHHHT
T ss_pred cCCCCCcceEEEEeCCHHHHHHHHHc
Confidence 99998 9999999999998887643
No 73
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=99.23 E-value=1.5e-11 Score=111.19 Aligned_cols=67 Identities=13% Similarity=0.182 Sum_probs=54.5
Q ss_pred CCcEEEEeCCCCCCCCCccHHHHHHHHHHc--C-------------CcEEEc--c-CCCCHHH-HHHHHHHhCCCCCcEE
Q 022336 218 GHDIAVFSNSAGLYEYDNDASKARKLEGKI--G-------------IKVIRH--R-VKKPAGT-AEEIEKHFGCQSSQLI 278 (299)
Q Consensus 218 GikVaIVSNnaGs~~~d~~~e~a~~~lk~L--G-------------I~vI~h--a-~KKP~p~-le~alk~lGi~PeEia 278 (299)
|++++|+||+. ...++.+++.+ | +..++. . ..||.|. ++.+++++|++|++|+
T Consensus 137 g~~l~i~Tn~~--------~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p~~~~~a~~~lg~~p~~~l 208 (253)
T 2g80_A 137 KKRVFIYSSGS--------VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTETQSYANILRDIGAKASEVL 208 (253)
T ss_dssp CSCEEEECSSC--------HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCEEEEEeCCC--------HHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCHHHHHHHHHHcCCCcccEE
Confidence 89999999997 66777777766 5 443332 1 3699985 8999999999999999
Q ss_pred EEcCCcccccccce
Q 022336 279 MVDMCRIVIFPGPV 292 (299)
Q Consensus 279 mVGDrl~DI~gAn~ 292 (299)
||||+..||.||+.
T Consensus 209 ~vgDs~~di~aA~~ 222 (253)
T 2g80_A 209 FLSDNPLELDAAAG 222 (253)
T ss_dssp EEESCHHHHHHHHT
T ss_pred EEcCCHHHHHHHHH
Confidence 99999999988864
No 74
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=99.23 E-value=3.2e-12 Score=107.04 Aligned_cols=80 Identities=9% Similarity=0.023 Sum_probs=61.9
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi~ 273 (299)
.|++.+.|+.|++. ++++|+||+. ...++.+++.+|+. .+.. +..||.+ .++.+++++|++
T Consensus 85 ~~~~~~~l~~l~~~--~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 154 (209)
T 2hdo_A 85 YPGITSLFEQLPSE--LRLGIVTSQR--------RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA 154 (209)
T ss_dssp CTTHHHHHHHSCTT--SEEEEECSSC--------HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHhc--CcEEEEeCCC--------HHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 45566666666663 8999999987 67788888888863 2221 3468876 488999999999
Q ss_pred CCcEEEEcCCcccccccce
Q 022336 274 SSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 274 PeEiamVGDrl~DI~gAn~ 292 (299)
|++++||||+.+||.+|+.
T Consensus 155 ~~~~i~vGD~~~Di~~a~~ 173 (209)
T 2hdo_A 155 PQNALFIGDSVSDEQTAQA 173 (209)
T ss_dssp GGGEEEEESSHHHHHHHHH
T ss_pred cccEEEECCChhhHHHHHH
Confidence 9999999999999887764
No 75
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=99.21 E-value=1.8e-11 Score=101.26 Aligned_cols=82 Identities=20% Similarity=0.122 Sum_probs=61.6
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc------c-----------C-CCCHH-H
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------R-----------V-KKPAG-T 262 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h------a-----------~-KKP~p-~ 262 (299)
+.|++.+.|+.+++. |++++|+||+. ...++.+.+.+|+..++. . . .++.+ .
T Consensus 77 l~~~~~~~l~~l~~~-g~~~~i~T~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 147 (211)
T 1l7m_A 77 PTEGAEETIKELKNR-GYVVAVVSGGF--------DIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 147 (211)
T ss_dssp BCTTHHHHHHHHHHT-TEEEEEEEEEE--------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred CCccHHHHHHHHHHC-CCEEEEEcCCc--------HHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHH
Confidence 356777788888886 99999999986 556677778888753221 0 1 12333 4
Q ss_pred HHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 263 AEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 263 le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
+.++++++|+++++|+||||+.+||.+|+.
T Consensus 148 l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ 177 (211)
T 1l7m_A 148 LEKIAKIEGINLEDTVAVGDGANDISMFKK 177 (211)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEEecChhHHHHHHH
Confidence 889999999999999999999999877654
No 76
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=99.19 E-value=3.8e-11 Score=108.84 Aligned_cols=58 Identities=21% Similarity=0.170 Sum_probs=45.8
Q ss_pred CCCCHHHHHH--cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCC
Q 022336 171 RYIDWAELQR--RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY 231 (299)
Q Consensus 171 ~~Id~~~Lk~--~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~ 231 (299)
..++.+.+++ ..||+|+||+||||.. ...+.|+..+++++|++. |++++++||++|..
T Consensus 7 ~~~~~~~~~~~~~~~k~i~~D~DGTL~~--~~~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~~~ 66 (306)
T 2oyc_A 7 ERLRGAALRDVLGRAQGVLFDCDGVLWN--GERAVPGAPELLERLARA-GKAALFVSNNSRRA 66 (306)
T ss_dssp EECCHHHHHHHHHHCSEEEECSBTTTEE--TTEECTTHHHHHHHHHHT-TCEEEEEECCCSSC
T ss_pred hcCCHHHHHHHHhhCCEEEECCCCcEec--CCccCcCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 3344444432 4799999999999993 345778999999999997 99999999987754
No 77
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=99.18 E-value=3.1e-11 Score=110.03 Aligned_cols=102 Identities=15% Similarity=0.041 Sum_probs=72.3
Q ss_pred HcCCcEEEEeccCeeecCC------------------------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCc
Q 022336 180 RRGFKGVVFDKDNTLTAPY------------------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN 235 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~------------------------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~ 235 (299)
..++++||||+||||+... ...+.|++.++|+.|++. |++++|+||++. .
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-Gi~i~iaTnr~~-----~ 129 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESK-GVDIYYISNRKT-----N 129 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHT-TCEEEEEEEEEG-----G
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCEEEEEcCCch-----h
Confidence 4679999999999999331 156889999999999997 999999999862 1
Q ss_pred cHHHHHHHHHHcCCcE------EEcc--CCCCHHHHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 236 DASKARKLEGKIGIKV------IRHR--VKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 236 ~~e~a~~~lk~LGI~v------I~ha--~KKP~p~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
....+...++.+|+.. +..+ ..||.+. ..++ ..| .+.++||||++.||.+|.
T Consensus 130 ~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~~-~~~~-~~~--~~~~l~VGDs~~Di~aA~ 189 (258)
T 2i33_A 130 QLDATIKNLERVGAPQATKEHILLQDPKEKGKEKR-RELV-SQT--HDIVLFFGDNLSDFTGFD 189 (258)
T ss_dssp GHHHHHHHHHHHTCSSCSTTTEEEECTTCCSSHHH-HHHH-HHH--EEEEEEEESSGGGSTTCS
T ss_pred HHHHHHHHHHHcCCCcCCCceEEECCCCCCCcHHH-HHHH-HhC--CCceEEeCCCHHHhcccc
Confidence 1345566677778761 1111 2456542 2222 233 345999999999999983
No 78
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=99.18 E-value=2.6e-11 Score=99.46 Aligned_cols=79 Identities=15% Similarity=0.170 Sum_probs=60.0
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhCC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lGi 272 (299)
+.|++.+.++.+++. |++++|+||+. ..+..+.+.+|+. .+.. ...||.+ .++.+++++|+
T Consensus 83 ~~~~~~~~l~~l~~~-g~~~~i~t~~~---------~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~ 152 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQ-GGRHFLVSHRN---------DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI 152 (190)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECSSC---------THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHC-CCcEEEEECCc---------HHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCC
Confidence 346677778888886 99999999975 2466777788863 1221 2457766 48999999999
Q ss_pred CCCcEEEEcCCcccccccce
Q 022336 273 QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl~DI~gAn~ 292 (299)
+ ++++|||+.+||.+|+.
T Consensus 153 ~--~~~~iGD~~~Di~~a~~ 170 (190)
T 2fi1_A 153 S--SGLVIGDRPIDIEAGQA 170 (190)
T ss_dssp S--SEEEEESSHHHHHHHHH
T ss_pred C--eEEEEcCCHHHHHHHHH
Confidence 8 99999999999877764
No 79
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.18 E-value=5.6e-11 Score=104.38 Aligned_cols=45 Identities=24% Similarity=0.310 Sum_probs=39.0
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAG 229 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaG 229 (299)
.||+|+||+||||.. ...+.|+..++|+++++. |++++|+||+++
T Consensus 7 ~~kli~~DlDGTLl~--~~~~~~~~~~ai~~l~~~-Gi~v~l~Tgr~~ 51 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGK--SVTPIPEGVEGVKKLKEL-GKKIIFVSNNST 51 (268)
T ss_dssp CCSEEEEECBTTTEE--TTEECHHHHHHHHHHHHT-TCEEEEEECCSS
T ss_pred cCCEEEEcCcCcEEC--CCEeCcCHHHHHHHHHHc-CCeEEEEeCcCC
Confidence 599999999999993 334678999999999997 999999999653
No 80
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=99.17 E-value=5.6e-11 Score=104.18 Aligned_cols=47 Identities=13% Similarity=0.094 Sum_probs=39.2
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY 231 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~ 231 (299)
.+|+|+||+||||. +.. ...+++.++++.+++. |++++++||+.+..
T Consensus 4 ~~k~v~fDlDGTL~-~~~-~~~~~~~~~l~~l~~~-g~~~~~~t~~~~~~ 50 (264)
T 1yv9_A 4 DYQGYLIDLDGTIY-LGK-EPIPAGKRFVERLQEK-DLPFLFVTNNTTKS 50 (264)
T ss_dssp SCCEEEECCBTTTE-ETT-EECHHHHHHHHHHHHT-TCCEEEEECCCSSC
T ss_pred cCCEEEEeCCCeEE-eCC-EECcCHHHHHHHHHHC-CCeEEEEeCCCCCC
Confidence 58999999999999 333 3447889999999987 99999999998643
No 81
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=99.17 E-value=1e-11 Score=107.91 Aligned_cols=81 Identities=9% Similarity=0.011 Sum_probs=62.2
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC---c-EEEc---cC--------CCCHHH-HH-
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI---K-VIRH---RV--------KKPAGT-AE- 264 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI---~-vI~h---a~--------KKP~p~-le- 264 (299)
+.|++.+.|+.|++. |++++|+||+. ...++.+++ |+ . ++.. .. .||.+. +.
T Consensus 78 ~~pg~~~~l~~L~~~-g~~~~ivS~~~--------~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~~~ 146 (236)
T 2fea_A 78 IREGFREFVAFINEH-EIPFYVISGGM--------DFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSN 146 (236)
T ss_dssp BCTTHHHHHHHHHHH-TCCEEEEEEEE--------HHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCS
T ss_pred CCccHHHHHHHHHhC-CCeEEEEeCCc--------HHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCcccccc
Confidence 467888889999997 99999999997 566777766 54 2 2211 11 578765 33
Q ss_pred -------HHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 265 -------EIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 265 -------~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
.+++++|++|++++||||+..||.+|+.+
T Consensus 147 ~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~a 182 (236)
T 2fea_A 147 QCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLS 182 (236)
T ss_dssp CCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTC
T ss_pred ccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhC
Confidence 88999999999999999999998887653
No 82
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.16 E-value=2.5e-11 Score=106.75 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=40.0
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGL 230 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs 230 (299)
.||+|+||+||||.. ...+.|+..++|++++++ |++++|+||++|.
T Consensus 5 ~~kli~~DlDGTLl~--~~~~~~~~~~ai~~l~~~-Gi~v~laTgrs~r 50 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYN--GTEKIEEACEFVRTLKDR-GVPYLFVTNNSSR 50 (266)
T ss_dssp CCSEEEEECSSSTTC--HHHHHHHHHHHHHHHHHT-TCCEEEEESCCSS
T ss_pred cCCEEEEeCcCceEe--CCEeCccHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 599999999999983 356678899999999997 9999999997654
No 83
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=99.15 E-value=3e-11 Score=104.82 Aligned_cols=79 Identities=10% Similarity=0.086 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc-E----EEc----cCCCCHH-HHHHHHHHhCCCC
Q 022336 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-V----IRH----RVKKPAG-TAEEIEKHFGCQS 274 (299)
Q Consensus 205 gv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~-v----I~h----a~KKP~p-~le~alk~lGi~P 274 (299)
++.+.++.+++. |++++|+||+. ...+..+.+.+|+. + +.. ...||.+ .+..+++++|+++
T Consensus 107 ~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 177 (267)
T 1swv_A 107 GVKEVIASLRER-GIKIGSTTGYT--------REMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYP 177 (267)
T ss_dssp THHHHHHHHHHT-TCEEEEBCSSC--------HHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCS
T ss_pred cHHHHHHHHHHc-CCeEEEEcCCC--------HHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHHhCCCC
Confidence 334445567665 89999999987 56666666665532 1 111 2356665 4889999999999
Q ss_pred -CcEEEEcCCcccccccce
Q 022336 275 -SQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 275 -eEiamVGDrl~DI~gAn~ 292 (299)
++|++|||+.+||.+|+.
T Consensus 178 ~~~~i~iGD~~nDi~~a~~ 196 (267)
T 1swv_A 178 MNHMIKVGDTVSDMKEGRN 196 (267)
T ss_dssp GGGEEEEESSHHHHHHHHH
T ss_pred CcCEEEEeCCHHHHHHHHH
Confidence 999999999999877654
No 84
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=99.13 E-value=1.5e-10 Score=99.60 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=40.7
Q ss_pred CCcEEEEeccCeeecCC--CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCC
Q 022336 182 GFKGVVFDKDNTLTAPY--SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY 231 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~--~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~ 231 (299)
.||+|+||+||||.... ...+.++..++++.+++. |+++.++||..|..
T Consensus 11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~-G~~~~~~t~~~gr~ 61 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRS-RLKVRFCTNESAAS 61 (271)
T ss_dssp TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHS-SSEEEEECCCCSSC
T ss_pred cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHC-CCcEEEEECCCCCC
Confidence 58999999999999432 445778888889999886 99999999888753
No 85
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.12 E-value=1.6e-10 Score=101.83 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=50.7
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
-+|.|++|+||||. +.+..+.++..++|++|++. |++++|+|++. ...+..+.+.+|+.
T Consensus 4 m~kli~~DlDGTLl-~~~~~i~~~~~~~l~~l~~~-g~~~~i~TGr~--------~~~~~~~~~~l~~~ 62 (227)
T 1l6r_A 4 MIRLAAIDVDGNLT-DRDRLISTKAIESIRSAEKK-GLTVSLLSGNV--------IPVVYALKIFLGIN 62 (227)
T ss_dssp CCCEEEEEHHHHSB-CTTSCBCHHHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHTCC
T ss_pred ceEEEEEECCCCCc-CCCCcCCHHHHHHHHHHHHC-CCEEEEECCCC--------cHHHHHHHHHhCCC
Confidence 47999999999999 44567899999999999987 99999999997 67777787877763
No 86
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=99.08 E-value=8.2e-11 Score=104.41 Aligned_cols=80 Identities=15% Similarity=0.113 Sum_probs=60.7
Q ss_pred chHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE---EEc----cCCCCHH-HHHHHHHHhCC--
Q 022336 204 GPLSSSIEQCKSVF-GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV---IRH----RVKKPAG-TAEEIEKHFGC-- 272 (299)
Q Consensus 204 Pgv~e~L~~Lke~f-GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v---I~h----a~KKP~p-~le~alk~lGi-- 272 (299)
|++.+.|+.+++ . |++++|+||+. ...+..+++.+|+.. +.. ...||.+ .++.+++++|+
T Consensus 117 ~g~~~~L~~l~~-~~g~~l~i~T~~~--------~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~ 187 (275)
T 2qlt_A 117 PGAVKLCNALNA-LPKEKWAVATSGT--------RDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPI 187 (275)
T ss_dssp TTHHHHHHHHHT-SCGGGEEEECSSC--------HHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHh-ccCCeEEEEeCCC--------HHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHHcCCCc
Confidence 445555666665 4 78999999987 667788888887642 221 2457776 48899999999
Q ss_pred -----CCCcEEEEcCCcccccccce
Q 022336 273 -----QSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 273 -----~PeEiamVGDrl~DI~gAn~ 292 (299)
+|++|++|||+.+||.+|+.
T Consensus 188 ~~~~~~~~~~i~~GDs~nDi~~a~~ 212 (275)
T 2qlt_A 188 NEQDPSKSKVVVFEDAPAGIAAGKA 212 (275)
T ss_dssp CSSCGGGSCEEEEESSHHHHHHHHH
T ss_pred cccCCCcceEEEEeCCHHHHHHHHH
Confidence 99999999999999877764
No 87
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=99.07 E-value=9.2e-11 Score=108.01 Aligned_cols=82 Identities=9% Similarity=0.089 Sum_probs=67.4
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc------------------cCCCCHH-H
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-T 262 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h------------------a~KKP~p-~ 262 (299)
+.|++.+.++.|++. |++++|+||+. ...++.+.+.+|+..++. ...||.+ .
T Consensus 179 ~~pg~~~~l~~L~~~-g~~~~ivS~~~--------~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~ 249 (335)
T 3n28_A 179 LMPELPELVATLHAF-GWKVAIASGGF--------TYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADI 249 (335)
T ss_dssp CCTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHH
T ss_pred cCcCHHHHHHHHHHC-CCEEEEEeCCc--------HHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHH
Confidence 567888889999997 99999999987 678888999999864321 1236666 4
Q ss_pred HHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 263 AEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 263 le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
++.+++++|+++++++||||+.+||.+|+.
T Consensus 250 ~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~ 279 (335)
T 3n28_A 250 LLTLAQQYDVEIHNTVAVGDGANDLVMMAA 279 (335)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHH
Confidence 899999999999999999999999877654
No 88
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.05 E-value=6.3e-10 Score=100.49 Aligned_cols=104 Identities=13% Similarity=0.167 Sum_probs=84.8
Q ss_pred HHHHcCCcEEEEeccCeeec--CCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc
Q 022336 177 ELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~--p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h 254 (299)
.+...|.+.|.+|.|+++.. .....+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+..++.
T Consensus 137 ~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~T~~~--------~~~~~~~l~~~gl~~~f~ 207 (287)
T 3a1c_A 137 KLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDN--------WRSAEAISRELNLDLVIA 207 (287)
T ss_dssp HHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHTCSEEEC
T ss_pred HHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHC-CCeEEEEeCCC--------HHHHHHHHHHhCCceeee
Confidence 45568999999999999763 12456899999999999997 99999999997 778889999999976654
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 255 RVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 255 a~KKP~p~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
.. .|.+ ...+++.++.. ++|+||||+.+||.+|+.
T Consensus 208 ~i-~~~~-K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ 242 (287)
T 3a1c_A 208 EV-LPHQ-KSEEVKKLQAK-EVVAFVGDGINDAPALAQ 242 (287)
T ss_dssp SC-CTTC-HHHHHHHHTTT-CCEEEEECTTTCHHHHHH
T ss_pred ec-ChHH-HHHHHHHHhcC-CeEEEEECCHHHHHHHHH
Confidence 33 2322 35788999999 999999999999887764
No 89
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.05 E-value=5.8e-10 Score=97.30 Aligned_cols=44 Identities=20% Similarity=0.287 Sum_probs=38.8
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+|+|+||+||||+ +....+.+...++|+++++. |++++|+|+.+
T Consensus 3 ~kli~~DlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~v~i~TGR~ 46 (231)
T 1wr8_A 3 IKAISIDIDGTIT-YPNRMIHEKALEAIRRAESL-GIPIMLVTGNT 46 (231)
T ss_dssp CCEEEEESTTTTB-CTTSCBCHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred eeEEEEECCCCCC-CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCC
Confidence 7999999999999 55567889999999999987 99999999875
No 90
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=99.05 E-value=1e-10 Score=101.10 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=70.1
Q ss_pred CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc---EEEc----cCCCCHH-HHHHHHHHh
Q 022336 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIRH----RVKKPAG-TAEEIEKHF 270 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~---vI~h----a~KKP~p-~le~alk~l 270 (299)
...+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+. .+.. ...||.| .+..+++++
T Consensus 108 ~~~~~~g~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l 178 (240)
T 2hi0_A 108 KTGPFPGILDLMKNLRQK-GVKLAVVSNKP--------NEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVL 178 (240)
T ss_dssp SCEECTTHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHH
T ss_pred cCCcCCCHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHc
Confidence 345679999999999987 99999999987 66778888888764 2221 3467877 489999999
Q ss_pred CCCCCcEEEEcCCccccccccee
Q 022336 271 GCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 271 Gi~PeEiamVGDrl~DI~gAn~~ 293 (299)
|++|++|+||||+.+||.+|+.+
T Consensus 179 ~~~~~~~~~vGDs~~Di~~a~~a 201 (240)
T 2hi0_A 179 GVPRDKCVYIGDSEIDIQTARNS 201 (240)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHT
T ss_pred CCCHHHeEEEcCCHHHHHHHHHC
Confidence 99999999999999998887653
No 91
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.03 E-value=5.8e-10 Score=97.09 Aligned_cols=78 Identities=12% Similarity=0.054 Sum_probs=57.9
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHH--HHHHHHHHhCCCCCcEE
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG--TAEEIEKHFGCQSSQLI 278 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p--~le~alk~lGi~PeEia 278 (299)
.+.|++.+.|+.|++. |++++|+||+. ...++.+++.+|+..++...-.... .++...+ +.+++
T Consensus 144 ~~~~~~~~~l~~l~~~-g~~~~i~T~~~--------~~~~~~~~~~~gl~~~f~~~~~~~k~~~~k~~~~-----~~~~~ 209 (280)
T 3skx_A 144 RIRPESREAISKLKAI-GIKCMMLTGDN--------RFVAKWVAEELGLDDYFAEVLPHEKAEKVKEVQQ-----KYVTA 209 (280)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHTCSEEECSCCGGGHHHHHHHHHT-----TSCEE
T ss_pred CCCHhHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHHcCChhHhHhcCHHHHHHHHHHHHh-----cCCEE
Confidence 3558899999999997 99999999997 7788999999999765543211111 2333333 33899
Q ss_pred EEcCCcccccccce
Q 022336 279 MVDMCRIVIFPGPV 292 (299)
Q Consensus 279 mVGDrl~DI~gAn~ 292 (299)
||||+.+|+.+|+.
T Consensus 210 ~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 210 MVGDGVNDAPALAQ 223 (280)
T ss_dssp EEECTTTTHHHHHH
T ss_pred EEeCCchhHHHHHh
Confidence 99999999877654
No 92
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=99.02 E-value=7.2e-10 Score=93.36 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=36.7
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGL 230 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs 230 (299)
.+|+|+||+||||. +....+. +..++++.+++. |+++.++||..|.
T Consensus 2 ~~k~i~fDlDGTLl-~~~~~~~-~~~~~~~~l~~~-g~~~~~~t~~~g~ 47 (250)
T 2c4n_A 2 TIKNVICDIDGVLM-HDNVAVP-GAAEFLHGIMDK-GLPLVLLTNYPSQ 47 (250)
T ss_dssp CCCEEEEECBTTTE-ETTEECT-THHHHHHHHHHT-TCCEEEEESCCSC
T ss_pred CccEEEEcCcceEE-eCCEeCc-CHHHHHHHHHHc-CCcEEEEECCCCC
Confidence 48999999999999 3333344 448889999886 9999999988765
No 93
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=99.01 E-value=7.9e-11 Score=98.81 Aligned_cols=67 Identities=19% Similarity=0.231 Sum_probs=52.1
Q ss_pred CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE-----EEc----cCC--CCHH-HHHHHHHHhCCCCCcEEEEcCCcc
Q 022336 218 GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IRH----RVK--KPAG-TAEEIEKHFGCQSSQLIMVDMCRI 285 (299)
Q Consensus 218 GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v-----I~h----a~K--KP~p-~le~alk~lGi~PeEiamVGDrl~ 285 (299)
..+++|+||.. ...+..+++.+|+.. +.. ... ||.+ .++.+++++|++|+++++|||+.+
T Consensus 100 ~~~~~i~s~~~--------~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~ 171 (229)
T 2fdr_A 100 TTPRCICSNSS--------SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVH 171 (229)
T ss_dssp CSCEEEEESSC--------HHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHH
T ss_pred CCCEEEEECCC--------hhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHH
Confidence 34899999987 667777888887642 211 335 7776 589999999999999999999999
Q ss_pred cccccce
Q 022336 286 VIFPGPV 292 (299)
Q Consensus 286 DI~gAn~ 292 (299)
||.+|+.
T Consensus 172 Di~~a~~ 178 (229)
T 2fdr_A 172 GIHGARA 178 (229)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877654
No 94
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=99.00 E-value=7.3e-11 Score=101.70 Aligned_cols=78 Identities=9% Similarity=0.035 Sum_probs=56.0
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEE-----EccCCCCHHHHHHHHHHhCCCCCc
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI-----RHRVKKPAGTAEEIEKHFGCQSSQ 276 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI-----~ha~KKP~p~le~alk~lGi~PeE 276 (299)
+.|++.+.|+.|++. | +++|+||+. ...++.+++.+|+..+ .....|| ..++.+++ |++|++
T Consensus 97 ~~~g~~~~l~~l~~~-g-~~~i~Tn~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~K~-~~~~~~~~--~~~~~~ 163 (231)
T 2p11_A 97 VYPGALNALRHLGAR-G-PTVILSDGD--------VVFQPRKIARSGLWDEVEGRVLIYIHKE-LMLDQVME--CYPARH 163 (231)
T ss_dssp BCTTHHHHHHHHHTT-S-CEEEEEECC--------SSHHHHHHHHTTHHHHTTTCEEEESSGG-GCHHHHHH--HSCCSE
T ss_pred cCccHHHHHHHHHhC-C-CEEEEeCCC--------HHHHHHHHHHcCcHHhcCeeEEecCChH-HHHHHHHh--cCCCce
Confidence 457888889999987 8 999999997 4567777777775311 1122343 23555555 899999
Q ss_pred EEEEcCCcc---cccccce
Q 022336 277 LIMVDMCRI---VIFPGPV 292 (299)
Q Consensus 277 iamVGDrl~---DI~gAn~ 292 (299)
|+||||+.. ||.+|+.
T Consensus 164 ~~~vgDs~~d~~di~~A~~ 182 (231)
T 2p11_A 164 YVMVDDKLRILAAMKKAWG 182 (231)
T ss_dssp EEEECSCHHHHHHHHHHHG
T ss_pred EEEEcCccchhhhhHHHHH
Confidence 999999999 7766543
No 95
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=99.00 E-value=6.2e-10 Score=99.18 Aligned_cols=47 Identities=23% Similarity=0.364 Sum_probs=40.0
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGL 230 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs 230 (299)
..||+|+||+||||+. + ..+.++..++|+++++. |++++++||+.|.
T Consensus 12 ~~~k~i~~D~DGtL~~-~-~~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~r 58 (284)
T 2hx1_A 12 PKYKCIFFDAFGVLKT-Y-NGLLPGIENTFDYLKAQ-GQDYYIVTNDASR 58 (284)
T ss_dssp GGCSEEEECSBTTTEE-T-TEECTTHHHHHHHHHHT-TCEEEEEECCCSS
T ss_pred hcCCEEEEcCcCCcCc-C-CeeChhHHHHHHHHHHC-CCEEEEEeCCCCc
Confidence 4699999999999993 3 34678999999999997 9999999996553
No 96
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.98 E-value=1.4e-09 Score=96.49 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=39.4
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.+|+|+||+||||. +....+.+...++|+++++. |+.++|+|+.+
T Consensus 4 M~~kli~fDlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~ 49 (290)
T 3dnp_A 4 MSKQLLALNIDGALL-RSNGKIHQATKDAIEYVKKK-GIYVTLVTNRH 49 (290)
T ss_dssp --CCEEEECCCCCCS-CTTSCCCHHHHHHHHHHHHT-TCEEEEBCSSC
T ss_pred CcceEEEEcCCCCCC-CCCCccCHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 458999999999999 55667899999999999987 99999998875
No 97
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=98.97 E-value=2.3e-09 Score=94.58 Aligned_cols=46 Identities=20% Similarity=0.207 Sum_probs=39.6
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.||+|+||+||||. +....+.+...++|+++++. |+.++|+|+.+
T Consensus 3 M~~kli~fDlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~ 48 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLT-NSKKEISSRNRETLIRIQEQ-GIRLVLASGRP 48 (279)
T ss_dssp -CCCEEEECCCCCCS-CTTSCCCHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CcceEEEEeCCCCCC-CCCCccCHHHHHHHHHHHHC-CCEEEEEcCCC
Confidence 468999999999999 66668899999999999987 99998888764
No 98
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=98.97 E-value=7.5e-10 Score=95.03 Aligned_cols=84 Identities=15% Similarity=0.163 Sum_probs=69.1
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHHH-HHHHHHHh
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAGT-AEEIEKHF 270 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p~-le~alk~l 270 (299)
..+.|++.+.|+.|++. |++++|+||+. ...+..+++.+|+. .+.. +..||.+. ++.+++++
T Consensus 93 ~~~~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 163 (241)
T 2hoq_A 93 LREVPGARKVLIRLKEL-GYELGIITDGN--------PVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAF 163 (241)
T ss_dssp CCBCTTHHHHHHHHHHH-TCEEEEEECSC--------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHC-CCEEEEEECCC--------chhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHc
Confidence 34679999999999997 99999999986 66778888888874 2221 34688874 88999999
Q ss_pred CCCCCcEEEEcCCc-ccccccce
Q 022336 271 GCQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 271 Gi~PeEiamVGDrl-~DI~gAn~ 292 (299)
|++|++|+||||+. +||.+|+.
T Consensus 164 g~~~~~~i~iGD~~~~Di~~a~~ 186 (241)
T 2hoq_A 164 NVKPEEALMVGDRLYSDIYGAKR 186 (241)
T ss_dssp TCCGGGEEEEESCTTTTHHHHHH
T ss_pred CCCcccEEEECCCchHhHHHHHH
Confidence 99999999999998 99887654
No 99
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=98.96 E-value=1.1e-09 Score=101.41 Aligned_cols=103 Identities=14% Similarity=0.003 Sum_probs=71.3
Q ss_pred cCCcEEEEeccCeeecC-------------C------------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCc
Q 022336 181 RGFKGVVFDKDNTLTAP-------------Y------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN 235 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p-------------~------------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~ 235 (299)
.+-.+||||+||||+.- + ...+.|++.+.|+.|++. |++|+||||+... .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~-G~ki~ivTgR~~~----~ 130 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSH-NGKVFYVTNRKDS----T 130 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHT-TEEEEEEEEEETT----T
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCcc----c
Confidence 34569999999999821 1 223568999999999997 9999999999721 0
Q ss_pred cHHHHHHHHHHcCCcE-----EEc--cCCCCHHHHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 236 DASKARKLEGKIGIKV-----IRH--RVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 236 ~~e~a~~~lk~LGI~v-----I~h--a~KKP~p~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
..+.+...++.+|+++ +.. ....+.+.+.++ +..|. ..++||||++.|+.+|.
T Consensus 131 ~r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l-~~~Gy--~iv~~vGD~~~Dl~~~~ 190 (262)
T 3ocu_A 131 EKSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEI-EKQGY--EIVLYVGDNLDDFGNTV 190 (262)
T ss_dssp THHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHH-HHTTE--EEEEEEESSGGGGCSTT
T ss_pred hHHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHH-HhcCC--CEEEEECCChHHhcccc
Confidence 2467888888999874 222 221122234444 44454 34999999999988753
No 100
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=98.94 E-value=7.8e-10 Score=98.93 Aligned_cols=84 Identities=11% Similarity=0.215 Sum_probs=68.7
Q ss_pred CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHc---CCc----EEE---ccCCCCHHH-HHHHH
Q 022336 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI---GIK----VIR---HRVKKPAGT-AEEIE 267 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~L---GI~----vI~---ha~KKP~p~-le~al 267 (299)
...+.|++.+.|+.|++. |++++|+||+. ...++.+.+.+ |+. .+. .+ .||.|. ++.++
T Consensus 128 ~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~--------~~~~~~~l~~~~~~~l~~~fd~i~~~~~~-~KP~p~~~~~~~ 197 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREA-GMKVYIYSSGS--------VEAQKLLFGHSTEGDILELVDGHFDTKIG-HKVESESYRKIA 197 (261)
T ss_dssp CBCCCTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHTBTTBCCGGGCSEEECGGGC-CTTCHHHHHHHH
T ss_pred ccccCcCHHHHHHHHHhC-CCeEEEEeCCC--------HHHHHHHHHhhcccChHhhccEEEecCCC-CCCCHHHHHHHH
Confidence 356889999999999997 99999999997 56667766644 342 222 24 799885 89999
Q ss_pred HHhCCCCCcEEEEcCCcccccccce
Q 022336 268 KHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 268 k~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
+++|++|++|+||||+..||.||+.
T Consensus 198 ~~lg~~p~~~l~VgDs~~di~aA~~ 222 (261)
T 1yns_A 198 DSIGCSTNNILFLTDVTREASAAEE 222 (261)
T ss_dssp HHHTSCGGGEEEEESCHHHHHHHHH
T ss_pred HHhCcCcccEEEEcCCHHHHHHHHH
Confidence 9999999999999999999988874
No 101
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=98.94 E-value=7.8e-10 Score=99.72 Aligned_cols=104 Identities=17% Similarity=0.060 Sum_probs=75.1
Q ss_pred CcEEEEeccCeeecCCCc-----------ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHH-----
Q 022336 183 FKGVVFDKDNTLTAPYSL-----------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK----- 246 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~-----------~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~----- 246 (299)
.+.+++|.|||+...... .++|++.+.|+.|++. |++++|+||+.... .+.+...++.
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-g~~~~v~T~k~~~~-----~~~~~~~l~~~~~~~ 232 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRESGT-----KEDPTKYYRMTRKWV 232 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSCCCC-----SSSTTHHHHHHHHHH
T ss_pred cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHC-CCeEEEEeCCCccc-----chhHHHHHHhccccc
Confidence 478999999998643222 2589999999999997 99999999997311 1123333444
Q ss_pred ---cCCc--EEE---ccCCCCHHH-HHHHHHHhCCCCCc-EEEEcCCcccccccce
Q 022336 247 ---IGIK--VIR---HRVKKPAGT-AEEIEKHFGCQSSQ-LIMVDMCRIVIFPGPV 292 (299)
Q Consensus 247 ---LGI~--vI~---ha~KKP~p~-le~alk~lGi~PeE-iamVGDrl~DI~gAn~ 292 (299)
+|+. .+. ....||+|. +..+++.++..+.+ ++||||+..||.+|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~ 288 (301)
T 1ltq_A 233 EDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRR 288 (301)
T ss_dssp HHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHH
T ss_pred ccccCCCchheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHH
Confidence 6763 222 124678885 77888999888755 6999999999988764
No 102
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.93 E-value=1.2e-09 Score=95.38 Aligned_cols=44 Identities=16% Similarity=0.277 Sum_probs=39.3
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+|+|+||+||||. +....+.+...++|+++++. |+.++|+|+.+
T Consensus 5 ~kli~fDlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~ 48 (274)
T 3fzq_A 5 YKLLILDIDGTLR-DEVYGIPESAKHAIRLCQKN-HCSVVICTGRS 48 (274)
T ss_dssp CCEEEECSBTTTB-BTTTBCCHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred ceEEEEECCCCCC-CCCCcCCHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 7999999999999 55557889999999999987 99999999886
No 103
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=98.92 E-value=5.2e-10 Score=92.93 Aligned_cols=82 Identities=10% Similarity=-0.048 Sum_probs=67.8
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhC
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFG 271 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lG 271 (299)
.+.|++.+.|+.|++. | +++|+||+. ...+..+++.+|+. .+.. ...||.+ .++.+++++|
T Consensus 86 ~~~~~~~~~l~~l~~~-g-~~~i~s~~~--------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 155 (200)
T 3cnh_A 86 QPRPEVLALARDLGQR-Y-RMYSLNNEG--------RDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQ 155 (200)
T ss_dssp CBCHHHHHHHHHHTTT-S-EEEEEECCC--------HHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHc-C-CEEEEeCCc--------HHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcC
Confidence 3779999999999987 9 999999997 66778888888863 2211 3468887 4889999999
Q ss_pred CCCCcEEEEcCCcccccccce
Q 022336 272 CQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 272 i~PeEiamVGDrl~DI~gAn~ 292 (299)
++|++++||||+..||.+|+.
T Consensus 156 ~~~~~~~~vgD~~~Di~~a~~ 176 (200)
T 3cnh_A 156 VRPEEAVMVDDRLQNVQAARA 176 (200)
T ss_dssp CCGGGEEEEESCHHHHHHHHH
T ss_pred CCHHHeEEeCCCHHHHHHHHH
Confidence 999999999999999888764
No 104
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.92 E-value=2.4e-09 Score=94.46 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=30.4
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.||+|+||+||||. +....+.+...++|+++++. |+.++|+|+.+
T Consensus 3 m~~kli~~DlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~ 48 (279)
T 3mpo_A 3 LTIKLIAIDIDGTLL-NEKNELAQATIDAVQAAKAQ-GIKVVLCTGRP 48 (279)
T ss_dssp --CCEEEECC------------CHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred cceEEEEEcCcCCCC-CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCC
Confidence 358999999999999 55667889999999999987 99999999875
No 105
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=98.91 E-value=6.9e-11 Score=100.10 Aligned_cols=74 Identities=3% Similarity=-0.042 Sum_probs=55.7
Q ss_pred ccCchHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEE
Q 022336 201 TLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIM 279 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~f-GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiam 279 (299)
.+.|++.+.|++|++ . |++++|+||+. ...++.+++.+|+ +... ....+++++|++|++++|
T Consensus 73 ~~~~g~~e~L~~L~~-~~g~~~~ivT~~~--------~~~~~~~l~~~gl---f~~i-----~~~~~~~~~~~~~~~~~~ 135 (193)
T 2i7d_A 73 EPIPGALDAVREMND-LPDTQVFICTSPL--------LKYHHCVGEKYRW---VEQH-----LGPQFVERIILTRDKTVV 135 (193)
T ss_dssp CBCTTHHHHHHHHHT-STTEEEEEEECCC--------SSCTTTHHHHHHH---HHHH-----HCHHHHTTEEECSCGGGB
T ss_pred ccCcCHHHHHHHHHh-CCCCeEEEEeCCC--------hhhHHHHHHHhCc---hhhh-----cCHHHHHHcCCCcccEEE
Confidence 457899999999987 4 79999999997 2334455556665 1100 001478899999999999
Q ss_pred EcCCccc----ccccc
Q 022336 280 VDMCRIV----IFPGP 291 (299)
Q Consensus 280 VGDrl~D----I~gAn 291 (299)
|||+..| |.||+
T Consensus 136 vgDs~~dD~~~i~~A~ 151 (193)
T 2i7d_A 136 LGDLLIDDKDTVRGQE 151 (193)
T ss_dssp CCSEEEESSSCCCSSC
T ss_pred ECCchhhCcHHHhhcc
Confidence 9999999 99998
No 106
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=98.91 E-value=1e-09 Score=97.36 Aligned_cols=83 Identities=16% Similarity=0.158 Sum_probs=68.2
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHHH-HHHHHHHh
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAGT-AEEIEKHF 270 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p~-le~alk~l 270 (299)
..+.|++.+.|+.|++ |++++|+||+. ...+..+++.+|+. .+.. ...||.|. ++.+++++
T Consensus 120 ~~~~~g~~~~L~~L~~--~~~l~i~Tn~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~ 189 (260)
T 2gfh_A 120 MILADDVKAMLTELRK--EVRLLLLTNGD--------RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLL 189 (260)
T ss_dssp CCCCHHHHHHHHHHHT--TSEEEEEECSC--------HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHc--CCcEEEEECcC--------hHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHc
Confidence 4577999999999986 69999999997 66778888888874 2211 34688874 89999999
Q ss_pred CCCCCcEEEEcCC-cccccccce
Q 022336 271 GCQSSQLIMVDMC-RIVIFPGPV 292 (299)
Q Consensus 271 Gi~PeEiamVGDr-l~DI~gAn~ 292 (299)
|++|++|+||||+ ..||.+|+.
T Consensus 190 ~~~~~~~~~vGDs~~~Di~~A~~ 212 (260)
T 2gfh_A 190 GVQPGDCVMVGDTLETDIQGGLN 212 (260)
T ss_dssp TCCGGGEEEEESCTTTHHHHHHH
T ss_pred CCChhhEEEECCCchhhHHHHHH
Confidence 9999999999995 899988764
No 107
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=98.91 E-value=1.9e-09 Score=99.64 Aligned_cols=100 Identities=13% Similarity=0.041 Sum_probs=69.7
Q ss_pred cEEEEeccCeeecC-------------------------CCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHH
Q 022336 184 KGVVFDKDNTLTAP-------------------------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS 238 (299)
Q Consensus 184 RaLVlD~DNTLT~p-------------------------~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e 238 (299)
.+||||+||||+.- +...+.|++.+.|+.|++. |++|+||||+... ...+
T Consensus 59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~-G~~i~ivTgR~~~----~~r~ 133 (260)
T 3pct_A 59 KAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNAN-GGTMFFVSNRRDD----VEKA 133 (260)
T ss_dssp EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHT-TCEEEEEEEEETT----TSHH
T ss_pred CEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCcc----ccHH
Confidence 49999999999821 1234678999999999997 9999999999721 0256
Q ss_pred HHHHHHHHcCCcE-----EEccCCCCH-HHHHHHHHHhCCCCCcEEEEcCCccccccc
Q 022336 239 KARKLEGKIGIKV-----IRHRVKKPA-GTAEEIEKHFGCQSSQLIMVDMCRIVIFPG 290 (299)
Q Consensus 239 ~a~~~lk~LGI~v-----I~ha~KKP~-p~le~alk~lGi~PeEiamVGDrl~DI~gA 290 (299)
.+...++.+|++. +.....++. ....+.++..|. ..++||||++.|+.++
T Consensus 134 ~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy--~iv~~iGD~~~Dl~~~ 189 (260)
T 3pct_A 134 GTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGY--DIVLFVGDNLNDFGDA 189 (260)
T ss_dssp HHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTC--EEEEEEESSGGGGCGG
T ss_pred HHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCC--CEEEEECCChHHcCcc
Confidence 7888889999874 222211222 223333443343 5599999999998773
No 108
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=98.88 E-value=5.6e-10 Score=98.03 Aligned_cols=105 Identities=18% Similarity=0.134 Sum_probs=80.2
Q ss_pred HHHcCCcEEEEeccCeeecCC----------------------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCc
Q 022336 178 LQRRGFKGVVFDKDNTLTAPY----------------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN 235 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~----------------------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~ 235 (299)
....+-+.||||+|+||.... .....|++.++|+++++. ++++|+|++.
T Consensus 23 ~~~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~--~~i~I~Tss~------- 93 (195)
T 2hhl_A 23 VLDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL--FECVLFTASL------- 93 (195)
T ss_dssp GGGTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSC-------
T ss_pred cccCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC--CeEEEEcCCC-------
Confidence 345788999999999998310 123579999999999985 8999999998
Q ss_pred cHHHHHHHHHHcCCcE-E---E--ccCCCCHHHHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 236 DASKARKLEGKIGIKV-I---R--HRVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 236 ~~e~a~~~lk~LGI~v-I---~--ha~KKP~p~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
...++.+++.+|+.. + . ..+......+.++++.+|.++++|++|||+..++.+|+.
T Consensus 94 -~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ 155 (195)
T 2hhl_A 94 -AKYADPVADLLDRWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPE 155 (195)
T ss_dssp -HHHHHHHHHHHCCSSCEEEEECGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGG
T ss_pred -HHHHHHHHHHhCCcccEEEEEEcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCcc
Confidence 789999999998742 1 1 112111123567788999999999999999999877653
No 109
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.86 E-value=5.3e-09 Score=93.56 Aligned_cols=52 Identities=13% Similarity=0.006 Sum_probs=39.7
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
.+..+...+|+|+||+||||. +....+.+...++|+++++. |++++|+|+.+
T Consensus 13 ~~~~~~~~~kli~~DlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~ 64 (285)
T 3pgv_A 13 ENLYFQGMYQVVASDLDGTLL-SPDHFLTPYAKETLKLLTAR-GINFVFATGRH 64 (285)
T ss_dssp --------CCEEEEECCCCCS-CTTSCCCHHHHHHHHHHHTT-TCEEEEECSSC
T ss_pred ccccccCcceEEEEeCcCCCC-CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCC
Confidence 355678899999999999999 55667899999999999987 99999998875
No 110
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=98.83 E-value=7.7e-10 Score=95.60 Aligned_cols=102 Identities=13% Similarity=0.080 Sum_probs=78.1
Q ss_pred HcCCcEEEEeccCeeecCC----------------------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccH
Q 022336 180 RRGFKGVVFDKDNTLTAPY----------------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA 237 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~----------------------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~ 237 (299)
..+-+.||||+|+||.... .....|++.++|+++.+. ++++|+||+. .
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~--~~i~I~T~~~--------~ 81 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL--FECVLFTASL--------A 81 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSC--------H
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC--CCEEEEcCCC--------H
Confidence 4677999999999997210 124589999999999985 8999999998 7
Q ss_pred HHHHHHHHHcCCcE-E---E--ccCCCCHHHHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 238 SKARKLEGKIGIKV-I---R--HRVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 238 e~a~~~lk~LGI~v-I---~--ha~KKP~p~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
..++.+++.+|... + . ..+......+.+.++.+|.++++|+||||+..++.+++
T Consensus 82 ~~a~~vl~~ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~ 141 (181)
T 2ght_A 82 KYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHP 141 (181)
T ss_dssp HHHHHHHHHHCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCT
T ss_pred HHHHHHHHHHCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCc
Confidence 88999999998742 1 1 12211112356677889999999999999999987664
No 111
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=98.79 E-value=6e-09 Score=92.99 Aligned_cols=36 Identities=3% Similarity=-0.109 Sum_probs=30.2
Q ss_pred CCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 257 KKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 257 KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
.++.+ .++.+++++|+++++++||||+.+|+.+++.
T Consensus 209 ~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ 245 (289)
T 3gyg_A 209 GTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQT 245 (289)
T ss_dssp CCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTT
T ss_pred CCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHh
Confidence 45555 4889999999999999999999999766554
No 112
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.79 E-value=6.1e-10 Score=91.32 Aligned_cols=80 Identities=10% Similarity=0.022 Sum_probs=56.0
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEE------cc---CCCCHH-HHHHHHHHhC
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR------HR---VKKPAG-TAEEIEKHFG 271 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~------ha---~KKP~p-~le~alk~lG 271 (299)
+.|++.+.++.|++. |++++|+||+. ...++.+ +.+|+..+. .. ..+|.+ ....+++.+
T Consensus 80 ~~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l- 148 (201)
T 4ap9_A 80 VSPEARELVETLREK-GFKVVLISGSF--------EEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF- 148 (201)
T ss_dssp CCHHHHHHHHHHHHT-TCEEEEEEEEE--------TTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG-
T ss_pred CChhHHHHHHHHHHC-CCeEEEEeCCc--------HHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc-
Confidence 356777888889987 99999999987 3455666 778875331 10 123333 234556656
Q ss_pred CCCCcEEEEcCCccccccccee
Q 022336 272 CQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 272 i~PeEiamVGDrl~DI~gAn~~ 293 (299)
++++++||||+.+||.+|+.+
T Consensus 149 -~~~~~i~iGD~~~Di~~~~~a 169 (201)
T 4ap9_A 149 -RDGFILAMGDGYADAKMFERA 169 (201)
T ss_dssp -TTSCEEEEECTTCCHHHHHHC
T ss_pred -CcCcEEEEeCCHHHHHHHHhC
Confidence 999999999999998877643
No 113
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.79 E-value=9.8e-09 Score=90.04 Aligned_cols=46 Identities=17% Similarity=0.188 Sum_probs=40.6
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
-||+|+||+||||..+....+.+...++|+++++. |++++|+|+.+
T Consensus 11 miKli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~ 56 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDS-GIKIVIATGRA 56 (268)
T ss_dssp CCCEEEECSBTTTBCTTTCSCCHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred ceEEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCC
Confidence 48999999999999435668899999999999997 99999999875
No 114
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=98.79 E-value=5.2e-09 Score=90.26 Aligned_cols=83 Identities=8% Similarity=0.121 Sum_probs=66.9
Q ss_pred CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EEccCCCCHH-HHHHHHHHhCCC
Q 022336 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRHRVKKPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~ha~KKP~p-~le~alk~lGi~ 273 (299)
...+.|++.+.|+.|+ . |++++|+||+. ...+...++.+|+.. +.. ..||.+ .++.+++++|++
T Consensus 110 ~~~~~~~~~~~l~~l~-~-~~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~i~~-~~kp~~~~~~~~~~~l~~~ 178 (251)
T 2pke_A 110 PVEVIAGVREAVAAIA-A-DYAVVLITKGD--------LFHQEQKIEQSGLSDLFPRIEV-VSEKDPQTYARVLSEFDLP 178 (251)
T ss_dssp CCCBCTTHHHHHHHHH-T-TSEEEEEEESC--------HHHHHHHHHHHSGGGTCCCEEE-ESCCSHHHHHHHHHHHTCC
T ss_pred cCCcCccHHHHHHHHH-C-CCEEEEEeCCC--------HHHHHHHHHHcCcHHhCceeee-eCCCCHHHHHHHHHHhCcC
Confidence 3456799999999998 6 89999999987 566777777777631 222 357776 489999999999
Q ss_pred CCcEEEEcCCc-ccccccce
Q 022336 274 SSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 274 PeEiamVGDrl-~DI~gAn~ 292 (299)
|++|+||||+. +||.+|+.
T Consensus 179 ~~~~i~iGD~~~~Di~~a~~ 198 (251)
T 2pke_A 179 AERFVMIGNSLRSDVEPVLA 198 (251)
T ss_dssp GGGEEEEESCCCCCCHHHHH
T ss_pred chhEEEECCCchhhHHHHHH
Confidence 99999999999 99877654
No 115
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=98.77 E-value=6.3e-09 Score=86.24 Aligned_cols=83 Identities=12% Similarity=0.163 Sum_probs=66.8
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhC
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFG 271 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lG 271 (299)
.+.|++.+.++.+++. |++++|+||.. ...++.+.+.+|+. .+.. ...||.+ .++.+++++|
T Consensus 94 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~ 164 (226)
T 1te2_A 94 PLLPGVREAVALCKEQ-GLLVGLASASP--------LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLG 164 (226)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHT
T ss_pred CcCccHHHHHHHHHHC-CCcEEEEeCCc--------HHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcC
Confidence 4568899999999986 99999999987 56677788888864 2221 2457765 5899999999
Q ss_pred CCCCcEEEEcCCcccccccce
Q 022336 272 CQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 272 i~PeEiamVGDrl~DI~gAn~ 292 (299)
++++++++|||+.+||.+|+.
T Consensus 165 i~~~~~i~iGD~~nDi~~a~~ 185 (226)
T 1te2_A 165 VDPLTCVALEDSVNGMIASKA 185 (226)
T ss_dssp SCGGGEEEEESSHHHHHHHHH
T ss_pred CCHHHeEEEeCCHHHHHHHHH
Confidence 999999999999999877654
No 116
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=98.77 E-value=9.3e-09 Score=85.97 Aligned_cols=86 Identities=15% Similarity=0.125 Sum_probs=66.5
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHhC
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHFG 271 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~lG 271 (299)
.+.|++.+.|+.+++. |++++|+||+. .. ....+....+.+|+. .+.. ...||.+ .+..+++++|
T Consensus 99 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~-~~----~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg 172 (235)
T 2om6_A 99 LVLEGTKEALQFVKER-GLKTAVIGNVM-FW----PGSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFE 172 (235)
T ss_dssp GBCTTHHHHHHHHHHT-TCEEEEEECCC-SS----CHHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTT
T ss_pred CcCccHHHHHHHHHHC-CCEEEEEcCCc-cc----chhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcC
Confidence 3579999999999997 99999999974 10 034566677777763 2221 3468877 4889999999
Q ss_pred CCCCcEEEEcCCc-ccccccce
Q 022336 272 CQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 272 i~PeEiamVGDrl-~DI~gAn~ 292 (299)
++|++|++|||+. +||.+|+.
T Consensus 173 i~~~~~~~iGD~~~nDi~~a~~ 194 (235)
T 2om6_A 173 VKPEESLHIGDTYAEDYQGARK 194 (235)
T ss_dssp CCGGGEEEEESCTTTTHHHHHH
T ss_pred CCccceEEECCChHHHHHHHHH
Confidence 9999999999999 99877654
No 117
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.75 E-value=1.9e-08 Score=90.07 Aligned_cols=52 Identities=23% Similarity=0.075 Sum_probs=41.1
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+......+|+|+||+||||.......+.+...++|+++++. |+.++|+|+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~ 65 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDK-GIIFVVCSGRQ 65 (283)
T ss_dssp -----CCCCEEEECCBTTTBSTTCSCCCHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred hhhhccCceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCC
Confidence 44567899999999999999333337899999999999997 99999999875
No 118
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=98.74 E-value=2.7e-10 Score=96.91 Aligned_cols=73 Identities=7% Similarity=-0.079 Sum_probs=52.9
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE-EEccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-IRHRVKKPAGTAEEIEKHFGCQSSQLIMV 280 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v-I~ha~KKP~p~le~alk~lGi~PeEiamV 280 (299)
+.|++.+.|+.|++..|++++|+||+.. ..++.+++.+|+.. ++. ..+++++|++|++++||
T Consensus 76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~--------~~~~~~l~~~~l~~~~f~---------~~~~~~l~~~~~~~~~v 138 (197)
T 1q92_A 76 PLPGAVEAVKEMASLQNTDVFICTSPIK--------MFKYCPYEKYAWVEKYFG---------PDFLEQIVLTRDKTVVS 138 (197)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCS--------CCSSHHHHHHHHHHHHHC---------GGGGGGEEECSCSTTSC
T ss_pred cCcCHHHHHHHHHhcCCCeEEEEeCCcc--------chHHHHHHHhchHHHhch---------HHHHHHhccCCccEEEE
Confidence 5688888999998732799999999972 22333344444321 111 35678899999999999
Q ss_pred cCCccc----ccccc
Q 022336 281 DMCRIV----IFPGP 291 (299)
Q Consensus 281 GDrl~D----I~gAn 291 (299)
||+..| +.+|+
T Consensus 139 gDs~~dD~~~~~~a~ 153 (197)
T 1q92_A 139 ADLLIDDRPDITGAE 153 (197)
T ss_dssp CSEEEESCSCCCCSC
T ss_pred CcccccCCchhhhcc
Confidence 999999 99988
No 119
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=98.74 E-value=3.9e-09 Score=101.93 Aligned_cols=85 Identities=9% Similarity=0.068 Sum_probs=70.4
Q ss_pred CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE------EEc----c-----------CC
Q 022336 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV------IRH----R-----------VK 257 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v------I~h----a-----------~K 257 (299)
...+.|++.+.|+.|++. |++++|+||+. ...+..+++.+|+.. +.. . ..
T Consensus 213 ~~~l~pGv~elL~~Lk~~-Gi~laIvTn~~--------~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~ 283 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGA-GFELGIATGRP--------YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLG 283 (384)
T ss_dssp BSSCHHHHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCC
T ss_pred CCCcCcCHHHHHHHHHhC-CCEEEEEeCCc--------HHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCC
Confidence 346789999999999997 99999999998 678888888888732 211 1 26
Q ss_pred CCHHH-HHHHHHHhC--------------CCCCcEEEEcCCcccccccce
Q 022336 258 KPAGT-AEEIEKHFG--------------CQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 258 KP~p~-le~alk~lG--------------i~PeEiamVGDrl~DI~gAn~ 292 (299)
||.|. +..+++.+| ++|++|+||||+..||.||+.
T Consensus 284 KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~ 333 (384)
T 1qyi_A 284 KPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQK 333 (384)
T ss_dssp TTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHH
Confidence 88875 888999999 899999999999999988864
No 120
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.74 E-value=9.4e-09 Score=92.97 Aligned_cols=46 Identities=15% Similarity=0.056 Sum_probs=39.3
Q ss_pred cCCcEEEEeccCeeecCCCcccCch-HHHHHHHHHHhCCCcEEEEeCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGP-LSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pg-v~e~L~~Lke~fGikVaIVSNna 228 (299)
+.||+|+||+||||. +....+.+. ..++|+++++. |+.++|+|+.+
T Consensus 35 M~iKli~fDlDGTLl-d~~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~ 81 (304)
T 3l7y_A 35 MSVKVIATDMDGTFL-NSKGSYDHNRFQRILKQLQER-DIRFVVASSNP 81 (304)
T ss_dssp -CCSEEEECCCCCCS-CTTSCCCHHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred eeeEEEEEeCCCCCC-CCCCccCHHHHHHHHHHHHHC-CCEEEEEeCCC
Confidence 358999999999999 555567777 88999999997 99999999875
No 121
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=98.74 E-value=6.3e-09 Score=84.60 Aligned_cols=84 Identities=11% Similarity=0.133 Sum_probs=66.2
Q ss_pred CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHH
Q 022336 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKH 269 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~ 269 (299)
...+.|++.+.++.+++. |++++|+||+. ...+. ..+.+|+. .+.. ...||.+ .++.++++
T Consensus 83 ~~~~~~~~~~~l~~l~~~-g~~~~i~s~~~--------~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 152 (207)
T 2go7_A 83 QVVLMPGAREVLAWADES-GIQQFIYTHKG--------NNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDK 152 (207)
T ss_dssp GCEECTTHHHHHHHHHHT-TCEEEEECSSC--------THHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHH
T ss_pred cceeCcCHHHHHHHHHHC-CCeEEEEeCCc--------hHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHH
Confidence 345679999999999997 99999999987 45566 77777763 1221 2357765 48899999
Q ss_pred hCCCCCcEEEEcCCcccccccce
Q 022336 270 FGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 270 lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
+|++|+++++|||+.+||.+|+.
T Consensus 153 ~~i~~~~~~~iGD~~nDi~~~~~ 175 (207)
T 2go7_A 153 YQLNSDNTYYIGDRTLDVEFAQN 175 (207)
T ss_dssp HTCCGGGEEEEESSHHHHHHHHH
T ss_pred hCCCcccEEEECCCHHHHHHHHH
Confidence 99999999999999999877654
No 122
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=98.72 E-value=9.4e-09 Score=87.59 Aligned_cols=81 Identities=19% Similarity=0.158 Sum_probs=62.0
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHh
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHF 270 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~l 270 (299)
..+.|++.+.|++|++. |++++|+||+. . .+..+++.+|+. .+.. +..||.+ .++.+++++
T Consensus 94 ~~~~~~~~~~l~~l~~~-g~~~~i~Tn~~--------~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 163 (220)
T 2zg6_A 94 AFLYDDTLEFLEGLKSN-GYKLALVSNAS--------P-RVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKV 163 (220)
T ss_dssp EEECTTHHHHHHHHHTT-TCEEEECCSCH--------H-HHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHH
T ss_pred ceECcCHHHHHHHHHHC-CCEEEEEeCCc--------H-HHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHc
Confidence 45789999999999997 99999999985 3 467788888864 2211 3468887 489999999
Q ss_pred CCCCCcEEEEcCCcc-ccccccee
Q 022336 271 GCQSSQLIMVDMCRI-VIFPGPVV 293 (299)
Q Consensus 271 Gi~PeEiamVGDrl~-DI~gAn~~ 293 (299)
|++| +||||+.. ||.+|+.+
T Consensus 164 ~~~~---~~vgD~~~~Di~~a~~a 184 (220)
T 2zg6_A 164 GYPA---VHVGDIYELDYIGAKRS 184 (220)
T ss_dssp CSSE---EEEESSCCCCCCCSSSC
T ss_pred CCCe---EEEcCCchHhHHHHHHC
Confidence 9998 99999999 99998864
No 123
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=98.69 E-value=8.7e-09 Score=85.61 Aligned_cols=82 Identities=17% Similarity=0.122 Sum_probs=64.0
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----EEEc----cCCCCHH-HHHHHHHHh
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH----RVKKPAG-TAEEIEKHF 270 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~----vI~h----a~KKP~p-~le~alk~l 270 (299)
..+.|++.+.++.+++. |++++|+||+. .+..+.+.+|+. .+.. +..||.+ .++.+++++
T Consensus 90 ~~~~~~~~~~l~~l~~~-g~~~~i~t~~~----------~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l 158 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSN-KIKIALASASK----------NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp GGBCTTHHHHHHHHHHT-TCEEEECCCCT----------THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHC-CCeEEEEcCcH----------HHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence 45679999999999986 99999999973 234456666753 2211 3467776 589999999
Q ss_pred CCCCCcEEEEcCCcccccccce
Q 022336 271 GCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 271 Gi~PeEiamVGDrl~DI~gAn~ 292 (299)
|++|++|++|||+.+||.+|+.
T Consensus 159 gi~~~~~i~iGD~~nDi~~a~~ 180 (221)
T 2wf7_A 159 GVAPSESIGLEDSQAGIQAIKD 180 (221)
T ss_dssp TCCGGGEEEEESSHHHHHHHHH
T ss_pred CCChhHeEEEeCCHHHHHHHHH
Confidence 9999999999999999887764
No 124
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=98.69 E-value=8.7e-09 Score=86.56 Aligned_cols=85 Identities=13% Similarity=0.068 Sum_probs=65.8
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EEc-----cCCCCHHH-HHHHHHH
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRH-----RVKKPAGT-AEEIEKH 269 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~h-----a~KKP~p~-le~alk~ 269 (299)
..+.|++.+.|+.|++..|++++|+||+. ...+..+++.+|+.. +.. ..+||.+. ++.++++
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~ 163 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNF--------EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRM 163 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSC--------HHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCc--------HHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHH
Confidence 34679999999999873279999999987 667788888888642 111 12345553 7899999
Q ss_pred hC--CCCCcEEEEcCCcccccccce
Q 022336 270 FG--CQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 270 lG--i~PeEiamVGDrl~DI~gAn~ 292 (299)
+| ++|++|+||||+.+||.+|+.
T Consensus 164 lg~~~~~~~~i~iGD~~~Di~~a~~ 188 (234)
T 2hcf_A 164 TGANYSPSQIVIIGDTEHDIRCARE 188 (234)
T ss_dssp HCCCCCGGGEEEEESSHHHHHHHHT
T ss_pred hCCCCCcccEEEECCCHHHHHHHHH
Confidence 99 999999999999999877664
No 125
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.68 E-value=3.6e-08 Score=86.35 Aligned_cols=45 Identities=29% Similarity=0.235 Sum_probs=39.2
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
.+|+|+||+||||. .....+.+...++++++++. |++++++|+++
T Consensus 2 ~~kli~~DlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~~~~aTGR~ 46 (258)
T 2pq0_A 2 GRKIVFFDIDGTLL-DEQKQLPLSTIEAVRRLKQS-GVYVAIATGRA 46 (258)
T ss_dssp CCCEEEECTBTTTB-CTTSCCCHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CceEEEEeCCCCCc-CCCCccCHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 47999999999999 44556888999999999997 99999999875
No 126
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=98.58 E-value=6.4e-08 Score=85.53 Aligned_cols=110 Identities=15% Similarity=0.061 Sum_probs=79.6
Q ss_pred HHHHHcCCcEEE-Ee--------ccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCC----CCcc-HHHHH
Q 022336 176 AELQRRGFKGVV-FD--------KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE----YDND-ASKAR 241 (299)
Q Consensus 176 ~~Lk~~GIRaLV-lD--------~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~----~d~~-~e~a~ 241 (299)
+.|++.|++.+. -+ .|.++........+|++.+.++.|+ . |+++ |+||+..... .-+. .....
T Consensus 96 ~~l~~~G~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~l~~L~-~-g~~~-i~tn~~~~~~~~~~~l~~~~~l~~ 172 (263)
T 1zjj_A 96 KEMQALGWGIVTLDEARQGSWKEVKHVVVGLDPDLTYEKLKYATLAIR-N-GATF-IGTNPDATLPGEEGIYPGAGSIIA 172 (263)
T ss_dssp HHHHHHTSCBCCHHHHHTTGGGGCCEEEECCCTTCBHHHHHHHHHHHH-T-TCEE-EESCCCSEEEETTEEEECHHHHHH
T ss_pred HHHHHcCCeeccCCcccccccCCCCEEEEecCCCCCHHHHHHHHHHHH-C-CCEE-EEECCCccccCCCCCcCCcHHHHH
Confidence 567778887654 23 7778886666778899999999998 5 8998 9999863211 0011 33445
Q ss_pred HHHHHcCCcEEEccCCCCHHH-HHHHHHHhCCCCCcEEEEcCCc-ccccccce
Q 022336 242 KLEGKIGIKVIRHRVKKPAGT-AEEIEKHFGCQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 242 ~~lk~LGI~vI~ha~KKP~p~-le~alk~lGi~PeEiamVGDrl-~DI~gAn~ 292 (299)
.+...++...+.. .||.+. ++.++++ ++|++++||||++ .||.+|+.
T Consensus 173 ~~~~~~~~~~~~~--~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~ 221 (263)
T 1zjj_A 173 ALKVATNVEPIII--GKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKK 221 (263)
T ss_dssp HHHHHHCCCCEEC--STTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHH
T ss_pred HHHHHhCCCccEe--cCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHH
Confidence 5666666655433 588875 7888887 9999999999997 88988875
No 127
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.51 E-value=1.1e-07 Score=83.71 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=36.3
Q ss_pred EEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 185 aLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+|+||+||||+ +.. .+.+...++|+++++. |++++|+|+.+
T Consensus 2 li~~DlDGTLl-~~~-~i~~~~~~al~~l~~~-Gi~v~iaTGR~ 42 (259)
T 3zx4_A 2 IVFTDLDGTLL-DER-GELGPAREALERLRAL-GVPVVPVTAKT 42 (259)
T ss_dssp EEEECCCCCCS-CSS-SSCSTTHHHHHHHHHT-TCCEEEBCSSC
T ss_pred EEEEeCCCCCc-CCC-cCCHHHHHHHHHHHHC-CCeEEEEeCCC
Confidence 68999999999 444 8899999999999997 99999988875
No 128
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=98.49 E-value=2.2e-07 Score=94.02 Aligned_cols=80 Identities=18% Similarity=0.221 Sum_probs=68.1
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHc-CC-----------------cEEEccCCCCHH-H
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-GI-----------------KVIRHRVKKPAG-T 262 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~L-GI-----------------~vI~ha~KKP~p-~ 262 (299)
..|++..||+++++. | +|+|+||+. .+.++.+++.+ |+ +++....+||.. +
T Consensus 247 kdp~l~~~L~~Lr~~-G-KlfLiTNS~--------~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~ 316 (555)
T 2jc9_A 247 KDGKLPLLLSRMKEV-G-KVFLATNSD--------YKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFG 316 (555)
T ss_dssp CCTHHHHHHHHHHHH-S-EEEEECSSC--------HHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGT
T ss_pred CChHHHHHHHHHHHc-C-CEEEEeCCC--------hHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCccc
Confidence 467899999999998 9 999999998 88999999987 75 343444568772 2
Q ss_pred ----------------------------------HHHHHHHhCCCCCcEEEEcCCccc-ccccc
Q 022336 263 ----------------------------------AEEIEKHFGCQSSQLIMVDMCRIV-IFPGP 291 (299)
Q Consensus 263 ----------------------------------le~alk~lGi~PeEiamVGDrl~D-I~gAn 291 (299)
+..+++.+|++.++|+||||++++ |.+||
T Consensus 317 ~~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~k 380 (555)
T 2jc9_A 317 EGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSK 380 (555)
T ss_dssp TCCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHH
T ss_pred CCCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHH
Confidence 588999999999999999999999 99998
No 129
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=98.45 E-value=1.1e-07 Score=80.38 Aligned_cols=97 Identities=11% Similarity=0.056 Sum_probs=64.6
Q ss_pred CCcEEEEeccCeeecCCCc---ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSL---TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKK 258 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~---~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KK 258 (299)
++|+|+||+||||...... .+.|++.++|+++++. |+.++|+|+.+|- ....+...++.+|+++.....-.
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~-G~~iii~TgR~~~-----~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE-KHRLILWSVREGE-----LLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHH-----HHHHHHHHHHTTTCCCSEESSSS
T ss_pred CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHC-CCEEEEEeCCCcc-----cHHHHHHHHHHcCCCeEEEEcCC
Confidence 5899999999999953321 3567999999999997 9999999999731 13456666778888643223234
Q ss_pred CHHHHHHHHHHhCCCCCcEEEEcCCccc
Q 022336 259 PAGTAEEIEKHFGCQSSQLIMVDMCRIV 286 (299)
Q Consensus 259 P~p~le~alk~lGi~PeEiamVGDrl~D 286 (299)
|.... ......-++..-+||.|+..-
T Consensus 76 P~~~~--~~~~~~rK~~~~~fIDDR~~~ 101 (142)
T 2obb_A 76 PEEER--DHQGFSRKLKADLFIDDRNVG 101 (142)
T ss_dssp TTC-----CCSCCSSCCCSEEECTTSTT
T ss_pred chhhh--cchhhcCCcCCCEEeeccccC
Confidence 53211 111112246778889998754
No 130
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=97.83 E-value=2.2e-08 Score=89.93 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=75.5
Q ss_pred EEEeccCeeecC--CCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHH
Q 022336 186 VVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA 263 (299)
Q Consensus 186 LVlD~DNTLT~p--~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~l 263 (299)
+...+|+.+... ....+.|++.+.|++|++. |++++|+||+. ...++.+++.+|+..++... .|. ..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~T~~~--------~~~~~~~~~~~gl~~~f~~~-~p~-~k 187 (263)
T 2yj3_A 119 IAVYINGEPIASFNISDVPRPNLKDYLEKLKNE-GLKIIILSGDK--------EDKVKELSKELNIQEYYSNL-SPE-DK 187 (263)
Confidence 556666655421 2446889999999999997 99999999987 67788899999986554432 232 25
Q ss_pred HHHHHHhCCCCCcEEEEcCCccccccccee
Q 022336 264 EEIEKHFGCQSSQLIMVDMCRIVIFPGPVV 293 (299)
Q Consensus 264 e~alk~lGi~PeEiamVGDrl~DI~gAn~~ 293 (299)
..+++.++.++++|+||||+.+|+.+|+.+
T Consensus 188 ~~~~~~l~~~~~~~~~VGD~~~D~~aa~~A 217 (263)
T 2yj3_A 188 VRIIEKLKQNGNKVLMIGDGVNDAAALALA 217 (263)
Confidence 678899999999999999999998887654
No 131
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=98.32 E-value=1.5e-06 Score=76.64 Aligned_cols=60 Identities=23% Similarity=0.213 Sum_probs=44.8
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
||+|+||+||||+ .+.. +.++..++|+++++. |++++++||+++.. .......++.+|++
T Consensus 1 ik~i~~D~DGtL~-~~~~-~~~~~~~~l~~l~~~-g~~~~~~T~r~~~~-----~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 1 MVAIIFDMDGVLY-RGNR-AIPGVRELIEFLKER-GIPFAFLTNNSTKT-----PEMYREKLLKMGID 60 (263)
T ss_dssp CEEEEEECBTTTE-ETTE-ECTTHHHHHHHHHHH-TCCEEEEESCCSSC-----HHHHHHHHHTTTCC
T ss_pred CeEEEEeCcCceE-eCCE-eCccHHHHHHHHHHC-CCeEEEEeCCCCCC-----HHHHHHHHHHCCCC
Confidence 6899999999999 4443 448999999999997 99999999997321 23333333467774
No 132
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=98.25 E-value=1.5e-06 Score=78.69 Aligned_cols=82 Identities=12% Similarity=0.065 Sum_probs=55.5
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----EE--------------------ccC
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR--------------------HRV 256 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v----I~--------------------ha~ 256 (299)
.+.|++.++++.|++. |++++|+|+.- ...++.+++.+|+.. +. +..
T Consensus 141 ~l~~g~~e~i~~l~~~-gi~v~ivSgg~--------~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~ 211 (297)
T 4fe3_A 141 MLKEGYENFFGKLQQH-GIPVFIFSAGI--------GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVF 211 (297)
T ss_dssp CBCBTHHHHHHHHHHT-TCCEEEEEEEE--------HHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTT
T ss_pred CCCCcHHHHHHHHHHc-CCeEEEEeCCc--------HHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchh
Confidence 4567888899999997 99999999875 678999999998642 11 111
Q ss_pred CCCHHHHH-HHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 257 KKPAGTAE-EIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 257 KKP~p~le-~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
.|+.+..+ .....+.-..++++||||+++|+-+++
T Consensus 212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k 247 (297)
T 4fe3_A 212 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMAD 247 (297)
T ss_dssp CHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTT
T ss_pred hcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHh
Confidence 22222211 122233445678999999999965533
No 133
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=98.18 E-value=1.6e-06 Score=82.56 Aligned_cols=63 Identities=13% Similarity=0.174 Sum_probs=50.9
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
+..++++||+||||+ . ...+.|++.++++.|++. |++++++||+++.. ..+.++.+.+.+|++
T Consensus 11 ~~~~~~l~D~DGvl~-~-g~~~~p~a~~~l~~l~~~-g~~~~~vTNn~~~~----~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLF-R-GKKPIAGASDALKLLNRN-KIPYILLTNGGGFS----ERARTEFISSKLDVD 73 (352)
T ss_dssp -CCEEEEECCBTTTE-E-TTEECTTHHHHHHHHHHT-TCCEEEECSCCSSC----HHHHHHHHHHHHTSC
T ss_pred ccCCEEEEECCCeeE-c-CCeeCcCHHHHHHHHHHC-CCEEEEEeCCCCCC----chHHHHHHHHhcCCC
Confidence 468999999999999 3 346789999999999997 99999999997432 245677777778874
No 134
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.13 E-value=1.4e-05 Score=81.46 Aligned_cols=99 Identities=14% Similarity=0.206 Sum_probs=78.7
Q ss_pred HHHHcCCcEEEEeccCeeec--CCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc
Q 022336 177 ELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~--p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h 254 (299)
.+.+.|.+.+.+..|+++.. .-...+.|++.+.+++|++. |++++++|+.. ...++.+++++|+..++.
T Consensus 431 ~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~-Gi~v~~~TGd~--------~~~a~~ia~~lgi~~~~~ 501 (645)
T 3j08_A 431 KLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDN--------WRSAEAISRELNLDLVIA 501 (645)
T ss_dssp HHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHTCSEEEC
T ss_pred HHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHHcCCCEEEE
Confidence 45678999999999999762 12446789999999999997 99999999997 788999999999987765
Q ss_pred cCCCCHHHHHHHHHHhCCCCCcEEEEcCCcccc
Q 022336 255 RVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVI 287 (299)
Q Consensus 255 a~KKP~p~le~alk~lGi~PeEiamVGDrl~DI 287 (299)
.. .|.. -.++++.+... ++++||||..+|+
T Consensus 502 ~~-~P~~-K~~~v~~l~~~-~~v~~vGDg~ND~ 531 (645)
T 3j08_A 502 EV-LPHQ-KSEEVKKLQAK-EVVAFVGDGINDA 531 (645)
T ss_dssp SC-CTTC-HHHHHHHHTTT-CCEEEEECSSSCH
T ss_pred eC-CHHh-HHHHHHHHhhC-CeEEEEeCCHhHH
Confidence 43 3432 22455666655 8999999999993
No 135
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=98.13 E-value=3.5e-06 Score=75.56 Aligned_cols=59 Identities=17% Similarity=0.211 Sum_probs=50.2
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
+.+|+|++|+||||.. .+..+.+...++|++|++. |++++|+|+++ ...+..+.+.+|+
T Consensus 7 m~~~li~~DlDGTLl~-~~~~~~~~~~~~l~~l~~~-G~~~~iaTGR~--------~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 7 QQPLLVFSDLDGTLLD-SHSYDWQPAAPWLTRLREA-NVPVILCSSKT--------SAEMLYLQKTLGL 65 (275)
T ss_dssp CCCEEEEEECTTTTSC-SSCCSCCTTHHHHHHHHHT-TCCEEEECSSC--------HHHHHHHHHHTTC
T ss_pred cCceEEEEeCCCCCCC-CCCcCCHHHHHHHHHHHHC-CCeEEEEcCCC--------HHHHHHHHHHcCC
Confidence 5789999999999994 3445667889999999987 99999999997 6778888888876
No 136
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=98.08 E-value=3.4e-06 Score=68.27 Aligned_cols=45 Identities=18% Similarity=0.260 Sum_probs=38.4
Q ss_pred CcEEEEeccCeeecCCCc-----ccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 183 FKGVVFDKDNTLTAPYSL-----TLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~-----~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
||+|+||+||||+..... .+.++..++++++++. |++++|+|++.
T Consensus 1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gi~~~iaTGR~ 50 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARN 50 (126)
T ss_dssp CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhC-CCeEEEEeCCC
Confidence 689999999999944332 4678899999999997 99999999987
No 137
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=98.08 E-value=3.5e-06 Score=75.55 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=48.3
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
+|+|++|+||||. ..+..+.+...++|+++++. |++++|+|+++ ...+..+.+.+++
T Consensus 5 ~kli~~DlDGTLl-~~~~~i~~~~~~aL~~l~~~-Gi~vviaTGR~--------~~~~~~~~~~l~l 61 (282)
T 1rkq_A 5 IKLIAIDMDGTLL-LPDHTISPAVKNAIAAARAR-GVNVVLTTGRP--------YAGVHNYLKELHM 61 (282)
T ss_dssp CCEEEECCCCCCS-CTTSCCCHHHHHHHHHHHHT-TCEEEEECSSC--------GGGTHHHHHHTTC
T ss_pred ceEEEEeCCCCCC-CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCC--------HHHHHHHHHHhCC
Confidence 7999999999999 55567899999999999997 99999999997 4456666677665
No 138
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.07 E-value=2.2e-05 Score=80.99 Aligned_cols=99 Identities=14% Similarity=0.211 Sum_probs=78.6
Q ss_pred HHHHHcCCcEEEEeccCeeec--CCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEE
Q 022336 176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~--p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ 253 (299)
+.+.+.|.+.+.+..|+++.. --...+.|++.+.+++|++. |++++++|+.. ...++.+++.+|+..++
T Consensus 508 ~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~-Gi~v~~~TGd~--------~~~a~~ia~~lgi~~~~ 578 (723)
T 3j09_A 508 EKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDN--------WRSAEAISRELNLDLVI 578 (723)
T ss_dssp HHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHTCSEEE
T ss_pred HHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHC-CCEEEEECCCC--------HHHHHHHHHHcCCcEEE
Confidence 345678999999999999762 12446789999999999997 99999999987 78899999999998776
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEcCCccc
Q 022336 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIV 286 (299)
Q Consensus 254 ha~KKP~p~le~alk~lGi~PeEiamVGDrl~D 286 (299)
... .|... .++++.+.-. ++++||||..+|
T Consensus 579 ~~~-~P~~K-~~~v~~l~~~-~~v~~vGDg~ND 608 (723)
T 3j09_A 579 AEV-LPHQK-SEEVKKLQAK-EVVAFVGDGIND 608 (723)
T ss_dssp CSC-CTTCH-HHHHHHHTTT-CCEEEEECSSTT
T ss_pred ccC-CHHHH-HHHHHHHhcC-CeEEEEECChhh
Confidence 543 34322 2455556555 899999999999
No 139
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=98.06 E-value=1.1e-05 Score=83.88 Aligned_cols=106 Identities=15% Similarity=0.203 Sum_probs=81.6
Q ss_pred HHHHHcCCcEEEEeccCeeec--CCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEE
Q 022336 176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~--p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ 253 (299)
+.+...|.+.+.+..||++.. .-...+.|++.+.+++|++. |++++++|+.. ...++.+.+++|+..++
T Consensus 527 ~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~-Gi~v~mlTGd~--------~~~a~~ia~~lgi~~v~ 597 (736)
T 3rfu_A 527 DELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQS-GIEIVMLTGDS--------KRTAEAVAGTLGIKKVV 597 (736)
T ss_dssp HHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHH-TCEEEEECSSC--------HHHHHHHHHHHTCCCEE
T ss_pred HHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHC-CCeEEEECCCC--------HHHHHHHHHHcCCCEEE
Confidence 456789999999999999862 12445789999999999998 99999999987 78899999999997665
Q ss_pred ccCCCCHHHHHHHHHHhCCCCCcEEEEcCCccc---ccccce
Q 022336 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIV---IFPGPV 292 (299)
Q Consensus 254 ha~KKP~p~le~alk~lGi~PeEiamVGDrl~D---I~gAn~ 292 (299)
... .|... .++++.+.-..++++||||..+| +..|..
T Consensus 598 a~~-~P~~K-~~~v~~l~~~g~~V~~vGDG~ND~paL~~Adv 637 (736)
T 3rfu_A 598 AEI-MPEDK-SRIVSELKDKGLIVAMAGDGVNDAPALAKADI 637 (736)
T ss_dssp CSC-CHHHH-HHHHHHHHHHSCCEEEEECSSTTHHHHHHSSE
T ss_pred Eec-CHHHH-HHHHHHHHhcCCEEEEEECChHhHHHHHhCCE
Confidence 543 45432 23444444457889999999999 444443
No 140
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=98.03 E-value=8.7e-06 Score=72.86 Aligned_cols=57 Identities=19% Similarity=0.188 Sum_probs=48.6
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
+|+|+||+||||. +.+..+.+...++++++++. |++++++|+++ ...+..+.+.+|+
T Consensus 4 ikli~~DlDGTLl-~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~--------~~~~~~~~~~l~~ 60 (288)
T 1nrw_A 4 MKLIAIDLDGTLL-NSKHQVSLENENALRQAQRD-GIEVVVSTGRA--------HFDVMSIFEPLGI 60 (288)
T ss_dssp CCEEEEECCCCCS-CTTSCCCHHHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHGGGTC
T ss_pred eEEEEEeCCCCCC-CCCCccCHHHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHHcCC
Confidence 7999999999999 55567888999999999987 99999999987 6667777777765
No 141
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=97.99 E-value=8.5e-06 Score=72.31 Aligned_cols=56 Identities=23% Similarity=0.150 Sum_probs=48.3
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
||+|+||+||||. +....+.+...++|++ ++. |++++|+|+++ ...+..+.+.+|+
T Consensus 2 ikli~~DlDGTLl-~~~~~i~~~~~~al~~-~~~-Gi~v~iaTGR~--------~~~~~~~~~~l~~ 57 (268)
T 1nf2_A 2 YRVFVFDLDGTLL-NDNLEISEKDRRNIEK-LSR-KCYVVFASGRM--------LVSTLNVEKKYFK 57 (268)
T ss_dssp BCEEEEECCCCCS-CTTSCCCHHHHHHHHH-HTT-TSEEEEECSSC--------HHHHHHHHHHHSS
T ss_pred ccEEEEeCCCcCC-CCCCccCHHHHHHHHH-HhC-CCEEEEECCCC--------hHHHHHHHHHhCC
Confidence 6899999999999 5556788999999999 876 99999999997 6677778888876
No 142
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=97.95 E-value=9.4e-06 Score=74.09 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=48.8
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHH--HHcC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE--GKIG 248 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~l--k~LG 248 (299)
+.||+|++|+||||....+..+.+...++|++|++. |++++|+|+++ ...+..+. +.++
T Consensus 25 M~ikli~~DlDGTLl~~~~~~is~~~~~al~~l~~~-Gi~v~iaTGR~--------~~~~~~~~~~~~l~ 85 (301)
T 2b30_A 25 ADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEK-GYMVSICTGRS--------KVGILSAFGEENLK 85 (301)
T ss_dssp CCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHH-TCEEEEECSSC--------HHHHHHHHCHHHHH
T ss_pred ccccEEEEECCCCCcCCCCCccCHHHHHHHHHHHHC-CCEEEEEcCCC--------HHHHHHHhhHHhhc
Confidence 358999999999999431567899999999999998 99999999997 66666666 6555
No 143
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=97.92 E-value=7.1e-06 Score=72.35 Aligned_cols=55 Identities=22% Similarity=0.371 Sum_probs=45.7
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
||+|++|+||||. . ...+ +...++|++|++. |++++|+|+++ ...+..+.+.+|+
T Consensus 2 ikli~~DlDGTLl-~-~~~~-~~~~~~l~~l~~~-g~~~~i~Tgr~--------~~~~~~~~~~~~~ 56 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P-GYEP-DPAKPIIEELKDM-GFEIIFNSSKT--------RAEQEYYRKELEV 56 (249)
T ss_dssp EEEEEECCSTTTC-T-TSCS-GGGHHHHHHHHHT-TEEEEEBCSSC--------HHHHHHHHHHHTC
T ss_pred ccEEEEeCCCCcc-C-CCCc-HHHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHHcCC
Confidence 6899999999999 4 3334 4589999999997 99999999997 6777778888776
No 144
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=97.88 E-value=9.5e-06 Score=71.99 Aligned_cols=45 Identities=24% Similarity=0.239 Sum_probs=38.6
Q ss_pred CCcEEEEeccCeeecCCCcccCch-HHHHHHHHHHhCCCcEEEEeCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGP-LSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pg-v~e~L~~Lke~fGikVaIVSNna 228 (299)
.+|+|++|+||||. +.+..+.+. ..++|+++++. |++++|+|+++
T Consensus 2 ~~kli~~DlDGTLl-~~~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~ 47 (271)
T 1rlm_A 2 AVKVIVTDMDGTFL-NDAKTYNQPRFMAQYQELKKR-GIKFVVASGNQ 47 (271)
T ss_dssp CCCEEEECCCCCCS-CTTSCCCHHHHHHHHHHHHHH-TCEEEEECSSC
T ss_pred CccEEEEeCCCCCC-CCCCcCCHHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 47999999999999 445567777 48999999997 99999999886
No 145
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=97.83 E-value=1.3e-05 Score=70.53 Aligned_cols=55 Identities=16% Similarity=0.034 Sum_probs=44.7
Q ss_pred CcEEEEeccCeeecC----CCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHc
Q 022336 183 FKGVVFDKDNTLTAP----YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI 247 (299)
Q Consensus 183 IRaLVlD~DNTLT~p----~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~L 247 (299)
||+|++|+||||... ....+.+...++|++|++. | +++|+|+++ ...+..+.+.+
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~--------~~~~~~~~~~l 59 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRS--------PEEISRFLPLD 59 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSC--------HHHHHHHSCSS
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCC--------HHHHHHHhccc
Confidence 689999999999942 2346889999999999998 9 999999997 66666666655
No 146
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.80 E-value=2.7e-05 Score=69.44 Aligned_cols=45 Identities=24% Similarity=0.307 Sum_probs=41.0
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
.+|+|++|+||||+ +.+..+.+...++|+++++. |++++|+|+++
T Consensus 3 ~~kli~~DlDGTLl-~~~~~i~~~~~~~l~~l~~~-g~~~~iaTGR~ 47 (246)
T 3f9r_A 3 KRVLLLFDVDGTLT-PPRLCQTDEMRALIKRARGA-GFCVGTVGGSD 47 (246)
T ss_dssp CSEEEEECSBTTTB-STTSCCCHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CceEEEEeCcCCcC-CCCCccCHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 58999999999999 55667889999999999997 99999999997
No 147
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=97.77 E-value=5.1e-05 Score=62.93 Aligned_cols=66 Identities=9% Similarity=-0.016 Sum_probs=39.9
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHH-HHHHcCC----cEEEccCCCCHHHHHHHHHHhCCCCCc
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARK-LEGKIGI----KVIRHRVKKPAGTAEEIEKHFGCQSSQ 276 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~-~lk~LGI----~vI~ha~KKP~p~le~alk~lGi~PeE 276 (299)
+.||+.+.|+.|++ +++++|+||+... ......... +.+.++. ..+..+.+ . . .++
T Consensus 70 ~~pg~~e~L~~L~~--~~~~~i~T~~~~~---~~~~~~~~~~l~~~f~~~~~~~~i~~~~~----~------~----l~~ 130 (180)
T 3bwv_A 70 VMPHAQEVVKQLNE--HYDIYIATAAMDV---PTSFHDKYEWLLEYFPFLDPQHFVFCGRK----N------I----ILA 130 (180)
T ss_dssp BCTTHHHHHHHHTT--TSEEEEEECC--C---CSHHHHHHHHHHHHCTTSCGGGEEECSCG----G------G----BCC
T ss_pred CCcCHHHHHHHHHh--cCCEEEEeCCCCc---chHHHHHHHHHHHHcCCCCcccEEEeCCc----C------e----ecc
Confidence 46888899999887 5999999998310 011122233 3344553 23333321 0 1 178
Q ss_pred EEEEcCCccc
Q 022336 277 LIMVDMCRIV 286 (299)
Q Consensus 277 iamVGDrl~D 286 (299)
|+||||+..+
T Consensus 131 ~l~ieDs~~~ 140 (180)
T 3bwv_A 131 DYLIDDNPKQ 140 (180)
T ss_dssp SEEEESCHHH
T ss_pred cEEecCCcch
Confidence 9999999998
No 148
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=97.73 E-value=8.7e-06 Score=72.51 Aligned_cols=103 Identities=12% Similarity=0.052 Sum_probs=75.3
Q ss_pred cCCcEEEEeccCeeecCC-------CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc--E
Q 022336 181 RGFKGVVFDKDNTLTAPY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--V 251 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~-------~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~--v 251 (299)
.+-+.||+|+|+||.... ....-|++.++|+.+.+ ++.|+|.|.+. ...|+.+++.++.. +
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~~--~yeivI~Tas~--------~~ya~~vl~~LDp~~~~ 101 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLSQ--YYEIVLFSSNY--------MMYSDKIAEKLDPIHAF 101 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHTT--TEEEEEECSSC--------HHHHHHHHHHTSTTCSS
T ss_pred CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHHh--CCEEEEEcCCc--------HHHHHHHHHHhCCCCCe
Confidence 567899999999998311 23457999999999985 69999999987 78999999999863 2
Q ss_pred EE-----ccCCCCHHHHHHHHHHhCCCCCcEEEEcCCcccc--ccccee
Q 022336 252 IR-----HRVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVI--FPGPVV 293 (299)
Q Consensus 252 I~-----ha~KKP~p~le~alk~lGi~PeEiamVGDrl~DI--~gAn~~ 293 (299)
+. ..+....+.+.+.++.+|.++++|++|.|+..-+ ...|.|
T Consensus 102 f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I 150 (204)
T 3qle_A 102 VSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAI 150 (204)
T ss_dssp EEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEE
T ss_pred EEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCce
Confidence 22 1222111224456677899999999999998874 334544
No 149
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=97.54 E-value=8.1e-05 Score=65.01 Aligned_cols=46 Identities=22% Similarity=0.229 Sum_probs=39.5
Q ss_pred HcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
++++|+|++|+||||. ..+..+.+...++|++|++. ++++|+|+++
T Consensus 3 ~~~~kli~~DlDGTLl-~~~~~i~~~~~~al~~l~~~--i~v~iaTGR~ 48 (246)
T 2amy_A 3 APGPALCLFDVDGTLT-APRQKITKEMDDFLQKLRQK--IKIGVVGGSD 48 (246)
T ss_dssp -CCSEEEEEESBTTTB-CTTSCCCHHHHHHHHHHTTT--SEEEEECSSC
T ss_pred CCCceEEEEECCCCcC-CCCcccCHHHHHHHHHHHhC--CeEEEEcCCC
Confidence 4678999999999999 44557889999999999874 8999999986
No 150
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=97.51 E-value=8e-05 Score=65.32 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=37.9
Q ss_pred cEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 184 RaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
|+|+||+||||.......+.+...++|+++++. |+.++++|+++
T Consensus 3 kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~ 46 (261)
T 2rbk_A 3 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAK-GLKIFIATGRP 46 (261)
T ss_dssp CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred cEEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHC-CCEEEEECCCh
Confidence 899999999999444333889999999999997 99999999986
No 151
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=97.35 E-value=0.00018 Score=63.78 Aligned_cols=47 Identities=26% Similarity=0.300 Sum_probs=37.9
Q ss_pred HHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+...+|.|++|+||||. ..+..+.+...++|++|++. +.++|+|+++
T Consensus 9 ~~~~~kli~~DlDGTLl-~~~~~is~~~~~al~~l~~~--i~v~iaTGR~ 55 (262)
T 2fue_A 9 RRKERVLCLFDVDGTLT-PARQKIDPEVAAFLQKLRSR--VQIGVVGGSD 55 (262)
T ss_dssp ----CEEEEEESBTTTB-STTSCCCHHHHHHHHHHTTT--SEEEEECSSC
T ss_pred cccCeEEEEEeCccCCC-CCCCcCCHHHHHHHHHHHhC--CEEEEEcCCC
Confidence 34578999999999999 44557889999999999763 8999999886
No 152
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=97.32 E-value=9.1e-05 Score=71.39 Aligned_cols=102 Identities=15% Similarity=0.256 Sum_probs=72.2
Q ss_pred CHHHHHHcCCcEEEEeccCeeecC-----------------CC----------------------cccCchHHHHHHHHH
Q 022336 174 DWAELQRRGFKGVVFDKDNTLTAP-----------------YS----------------------LTLWGPLSSSIEQCK 214 (299)
Q Consensus 174 d~~~Lk~~GIRaLVlD~DNTLT~p-----------------~~----------------------~~l~Pgv~e~L~~Lk 214 (299)
+-..|...+.+++|||+|+||.-- ++ +..-|++.++|+++.
T Consensus 9 ~~~rl~~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~ 88 (372)
T 3ef0_A 9 NVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS 88 (372)
T ss_dssp HHHHHHHHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh
Confidence 346788899999999999999721 00 112589999999998
Q ss_pred HhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE--EEc----cCCCCHHHHHHHHHH-hCCCCCcEEEEcCCccc
Q 022336 215 SVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV--IRH----RVKKPAGTAEEIEKH-FGCQSSQLIMVDMCRIV 286 (299)
Q Consensus 215 e~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v--I~h----a~KKP~p~le~alk~-lGi~PeEiamVGDrl~D 286 (299)
+ ++.|+|.|.+. ...|..+++.++... +.+ ...-+ ..+.+.+.. +|.++++|++|.|+..-
T Consensus 89 ~--~yeivI~Tas~--------~~yA~~vl~~LDp~~~~f~~ri~sr~~~g-~~~~KdL~~L~~~dl~~viiiDd~~~~ 156 (372)
T 3ef0_A 89 E--LYELHIYTMGT--------KAYAKEVAKIIDPTGKLFQDRVLSRDDSG-SLAQKSLRRLFPCDTSMVVVIDDRGDV 156 (372)
T ss_dssp T--TEEEEEECSSC--------HHHHHHHHHHHCTTSCSSSSCEECTTTSS-CSSCCCGGGTCSSCCTTEEEEESCSGG
T ss_pred c--CcEEEEEeCCc--------HHHHHHHHHHhccCCceeeeEEEEecCCC-CcceecHHHhcCCCCceEEEEeCCHHH
Confidence 5 68999999997 788999999987532 111 10001 012233444 49999999999998754
No 153
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=97.13 E-value=0.0018 Score=68.84 Aligned_cols=82 Identities=15% Similarity=0.131 Sum_probs=58.4
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE----------------------------
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV---------------------------- 251 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v---------------------------- 251 (299)
..+.|++.+.+++|+++ |++++++|+.. ...+..+++++|+..
T Consensus 602 D~lr~~~~~~I~~l~~~-Gi~v~miTGD~--------~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~ 672 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDA-GIRVIMITGDN--------KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACR 672 (995)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEESSC--------HHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHc-CCEEEEECCCC--------HHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHh
Confidence 34678999999999997 99999999987 788999999999831
Q ss_pred ---EEccCCCCHHHHHHHHHHhCCCCCcEEEEcCCccc---ccccce
Q 022336 252 ---IRHRVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIV---IFPGPV 292 (299)
Q Consensus 252 ---I~ha~KKP~p~le~alk~lGi~PeEiamVGDrl~D---I~gAn~ 292 (299)
++.. -.|... .++++.+.-..+.++||||..+| +..|..
T Consensus 673 ~~~v~~r-~~P~~K-~~~v~~l~~~g~~v~~~GDG~ND~~alk~Adv 717 (995)
T 3ar4_A 673 RACCFAR-VEPSHK-SKIVEYLQSYDEITAMTGDGVNDAPALKKAEI 717 (995)
T ss_dssp HCCEEES-CCSSHH-HHHHHHHHTTTCCEEEEECSGGGHHHHHHSTE
T ss_pred hCcEEEE-eCHHHH-HHHHHHHHHCCCEEEEEcCCchhHHHHHHCCe
Confidence 1111 123321 23334443345889999999999 444544
No 154
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=96.99 E-value=0.0035 Score=67.07 Aligned_cols=41 Identities=15% Similarity=0.384 Sum_probs=36.4
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
.+.|++.+++++|+++ |+++.++|+.. ...+..+++.+|+.
T Consensus 599 plr~~~~~aI~~l~~a-GI~v~miTGD~--------~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSA-GIKVIMVTGDH--------PITAKAIAKGVGII 639 (1028)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEECSSC--------HHHHHHHHHHHTSS
T ss_pred CCChhHHHHHHHHHHc-CCEEEEECCCC--------HHHHHHHHHHcCCC
Confidence 4678999999999997 99999999987 77888999999874
No 155
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=96.89 E-value=0.0026 Score=67.67 Aligned_cols=105 Identities=17% Similarity=0.184 Sum_probs=72.0
Q ss_pred HHHHHcCCcEEEEeccC-----eeec--CCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcC
Q 022336 176 AELQRRGFKGVVFDKDN-----TLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DN-----TLT~--p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LG 248 (299)
+.+.+.|.|+|.+=.+. ++.. .-...+-|++.+++++|+++ |+++.++|+-. ...+..+++++|
T Consensus 503 ~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~a-GI~v~MiTGD~--------~~TA~aIA~~lG 573 (920)
T 1mhs_A 503 AEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTL-GLSIKMLTGDA--------VGIARETSRQLG 573 (920)
T ss_dssp HHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHH-TCEEEEEESSC--------HHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhc-CceEEEEcCCC--------HHHHHHHHHHcC
Confidence 34566899988876442 3321 12345778999999999998 99999999987 778999999999
Q ss_pred CcE-----------------------------EEccCCCCHH--HHHHHHHHhCCCCCcEEEEcCCccc---cccccee
Q 022336 249 IKV-----------------------------IRHRVKKPAG--TAEEIEKHFGCQSSQLIMVDMCRIV---IFPGPVV 293 (299)
Q Consensus 249 I~v-----------------------------I~ha~KKP~p--~le~alk~lGi~PeEiamVGDrl~D---I~gAn~~ 293 (299)
+.. ++.. -.|.. .+-+.++..| +.++|+||..+| +..|..=
T Consensus 574 I~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~ar-v~P~~K~~iV~~Lq~~g---~~Vam~GDGvNDapaLk~AdvG 648 (920)
T 1mhs_A 574 LGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAE-VFPQHKYNVVEILQQRG---YLVAMTGDGVNDAPSLKKADTG 648 (920)
T ss_dssp SSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEES-CCSTHHHHHHHHHHTTT---CCCEECCCCGGGHHHHHHSSEE
T ss_pred CCccccCccceeecCcccCCHHHHHHHHhhCeEEEE-eCHHHHHHHHHHHHhCC---CeEEEEcCCcccHHHHHhCCcC
Confidence 841 1222 23432 2333444333 789999999999 4445443
No 156
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=96.81 E-value=0.00051 Score=60.30 Aligned_cols=52 Identities=21% Similarity=0.234 Sum_probs=36.9
Q ss_pred EEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcC
Q 022336 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (299)
Q Consensus 185 aLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LG 248 (299)
.|++|+||||.... ..+ +...++|++++ . |++++|+|+++ ...+..+.+.++
T Consensus 5 li~~DlDGTLl~~~-~~~-~~~~~~l~~~~-~-gi~v~iaTGR~--------~~~~~~~~~~l~ 56 (244)
T 1s2o_A 5 LLISDLDNTWVGDQ-QAL-EHLQEYLGDRR-G-NFYLAYATGRS--------YHSARELQKQVG 56 (244)
T ss_dssp EEEECTBTTTBSCH-HHH-HHHHHHHHTTG-G-GEEEEEECSSC--------HHHHHHHHHHHT
T ss_pred EEEEeCCCCCcCCH-HHH-HHHHHHHHHhc-C-CCEEEEEcCCC--------HHHHHHHHHHcC
Confidence 89999999999432 222 56667777754 4 78999999987 556666666544
No 157
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=96.65 E-value=0.0013 Score=62.13 Aligned_cols=97 Identities=21% Similarity=0.139 Sum_probs=69.9
Q ss_pred cCCcEEEEeccCeeecCCC------cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc----
Q 022336 181 RGFKGVVFDKDNTLTAPYS------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---- 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~------~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~---- 250 (299)
.|-+.||||+|+||..... ...-|++.++|+.+.+ .+.|+|.|.+. ...|..+++.|+..
T Consensus 138 ~~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~~--~yeivIfTas~--------~~ya~~vld~Ld~~~~~~ 207 (320)
T 3shq_A 138 EGKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAYE--DYDIVIWSATS--------MRWIEEKMRLLGVASNDN 207 (320)
T ss_dssp TTCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHHH--HEEEEEECSSC--------HHHHHHHHHHTTCTTCSS
T ss_pred CCCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHHh--CCEEEEEcCCc--------HHHHHHHHHHhCCCCCcc
Confidence 4779999999999993221 1246899999999997 48999999997 78899999988642
Q ss_pred ----EEEccCC------CCHH-HHHHHHHHh-----CCCCCcEEEEcCCcccc
Q 022336 251 ----VIRHRVK------KPAG-TAEEIEKHF-----GCQSSQLIMVDMCRIVI 287 (299)
Q Consensus 251 ----vI~ha~K------KP~p-~le~alk~l-----Gi~PeEiamVGDrl~DI 287 (299)
.++..+. +..+ .+.+-+..+ |-+++++++|.|+..-.
T Consensus 208 ~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~ 260 (320)
T 3shq_A 208 YKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNF 260 (320)
T ss_dssp CCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGG
T ss_pred eeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHh
Confidence 2333221 1222 123344555 88999999999988763
No 158
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=96.51 E-value=0.0021 Score=56.22 Aligned_cols=36 Identities=17% Similarity=0.059 Sum_probs=29.7
Q ss_pred CCCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccce
Q 022336 257 KKPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGPV 292 (299)
Q Consensus 257 KKP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn~ 292 (299)
.+|.+ +++.+++++|++++++++|||+.+|+.+++.
T Consensus 185 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ 221 (261)
T 2rbk_A 185 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRH 221 (261)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence 34554 5889999999999999999999999766543
No 159
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=96.32 E-value=0.0043 Score=65.69 Aligned_cols=98 Identities=8% Similarity=0.066 Sum_probs=67.4
Q ss_pred HHHHHcCCcEEEEecc-------------Ceeec--CCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHH
Q 022336 176 AELQRRGFKGVVFDKD-------------NTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA 240 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~D-------------NTLT~--p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a 240 (299)
+.+.+.|.|++.+=.+ .++.. .-...+-|++.+++++|+++ |+++.++|+.. ...+
T Consensus 448 ~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~a-GI~v~MiTGD~--------~~tA 518 (885)
T 3b8c_A 448 DKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNL-GVNVKMITGDQ--------LAIG 518 (885)
T ss_dssp HHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHT-TCCCEEEESSC--------HHHH
T ss_pred HHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHc-CCcEEEEcCCC--------hHHH
Confidence 3455689999888654 12210 01234678999999999997 99999999876 6788
Q ss_pred HHHHHHcCCcE------------------------------EEccCCCCHH--HHHHHHHHhCCCCCcEEEEcCCccc
Q 022336 241 RKLEGKIGIKV------------------------------IRHRVKKPAG--TAEEIEKHFGCQSSQLIMVDMCRIV 286 (299)
Q Consensus 241 ~~~lk~LGI~v------------------------------I~ha~KKP~p--~le~alk~lGi~PeEiamVGDrl~D 286 (299)
..+++++|+.. ++ +.-.|.. .+-+.++..| +.++|+||..+|
T Consensus 519 ~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~-arv~P~~K~~iV~~lq~~g---~~Vam~GDGvND 592 (885)
T 3b8c_A 519 KETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGF-AGVFPEHKYEIVKKLQERK---HIVGMTGDGVND 592 (885)
T ss_dssp THHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCE-ECCCHHHHHHHHHHHHHTT---CCCCBCCCSSTT
T ss_pred HHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEE-EEECHHHHHHHHHHHHHCC---CeEEEEcCCchh
Confidence 99999999831 11 1223432 1333444444 789999999999
No 160
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=96.04 E-value=0.004 Score=54.97 Aligned_cols=34 Identities=3% Similarity=-0.107 Sum_probs=28.6
Q ss_pred CCHH-HHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 258 KPAG-TAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 258 KP~p-~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
++.+ +++.+++++|++++++++|||+.+|+..++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~ 224 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLK 224 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHH
Confidence 4444 589999999999999999999999966544
No 161
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=96.03 E-value=0.01 Score=59.06 Aligned_cols=80 Identities=16% Similarity=0.249 Sum_probs=57.6
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHH-c------C------CcEEEccCCCCH---------
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-I------G------IKVIRHRVKKPA--------- 260 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~-L------G------I~vI~ha~KKP~--------- 260 (299)
.|++..+|+++++. |.++.++||+. ..-+..++.. + | .++|.-..+||.
T Consensus 188 ~~~l~~~L~~lr~~-GKklFLiTNS~--------~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~ 258 (470)
T 4g63_A 188 EKEVVEGLKHFIRY-GKKIFILTNSE--------YSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFL 258 (470)
T ss_dssp CHHHHHHHHHHHTT-TCEEEEECSSC--------HHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEE
T ss_pred CHhHHHHHHHHHHc-CCeEEEeeCCC--------chHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcce
Confidence 47889999999997 99999999998 6666666654 3 2 122222223332
Q ss_pred ----------------------HH-HHHHHHHhCCCCCcEEEEcCCccc-ccccc
Q 022336 261 ----------------------GT-AEEIEKHFGCQSSQLIMVDMCRIV-IFPGP 291 (299)
Q Consensus 261 ----------------------p~-le~alk~lGi~PeEiamVGDrl~D-I~gAn 291 (299)
.| +..+.+.+|..-.+|+||||.++. |..++
T Consensus 259 ~v~~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~k 313 (470)
T 4g63_A 259 SVNPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLK 313 (470)
T ss_dssp EECTTTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHH
T ss_pred EEECCCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhh
Confidence 12 677888889999999999999987 75544
No 162
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=95.84 E-value=0.032 Score=59.71 Aligned_cols=41 Identities=12% Similarity=0.362 Sum_probs=35.3
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
..+.|++.+++++|+++ |++++++|+.. ...+..+++.+|+
T Consensus 603 Dp~r~~~~~aI~~l~~a-GI~vvmiTGd~--------~~tA~~ia~~lgi 643 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTA-GIRVIMVTGDH--------PITAKAIAASVGI 643 (1034)
T ss_pred CCCchhHHHHHHHHHHc-CCeEEEEeCCC--------HHHHHHHHHHcCC
Confidence 35678999999999997 99999999987 6778888888876
No 163
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=95.41 E-value=0.0049 Score=59.15 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=37.4
Q ss_pred CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
...++|+..+.++.|++. |++++|||.+. ...++.+++.+|+
T Consensus 219 gir~~p~~~eLi~~L~~~-G~~v~IVSgg~--------~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEEN-GIDCYIVSASF--------IDIVRAFATDTNN 260 (385)
T ss_dssp CCEECHHHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHHCTTS
T ss_pred CceeCHHHHHHHHHHHHC-CCeEEEEcCCc--------HHHHHHHHHHhCc
Confidence 445899999999999997 99999999997 7889999998864
No 164
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=95.38 E-value=0.012 Score=55.72 Aligned_cols=21 Identities=14% Similarity=-0.026 Sum_probs=18.0
Q ss_pred CCCcEEEEcCCcc-ccccccee
Q 022336 273 QSSQLIMVDMCRI-VIFPGPVV 293 (299)
Q Consensus 273 ~PeEiamVGDrl~-DI~gAn~~ 293 (299)
++++++||||++. ||.||+.+
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~a 310 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNY 310 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHHHHc
Confidence 6799999999995 79998753
No 165
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=94.67 E-value=0.008 Score=51.27 Aligned_cols=38 Identities=16% Similarity=-0.125 Sum_probs=26.0
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcE
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDI 221 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikV 221 (299)
.+|+|+||+||||. +....+.+...++++.+++. |+.+
T Consensus 12 ~~k~iifDlDGTL~-d~~~~~~~~~~~~~~~l~~~-g~~~ 49 (251)
T 2pke_A 12 AIQLVGFDGDDTLW-KSEDYYRTAEADFEAILSGY-LDLG 49 (251)
T ss_dssp SCCEEEECCBTTTB-CCHHHHHHHHHHHHHHHTTT-CCC-
T ss_pred ceeEEEEeCCCCCc-cCcHhHHHHHHHHHHHHHHh-CCch
Confidence 58999999999999 44433444555566666664 8775
No 166
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=94.17 E-value=0.015 Score=48.12 Aligned_cols=14 Identities=43% Similarity=0.430 Sum_probs=13.0
Q ss_pred CCcEEEEeccCeee
Q 022336 182 GFKGVVFDKDNTLT 195 (299)
Q Consensus 182 GIRaLVlD~DNTLT 195 (299)
.+|+|+||+||||.
T Consensus 3 ~~k~iifDlDGTL~ 16 (234)
T 2hcf_A 3 SRTLVLFDIDGTLL 16 (234)
T ss_dssp CCEEEEECCBTTTE
T ss_pred cceEEEEcCCCCcc
Confidence 47999999999999
No 167
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=93.67 E-value=0.13 Score=46.49 Aligned_cols=29 Identities=17% Similarity=0.128 Sum_probs=25.8
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCccccccc
Q 022336 262 TAEEIEKHFGCQSSQLIMVDMCRIVIFPG 290 (299)
Q Consensus 262 ~le~alk~lGi~PeEiamVGDrl~DI~gA 290 (299)
+++.+++++|++++++++|||+.+|+..+
T Consensus 228 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~ 256 (301)
T 2b30_A 228 GINYLLKHYNISNDQVLVVGDAENDIAML 256 (301)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 58899999999999999999999996543
No 168
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=93.54 E-value=0.017 Score=46.23 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=12.6
Q ss_pred CCcEEEEeccCeee
Q 022336 182 GFKGVVFDKDNTLT 195 (299)
Q Consensus 182 GIRaLVlD~DNTLT 195 (299)
.+|+|+||+||||.
T Consensus 3 ~~k~i~fDlDGTL~ 16 (207)
T 2go7_A 3 QKTAFIWDLDGTLL 16 (207)
T ss_dssp -CCEEEECTBTTTE
T ss_pred cccEEEEeCCCccc
Confidence 47999999999999
No 169
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=93.49 E-value=0.017 Score=50.82 Aligned_cols=30 Identities=3% Similarity=0.054 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 262 TAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 262 ~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
+++.+++++|++++++++|||+.+|+.+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~ 223 (268)
T 1nf2_A 194 ALRFLRERMNWKKEEIVVFGDNENDLFMFE 223 (268)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHeEEEcCchhhHHHHH
Confidence 588999999999999999999999965544
No 170
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=93.48 E-value=0.048 Score=53.81 Aligned_cols=101 Identities=15% Similarity=0.248 Sum_probs=70.5
Q ss_pred CCHHHHHHcCCcEEEEeccCeeec----C------------C-C----------------------cccCchHHHHHHHH
Q 022336 173 IDWAELQRRGFKGVVFDKDNTLTA----P------------Y-S----------------------LTLWGPLSSSIEQC 213 (299)
Q Consensus 173 Id~~~Lk~~GIRaLVlD~DNTLT~----p------------~-~----------------------~~l~Pgv~e~L~~L 213 (299)
.+...|...+-..||+|+|.||.- + . + +..-|++.++|+++
T Consensus 16 ~~~~rll~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~l 95 (442)
T 3ef1_A 16 ENVKRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKI 95 (442)
T ss_dssp HHHHHHHHTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHH
Confidence 345667788899999999999861 1 0 0 11248999999999
Q ss_pred HHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc-------EE-EccCCCCHHHHHHHHH-HhCCCCCcEEEEcCCc
Q 022336 214 KSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-------VI-RHRVKKPAGTAEEIEK-HFGCQSSQLIMVDMCR 284 (299)
Q Consensus 214 ke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~-------vI-~ha~KKP~p~le~alk-~lGi~PeEiamVGDrl 284 (299)
.+ ++.|+|.|.+. ...|..+++.|+.. .+ +..+.. .+.+-+. .+|.+.+.+++|.|+.
T Consensus 96 s~--~yEivIfTas~--------~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~---~~~KdL~~ll~rdl~~vvIIDd~p 162 (442)
T 3ef1_A 96 SE--LYELHIYTMGT--------KAYAKEVAKIIDPTGKLFQDRVLSRDDSGS---LAQKSLRRLFPCDTSMVVVIDDRG 162 (442)
T ss_dssp TT--TEEEEEECSSC--------HHHHHHHHHHHCTTSTTTTTCEECTTTSSC---SSCCCGGGTCSSCCTTEEEEESCS
T ss_pred hC--CcEEEEEcCCC--------HHHHHHHHHHhccCCccccceEEEecCCCC---ceeeehHHhcCCCcceEEEEECCH
Confidence 86 68999999997 78899999988642 12 222211 0111223 3589999999999987
Q ss_pred cc
Q 022336 285 IV 286 (299)
Q Consensus 285 ~D 286 (299)
.-
T Consensus 163 ~~ 164 (442)
T 3ef1_A 163 DV 164 (442)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 171
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=93.06 E-value=0.023 Score=46.38 Aligned_cols=14 Identities=29% Similarity=0.456 Sum_probs=13.1
Q ss_pred CCcEEEEeccCeee
Q 022336 182 GFKGVVFDKDNTLT 195 (299)
Q Consensus 182 GIRaLVlD~DNTLT 195 (299)
.+|+|+||+||||+
T Consensus 8 ~~k~i~fDlDGTL~ 21 (226)
T 1te2_A 8 QILAAIFDMDGLLI 21 (226)
T ss_dssp CCCEEEECCBTTTB
T ss_pred CCCEEEECCCCCcC
Confidence 48999999999999
No 172
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=92.78 E-value=0.033 Score=49.46 Aligned_cols=30 Identities=7% Similarity=-0.144 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 262 TAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 262 ~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
+++.+++++|++++++++|||+.+|+..++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~ 249 (288)
T 1nrw_A 220 ALKRLAKQLNIPLEETAAVGDSLNDKSMLE 249 (288)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSGGGHHHHH
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHH
Confidence 588999999999999999999999965543
No 173
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=92.78 E-value=0.02 Score=46.85 Aligned_cols=13 Identities=54% Similarity=0.920 Sum_probs=12.5
Q ss_pred CcEEEEeccCeee
Q 022336 183 FKGVVFDKDNTLT 195 (299)
Q Consensus 183 IRaLVlD~DNTLT 195 (299)
+|+|+||+||||.
T Consensus 2 ~k~i~fDlDGTL~ 14 (221)
T 2wf7_A 2 FKAVLFDLDGVIT 14 (221)
T ss_dssp CCEEEECCBTTTB
T ss_pred CcEEEECCCCccc
Confidence 7999999999999
No 174
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=92.49 E-value=0.039 Score=49.02 Aligned_cols=30 Identities=7% Similarity=0.051 Sum_probs=26.4
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 262 TAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 262 ~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
+++.+++++|++++++++|||+.+|+..++
T Consensus 202 ~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~ 231 (282)
T 1rkq_A 202 GVKSLADVLGIKPEEIMAIGDQENDIAMIE 231 (282)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred HHHHHHHHhCCCHHHEEEECCcHHHHHHHH
Confidence 588999999999999999999999965443
No 175
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=92.42 E-value=0.027 Score=46.37 Aligned_cols=13 Identities=54% Similarity=0.414 Sum_probs=12.6
Q ss_pred CcEEEEeccCeee
Q 022336 183 FKGVVFDKDNTLT 195 (299)
Q Consensus 183 IRaLVlD~DNTLT 195 (299)
+|+|+||+||||.
T Consensus 4 ~k~i~fDlDGTL~ 16 (235)
T 2om6_A 4 VKLVTFDVWNTLL 16 (235)
T ss_dssp CCEEEECCBTTTB
T ss_pred ceEEEEeCCCCCC
Confidence 7999999999999
No 176
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=92.38 E-value=0.048 Score=47.57 Aligned_cols=41 Identities=15% Similarity=0.141 Sum_probs=31.0
Q ss_pred cEEEccCCCCHHHHHHHHHHhCCCCCcEEEEcCCcccccccc
Q 022336 250 KVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVDMCRIVIFPGP 291 (299)
Q Consensus 250 ~vI~ha~KKP~p~le~alk~lGi~PeEiamVGDrl~DI~gAn 291 (299)
++...+..|+ .+++.+++++|++++++++|||+.+|+...+
T Consensus 155 ei~~~~~~K~-~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~ 195 (244)
T 1s2o_A 155 DLLPQRSNKG-NATQYLQQHLAMEPSQTLVCGDSGNDIGLFE 195 (244)
T ss_dssp EEEETTCSHH-HHHHHHHHHTTCCGGGEEEEECSGGGHHHHT
T ss_pred EeccCCCChH-HHHHHHHHHhCCCHHHEEEECCchhhHHHHh
Confidence 3444444444 3588999999999999999999999955443
No 177
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=92.36 E-value=0.04 Score=48.26 Aligned_cols=15 Identities=47% Similarity=0.658 Sum_probs=13.7
Q ss_pred cCCcEEEEeccCeee
Q 022336 181 RGFKGVVFDKDNTLT 195 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT 195 (299)
..+|+|+||+||||.
T Consensus 16 ~~~k~viFDlDGTLv 30 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLI 30 (260)
T ss_dssp CCCCEEEECCBTTTB
T ss_pred ccceEEEEcCCCCCC
Confidence 468999999999999
No 178
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=92.29 E-value=0.062 Score=45.07 Aligned_cols=14 Identities=43% Similarity=0.591 Sum_probs=13.0
Q ss_pred CCcEEEEeccCeee
Q 022336 182 GFKGVVFDKDNTLT 195 (299)
Q Consensus 182 GIRaLVlD~DNTLT 195 (299)
.+|+|+||+||||+
T Consensus 2 ~~k~viFDlDGTL~ 15 (220)
T 2zg6_A 2 KYKAVLVDFGNTLV 15 (220)
T ss_dssp CCCEEEECSBTTTE
T ss_pred CceEEEEcCCCcee
Confidence 47999999999998
No 179
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=92.28 E-value=0.07 Score=45.35 Aligned_cols=14 Identities=36% Similarity=0.721 Sum_probs=12.9
Q ss_pred CCcEEEEeccCeee
Q 022336 182 GFKGVVFDKDNTLT 195 (299)
Q Consensus 182 GIRaLVlD~DNTLT 195 (299)
.+|+|+||+||||+
T Consensus 3 ~~k~viFDlDGTL~ 16 (240)
T 2hi0_A 3 KYKAAIFDMDGTIL 16 (240)
T ss_dssp SCSEEEECSBTTTE
T ss_pred cccEEEEecCCCCc
Confidence 37999999999999
No 180
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=92.22 E-value=0.038 Score=46.70 Aligned_cols=13 Identities=46% Similarity=0.672 Sum_probs=12.4
Q ss_pred CcEEEEeccCeee
Q 022336 183 FKGVVFDKDNTLT 195 (299)
Q Consensus 183 IRaLVlD~DNTLT 195 (299)
+|+|+||+||||+
T Consensus 2 ~k~iiFDlDGTL~ 14 (241)
T 2hoq_A 2 VKVIFFDLDDTLV 14 (241)
T ss_dssp CCEEEECSBTTTB
T ss_pred ccEEEEcCCCCCC
Confidence 7899999999999
No 181
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=92.08 E-value=0.075 Score=43.28 Aligned_cols=15 Identities=20% Similarity=0.346 Sum_probs=13.4
Q ss_pred CCcEEEEeccCeeec
Q 022336 182 GFKGVVFDKDNTLTA 196 (299)
Q Consensus 182 GIRaLVlD~DNTLT~ 196 (299)
.+|+|+||+||||+.
T Consensus 3 ~~k~viFDlDGTL~d 17 (200)
T 3cnh_A 3 TIKALFWDIGGVLLT 17 (200)
T ss_dssp CCCEEEECCBTTTBC
T ss_pred CceEEEEeCCCeeEC
Confidence 489999999999993
No 182
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=91.85 E-value=0.044 Score=50.06 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=28.2
Q ss_pred ccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 201 ~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
.+.+++.+.++.|++ |+.++|+|++. ...+....+.+++
T Consensus 103 ~~~~~~~~~l~~l~~--g~~~~i~t~~~--------~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE--RWTPVVISTSY--------TQYLRRTASMIGV 141 (332)
T ss_dssp CBCTTHHHHHHHHHT--TCEEEEEEEEE--------HHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHc--CCcEEEEECCc--------eEEEcccchhhhh
Confidence 457888899988877 89999999875 3445555555665
No 183
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=91.52 E-value=0.016 Score=52.89 Aligned_cols=21 Identities=14% Similarity=-0.134 Sum_probs=16.8
Q ss_pred CCCCCc----EEEEcCCcccccccc
Q 022336 271 GCQSSQ----LIMVDMCRIVIFPGP 291 (299)
Q Consensus 271 Gi~PeE----iamVGDrl~DI~gAn 291 (299)
|+++++ |++|||+.+|+.+++
T Consensus 214 gi~~~~~~~~via~GDs~NDi~ml~ 238 (332)
T 1y8a_A 214 GYCESKGIDFPVVVGDSISDYKMFE 238 (332)
T ss_dssp HHHHHHTCSSCEEEECSGGGHHHHH
T ss_pred ccChhhcCceEEEEeCcHhHHHHHH
Confidence 667888 999999999965544
No 184
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=91.17 E-value=0.16 Score=45.24 Aligned_cols=19 Identities=37% Similarity=0.413 Sum_probs=15.3
Q ss_pred CCcEEEEeccCeeecCCCcc
Q 022336 182 GFKGVVFDKDNTLTAPYSLT 201 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~ 201 (299)
.+++|+||+||||| +....
T Consensus 31 ~i~~viFD~dGTL~-ds~~~ 49 (287)
T 3a1c_A 31 KVTAVIFDKTGTLT-KGKPE 49 (287)
T ss_dssp HCCEEEEECCCCCB-CSCCE
T ss_pred cCCEEEEeCCCCCc-CCCEE
Confidence 48999999999999 44433
No 185
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=87.66 E-value=0.16 Score=44.24 Aligned_cols=33 Identities=9% Similarity=-0.099 Sum_probs=26.9
Q ss_pred cCCCCHHHHHHHHHHhCC-CCCcEEEEcCCccccc
Q 022336 255 RVKKPAGTAEEIEKHFGC-QSSQLIMVDMCRIVIF 288 (299)
Q Consensus 255 a~KKP~p~le~alk~lGi-~PeEiamVGDrl~DI~ 288 (299)
+.-|. .+++.+++++|+ +++++++|||+.+|+.
T Consensus 177 g~sKg-~al~~l~~~~~~~~~~~viafGD~~NDi~ 210 (249)
T 2zos_A 177 NSDKG-KAAKILLDFYKRLGQIESYAVGDSYNDFP 210 (249)
T ss_dssp SCCHH-HHHHHHHHHHHTTSCEEEEEEECSGGGHH
T ss_pred CCChH-HHHHHHHHHhccCCCceEEEECCCcccHH
Confidence 44343 368899999998 9999999999999943
No 186
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=84.82 E-value=0.27 Score=43.31 Aligned_cols=14 Identities=21% Similarity=0.297 Sum_probs=13.2
Q ss_pred CCcEEEEeccCeee
Q 022336 182 GFKGVVFDKDNTLT 195 (299)
Q Consensus 182 GIRaLVlD~DNTLT 195 (299)
.||+|+||+||||+
T Consensus 9 ~ikaviFDlDGTL~ 22 (261)
T 1yns_A 9 EVTVILLDIEGTTT 22 (261)
T ss_dssp TCCEEEECCBTTTB
T ss_pred CCCEEEEecCCCcc
Confidence 58999999999999
No 187
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=82.99 E-value=0.22 Score=44.09 Aligned_cols=27 Identities=7% Similarity=-0.136 Sum_probs=24.5
Q ss_pred HHHHHHHHhC-CCCCc--EEEEcCCccccc
Q 022336 262 TAEEIEKHFG-CQSSQ--LIMVDMCRIVIF 288 (299)
Q Consensus 262 ~le~alk~lG-i~PeE--iamVGDrl~DI~ 288 (299)
+++.+++++| +++++ +++|||+.+|+.
T Consensus 193 ~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~ 222 (275)
T 1xvi_A 193 AANWIIATYQQLSGKRPTTLGLGDGPNDAP 222 (275)
T ss_dssp HHHHHHHHHHHHHSSCCEEEEEESSGGGHH
T ss_pred HHHHHHHHhhhcccccCcEEEECCChhhHH
Confidence 5889999999 99999 999999999953
No 188
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=83.28 E-value=0.25 Score=43.70 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=15.9
Q ss_pred cCCcEEEEeccCeeecCCCcc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLT 201 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~ 201 (299)
..+++|+||+||||| .+...
T Consensus 26 ~~i~~v~fDktGTLT-~g~~~ 45 (263)
T 2yj3_A 26 KEIDTIIFEKTGTLT-YGTPI 45 (263)
Confidence 469999999999999 44433
No 189
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=74.81 E-value=2.2 Score=39.93 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=37.1
Q ss_pred CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHH----cCCc
Q 022336 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK----IGIK 250 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~----LGI~ 250 (299)
...++|+..+.++.+++. |++|.|||.+. ...++.+++. +||+
T Consensus 141 ~~~~~~~~~~l~~~l~~~-G~~v~ivSas~--------~~~v~~~a~~~~~~ygIp 187 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMEN-GIEVYVISAAH--------EELVRMVAADPRYGYNAK 187 (327)
T ss_dssp CCEECHHHHHHHHHHHHT-TCEEEEEEEEE--------HHHHHHHHTCGGGSCCCC
T ss_pred ccccCHHHHHHHHHHHHC-CCEEEEEeCCc--------HHHHHHHHhhcccccCCC
Confidence 446899999999999997 99999999997 7889999887 4663
No 190
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=68.52 E-value=14 Score=32.13 Aligned_cols=52 Identities=12% Similarity=0.037 Sum_probs=33.9
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
.+.|++.||.+|++|.+- ..+....+ ..+...+.+.|.+. |. +|++++...+
T Consensus 99 ~~~l~~~~iPvV~i~~~~--~~~~~~~V~~D~~~~g~~a~~~L~~~-G~~~I~~i~~~~~ 155 (305)
T 3huu_A 99 EHLLNEFKVPYLIVGKSL--NYENIIHIDNDNIDAAYQLTQYLYHL-GHRHILFLQESGH 155 (305)
T ss_dssp HHHHHHTTCCEEEESCCC--SSTTCCEEECCHHHHHHHHHHHHHHT-TCCSEEEEEESSC
T ss_pred HHHHHHcCCCEEEECCCC--cccCCcEEEeCHHHHHHHHHHHHHHC-CCCeEEEEcCCcc
Confidence 466788999999998764 21111122 23455667777776 76 6999987653
No 191
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=68.24 E-value=3.4 Score=35.27 Aligned_cols=112 Identities=17% Similarity=0.105 Sum_probs=77.7
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCC-CC---cc-HHHHHHHHHHcCCc
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE-YD---ND-ASKARKLEGKIGIK 250 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~-~d---~~-~e~a~~~lk~LGI~ 250 (299)
+.|++.|++...-+.|..+.......++|++.+.++.|+ . |+++ |+||+.-... .. .. ......+...++..
T Consensus 101 ~~l~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~-~-g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~ 177 (264)
T 1yv9_A 101 DLILEAGFEWDETNPDYVVVGLDTELSYEKVVLATLAIQ-K-GALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTK 177 (264)
T ss_dssp HHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHH-T-TCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCcccCCCCCEEEEECCCCcCHHHHHHHHHHHh-C-CCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCC
Confidence 567788887654445555554555667899999999996 5 8887 9999863110 00 01 12344455555554
Q ss_pred EEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCc-ccccccce
Q 022336 251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 251 vI~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl-~DI~gAn~ 292 (299)
.+. ..||.+ .++.+++++|++|++++||||++ .||.+|+.
T Consensus 178 ~~~--~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~ 219 (264)
T 1yv9_A 178 PVY--IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQ 219 (264)
T ss_dssp CEE--CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHH
T ss_pred ccc--cCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHH
Confidence 332 468887 48999999999999999999995 99988764
No 192
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=66.97 E-value=23 Score=28.51 Aligned_cols=72 Identities=15% Similarity=0.106 Sum_probs=45.4
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh-----CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcE
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV-----FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~-----fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~v 251 (299)
++....=.+|+|+++.- -...+..|+.++.+. .+.+++||-|+..+.. .....+.+..+++.+|+++
T Consensus 89 ~~~~~~~ilv~d~~~~~-------s~~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~ 161 (187)
T 3c5c_A 89 LNWAHAFLVVYSVDSRQ-------SFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQYRQVTKAEGVALAGRFGCLF 161 (187)
T ss_dssp HTTCSEEEEEEETTCHH-------HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCEE
T ss_pred HhhCCEEEEEEECCCHH-------HHHHHHHHHHHHHHHhhccCCCCCEEEEEECcchhhcCccCHHHHHHHHHHcCCcE
Confidence 33344457888887421 123455666665542 2789999999984421 1123467788888899988
Q ss_pred EEccC
Q 022336 252 IRHRV 256 (299)
Q Consensus 252 I~ha~ 256 (299)
+.-+.
T Consensus 162 ~e~Sa 166 (187)
T 3c5c_A 162 FEVSA 166 (187)
T ss_dssp EECCS
T ss_pred EEEee
Confidence 77766
No 193
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=66.17 E-value=35 Score=34.16 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=52.3
Q ss_pred HhccCCCHHHHHHHHHHHhcCCCCcCCccccCCcCCCCHHHHHHcCCcEEEEec---------cCeeecCCCcccCchHH
Q 022336 137 ALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDK---------DNTLTAPYSLTLWGPLS 207 (299)
Q Consensus 137 ~~~q~~N~~gi~~~~~~~~~~p~ll~P~~~v~sI~~Id~~~Lk~~GIRaLVlD~---------DNTLT~p~~~~l~Pgv~ 207 (299)
+++..+|-+.+...+..+.. ..|++.|++.|++|- +|-++ ++...++.++.
T Consensus 21 ~~~~~~~~~~~~~~ad~~~~-------------------~g~~~~G~~~~~iDdgW~~~~~d~~g~~~-~~~~~fP~gl~ 80 (614)
T 3a21_A 21 SFAAKIDYSVIKKQVDAFVA-------------------AGLPAAGYTYINIDEGWWQGTRDSAGNIT-VDTAEWPGGMS 80 (614)
T ss_dssp HHTTCCCHHHHHHHHHHHHH-------------------TTHHHHTCCEEECCTTSCCSCBCTTCCBC-CCTTTSTTCHH
T ss_pred hhCccCCHHHHHHHHHHHHH-------------------cCHHhhCCEEEEECCCcCCCCcCCCCCEE-ECccccCCcHH
Confidence 57888898888888876542 346778999999872 56665 55555666899
Q ss_pred HHHHHHHHhCCCcEEEEeC
Q 022336 208 SSIEQCKSVFGHDIAVFSN 226 (299)
Q Consensus 208 e~L~~Lke~fGikVaIVSN 226 (299)
+..+.+++. |++++|-+.
T Consensus 81 ~l~~~i~~~-Glk~gi~~~ 98 (614)
T 3a21_A 81 AITAYIHSK-GLKAGIYTD 98 (614)
T ss_dssp HHHHHHHHT-TCEEEEEEE
T ss_pred HHHHHHHHC-CCeeEEEec
Confidence 999999997 999988774
No 194
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=65.64 E-value=6.3 Score=36.68 Aligned_cols=73 Identities=11% Similarity=0.215 Sum_probs=50.0
Q ss_pred HHHcCCcEEEEe--------ccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCC-------CCCccHHHHHH
Q 022336 178 LQRRGFKGVVFD--------KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY-------EYDNDASKARK 242 (299)
Q Consensus 178 Lk~~GIRaLVlD--------~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~-------~~d~~~e~a~~ 242 (299)
|++.|++.|++| -||.++ +....++.|+....+.+++. |.+++|-+...... ..+.-...++
T Consensus 50 l~~~Gy~yv~iDdgW~~~rd~~G~~~-~d~~rFP~G~k~ladyih~~-Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~- 126 (400)
T 4do4_A 50 WRDMGYTYLNIDDCWIGGRDASGRLM-PDPKRFPHGIPFLADYVHSL-GLKLGIYADMGNFTCMGYPGTTLDKVVQDAQ- 126 (400)
T ss_dssp HHHHTCCEEECCSSCEEEECTTCCEE-ECTTTSTTCHHHHHHHHHHT-TCEEEEEEEBSSBCTTSCBCBCGGGHHHHHH-
T ss_pred chhhCCeEEEECCCcccCCCCCCCEe-ECcccCCcccHHHHHHHHHC-CceEEEecCCCCcccCCCCchhHhHHHHHHH-
Confidence 677899999998 578888 55556667888888999997 99999998653211 1111122333
Q ss_pred HHHHcCCcEEE
Q 022336 243 LEGKIGIKVIR 253 (299)
Q Consensus 243 ~lk~LGI~vI~ 253 (299)
..+..|++++-
T Consensus 127 ~~a~wGvdylK 137 (400)
T 4do4_A 127 TFAEWKVDMLK 137 (400)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHhCCceEe
Confidence 34567998774
No 195
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=65.52 E-value=19 Score=33.48 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=63.1
Q ss_pred HhccCCCHHHHHHHHHHHhcCCCCcCCccccCCcCCCCHHHHHHcCCcEEEEec---------cCeeecCCCcccCchHH
Q 022336 137 ALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDK---------DNTLTAPYSLTLWGPLS 207 (299)
Q Consensus 137 ~~~q~~N~~gi~~~~~~~~~~p~ll~P~~~v~sI~~Id~~~Lk~~GIRaLVlD~---------DNTLT~p~~~~l~Pgv~ 207 (299)
+++..+|-+-+...+..+.. .-|++.|++.|++|- +|-++ ++...++.++.
T Consensus 18 ~~~~~~~e~~i~~~ad~~~~-------------------~gl~~~G~~~v~iDdgW~~~~rd~~G~~~-~~~~~FP~Gl~ 77 (362)
T 1uas_A 18 HFYCGINEQIIRETADALVN-------------------TGLAKLGYQYVNIDDCWAEYSRDSQGNFV-PNRQTFPSGIK 77 (362)
T ss_dssp HHTTCCCHHHHHHHHHHHHH-------------------TSHHHHTCCEEECCSSCBCSSCCTTSCCC-BCTTTCTTCHH
T ss_pred HHCCCCCHHHHHHHHHHHHH-------------------cCchhcCCcEEEECCCcCCCCCCCCCCee-EChhccCccHH
Confidence 46778888888888886542 235678888888872 34454 44444556788
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCC-C-----CCccHHHHHHHHHHcCCcEEE
Q 022336 208 SSIEQCKSVFGHDIAVFSNSAGLY-E-----YDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 208 e~L~~Lke~fGikVaIVSNnaGs~-~-----~d~~~e~a~~~lk~LGI~vI~ 253 (299)
+..+.+++. |.+++|-++-.... . .....+......+..||+++-
T Consensus 78 ~l~~~ih~~-Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK 128 (362)
T 1uas_A 78 ALADYVHAK-GLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLK 128 (362)
T ss_dssp HHHHHHHHT-TCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHC-CCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEE
Confidence 889999997 99999887653100 0 111234455566778998763
No 196
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=60.43 E-value=54 Score=25.54 Aligned_cols=77 Identities=22% Similarity=0.179 Sum_probs=48.7
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEE
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI 252 (299)
..++....=.+|+|.++.- -...+..++..+.+. .+.+++||-|+..+.......+.+..+.+.+|++++
T Consensus 71 ~~~~~~~~~i~v~d~~~~~-------s~~~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 143 (189)
T 4dsu_A 71 QYMRTGEGFLCVFAINNTK-------SFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFI 143 (189)
T ss_dssp HHHHHCSEEEEEEETTCHH-------HHHHHHHHHHHHHHHTTCSCCCEEEEEECTTSSSCSSCHHHHHHHHHHHTCCEE
T ss_pred HHHhcCCEEEEEEECCCHH-------HHHHHHHHHHHHHHhcCCCCCcEEEEEECccCcccccCHHHHHHHHHHcCCeEE
Confidence 3455555556777776521 123455666665542 267899999998554333446778888889999887
Q ss_pred EccCCCC
Q 022336 253 RHRVKKP 259 (299)
Q Consensus 253 ~ha~KKP 259 (299)
.-+.+..
T Consensus 144 ~~Sa~~g 150 (189)
T 4dsu_A 144 ETSAKTR 150 (189)
T ss_dssp ECCTTTC
T ss_pred EEeCCCC
Confidence 7655444
No 197
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=59.37 E-value=46 Score=25.29 Aligned_cols=81 Identities=5% Similarity=0.029 Sum_probs=48.8
Q ss_pred cCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEEc
Q 022336 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 202 l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiamVG 281 (299)
+.+++.+.++++-+. .+|.|+|.+.-....=+.-.+++.+++.+|+++.......-....+.+.+..|...=-.++||
T Consensus 3 ~s~~~~~~v~~~i~~--~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~ 80 (109)
T 3ipz_A 3 LTPQLKDTLEKLVNS--EKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIG 80 (109)
T ss_dssp CCHHHHHHHHHHHTS--SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEET
T ss_pred CCHHHHHHHHHHHcc--CCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEEC
Confidence 467888888888774 689999885100000123468999999999976543221111223344444465544588998
Q ss_pred CCc
Q 022336 282 MCR 284 (299)
Q Consensus 282 Drl 284 (299)
+..
T Consensus 81 g~~ 83 (109)
T 3ipz_A 81 GEF 83 (109)
T ss_dssp TEE
T ss_pred CEE
Confidence 864
No 198
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=58.87 E-value=38 Score=29.11 Aligned_cols=54 Identities=7% Similarity=-0.020 Sum_probs=33.2
Q ss_pred HHHHHHcCCcEEEEeccCeee--cCCCcc--cCchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLT--APYSLT--LWGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT--~p~~~~--l~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
.+.|++.|+.+|++|.+-.-. .-..+. -..+...+.+.|.+. |. +|++++...+
T Consensus 84 ~~~l~~~~iPvV~i~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~~ 142 (295)
T 3hcw_A 84 KQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQ-GVDELIFITEKGN 142 (295)
T ss_dssp HHHHHHTTCCEEEESCCCSSGGGGSCEEEECHHHHHHHHHHHHHHH-CCSEEEEEEESSC
T ss_pred HHHHHhCCCCEEEECCCCccccCCceEEecCcHHHHHHHHHHHHHc-CCccEEEEcCCcc
Confidence 577889999999998653211 001111 123556667777776 76 6888887653
No 199
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=58.14 E-value=8.1 Score=33.51 Aligned_cols=33 Identities=6% Similarity=-0.150 Sum_probs=23.4
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCCCcEEEEcC----Ccccc
Q 022336 251 VIRHRVKKPAGTAEEIEKHFGCQSSQLIMVDM----CRIVI 287 (299)
Q Consensus 251 vI~ha~KKP~p~le~alk~lGi~PeEiamVGD----rl~DI 287 (299)
+...+.-|- .+++.+ +|+++++++.||| ..+|+
T Consensus 191 I~~~~vsKg-~al~~l---~gi~~~~viafGDs~~~~~NDi 227 (262)
T 2fue_A 191 VFPEGWDKR-YCLDSL---DQDSFDTIHFFGNETSPGGNDF 227 (262)
T ss_dssp EEETTCSTT-HHHHHH---TTSCCSEEEEEESCCSTTSTTH
T ss_pred EecCCCCHH-HHHHHH---HCCCHHHEEEECCCCCCCCCCH
Confidence 333344443 235555 8999999999999 99993
No 200
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=57.49 E-value=51 Score=25.75 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=46.5
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
.++....=.+|+|.++- .-...+..|+..+.+..+.+++||=|+..........+.+..+++..+++++.-+.
T Consensus 113 ~~~~~d~~i~v~D~~~~-------~s~~~~~~~~~~i~~~~~~piilv~NK~D~~~~~~~~~~~~~~~~~~~~~~~~~Sa 185 (208)
T 3clv_A 113 YYRGATCAIVVFDISNS-------NTLDRAKTWVNQLKISSNYIIILVANKIDKNKFQVDILEVQKYAQDNNLLFIQTSA 185 (208)
T ss_dssp HHTTCSEEEEEEETTCH-------HHHHHHHHHHHHHHHHSCCEEEEEEECTTCC-CCSCHHHHHHHHHHTTCEEEEECT
T ss_pred HhcCCCEEEEEEECCCH-------HHHHHHHHHHHHHHhhCCCcEEEEEECCCcccccCCHHHHHHHHHHcCCcEEEEec
Confidence 34344444555565432 11245567788877655789999999985222223456778888888988776555
Q ss_pred CCC
Q 022336 257 KKP 259 (299)
Q Consensus 257 KKP 259 (299)
+..
T Consensus 186 ~~~ 188 (208)
T 3clv_A 186 KTG 188 (208)
T ss_dssp TTC
T ss_pred CCC
Confidence 444
No 201
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=56.07 E-value=55 Score=24.92 Aligned_cols=56 Identities=13% Similarity=0.165 Sum_probs=37.3
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+.+.. +.+++||-|+..+.......+.++.+.+.+|++++.-+.+..
T Consensus 92 ~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 149 (170)
T 1g16_A 92 TNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKND 149 (170)
T ss_dssp HTHHHHHHHHHHHSCTTCEEEEEEECTTCTTCCSCHHHHHHHHHHHTCCEEECBTTTT
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEECccCCcCccCHHHHHHHHHHcCCeEEEEECCCC
Confidence 34556777666532 678999999985532223456777888888988877665444
No 202
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=54.96 E-value=66 Score=24.60 Aligned_cols=75 Identities=15% Similarity=0.176 Sum_probs=48.1
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC---CCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEE
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF---GHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f---GikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ 253 (299)
++....=.+|+|.++.- -...+.+|+.++.+.. +.+++||-|+..+.. .....+.+..+.+.+|++++.
T Consensus 73 ~~~~d~~i~v~d~~~~~-------s~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (169)
T 3q85_A 73 LQTGDAFLIVFSVTDRR-------SFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIE 145 (169)
T ss_dssp HHHCSEEEEEEETTCHH-------HHHTHHHHHHHHHHHSTTSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEEE
T ss_pred hccCCEEEEEEECCChH-------HHHHHHHHHHHHHhcccCCCCCEEEEeeCcchhhcccCCHHHHHHHHHHcCCcEEE
Confidence 44455667788876521 2245567777766532 578999999985431 223456778888889998776
Q ss_pred ccCCCC
Q 022336 254 HRVKKP 259 (299)
Q Consensus 254 ha~KKP 259 (299)
-+.+..
T Consensus 146 ~Sa~~~ 151 (169)
T 3q85_A 146 TSAALH 151 (169)
T ss_dssp CBTTTT
T ss_pred ecCccC
Confidence 655443
No 203
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=53.81 E-value=67 Score=24.05 Aligned_cols=75 Identities=21% Similarity=0.197 Sum_probs=44.7
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h 254 (299)
++....=.+++|.++. .-...+.+++..+.+. .+.+++||=|+..........+.++.+.+.+|++++.-
T Consensus 72 ~~~~~~~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~p~iiv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 144 (166)
T 2ce2_X 72 MRTGEGFLCVFAINNT-------KSFEDIHQYREQIKRVKDSDDVPMVLVGNKSDLAARTVESRQAQDLARSYGIPYIET 144 (166)
T ss_dssp HHHCSEEEEEEETTCH-------HHHHHHHHHHHHHHHHHTCSCCCEEEEEECTTCSCCCSCHHHHHHHHHHHTCCEEEE
T ss_pred hccCCEEEEEEECCCH-------HHHHHHHHHHHHHHHhcCCCCCcEEEEEEchhhhhcccCHHHHHHHHHHcCCeEEEe
Confidence 3344444566665432 1123445566655442 16789999999854332234567788888899887765
Q ss_pred cCCCC
Q 022336 255 RVKKP 259 (299)
Q Consensus 255 a~KKP 259 (299)
+.+..
T Consensus 145 Sa~~~ 149 (166)
T 2ce2_X 145 SAKTR 149 (166)
T ss_dssp CTTTC
T ss_pred cCCCC
Confidence 54443
No 204
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=53.27 E-value=9.5 Score=32.13 Aligned_cols=98 Identities=17% Similarity=0.094 Sum_probs=56.9
Q ss_pred CcCCccccCCc-----CCCCHHHHHHcCCcEEEEeccCeeecCCCcc-cCchHHHHHHHHHHhCCCc-EEEEeCCCCCCC
Q 022336 160 LALPHVTVPDI-----RYIDWAELQRRGFKGVVFDKDNTLTAPYSLT-LWGPLSSSIEQCKSVFGHD-IAVFSNSAGLYE 232 (299)
Q Consensus 160 ll~P~~~v~sI-----~~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~-l~Pgv~e~L~~Lke~fGik-VaIVSNnaGs~~ 232 (299)
--.|++.++++ ..++++.+. +|-++|++..=++-+ |.-.. -.|.+.+..+++++. |+. |+.||-..
T Consensus 30 ~~aPdf~l~~~~~~G~~~v~L~d~~-~Gk~vvL~f~~a~wc-p~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~---- 102 (184)
T 3uma_A 30 DKLPNATFKEKTADGPVEVTTELLF-KGKRVVLFAVPGAFT-PTCSLNHLPGYLENRDAILAR-GVDDIAVVAVND---- 102 (184)
T ss_dssp CBCCCCEEEEEETTEEEEEEHHHHH-TTSEEEEEEESCTTC-HHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC----
T ss_pred CCCCCcEeecccCCCceEEeHHHHh-CCCCEEEEEEcCCCC-CCcCHHHHHHHHHHHHHHHHc-CCCEEEEEECCC----
Confidence 34677777776 345665521 354577766645444 22222 134555556667765 888 88888654
Q ss_pred CCccHHHHHHHHHHcCCc--EEEccCCCCHHHHHHHHHHhCCC
Q 022336 233 YDNDASKARKLEGKIGIK--VIRHRVKKPAGTAEEIEKHFGCQ 273 (299)
Q Consensus 233 ~d~~~e~a~~~lk~LGI~--vI~ha~KKP~p~le~alk~lGi~ 273 (299)
...++.+.++.|++ +-.-.. |. .++.+.+|+.
T Consensus 103 ----~~~~~~f~~~~~~~~~fp~l~D--~~---~~va~~yGv~ 136 (184)
T 3uma_A 103 ----LHVMGAWATHSGGMGKIHFLSD--WN---AAFTKAIGME 136 (184)
T ss_dssp ----HHHHHHHHHHHTCTTTSEEEEC--TT---CHHHHHTTCE
T ss_pred ----HHHHHHHHHHhCCCCceEEEEc--Cc---hHHHHHcCCc
Confidence 56778888888765 322221 21 2466778874
No 205
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=53.02 E-value=34 Score=31.66 Aligned_cols=90 Identities=13% Similarity=0.161 Sum_probs=49.4
Q ss_pred cCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc-cCC-CCHHHHHHHHHHh-CC
Q 022336 196 APYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH-RVK-KPAGTAEEIEKHF-GC 272 (299)
Q Consensus 196 ~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h-a~K-KP~p~le~alk~l-Gi 272 (299)
+|......+.+.+.+++|+.. +...+-||-.+|-..-+...+.+..+.+++|++.+.| .+. .....++..+..+ ..
T Consensus 31 PPk~~~~~~~l~~~~~~l~~l-~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~ 109 (304)
T 3fst_A 31 PPRTSEMEQTLWNSIDRLSSL-KPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNN 109 (304)
T ss_dssp CCCSHHHHHHHHHHHHHHHTT-CCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHHHHhcC-CCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHC
Confidence 444444344455667778764 7777888877764321112234566667789988776 222 2222344333322 23
Q ss_pred CCCcEEEE-cCCccc
Q 022336 273 QSSQLIMV-DMCRIV 286 (299)
Q Consensus 273 ~PeEiamV-GDrl~D 286 (299)
-..+++.+ ||-..+
T Consensus 110 GI~nILaLrGDpp~~ 124 (304)
T 3fst_A 110 GIRHIVALRGDLPPG 124 (304)
T ss_dssp TCCEEEEECCCCC--
T ss_pred CCCEEEEecCCCCCC
Confidence 45788777 886543
No 206
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=52.99 E-value=69 Score=28.38 Aligned_cols=82 Identities=18% Similarity=0.214 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHH-cCCcEEE-ccCCCCHHHHHHHHHHhCCCC-CcEEEE---
Q 022336 207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-IGIKVIR-HRVKKPAGTAEEIEKHFGCQS-SQLIMV--- 280 (299)
Q Consensus 207 ~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~-LGI~vI~-ha~KKP~p~le~alk~lGi~P-eEiamV--- 280 (299)
.+.|.++.+. |-+++|+|+... ..+.+...++. +|+.+.. ++ ..|...-.++++.|.-.+ -.+++|
T Consensus 102 ~~ll~~~~~~-~~kvlIFs~~~~------~~~~l~~~L~~~~g~~~~~l~G-~~~~~~R~~~i~~F~~~~~~~v~L~st~ 173 (271)
T 1z5z_A 102 MEIIEEALDE-GDKIAIFTQFVD------MGKIIRNIIEKELNTEVPFLYG-ELSKKERDDIISKFQNNPSVKFIVLSVK 173 (271)
T ss_dssp HHHHHHHHHT-TCCEEEEESCHH------HHHHHHHHHHHHHCSCCCEECT-TSCHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred HHHHHHHHhC-CCeEEEEeccHH------HHHHHHHHHHHhcCCcEEEEEC-CCCHHHHHHHHHHhcCCCCCCEEEEehh
Confidence 4455555554 889999999751 12233333333 5876543 44 344444556777776553 344554
Q ss_pred -cCCcccccccceeeee
Q 022336 281 -DMCRIVIFPGPVVIFL 296 (299)
Q Consensus 281 -GDrl~DI~gAn~~~~~ 296 (299)
|..=.|+.+|+.||++
T Consensus 174 ~~g~Glnl~~a~~VI~~ 190 (271)
T 1z5z_A 174 AGGFGINLTSANRVIHF 190 (271)
T ss_dssp TTCCCCCCTTCSEEEEC
T ss_pred hhcCCcCcccCCEEEEE
Confidence 3344568899999875
No 207
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=50.50 E-value=40 Score=26.87 Aligned_cols=55 Identities=11% Similarity=-0.007 Sum_probs=34.1
Q ss_pred chHHHHHHHHHHh-----CCCcEEEEeCCCCCCC--CCccHHHHHHHHHHcCCcEEEccCCC
Q 022336 204 GPLSSSIEQCKSV-----FGHDIAVFSNSAGLYE--YDNDASKARKLEGKIGIKVIRHRVKK 258 (299)
Q Consensus 204 Pgv~e~L~~Lke~-----fGikVaIVSNnaGs~~--~d~~~e~a~~~lk~LGI~vI~ha~KK 258 (299)
..+..|+..+.+. .+.+++||-|+..+.. .....+.+..+.+.+|++++.-+.+.
T Consensus 113 ~~~~~~~~~i~~~~~~~~~~~piilv~nK~Dl~~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~ 174 (208)
T 2yc2_C 113 ESCKAWFELLKSARPDRERPLRAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSANP 174 (208)
T ss_dssp HHHHHHHHHHHHHCSCTTSCCEEEEEEECC-------CCCHHHHHHHHHHTTCEEEECCC--
T ss_pred HHHHHHHHHHHHhhcccccCCcEEEEEECcccchhhccCCHHHHHHHHHHcCCEEEEeccCC
Confidence 4556777777653 2678999999985432 11224677888888998877766555
No 208
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=49.90 E-value=17 Score=32.13 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=55.6
Q ss_pred cCCcCCCCHHHHH------HcCCcEEEEec-cCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHH
Q 022336 167 VPDIRYIDWAELQ------RRGFKGVVFDK-DNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK 239 (299)
Q Consensus 167 v~sI~~Id~~~Lk------~~GIRaLVlD~-DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~ 239 (299)
.|||...|+..|. +.|...+-+|+ ||+.+ |. ..+.+.+.+.+++.-.. -+.+-+.++++ ...
T Consensus 4 ~pSila~D~~~l~~~i~~~~~gad~lHvDvmDG~fv-pn-~t~G~~~v~~lr~~~~~-~~dvhLmv~dp--------~~~ 72 (231)
T 3ctl_A 4 SPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFV-PN-LTLSPFFVSQVKKLATK-PLDCHLMVTRP--------QDY 72 (231)
T ss_dssp EEBGGGSCGGGHHHHHHHHHTTCSCEEEEEECSSSS-SC-CCBCHHHHHHHHTTCCS-CEEEEEESSCG--------GGT
T ss_pred EeehhhCChhhHHHHHHHHHcCCCEEEEEEEeCccC-cc-chhcHHHHHHHHhccCC-cEEEEEEecCH--------HHH
Confidence 3566666664332 67999999996 99998 53 56666666666554221 34677777776 234
Q ss_pred HHHHHHHcCCcEE-EccCC-CCHH-HHHHHHHHhCCC
Q 022336 240 ARKLEGKIGIKVI-RHRVK-KPAG-TAEEIEKHFGCQ 273 (299)
Q Consensus 240 a~~~lk~LGI~vI-~ha~K-KP~p-~le~alk~lGi~ 273 (299)
++.+ .+.|...+ .|..- -+.. ...+.++..|++
T Consensus 73 i~~~-~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k 108 (231)
T 3ctl_A 73 IAQL-ARAGADFITLHPETINGQAFRLIDEIRRHDMK 108 (231)
T ss_dssp HHHH-HHHTCSEEEECGGGCTTTHHHHHHHHHHTTCE
T ss_pred HHHH-HHcCCCEEEECcccCCccHHHHHHHHHHcCCe
Confidence 4333 34576544 34322 2332 345556667764
No 209
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=49.49 E-value=86 Score=24.00 Aligned_cols=78 Identities=6% Similarity=-0.027 Sum_probs=46.7
Q ss_pred chHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHH-HHHHHHhCCCCCcEEEEcC
Q 022336 204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-EEIEKHFGCQSSQLIMVDM 282 (299)
Q Consensus 204 Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~l-e~alk~lGi~PeEiamVGD 282 (299)
+++.+.++++.+. .+|+|.|-.......=+.-.+|+.+++..|+++......+ ++.+ +.+.+..|...==.++||+
T Consensus 3 ~~~~~~v~~~i~~--~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~-d~~~~~~l~~~~g~~tvP~ifi~g 79 (111)
T 3zyw_A 3 EDLNLRLKKLTHA--APCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS-DEEVRQGLKAYSSWPTYPQLYVSG 79 (111)
T ss_dssp -CHHHHHHHHHTS--SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEETT
T ss_pred HHHHHHHHHHHhc--CCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC-CHHHHHHHHHHHCCCCCCEEEECC
Confidence 4567788887663 6899998622100111234789999999999765432222 1333 3344445766666789988
Q ss_pred Cc
Q 022336 283 CR 284 (299)
Q Consensus 283 rl 284 (299)
..
T Consensus 80 ~~ 81 (111)
T 3zyw_A 80 EL 81 (111)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 210
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=49.48 E-value=1.7e+02 Score=27.54 Aligned_cols=18 Identities=28% Similarity=0.462 Sum_probs=14.9
Q ss_pred HHHcCCcEEEEeccCeee
Q 022336 178 LQRRGFKGVVFDKDNTLT 195 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT 195 (299)
-++.|+++|++++|-...
T Consensus 144 a~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 144 AEALGFKALVITIDTPVL 161 (352)
T ss_dssp HHHTTCCCEEEECSCSSC
T ss_pred HHHcCCCEEEEEeCCCCC
Confidence 356899999999998764
No 211
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=49.41 E-value=1.1e+02 Score=28.36 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=62.5
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||.+++=. .-.+.+.+..+-|.. +|..++++--.. ...++.+++..++|++--..
T Consensus 57 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvLs~-~~~D~iviR~~~--------~~~~~~la~~~~vPVINagd 122 (304)
T 3r7f_A 57 AEKKLGMNVLNLDGTSTSV-----QKGETLYDTIRTLES-IGVDVCVIRHSE--------DEYYEELVSQVNIPILNAGD 122 (304)
T ss_dssp HHHHTTCEEEEEETTSTTS-----CSSSCHHHHHHHHHH-HTCCEEEEECSS--------TTCHHHHHHHCSSCEEESCC
T ss_pred HHHHCCCeEEEECcccccC-----CCCCCHHHHHHHHHH-hcCCEEEEecCC--------hhHHHHHHHhCCCCEEeCCC
Confidence 3456788999887654322 223567777777766 477766665543 34577778888999886532
Q ss_pred -CCCHH--H---HHHHHHHhC-CCCCcEEEEcCCcc
Q 022336 257 -KKPAG--T---AEEIEKHFG-CQSSQLIMVDMCRI 285 (299)
Q Consensus 257 -KKP~p--~---le~alk~lG-i~PeEiamVGDrl~ 285 (299)
..-+| . +..+.+++| ++--.+++|||-.+
T Consensus 123 g~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~~~ 158 (304)
T 3r7f_A 123 GCGQHPTQSLLDLMTIYEEFNTFKGLTVSIHGDIKH 158 (304)
T ss_dssp TTSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCCTT
T ss_pred CCCcCcHHHHHHHHHHHHHhCCCCCCEEEEEcCCCC
Confidence 33344 2 556777887 56678999999643
No 212
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=49.09 E-value=16 Score=34.83 Aligned_cols=95 Identities=18% Similarity=0.292 Sum_probs=63.0
Q ss_pred HhccCCCHHHHHHHHHHHhcCCCCcCCccccCCcCCCCHHHHHHcCCcEEEEe---------ccCeeecCCCcccCchHH
Q 022336 137 ALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFD---------KDNTLTAPYSLTLWGPLS 207 (299)
Q Consensus 137 ~~~q~~N~~gi~~~~~~~~~~p~ll~P~~~v~sI~~Id~~~Lk~~GIRaLVlD---------~DNTLT~p~~~~l~Pgv~ 207 (299)
+++..+|-+-+...+..+.. ..|++.|++.|++| -+|-++ ++...++.++.
T Consensus 18 ~~~~~~~e~~i~~~ad~~~~-------------------~gl~~~G~~~~~iDdgW~~~~r~~~G~~~-~~~~kFP~Gl~ 77 (397)
T 3a5v_A 18 KYGCNVDEQLILDAAKAIAS-------------------SGLKDLGYNYVIIDDCWQKNERESSKTLL-ADPTKFPRGIK 77 (397)
T ss_dssp HHGGGCCHHHHHHHHHHHHH-------------------HTHHHHTCCEEECCSSCBCSSCCTTSCCC-BCTTTCTTCHH
T ss_pred HhCcCCCHHHHHHHHHHHHH-------------------cCCcccCceEEEECCCcCCCCCCCCCCeE-EChhcCCcCHH
Confidence 45678888888888776442 24667899999997 456665 44445556788
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCC------CCCccHHHHHHHHHHcCCcEEE
Q 022336 208 SSIEQCKSVFGHDIAVFSNSAGLY------EYDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 208 e~L~~Lke~fGikVaIVSNnaGs~------~~d~~~e~a~~~lk~LGI~vI~ 253 (299)
...+.+++. |.+++|-+.-.... ..+.....+ ...+..||+++-
T Consensus 78 ~l~~~i~~~-Glk~Giw~~pg~~tc~~~pg~~~~~~~~~-~~~~~wGvdyvK 127 (397)
T 3a5v_A 78 PLVDDIHNL-GLKAGIYSSAGTLTCGGHIASLGYEDIDA-KTWAKWGIDYLK 127 (397)
T ss_dssp HHHHHHHHT-TCEEEEEEESSSBCTTSCBCCTTCHHHHH-HHHHHHTCCEEE
T ss_pred HHHHHHHHc-CCEEEEEecCCCCccCCCHHHHHHHHHHH-HHHHHcCCCEEE
Confidence 989999997 99999887643110 112222334 345678998774
No 213
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=47.85 E-value=81 Score=25.27 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=45.6
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC--CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEE
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF--GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI 252 (299)
...++....=.+|+|.++-- -...+..|+..+.+.. +.+++||-|+..+.......+.+..+.+.+|++++
T Consensus 87 ~~~~~~~d~ii~v~d~~~~~-------s~~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~ 159 (213)
T 3cph_A 87 TAYYRGAMGIILVYDVTDER-------TFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIPFI 159 (213)
T ss_dssp HHHHTTCSEEEEEEETTCHH-------HHHTHHHHHHHHHHHTTTCSEEEEEEECTTCSSCCSCHHHHHHHHHHHTCCEE
T ss_pred HHHhccCCEEEEEEECCCHH-------HHHHHHHHHHHHHHhcCCCCCEEEEEECCCCcccccCHHHHHHHHHHcCCEEE
Confidence 34444444445556654311 1234556776665532 57899999998553222334667778888898877
Q ss_pred EccCCCC
Q 022336 253 RHRVKKP 259 (299)
Q Consensus 253 ~ha~KKP 259 (299)
.-+.+..
T Consensus 160 ~~Sa~~~ 166 (213)
T 3cph_A 160 ESSAKND 166 (213)
T ss_dssp ECBTTTT
T ss_pred EEeCCCC
Confidence 6654443
No 214
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=47.34 E-value=82 Score=23.16 Aligned_cols=44 Identities=11% Similarity=-0.077 Sum_probs=29.9
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.+++..+.+|++|.+- ++ ....+.++++++.. +.+++++|+..
T Consensus 45 ~~l~~~~~dlvi~d~~l----~~-----~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (137)
T 3hdg_A 45 RLFGLHAPDVIITDIRM----PK-----LGGLEMLDRIKAGGAKPYVIVISAFS 89 (137)
T ss_dssp HHHHHHCCSEEEECSSC----SS-----SCHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred HHHhccCCCEEEEeCCC----CC-----CCHHHHHHHHHhcCCCCcEEEEecCc
Confidence 45667789999999862 11 23456777777642 35788888876
No 215
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=46.87 E-value=46 Score=28.40 Aligned_cols=52 Identities=10% Similarity=-0.082 Sum_probs=27.3
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc--CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL--WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l--~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
.+.|++.|+..|++|.+-.-. -..+.. ..+...+.+.|.+. |. +|++++...
T Consensus 81 ~~~l~~~~iPvV~~~~~~~~~-~~~V~~D~~~~g~~a~~~L~~~-G~~~i~~i~~~~ 135 (290)
T 3clk_A 81 LQLLQSSDVPYCFLSMGFDDD-RPFISSDDEDIGYQATNLLINE-GHRQIGIAGIDQ 135 (290)
T ss_dssp HHHHHCC--CEEEESCC--CC-SCEEECCHHHHHHHHHHHHHTT-TCCSEEEESCCC
T ss_pred HHHHHhCCCCEEEEcCCCCCC-CCEEEeChHHHHHHHHHHHHHc-CCCEEEEEeCCC
Confidence 456777889988887642100 001111 12344555666665 65 688888664
No 216
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=46.53 E-value=8.6 Score=32.80 Aligned_cols=23 Identities=0% Similarity=-0.247 Sum_probs=17.4
Q ss_pred HHHHHHHHhCCCCCcEEEEcC----Ccccc
Q 022336 262 TAEEIEKHFGCQSSQLIMVDM----CRIVI 287 (299)
Q Consensus 262 ~le~alk~lGi~PeEiamVGD----rl~DI 287 (299)
+++.+ +|+++++++.||| +.+|+
T Consensus 192 al~~l---~~i~~~~viafGD~~~~~~ND~ 218 (246)
T 2amy_A 192 CLRHV---ENDGYKTIYFFGDKTMPGGNDH 218 (246)
T ss_dssp GGGGT---TTSCCSEEEEEECSCC---CCC
T ss_pred HHHHH---hCCCHHHEEEECCCCCCCCCcH
Confidence 35444 8999999999999 99993
No 217
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=45.89 E-value=98 Score=23.61 Aligned_cols=44 Identities=9% Similarity=-0.179 Sum_probs=29.2
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++.+++. .+.+++++|...
T Consensus 45 ~~l~~~~~dlii~D~~l----~~-----~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 45 RFLSLTRPDLIISDVLM----PE-----MDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHTTCCCSEEEEESCC----SS-----SCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHhCCCCEEEEeCCC----CC-----CCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 34556778999999862 11 2345667777663 246899999876
No 218
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=45.61 E-value=6.3 Score=37.58 Aligned_cols=13 Identities=31% Similarity=0.626 Sum_probs=11.7
Q ss_pred CcEEEEeccCeee
Q 022336 183 FKGVVFDKDNTLT 195 (299)
Q Consensus 183 IRaLVlD~DNTLT 195 (299)
+|.|+||+|||++
T Consensus 1 ~~~~~fdvdgv~~ 13 (384)
T 1qyi_A 1 MKKILFDVDGVFL 13 (384)
T ss_dssp CCEEEECSBTTTB
T ss_pred CceEEEecCceee
Confidence 5889999999987
No 219
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=45.38 E-value=45 Score=25.77 Aligned_cols=56 Identities=13% Similarity=0.066 Sum_probs=37.7
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
+.+.||+|+-++-. =+..--.-+.+..+++++. |.++.++.=++ .+..+++..|+.
T Consensus 47 ~~~~vvlDls~v~~--iDssgl~~L~~~~~~~~~~-g~~l~l~~~~~----------~v~~~l~~~gl~ 102 (130)
T 2kln_A 47 QVEWFVLNAESNVE--VDLTALDALDQLRTELLRR-GIVFAMARVKQ----------DLRESLRAASLL 102 (130)
T ss_dssp CCEEEEEECSCCSS--SBCSTTTHHHHHHHHHHTT-TEEEEEECCSS----------HHHHHHHHCTTH
T ss_pred CceEEEEECCCCCh--hhHHHHHHHHHHHHHHHHC-CCEEEEEcCCH----------HHHHHHHHcCCh
Confidence 68999999988754 1222334556667778776 88888776554 566777777763
No 220
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=44.84 E-value=36 Score=26.73 Aligned_cols=58 Identities=12% Similarity=0.003 Sum_probs=38.0
Q ss_pred HcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
+.+.+.|++|+-|+=. -+ ...-..+....+.++.. |.+++++.=++ .+...+..+|+.
T Consensus 40 ~~~~~~vIlDlsgV~~-iD-s~g~~~L~~~~~~~~l~-G~~~~l~Gi~p----------~va~~l~~~G~~ 97 (123)
T 3zxn_A 40 GVAGKGLVIDISALEV-VD-EFVTRVLIEISRLAELL-GLPFVLTGIKP----------AVAITLTEMGLD 97 (123)
T ss_dssp SSCCSEEEEECTTCSS-CC-HHHHHHHHHHHHHHHHH-TCCEEEECCCH----------HHHHHHHHTTCC
T ss_pred hcCCCEEEEEcCCCCc-cc-HHHHHHHHHHHHHHHHC-CCEEEEEcCCH----------HHHHHHHHhCCC
Confidence 3689999999999855 11 12223334555667766 88988776553 566666777774
No 221
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=44.78 E-value=1.1e+02 Score=24.73 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=51.2
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEE
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ 253 (299)
++....=.+|+|+++--+ ...+.+|+.++++. .+.+++||-|+..+... ....+.+..+++.++++++.
T Consensus 94 ~~~~d~~ilv~d~~~~~s-------~~~~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~a~~~~~~~~e 166 (195)
T 3cbq_A 94 LQTGDAFLIVFSVTDRRS-------FSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIE 166 (195)
T ss_dssp HHHCSEEEEEEETTCHHH-------HHTHHHHHHHHHHHSTTSCCCEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEEE
T ss_pred hccCCEEEEEEECCCHHH-------HHHHHHHHHHHHHhcCCCCCCEEEEeechhccccCCcCHHHHHHHHHHhCCEEEE
Confidence 344555577888765322 23466777777653 26789999999855321 12345677788888887765
Q ss_pred ccCCCCHH---HHHHHHHHh
Q 022336 254 HRVKKPAG---TAEEIEKHF 270 (299)
Q Consensus 254 ha~KKP~p---~le~alk~l 270 (299)
-+.+.... .++.+++.+
T Consensus 167 ~Sa~~~~~v~~lf~~l~~~i 186 (195)
T 3cbq_A 167 TSAALHHNTRELFEGAVRQI 186 (195)
T ss_dssp EBTTTTBSHHHHHHHHHHHH
T ss_pred EcCCCCCCHHHHHHHHHHHH
Confidence 55433322 144555443
No 222
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=44.51 E-value=95 Score=23.09 Aligned_cols=44 Identities=7% Similarity=0.132 Sum_probs=29.2
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH--h-CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS--V-FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke--~-fGikVaIVSNna 228 (299)
+.++...+.+|++|.+-- .....+.++++++ . .+.+++++|...
T Consensus 45 ~~l~~~~~dlii~D~~l~---------~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 45 YQVQQAKYDLIILDIGLP---------IANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp HHHTTCCCSEEEECTTCG---------GGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred HHhhcCCCCEEEEeCCCC---------CCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 345566788899987621 1234667777776 1 256899999876
No 223
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=43.98 E-value=65 Score=27.19 Aligned_cols=53 Identities=19% Similarity=0.182 Sum_probs=33.7
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
.+.+++.||.+|++|.+-.-. ..-..+ ......+.+.|.+. |. +|+++++..+
T Consensus 85 ~~~l~~~~iPvV~~~~~~~~~-~~~~~V~~D~~~~g~~a~~~L~~~-G~~~i~~i~~~~~ 142 (292)
T 3k4h_A 85 IQYLHEQNFPFVLIGKPYDRK-DEITYVDNDNYTAAREVAEYLISL-GHKQIAFIGGGSD 142 (292)
T ss_dssp HHHHHHTTCCEEEESCCSSCT-TTSCEEECCHHHHHHHHHHHHHHT-TCCCEEEEESCTT
T ss_pred HHHHHHCCCCEEEECCCCCCC-CCCCEEEECcHHHHHHHHHHHHHC-CCceEEEEeCccc
Confidence 466788999999998763211 101111 23445666777776 76 6999998764
No 224
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=43.96 E-value=88 Score=24.73 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=37.2
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
+.+.+|+..+++.. +.+++||-|+..+... ....+.++.+.+.+|++++.-+.+..
T Consensus 111 ~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~g 169 (189)
T 2gf9_A 111 AAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKEN 169 (189)
T ss_dssp HTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEECBTTTT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEECcccccccCCCHHHHHHHHHHcCCeEEEEECCCC
Confidence 44566777776632 6789999999854321 12345778888889988777665444
No 225
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=43.24 E-value=1e+02 Score=24.17 Aligned_cols=71 Identities=23% Similarity=0.201 Sum_probs=42.6
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKK 258 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KK 258 (299)
..=.+|+|.+..-. ...+..|+..+.+. .+.+++||=|+..+.......+.++.+.+.+|++++.-+.+.
T Consensus 94 d~~i~v~d~~~~~s-------~~~~~~~~~~i~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~Sa~~ 166 (190)
T 3con_A 94 EGFLCVFAINNSKS-------FADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKT 166 (190)
T ss_dssp SEEEEEEETTCHHH-------HHHHHHHHHHHHHHHTCSCCCEEEEEECTTCSCCCSCHHHHHHHHHHHTCCEEECCTTT
T ss_pred CEEEEEEECcCHHH-------HHHHHHHHHHHHHHhCCCCCeEEEEEECCcCCcccCCHHHHHHHHHHcCCeEEEEeCCC
Confidence 33346666654321 23445555555432 267899999998543222345678888888999887765544
Q ss_pred C
Q 022336 259 P 259 (299)
Q Consensus 259 P 259 (299)
.
T Consensus 167 ~ 167 (190)
T 3con_A 167 R 167 (190)
T ss_dssp C
T ss_pred C
Confidence 3
No 226
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=43.18 E-value=90 Score=24.79 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=43.9
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCC
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKK 258 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KK 258 (299)
..=.+|+|.++- .-...+.+|++.+++.. +.+++||-|+..+... ....+.++.+.+.+|++++.-+.+.
T Consensus 97 d~~i~v~d~~~~-------~s~~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~ 169 (191)
T 3dz8_A 97 MGFILMYDITNE-------ESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKE 169 (191)
T ss_dssp CEEEEEEETTCH-------HHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEECBTTT
T ss_pred CEEEEEEECcCH-------HHHHHHHHHHHHHHHhcCCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEEEEECCC
Confidence 334566665531 12245566777776631 6789999999854321 2234677888888999877665544
Q ss_pred C
Q 022336 259 P 259 (299)
Q Consensus 259 P 259 (299)
.
T Consensus 170 ~ 170 (191)
T 3dz8_A 170 N 170 (191)
T ss_dssp T
T ss_pred C
Confidence 3
No 227
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=43.17 E-value=95 Score=22.72 Aligned_cols=45 Identities=7% Similarity=-0.255 Sum_probs=28.8
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.+++..+.+|++|.+- ++ .....+.++++++..+.+++++|+..
T Consensus 48 ~~~~~~~~dlii~d~~~----~~----~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 48 RCAPDLRPDIALVDIML----CG----ALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHCCSEEEEESSC----CS----SSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHhCCCCEEEEecCC----CC----CCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 34556678999999763 10 01234556665553368999999876
No 228
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=43.15 E-value=1.1e+02 Score=23.66 Aligned_cols=57 Identities=21% Similarity=0.195 Sum_probs=37.1
Q ss_pred chHHHHHHHHHHh---CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCCH
Q 022336 204 GPLSSSIEQCKSV---FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKPA 260 (299)
Q Consensus 204 Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP~ 260 (299)
..+..++..+... .+.+++||-|+..+.. .....+.++.+.+.+|++++.-+.+...
T Consensus 110 ~~~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~ 170 (195)
T 3bc1_A 110 LNVRNWISQLQMHAYSENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGT 170 (195)
T ss_dssp HTHHHHHHHHHHHSSSSSCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCCEEECCTTTCT
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEECcccccccccCHHHHHHHHHHcCCCEEEEECCCCC
Confidence 3456677776653 2678999999985432 1123466777888889888776655443
No 229
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=43.10 E-value=1.5e+02 Score=27.86 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=62.3
Q ss_pred CCHH-HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE
Q 022336 173 IDWA-ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 173 Id~~-~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v 251 (299)
++|+ ..++.|-.++.||-+++=. .-.+.+.+..+-|..- ..++++--.. ...++.+++..++|+
T Consensus 79 ~SFE~A~~~LGg~~i~l~~~~ssl-----~kgEsl~DTarvLs~~--~D~IviR~~~--------~~~~~~lA~~~~vPV 143 (339)
T 4a8t_A 79 VSFETAMEQLGGHGEYLAPGQIQL-----GGHETIEDTSRVLSRL--VDILMARVER--------HHSIVDLANCATIPV 143 (339)
T ss_dssp HHHHHHHHHTTCEEEEECCC-CCS-----SSSSCHHHHHHHHHHH--CSEEEEECSS--------HHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHcCCeEEEeCcccccC-----CCCcCHHHHHHHHHHh--CCEEEEecCc--------HHHHHHHHHhCCCCE
Confidence 3443 3456799999887654322 2235667777766653 4566665543 678888888899998
Q ss_pred EEccCCCCHHH-----HHHHHHHh--C--CCCCcEEEEcCC
Q 022336 252 IRHRVKKPAGT-----AEEIEKHF--G--CQSSQLIMVDMC 283 (299)
Q Consensus 252 I~ha~KKP~p~-----le~alk~l--G--i~PeEiamVGDr 283 (299)
|--....-+|. +..+.+++ | ++--.+++|||-
T Consensus 144 INag~~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~ 184 (339)
T 4a8t_A 144 INGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA 184 (339)
T ss_dssp EECCCSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSC
T ss_pred EECCCCCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCC
Confidence 86543333442 55677787 6 566789999995
No 230
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=43.04 E-value=26 Score=33.96 Aligned_cols=89 Identities=10% Similarity=0.223 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHhcCCCCcCCccccCCcCCCCHHHHHHcCCcEEEEe---------ccCeeecCCCcccCchHHHHHHH
Q 022336 142 INVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFD---------KDNTLTAPYSLTLWGPLSSSIEQ 212 (299)
Q Consensus 142 ~N~~gi~~~~~~~~~~p~ll~P~~~v~sI~~Id~~~Lk~~GIRaLVlD---------~DNTLT~p~~~~l~Pgv~e~L~~ 212 (299)
||-+-|...+..+.. .-|++.|++.|++| -||.+. +....++.|+....+.
T Consensus 33 i~e~~i~~~ad~~~~-------------------~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~-~~~~kFP~Gl~~l~~~ 92 (404)
T 3hg3_A 33 ISEKLFMEMAELMVS-------------------EGWKDAGYEYLCIDDCWMAPQRDSEGRLQ-ADPQRFPHGIRQLANY 92 (404)
T ss_dssp SSHHHHHHHHHHHHH-------------------TTHHHHTCCEEECCSSCBCSSCCTTSCCC-BCTTTSTTHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-------------------CCcHhhCCeEEEECCCcCCCCCCCCCCee-eChhhcCCCHHHHHHH
Confidence 566777776665432 23677899999998 367777 4555566678888888
Q ss_pred HHHhCCCcEEEEeCCCCCC-------CCCccHHHHHHHHHHcCCcEEE
Q 022336 213 CKSVFGHDIAVFSNSAGLY-------EYDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 213 Lke~fGikVaIVSNnaGs~-------~~d~~~e~a~~~lk~LGI~vI~ 253 (299)
+++. |++++|-+.- |.. .+..-...++.+ +..||+++-
T Consensus 93 ih~~-Glk~Giw~~~-g~~tC~~~pGs~~~~~~da~~f-a~WGvDylK 137 (404)
T 3hg3_A 93 VHSK-GLKLGIYADV-GNKTCAGFPGSFGYYDIDAQTF-ADWGVDLLK 137 (404)
T ss_dssp HHHT-TCEEEEEEES-SSBCTTSSBCCTTCHHHHHHHH-HHHTCCEEE
T ss_pred HHHC-CCeeEEEecC-CccccCCCCccHHHHHHHHHHH-HHhCCcEEE
Confidence 9987 9999998763 221 122223345554 568998874
No 231
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=42.92 E-value=44 Score=27.14 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=50.6
Q ss_pred cCCccccCCc-----------CCCCHHHHHHcCCcEEEEeccCeeecCCCccc-CchHHHHHHHHHHhCCCc-EEEEeCC
Q 022336 161 ALPHVTVPDI-----------RYIDWAELQRRGFKGVVFDKDNTLTAPYSLTL-WGPLSSSIEQCKSVFGHD-IAVFSNS 227 (299)
Q Consensus 161 l~P~~~v~sI-----------~~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l-~Pgv~e~L~~Lke~fGik-VaIVSNn 227 (299)
-.|++..++. ..++++.+. +|-++|++..=++-+ +.-..- .|.+.+..+++++. |+. |+.||-.
T Consensus 12 ~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~-~gk~vvl~~~~a~wc-p~C~~eh~p~l~~~~~~~~~~-g~~~vv~Is~d 88 (171)
T 2pwj_A 12 AASNVSLQKARTWDEGVESKFSTTPVNDIF-KDKKVVIFGLPGAYT-GVCSSKHVPPYKHNIDKFKAK-GVDSVICVAIN 88 (171)
T ss_dssp CSSSBCCCSCEECCCSSCTTCCCEEHHHHH-TTSEEEEEECSCTTC-TTHHHHTHHHHHHTHHHHHHT-TCSEEEEEESS
T ss_pred cCCCeEEecccccccCCccCcceEEHHHHh-CCCCEEEEEecCCCC-CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 3688888776 346666642 354677777666666 333322 35555666677776 899 8888865
Q ss_pred CCCCCCCccHHHHHHHHHHcCC
Q 022336 228 AGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 228 aGs~~~d~~~e~a~~~lk~LGI 249 (299)
. ...++.+.++.|+
T Consensus 89 ~--------~~~~~~~~~~~~~ 102 (171)
T 2pwj_A 89 D--------PYTVNAWAEKIQA 102 (171)
T ss_dssp C--------HHHHHHHHHHTTC
T ss_pred C--------HHHHHHHHHHhCC
Confidence 4 5677888888875
No 232
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=42.79 E-value=14 Score=35.56 Aligned_cols=71 Identities=17% Similarity=0.172 Sum_probs=33.0
Q ss_pred HHHHcCCcEEE-EeccCeeecCC--CcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEE
Q 022336 177 ELQRRGFKGVV-FDKDNTLTAPY--SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 177 ~Lk~~GIRaLV-lD~DNTLT~p~--~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ 253 (299)
.|++.|+++++ .|.-++|-.|- +....+..-..++++++...-.+-|+-.... ....++.+++++|++++.
T Consensus 190 lL~~~Gi~v~~l~d~s~~ld~~~~~~~~~~~~gg~~~~ei~~~~~A~~niv~~~~~------~~~~A~~Le~~~GiP~~~ 263 (458)
T 1mio_B 190 LFEAMDIPYIMFPDTSGVLDGPTTGEYKMYPEGGTKIEDLKDTGNSDLTLSLGSYA------SDLGAKTLEKKCKVPFKT 263 (458)
T ss_dssp HHHHHTCCEEESSCCTTTSSCCCCSSCCSSCSCSBCHHHHHTTSSCSEEEEESHHH------HHHHHHHHHHHSCCCEEE
T ss_pred HHHHcCCcEEEeccccccccCcccCccceeCCCCCcHHHHHhhccCCEEEEEchhh------HHHHHHHHHHHhCCCEEe
Confidence 45678999886 46544443222 1122221111233333331223333322210 034667777788887764
No 233
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=42.16 E-value=75 Score=24.04 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=55.8
Q ss_pred cCCccccCCcCC--CCHHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHH
Q 022336 161 ALPHVTVPDIRY--IDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS 238 (299)
Q Consensus 161 l~P~~~v~sI~~--Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e 238 (299)
-.|++.+.++.. +++..+ .| |.+++++=.+-. +......+.+.+..+++... |+.++.|+.... ..+
T Consensus 7 ~~p~~~l~~~~g~~~~l~~~--~g-k~~lv~f~~~~C-~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~------~~~ 75 (153)
T 2l5o_A 7 TAPAFSLPDLHGKTVSNADL--QG-KVTLINFWFPSC-PGCVSEMPKIIKTANDYKNK-NFQVLAVAQPID------PIE 75 (153)
T ss_dssp TCCSCEEECTTSCEEEHHHH--TT-CEEEEEEECTTC-TTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTS------CHH
T ss_pred CCCCcEeecCCCCCccHHHh--CC-CEEEEEEECCCC-ccHHHHHHHHHHHHHHhccC-CeEEEEEecCCC------CHH
Confidence 368888877654 455554 34 667777655544 33333334444444444443 567777764321 256
Q ss_pred HHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 022336 239 KARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMV 280 (299)
Q Consensus 239 ~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiamV 280 (299)
.++.+.+.+|+++-....... .+.+.+|+..--.++|
T Consensus 76 ~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~i~~~P~~~l 112 (153)
T 2l5o_A 76 SVRQYVKDYGLPFTVMYDADK-----AVGQAFGTQVYPTSVL 112 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSSC-----HHHHHHTCCSSSEEEE
T ss_pred HHHHHHHHcCCCceEEcCchH-----HHHHHcCCCccCeEEE
Confidence 778888888875322111111 3566778754334333
No 234
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=42.02 E-value=81 Score=24.70 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=37.2
Q ss_pred chHHHHHHHHHHh---CCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCH
Q 022336 204 GPLSSSIEQCKSV---FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA 260 (299)
Q Consensus 204 Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~ 260 (299)
..+..|+.++.+. .+.+++||=|+..+.......+.+..+.+.++++++.-+.+...
T Consensus 104 ~~~~~~~~~i~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~ 163 (195)
T 1x3s_A 104 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCD 163 (195)
T ss_dssp HTHHHHHHHHTTCCSCSCCEEEEEEECTTSSSCCSCHHHHHHHHHHTTCEEEECCTTTCT
T ss_pred HHHHHHHHHHHHhcCcCCCcEEEEEECCcCcccccCHHHHHHHHHHcCCEEEEecCCCCC
Confidence 3455677776552 15788999999855332334567778888889887766554443
No 235
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=41.98 E-value=1.1e+02 Score=23.90 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=45.2
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEE
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ 253 (299)
.++....=.+|+|.++.- -.+.+..|+..+.+.. +.+++||-|+..+... ......++.+.+.++++++.
T Consensus 85 ~~~~~d~~i~v~d~~~~~-------s~~~~~~~~~~i~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 157 (196)
T 3tkl_A 85 YYRGAHGIIVVYDVTDQE-------SFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLE 157 (196)
T ss_dssp HHTTCSEEEEEEETTCHH-------HHHTHHHHHHHHHHHSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCCEEE
T ss_pred HHhhCCEEEEEEECcCHH-------HHHHHHHHHHHHHHhcCCCCCEEEEEECcccccccccCHHHHHHHHHHcCCcEEE
Confidence 333344445666655421 1234556666665432 5789999999854321 12346778888899998876
Q ss_pred ccCCCC
Q 022336 254 HRVKKP 259 (299)
Q Consensus 254 ha~KKP 259 (299)
-+.+..
T Consensus 158 ~Sa~~g 163 (196)
T 3tkl_A 158 TSAKNA 163 (196)
T ss_dssp ECTTTC
T ss_pred EeCCCC
Confidence 655444
No 236
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=41.96 E-value=1.1e+02 Score=23.35 Aligned_cols=69 Identities=14% Similarity=0.058 Sum_probs=40.8
Q ss_pred cEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 184 RaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
=.+|+|.++-- -...+.+|+..+.+. .+.+++||-|+..+... ....+.++.+.+.+|++++.-+.+..
T Consensus 81 ~i~v~d~~~~~-------s~~~~~~~~~~l~~~~~~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~g 153 (175)
T 2nzj_A 81 YVIVYSIADRG-------SFESASELRIQLRRTHQADHVPIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQ 153 (175)
T ss_dssp EEEEEETTCHH-------HHHHHHHHHHHHHHCC----CCEEEEEECTTCTTTCCSCHHHHHHHHHHHTSEEEECBTTTT
T ss_pred EEEEEECCCHH-------HHHHHHHHHHHHHHhhccCCCCEEEEEEChhhccccccCHHHHHHHHHHcCCeEEEEecCCC
Confidence 35677776421 123455666666542 26789999999855321 12345666777788888776655443
No 237
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=41.89 E-value=40 Score=29.01 Aligned_cols=52 Identities=19% Similarity=0.218 Sum_probs=33.6
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
++.|++.||.+|++|.+- ..+.-..+ ..+...+.+.|.+. |. +|++++...+
T Consensus 81 ~~~l~~~~iPvV~~~~~~--~~~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~~ 137 (294)
T 3qk7_A 81 LQYLQKQNFPFLALGRSH--LPKPYAWFDFDNHAGASLAVKRLLEL-GHQRIAFVSTDAR 137 (294)
T ss_dssp HHHHHHTTCCEEEESCCC--CSSCCEEEEECHHHHHHHHHHHHHHT-TCCCEEEEEESSC
T ss_pred HHHHHhCCCCEEEECCCC--CCCCCCEEEcChHHHHHHHHHHHHHC-CCceEEEEeCCcc
Confidence 456788999999999862 11111111 23455667777776 76 6999987753
No 238
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=41.80 E-value=1.8e+02 Score=27.43 Aligned_cols=92 Identities=12% Similarity=0.047 Sum_probs=57.4
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-+.+=. + -.+.+.+..+-+..- ..++++--.. ...++.+++..++|+|--..
T Consensus 91 A~~~LGg~vi~l~~~~ss~--~---kgEsl~DTarvLs~y--~D~IviR~~~--------~~~~~~lA~~~~vPVINag~ 155 (340)
T 4ep1_A 91 GMVQLGGHGMFLNGKEMQM--G---RGETVSDTAKVLSHY--IDGIMIRTFS--------HADVEELAKESSIPVINGLT 155 (340)
T ss_dssp HHHHTTCEEEEEESCC-----------CCTTHHHHHHHHH--CSEEEEECSC--------HHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHcCCeEEEcCcccccC--C---CCCCHHHHHHHHHHh--CCEEEEecCC--------hhHHHHHHHhCCCCEEeCCC
Confidence 3456799999888654322 1 123444555555442 4555555443 67888888889999885433
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||-
T Consensus 156 ~~~HPtQaLaDl~TI~E~~G~l~glkva~vGD~ 188 (340)
T 4ep1_A 156 DDHHPCQALADLMTIYEETNTFKGIKLAYVGDG 188 (340)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 33334 2 556778888 677789999995
No 239
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=41.39 E-value=1.6e+02 Score=25.09 Aligned_cols=72 Identities=8% Similarity=0.043 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCC---CCCccHH-----HHHHHHHHcCCc---EEEccCCCC-----HHHHHHHHHHhC
Q 022336 208 SSIEQCKSVFGHDIAVFSNSAGLY---EYDNDAS-----KARKLEGKIGIK---VIRHRVKKP-----AGTAEEIEKHFG 271 (299)
Q Consensus 208 e~L~~Lke~fGikVaIVSNnaGs~---~~d~~~e-----~a~~~lk~LGI~---vI~ha~KKP-----~p~le~alk~lG 271 (299)
+.++.+++. |++++++.+..+.. ....+.. .++.+.+ .|-. ++.....-+ ..+|.++++..|
T Consensus 97 ~~~~~l~~~-~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~-~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g 174 (305)
T 3huu_A 97 PIEHLLNEF-KVPYLIVGKSLNYENIIHIDNDNIDAAYQLTQYLYH-LGHRHILFLQESGHYAVTEDRSVGFKQYCDDVK 174 (305)
T ss_dssp HHHHHHHHT-TCCEEEESCCCSSTTCCEEECCHHHHHHHHHHHHHH-TTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHc-CCCEEEECCCCcccCCcEEEeCHHHHHHHHHHHHHH-CCCCeEEEEcCCcccchhHHHHHHHHHHHHHcC
Confidence 456677776 99999887764221 1111222 2232322 3532 332211111 125889999999
Q ss_pred CCCCcEEEEcC
Q 022336 272 CQSSQLIMVDM 282 (299)
Q Consensus 272 i~PeEiamVGD 282 (299)
++... ++.||
T Consensus 175 ~~~~~-~~~~~ 184 (305)
T 3huu_A 175 ISNDC-VVIKS 184 (305)
T ss_dssp CCCCE-EEECS
T ss_pred CCccc-EEecC
Confidence 98877 66665
No 240
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=40.57 E-value=77 Score=25.29 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=45.3
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC--CCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEc
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF--GHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~h 254 (299)
++....=.+|+|.++. .-...+..|+..+++.. +.+++||-|+..+.. .....+.++.+++.+|++++.-
T Consensus 93 ~~~~d~iilV~d~~~~-------~s~~~~~~~~~~i~~~~~~~~piiiv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~ 165 (192)
T 2fg5_A 93 YRGSAAAVIVYDITKQ-------DSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVET 165 (192)
T ss_dssp HTTCSEEEEEEETTCT-------HHHHHHHHHHHHHHHHSCTTCEEEEEEECGGGGGGCCSCHHHHHHHHHTTTCEEEEC
T ss_pred hccCCEEEEEEeCCCH-------HHHHHHHHHHHHHHHhCCCCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEEEE
Confidence 3334444566675441 11234566777776532 578999999985432 1223467788888889887766
Q ss_pred cCCCC
Q 022336 255 RVKKP 259 (299)
Q Consensus 255 a~KKP 259 (299)
+.+..
T Consensus 166 Sa~~~ 170 (192)
T 2fg5_A 166 SAKNA 170 (192)
T ss_dssp BTTTT
T ss_pred eCCCC
Confidence 55443
No 241
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=40.50 E-value=1.5e+02 Score=28.07 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=62.9
Q ss_pred CCHH-HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE
Q 022336 173 IDWA-ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 173 Id~~-~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v 251 (299)
++|+ ..++.|-.++.||-+++=. .-.+.+.+..+-|.. + ..++++--.. ...++.+++..++|+
T Consensus 57 ~SFE~A~~~LGg~vi~l~~~~ssl-----~kgEsl~DTarvLs~-y-~D~IviR~~~--------~~~~~~lA~~~~vPV 121 (355)
T 4a8p_A 57 VSFETAMEQLGGHGEYLAPGQIQL-----GGHETIEDTSRVLSR-L-VDILMARVER--------HHSIVDLANCATIPV 121 (355)
T ss_dssp HHHHHHHHHTTCEEEEECBTTBCB-----TTTBCHHHHHHHHTT-T-CSEEEEECSS--------HHHHHHHHHHCSSCE
T ss_pred hhHHHHHHHcCCeEEEeCcccccC-----CCCcCHHHHHHHHHH-h-CCEEEEecCc--------HHHHHHHHHhCCCCE
Confidence 3443 3456799999888654322 223566777776654 3 4566665543 678888888899998
Q ss_pred EEccCCCCHHH-----HHHHHHHh--C--CCCCcEEEEcCC
Q 022336 252 IRHRVKKPAGT-----AEEIEKHF--G--CQSSQLIMVDMC 283 (299)
Q Consensus 252 I~ha~KKP~p~-----le~alk~l--G--i~PeEiamVGDr 283 (299)
|--....-+|. +..+.+++ | ++--.+++|||-
T Consensus 122 INag~~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~ 162 (355)
T 4a8p_A 122 INGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA 162 (355)
T ss_dssp EECCCSSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCC
T ss_pred EeCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCC
Confidence 86543333442 45677777 6 566789999995
No 242
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=40.47 E-value=1.7e+02 Score=27.38 Aligned_cols=92 Identities=8% Similarity=0.033 Sum_probs=60.3
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-.++=. .-.+.+.+..+-|..- ..++++-... ...++.+++..++|++--..
T Consensus 66 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvLs~~--~D~IviR~~~--------~~~~~~lA~~s~vPVINa~~ 130 (335)
T 1dxh_A 66 AAYDQGANVTYIDPNSSQI-----GHKESMKDTARVLGRM--YDAIEYRGFK--------QEIVEELAKFAGVPVFNGLT 130 (335)
T ss_dssp HHHHTTCEEEEECTTTCCB-----TTTBCHHHHHHHHHHH--CSEEEEECSC--------HHHHHHHHHHSSSCEEEEEC
T ss_pred HHHHcCCeEEEECCccccC-----cCCCcHHHHHHHHHhh--CCEEEEecCC--------hhHHHHHHHhCCCCEEcCCC
Confidence 3456788888888654322 1235666777666663 3566665543 67888898889999886433
Q ss_pred CCCHH--H---HHHHHHHhC--CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG--CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG--i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||.
T Consensus 131 ~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~ 164 (335)
T 1dxh_A 131 DEYHPTQMLADVLTMREHSDKPLHDISYAYLGDA 164 (335)
T ss_dssp SSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCC
T ss_pred CCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCC
Confidence 33344 2 556777777 455679999995
No 243
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=40.06 E-value=43 Score=28.42 Aligned_cols=45 Identities=4% Similarity=-0.050 Sum_probs=26.9
Q ss_pred HHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
.+.||.+|++|.+.. .-..+ ......+.+.|.+. |. +|++++...
T Consensus 88 ~~~~iPvV~~~~~~~----~~~~V~~D~~~~~~~a~~~L~~~-G~~~i~~i~~~~ 137 (289)
T 3g85_A 88 ASLTLPIILFNRLSN----KYSSVNVDNYKMGEKASLLFAKK-RYKSAAAILTES 137 (289)
T ss_dssp CCCSSCEEEESCCCS----SSEEEEECHHHHHHHHHHHHHHT-TCCBCEEEECCC
T ss_pred ccCCCCEEEECCCCC----CCCEEEeCHHHHHHHHHHHHHHc-CCCEEEEEeCCc
Confidence 346788888887531 11111 23445666677776 65 688888765
No 244
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=40.01 E-value=1.2e+02 Score=23.61 Aligned_cols=75 Identities=9% Similarity=0.087 Sum_probs=46.6
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH---hCCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcE
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS---VFGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke---~fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~v 251 (299)
..++....=.+|+|.++--. ...+.+|+..+.+ ..+.+++||-|+..+.. .....+.++.+.+.+++++
T Consensus 85 ~~~~~~d~~i~v~d~~~~~s-------~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~ 157 (183)
T 3kkq_A 85 QYMRTGDGFLIVYSVTDKAS-------FEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPY 157 (183)
T ss_dssp HHHHHCSEEEEEEETTCHHH-------HHTHHHHHHHHHHHHTSSCCCEEEEEECTTCSTTCCSCHHHHHHHHHHHTCCE
T ss_pred HHHhcCCEEEEEEECCCHHH-------HHHHHHHHHHHHHhcCCCCCcEEEEEECCCchhccCcCHHHHHHHHHHhCCeE
Confidence 44555555667777765211 2334555555433 23678999999985432 1234567888889999888
Q ss_pred EEccCC
Q 022336 252 IRHRVK 257 (299)
Q Consensus 252 I~ha~K 257 (299)
+.-+.+
T Consensus 158 ~~~Sa~ 163 (183)
T 3kkq_A 158 IETSAK 163 (183)
T ss_dssp EEEBCS
T ss_pred EEeccC
Confidence 766655
No 245
>2inb_A Hypothetical protein; ZP_00107633.1, structural genomics, PS protein structure initiative, joint center for structural G JCSG; HET: MSE GOL; 1.60A {Nostoc punctiforme} SCOP: c.52.1.32 PDB: 2okf_A*
Probab=40.01 E-value=3.1 Score=35.16 Aligned_cols=56 Identities=27% Similarity=0.434 Sum_probs=45.3
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHhcCC----CCcCCccccCCcCCCCH--HHHHHcCCcEEEEeccC
Q 022336 132 SQLKAALGQRINVEGIVSSTVVFAKDR----HLALPHVTVPDIRYIDW--AELQRRGFKGVVFDKDN 192 (299)
Q Consensus 132 ~~~~~~~~q~~N~~gi~~~~~~~~~~p----~ll~P~~~v~sI~~Id~--~~Lk~~GIRaLVlD~DN 192 (299)
.|+..|+||-+|...++.- .+| =|.+|...+.++++.++ ..+++..++.||+|...
T Consensus 71 ~df~~AlGQf~~Yr~~L~~-----~ePeR~LYLAVp~~iY~~fF~~~~~Q~ii~~~qikLIV~D~~~ 132 (140)
T 2inb_A 71 SEFHTALGQFINYRGALRR-----RQPERVLYLAVPLTTYKTFFQLDFPKEMIAENQVKMLIYDVEQ 132 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHT-----TCTTEEEEEEEEHHHHHTGGGSHHHHHHHHHTTCCEEEEETTT
T ss_pred HHHHHHHHHHHHHHHHHHh-----hCCCceEEEEecHHHHHHHHhhHHHHHHHHhcCceEEEECCCc
Confidence 6899999999999876652 355 35679999999999887 45678899999999753
No 246
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=39.77 E-value=1.8e+02 Score=27.69 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=61.7
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||..++=. .-.+.+.+..+-|..- ..++++-... ...++.+++..++|++--..
T Consensus 92 A~~~LGg~vi~l~~~~ss~-----~kgEsl~DTarvLs~~--~D~IviR~~~--------~~~~~~lA~~s~vPVINa~~ 156 (365)
T 4amu_A 92 AASDLGAGVTYIGPSGSNM-----GKKESIEDTAKVLGRF--YDGIEFRGFA--------QSDVDALVKYSGVPVWNGLT 156 (365)
T ss_dssp HHHHHTCEEEEECHHHHCC-----SSSSCHHHHHHHHHHH--CSEEEEECSC--------HHHHHHHHHHHCSCEEEEEC
T ss_pred HHHhCCCEEEEcCCccccC-----CCCcCHHHHHHHHHhh--CcEEEEecCC--------hhHHHHHHHhCCCCEEeCCC
Confidence 3456799999887665433 2235667777766663 4666665443 56788888888999885433
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCCc
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMCR 284 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDrl 284 (299)
..-+| . +..+.+++| ++--.+++|||-.
T Consensus 157 ~~~HPtQaLaDl~Ti~E~~G~l~glkva~vGD~~ 190 (365)
T 4amu_A 157 DDEHPTQIIADFMTMKEKFGNLKNKKIVFIGDYK 190 (365)
T ss_dssp SSCCHHHHHHHHHHHHHHHSSCTTCEEEEESSTT
T ss_pred CCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCC
Confidence 33334 2 556777887 6777899999973
No 247
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=39.24 E-value=43 Score=33.01 Aligned_cols=67 Identities=6% Similarity=0.036 Sum_probs=37.5
Q ss_pred HHHHcCCcEEE-Ee----ccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCC-CCCCCCCccHHHHHHHHHHcCCc
Q 022336 177 ELQRRGFKGVV-FD----KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNS-AGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 177 ~Lk~~GIRaLV-lD----~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNn-aGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
.|++.|+++++ .| +||-++..+.......-.+-|+.+-++ .+-|+-.. .| ...++.+++++|++
T Consensus 239 lL~~~Gi~v~~lpd~s~~ld~~~~~~~~~~~gg~~~~ei~~~~~A---~~niv~~~~~~-------~~~A~~Le~r~GiP 308 (519)
T 1qgu_B 239 MMEQMAVPCSLLSDPSEVLDTPADGHYRMYSGGTTQQEMKEAPDA---IDTLLLQPWQL-------LKSKKVVQEMWNQP 308 (519)
T ss_dssp HHHHHTCCEEESSCTTTTTSCCCSSCCCSCCCCBCHHHHHHGGGE---EEEEESSTTTC-------HHHHHHHHHTSCCC
T ss_pred HHHHcCCeEEEecCccccccCcccCcccccCCCCCHHHHHhhhcC---CEEEEECHHHH-------HHHHHHHHHHcCCC
Confidence 45678999874 45 466665333333322334444444332 44443332 22 56778888889998
Q ss_pred EEE
Q 022336 251 VIR 253 (299)
Q Consensus 251 vI~ 253 (299)
++.
T Consensus 309 ~i~ 311 (519)
T 1qgu_B 309 ATE 311 (519)
T ss_dssp CCC
T ss_pred eEe
Confidence 774
No 248
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=38.66 E-value=2.4e+02 Score=26.07 Aligned_cols=92 Identities=13% Similarity=0.099 Sum_probs=60.6
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-+.+=. .-.+.+.+..+-+..- ..++++--.. ...++.+++..++|++--..
T Consensus 66 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvls~~--~D~iviR~~~--------~~~~~~lA~~~~vPVINag~ 130 (309)
T 4f2g_A 66 GIFQLGGHAVFMSTRDTQL-----GRGEPVEDSAQVISRM--VDIIMIRTFE--------QDIIQRFAENSRVPVINGLT 130 (309)
T ss_dssp HHHHTTCEEEEECCSSCEE-----TBEECHHHHHHHHHHH--CSEEEEECSC--------HHHHHHHHHTCSSCEEEEEC
T ss_pred HHHHcCCeEEEcCcccccC-----CCCCCHHHHHHHHHHh--CCEEEEecCC--------HHHHHHHHHhCCCCEEECCC
Confidence 3456799999888654322 2235666777666653 4666665543 57788888888999885433
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||.
T Consensus 131 ~~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~ 163 (309)
T 4f2g_A 131 NEYHPCQVLADIFTYYEHRGPIRGKTVAWVGDA 163 (309)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CccCcHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 33334 2 556777887 566779999994
No 249
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=38.50 E-value=61 Score=27.32 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=29.0
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCccc--CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTL--WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l--~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
+.|++.||.+|++|.+-.-.....+.. ......+.+.|.+. |. +|++++...
T Consensus 93 ~~~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~-G~~~i~~i~~~~ 147 (298)
T 3tb6_A 93 LNLEKNGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLSL-GHTHMMGIFKAD 147 (298)
T ss_dssp HHHHHTTCCEEEESSCCTTCSSCEEEECHHHHHHHHHHHHHHT-TCCSEEEEEESS
T ss_pred HHHHhcCCCEEEEecCcCCCCCCEEEeCcHHHHHHHHHHHHHC-CCCcEEEEcCCC
Confidence 456677888888876421110011111 23445566677776 65 688887654
No 250
>4dkx_A RAS-related protein RAB-6A; GTP binding fold, membrane trafficking, GTP, cytosol, protei transport; HET: GDP; 1.90A {Homo sapiens} PDB: 3bbp_A*
Probab=38.43 E-value=60 Score=27.69 Aligned_cols=83 Identities=12% Similarity=0.143 Sum_probs=49.4
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVK 257 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~K 257 (299)
...=.+++|+++--+ ...+..|+..+++.. +++++||-|+..+... ....+.++.+++.+|+.++.-+.|
T Consensus 86 a~~~ilv~di~~~~S-------f~~i~~~~~~i~~~~~~~~piilVgNK~Dl~~~r~V~~~e~~~~a~~~~~~~~e~SAk 158 (216)
T 4dkx_A 86 SAAAVVVYDITNVNS-------FQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAK 158 (216)
T ss_dssp CSEEEEEEETTCHHH-------HHTHHHHHHHHHHHHTTSSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEEEBTT
T ss_pred ccEEEEEeecchhHH-------HHHHHHHHHHHHHhcCCCCeEEEEeeccchHhcCcccHHHHhhHHHHhCCeeEEEeCC
Confidence 334455555554322 345677777766432 4689999999854321 224567889999999987765543
Q ss_pred CCHH---HHHHHHHHh
Q 022336 258 KPAG---TAEEIEKHF 270 (299)
Q Consensus 258 KP~p---~le~alk~l 270 (299)
.-.. .|+.+++.+
T Consensus 159 tg~nV~e~F~~i~~~i 174 (216)
T 4dkx_A 159 AGYNVKQLFRRVAAAL 174 (216)
T ss_dssp TTBSHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHH
Confidence 3322 145555443
No 251
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=38.38 E-value=1.2e+02 Score=25.69 Aligned_cols=51 Identities=20% Similarity=0.137 Sum_probs=30.1
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
.+.|++.|+.+|++|.+-. .+.-..+ ..+...+.+.|.+. |. +|++++...
T Consensus 80 ~~~l~~~~iPvV~~~~~~~--~~~~~~V~~D~~~~g~~a~~~L~~~-G~~~I~~i~~~~ 135 (287)
T 3bbl_A 80 VQFLLKQKFPFVAFGRSNP--DWDFAWVDIDGTAGTRQAVEYLIGR-GHRRIAILAWPE 135 (287)
T ss_dssp HHHHHHTTCCEEEESCCST--TCCCCEEEECHHHHHHHHHHHHHHH-TCCCEEEEECCT
T ss_pred HHHHHhcCCCEEEECCcCC--CCCCCEEEeccHHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 3567778999999886421 1111111 13445556667666 65 688888765
No 252
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=38.34 E-value=1.8e+02 Score=24.54 Aligned_cols=44 Identities=9% Similarity=0.003 Sum_probs=30.6
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.+....+.+|++|++= | .....+.++++++..+.+|+++|...
T Consensus 75 ~~~~~~~~DlvllD~~l----p-----~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 75 IKAREDHPDLILLDLGL----P-----DFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHSCCSEEEEECCS----C-----HHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHhcCCCCEEEEcCCC----C-----CCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 44566788999999862 1 12345677777764457899999876
No 253
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=38.06 E-value=1.2e+02 Score=22.47 Aligned_cols=44 Identities=9% Similarity=-0.025 Sum_probs=29.8
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH--h-CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS--V-FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke--~-fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++ . .+.+|+++|+..
T Consensus 46 ~~l~~~~~dlii~d~~l----~~-----~~g~~~~~~l~~~~~~~~~pii~ls~~~ 92 (147)
T 2zay_A 46 PVAVKTHPHLIITEANM----PK-----ISGMDLFNSLKKNPQTASIPVIALSGRA 92 (147)
T ss_dssp HHHHHHCCSEEEEESCC----SS-----SCHHHHHHHHHTSTTTTTSCEEEEESSC
T ss_pred HHHHcCCCCEEEEcCCC----CC-----CCHHHHHHHHHcCcccCCCCEEEEeCCC
Confidence 44566788999999763 11 234567777775 2 257899999876
No 254
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=37.55 E-value=2.1e+02 Score=26.76 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=60.5
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-.++=. .-.+.+.+..+-|.. + ..++++-... ...++.+++..++|++--..
T Consensus 65 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvLs~-~-~D~IviR~~~--------~~~~~~lA~~~~vPVINa~~ 129 (333)
T 1duv_G 65 AAYDQGARVTYLGPSGSQI-----GHKESIKDTARVLGR-M-YDGIQYRGYG--------QEIVETLAEYASVPVWNGLT 129 (333)
T ss_dssp HHHHTTCEEEEECSSSSCB-----TTTBCHHHHHHHHTT-T-CSEEEEECSC--------HHHHHHHHHHHSSCEEESCC
T ss_pred HHHHcCCeEEEECCccccC-----cCCCcHHHHHHHHHH-h-CCEEEEEcCC--------chHHHHHHHhCCCCeEcCCC
Confidence 3456788888887654322 223566677666655 2 4566665544 67888888888999986543
Q ss_pred CCCHHH-----HHHHHHH-hC--CCCCcEEEEcCC
Q 022336 257 KKPAGT-----AEEIEKH-FG--CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p~-----le~alk~-lG--i~PeEiamVGDr 283 (299)
..-+|. +..+.++ +| ++--.+++|||.
T Consensus 130 ~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~ 164 (333)
T 1duv_G 130 NEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDA 164 (333)
T ss_dssp SSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCT
T ss_pred CCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCC
Confidence 334442 5577777 77 455679999995
No 255
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=37.55 E-value=1.5e+02 Score=23.73 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHh---CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSV---FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+.+. .+.+++||-|+..+.. .......++.+.+.+|++++.-+.+.-
T Consensus 112 ~~~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~ 171 (201)
T 3oes_A 112 QVIESLYQKLHEGHGKTRVPVVLVGNKADLSPEREVQAVEGKKLAESWGATFMESSAREN 171 (201)
T ss_dssp HHHHHHHHHHHC-----CCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEECCTTCH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEECccCccccccCHHHHHHHHHHhCCeEEEEeCCCC
Confidence 4455666665432 2578999999985431 122346778888889998877665443
No 256
>1jfx_A 1,4-beta-N-acetylmuramidase M1; beta-alpha-barrel, cellosyl, lysozyme, hydrolase; 1.65A {Streptomyces coelicolor} SCOP: c.1.8.8
Probab=37.50 E-value=55 Score=28.13 Aligned_cols=69 Identities=10% Similarity=0.071 Sum_probs=48.8
Q ss_pred CCCCHHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHc
Q 022336 171 RYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI 247 (299)
Q Consensus 171 ~~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~L 247 (299)
..|||+.+++.|++.+++=. | .+.....|....-++.++++ |+++++.==..... ....+.++.+.+.+
T Consensus 15 g~idw~~v~~~gi~FviiKa----t-eG~~~~D~~f~~n~~~A~~a-Gl~vG~Yhf~~~~~--~~a~~qA~~f~~~~ 83 (217)
T 1jfx_A 15 GSINWSSVKSAGMSFAYIKA----T-EGTNYKDDRFSANYTNAYNA-GIIRGAYHFARPNA--SSGTAQADYFASNG 83 (217)
T ss_dssp CSCCHHHHHHTTCCEEEEEE----E-ETTTEECTTHHHHHHHHHHT-TCEEEEEEECCTTT--SCHHHHHHHHHHTT
T ss_pred CCCCHHHHHhCCCCEEEEEE----e-cCCCccChHHHHHHHHHHHC-CCeEEEEEEeeCCC--CCHHHHHHHHHHHh
Confidence 35999999999999888864 4 45566788899999999997 99876432111000 11256788888887
No 257
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=36.91 E-value=30 Score=34.43 Aligned_cols=93 Identities=10% Similarity=0.186 Sum_probs=63.7
Q ss_pred HhccCCCHHHHHHHHHHHhcCCCCcCCccccCCcCCCCHHHHHHcCCcEEEEe--------ccCeeecCCCcccCchHHH
Q 022336 137 ALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFD--------KDNTLTAPYSLTLWGPLSS 208 (299)
Q Consensus 137 ~~~q~~N~~gi~~~~~~~~~~p~ll~P~~~v~sI~~Id~~~Lk~~GIRaLVlD--------~DNTLT~p~~~~l~Pgv~e 208 (299)
+++..+|-+-|...+..+.. .-|++.|++.|++| -||.+. +....++.|+..
T Consensus 39 ~~~~~i~e~~i~~~Ad~~~~-------------------~Gl~~~GyeyvvIDDGW~~~rd~~G~~~-~d~~kFP~Glk~ 98 (479)
T 3lrk_A 39 TFACDVSEQLLLDTADRISD-------------------LGLKDMGYKYIILDDCWSSGRDSDGFLV-ADEQKFPNGMGH 98 (479)
T ss_dssp HHTTCCCHHHHHHHHHHHHH-------------------TTCGGGTCCEEECCSSCEEEECTTSCEE-ECTTTCTTCHHH
T ss_pred hhCcCCCHHHHHHHHHHHHh-------------------cCccccCceEEEECCccccccCCCCCEe-cChhhcCCCHHH
Confidence 56777888777777776442 13455688888887 678888 555566668888
Q ss_pred HHHHHHHhCCCcEEEEeCC--------CCCCCCCccHHHHHHHHHHcCCcEEE
Q 022336 209 SIEQCKSVFGHDIAVFSNS--------AGLYEYDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 209 ~L~~Lke~fGikVaIVSNn--------aGs~~~d~~~e~a~~~lk~LGI~vI~ 253 (299)
..+.+++. |++++|-+.- +|+ ++.-...++. ....||+++-
T Consensus 99 Lad~ih~~-GlKfGIw~~pG~~tC~~~pGs--l~~~~~da~~-fa~WGVDylK 147 (479)
T 3lrk_A 99 VADHLHNN-SFLFGMYSSAGEYTCAGYPGS--LGREEEDAQF-FANNRVDYLK 147 (479)
T ss_dssp HHHHHHHT-TCEEEEEEESSSBCTTSSBCC--TTCHHHHHHH-HHHTTCCEEE
T ss_pred HHHHHHHC-CCeeEEEecCccccccCCCch--hHHHHHHHHH-HHHhCCcEEE
Confidence 88999997 9999998765 222 2222334443 4568998874
No 258
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=36.91 E-value=89 Score=29.89 Aligned_cols=69 Identities=13% Similarity=0.230 Sum_probs=50.3
Q ss_pred HHhccCCCHHHHHHHHHHHhcCCCCcCCccccCCcCCCCHHHHHHcCCcEEEEec----------------------cCe
Q 022336 136 AALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDK----------------------DNT 193 (299)
Q Consensus 136 ~~~~q~~N~~gi~~~~~~~~~~p~ll~P~~~v~sI~~Id~~~Lk~~GIRaLVlD~----------------------DNT 193 (299)
.+++..+|-+.|...+..+ . +.|++.|++.|++|= .|-
T Consensus 20 ~~~~~~i~e~~i~~~ad~~-~-------------------~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~~~~~~d~~G~ 79 (433)
T 3cc1_A 20 DCYGASVTEEEVLGNAEYM-A-------------------NHLKKYGWEYIVVDIQWYEPTANSSAYNPFAPLCMDEYGR 79 (433)
T ss_dssp HHHTTCCCHHHHHHHHHHH-H-------------------HHTGGGTCCEEEECSCTTCCCTTSTTCCTTSCSCBCTTSC
T ss_pred hhhCCcCCHHHHHHHHHHH-H-------------------hcchhhCCeEEEECCCcCCCCCcccccccccccccCCCCC
Confidence 3678899999999988865 2 356778888888882 234
Q ss_pred eecCCCcccCc-----hHHHHHHHHHHhCCCcEEEEeC
Q 022336 194 LTAPYSLTLWG-----PLSSSIEQCKSVFGHDIAVFSN 226 (299)
Q Consensus 194 LT~p~~~~l~P-----gv~e~L~~Lke~fGikVaIVSN 226 (299)
++ +....++. |+....+++++. |.+++|-+.
T Consensus 80 ~~-~~~~kFP~~~~~~Gl~~l~~~ih~~-Glk~Giw~~ 115 (433)
T 3cc1_A 80 LL-PATNRFPSAKNGAGFKPLSDAIHDL-GLKFGIHIM 115 (433)
T ss_dssp BC-CCTTTCGGGTTTTTTHHHHHHHHHT-TCEEEEEEE
T ss_pred Ee-ECCccCCCcccCCCHHHHHHHHHHc-CCeeEEEeC
Confidence 44 33334444 788889999997 999888763
No 259
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=36.79 E-value=1.2e+02 Score=23.54 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=34.4
Q ss_pred chHHHHHHHHHHh--CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCC
Q 022336 204 GPLSSSIEQCKSV--FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKK 258 (299)
Q Consensus 204 Pgv~e~L~~Lke~--fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KK 258 (299)
..+.+|+..+.+. .+.+++||-|+..+... ....+.++.+.+.+|++++.-+.+.
T Consensus 97 ~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~ 154 (183)
T 2fu5_C 97 DNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKA 154 (183)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEEC--CCSCCCSCHHHHHHHHHHHTCEEEECCC--
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEECccCCccCcCCHHHHHHHHHHcCCeEEEEeCCC
Confidence 4556677776653 25789999999855321 2235677888888998877665443
No 260
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=36.78 E-value=1.4e+02 Score=22.77 Aligned_cols=60 Identities=8% Similarity=-0.063 Sum_probs=36.1
Q ss_pred HHHHHc--CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEE
Q 022336 176 AELQRR--GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (299)
Q Consensus 176 ~~Lk~~--GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI 252 (299)
+.+++. .+.+|++|.+-- + ....+.++++++.. ..+|+++|+.. ...........|+..+
T Consensus 75 ~~l~~~~~~~dliilD~~l~----~-----~~g~~~~~~lr~~~~~~~ii~ls~~~--------~~~~~~~~~~~g~~~~ 137 (157)
T 3hzh_A 75 IKYKNHYPNIDIVTLXITMP----K-----MDGITCLSNIMEFDKNARVIMISALG--------KEQLVKDCLIKGAKTF 137 (157)
T ss_dssp HHHHHHGGGCCEEEECSSCS----S-----SCHHHHHHHHHHHCTTCCEEEEESCC--------CHHHHHHHHHTTCSEE
T ss_pred HHHHhcCCCCCEEEEeccCC----C-----ccHHHHHHHHHhhCCCCcEEEEeccC--------cHHHHHHHHHcCCCEE
Confidence 344555 788999998621 1 23456677776642 46899999876 2223333445677544
No 261
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=36.70 E-value=1.5e+02 Score=23.24 Aligned_cols=56 Identities=13% Similarity=0.001 Sum_probs=35.5
Q ss_pred chHHHHHHHHHHhCCCc-EEEEeCCCCCCCCCccHHHHHHHHHHcCC--cEEEccCCCCHHHHHHHHHHhCCC
Q 022336 204 GPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGI--KVIRHRVKKPAGTAEEIEKHFGCQ 273 (299)
Q Consensus 204 Pgv~e~L~~Lke~fGik-VaIVSNnaGs~~~d~~~e~a~~~lk~LGI--~vI~ha~KKP~p~le~alk~lGi~ 273 (299)
|.+.+..+++++. |+. |+.||-.. .+.++.+.+++|+ ++-.... +. .++.+.+|+.
T Consensus 57 ~~l~~~~~~~~~~-~v~~vv~Is~d~--------~~~~~~~~~~~~~~~~~~~l~D--~~---~~~~~~~gv~ 115 (162)
T 1tp9_A 57 PGFIEKAGELKSK-GVTEILCISVND--------PFVMKAWAKSYPENKHVKFLAD--GS---ATYTHALGLE 115 (162)
T ss_dssp HHHHHHHHHHHHT-TCCCEEEEESSC--------HHHHHHHHHTCTTCSSEEEEEC--TT---SHHHHHTTCE
T ss_pred HHHHHHHHHHHHC-CCCEEEEEECCC--------HHHHHHHHHhcCCCCCeEEEEC--CC---chHHHHcCcc
Confidence 4455556666665 899 99888654 5677888888887 4422221 21 2456777874
No 262
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=36.64 E-value=1.3e+02 Score=25.68 Aligned_cols=52 Identities=23% Similarity=0.165 Sum_probs=31.6
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc--CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL--WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l--~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
++.|++ |+.+|++|.+-.- .-..+.. ..+...+.+.|.+. |. +|++++...+
T Consensus 88 ~~~l~~-~iPvV~i~~~~~~-~~~~V~~D~~~~g~~a~~~L~~~-G~~~I~~i~~~~~ 142 (303)
T 3kke_A 88 LAAVLE-GVPAVTINSRVPG-RVGSVILDDQKGGGIATEHLITL-GHSRIAFISGTAI 142 (303)
T ss_dssp HHHHHT-TSCEEEESCCCTT-CCCEEEECHHHHHHHHHHHHHHT-TCCSEEEEESCSS
T ss_pred HHHHhC-CCCEEEECCcCCC-CCCEEEECcHHHHHHHHHHHHHC-CCCeEEEEeCCCc
Confidence 456777 9999999865321 0111111 23455666777776 76 6999987653
No 263
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=36.58 E-value=74 Score=26.27 Aligned_cols=37 Identities=8% Similarity=0.190 Sum_probs=26.6
Q ss_pred chHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHH
Q 022336 204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKAR 241 (299)
Q Consensus 204 Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~ 241 (299)
+.+.+.|+++.+. +..++|.|+..|.+.+|...+.+.
T Consensus 56 ~~I~~~l~~a~~~-~~DlVittGG~g~~~~D~t~ea~~ 92 (167)
T 2g2c_A 56 DTVVEAIATALKQ-GARFIITAGGTGIRAKNQTPEATA 92 (167)
T ss_dssp HHHHHHHHHHHHT-TCSEEEEESCCSSSTTCCHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCEEEECCCCCCCCCcChHHHHH
Confidence 4566777777664 579999999998887776555443
No 264
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=36.24 E-value=46 Score=28.50 Aligned_cols=67 Identities=10% Similarity=0.074 Sum_probs=48.3
Q ss_pred CCCHHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEE--eCCCCCCCCCccHHHHHHHHHHcC
Q 022336 172 YIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVF--SNSAGLYEYDNDASKARKLEGKIG 248 (299)
Q Consensus 172 ~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIV--SNnaGs~~~d~~~e~a~~~lk~LG 248 (299)
.|||+.+++.|++.+++=. | .+.....|....-++.++++ |+++++. +.-. . ....+.|+.+.+.++
T Consensus 15 ~idw~~v~~~gi~FviiKa----t-eG~~~~D~~f~~n~~~A~~a-Gl~vG~Yhf~~~~-~---~~a~~qA~~f~~~~~ 83 (210)
T 2x8r_A 15 SVNFEAAKKDGAQFVMIKA----T-EGTTYKDTVFNSHYTGATKA-GLLRGGYHFARPD-K---STGSTQAKFFLKNGG 83 (210)
T ss_dssp CCCHHHHHHTTEEEEEEEE----E-ETTTEECTTHHHHHHHHHHT-TCEEEEEEECCTT-S---SCHHHHHHHHHTTTC
T ss_pred CCCHHHHHhCCCcEEEEEE----e-cCCCccChHHHHHHHHHHHC-CCeeEEEEEeecC-C---CcHHHHHHHHHHHhc
Confidence 5899999999999888764 4 45566788889999999997 9987643 2211 0 012567888888864
No 265
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=35.92 E-value=1.2e+02 Score=25.62 Aligned_cols=52 Identities=13% Similarity=0.029 Sum_probs=33.5
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
.+.|++.||.+|++|.+-.- +.-..+ ..+...+.+.|.+. |. +|++++...+
T Consensus 82 ~~~l~~~~iPvV~i~~~~~~--~~~~~V~~D~~~~g~~a~~~L~~~-G~~~I~~i~~~~~ 138 (288)
T 3gv0_A 82 VRFMTERNMPFVTHGRSDMG--IEHAFHDFDNEAYAYEAVERLAQC-GRKRIAVIVPPSR 138 (288)
T ss_dssp HHHHHHTTCCEEEESCCCSS--CCCEEEEECHHHHHHHHHHHHHHT-TCCEEEEECCCTT
T ss_pred HHHHhhCCCCEEEECCcCCC--CCCcEEEeCcHHHHHHHHHHHHHC-CCCeEEEEcCCcc
Confidence 46778899999999875211 111111 23456667778776 76 6999987753
No 266
>2wag_A Lysozyme, putative; hydrolase, GH25, lysin; 1.40A {Bacillus anthracis}
Probab=35.84 E-value=46 Score=29.00 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=48.6
Q ss_pred CCCHHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEE--eCCCCCCCCCccHHHHHHHHHHcC
Q 022336 172 YIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVF--SNSAGLYEYDNDASKARKLEGKIG 248 (299)
Q Consensus 172 ~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIV--SNnaGs~~~d~~~e~a~~~lk~LG 248 (299)
.|||+.+++.|++.+++=. | .+.....|...+-++.++++ |+++++. ..... ...+.|+.+.+.++
T Consensus 27 ~idw~~vk~~gi~FviiKa----t-eG~~~~D~~f~~n~~~A~~a-Gl~vG~Yhf~~~~s-----~a~~qA~~f~~~~~ 94 (220)
T 2wag_A 27 DIDWRELEKQNMKFAFIKA----T-EGSAFVDKYFSKNWTNANKT-SMRVGAYHFFSFDS-----KGETQAEQFIRNVP 94 (220)
T ss_dssp SCCHHHHHTTTCCEEEEEE----E-ETTTEECTTHHHHHHHHHTS-SSEEEEEEECCTTS-----CHHHHHHHHHHHSC
T ss_pred CCCHHHHHHCCCCEEEEEE----e-cCCCccChHHHHHHHHHHHC-CCeEEEEEEecCCC-----hHHHHHHHHHHhcc
Confidence 4999999999999888864 4 45566788899999999997 9987754 22211 12567888888764
No 267
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=35.80 E-value=36 Score=32.65 Aligned_cols=94 Identities=14% Similarity=0.249 Sum_probs=62.9
Q ss_pred HhccCCCHHHHHHHHHHHhcCCCCcCCccccCCcCCCCHHHHHHcCCcEEEEec---------cCeeecCCCcccCchHH
Q 022336 137 ALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDK---------DNTLTAPYSLTLWGPLS 207 (299)
Q Consensus 137 ~~~q~~N~~gi~~~~~~~~~~p~ll~P~~~v~sI~~Id~~~Lk~~GIRaLVlD~---------DNTLT~p~~~~l~Pgv~ 207 (299)
+++..+|-+.+...+..+.. .-|++.|++.|++|= .|-++ ++...+..++.
T Consensus 21 ~~~~~~~e~~i~~~ad~~~~-------------------~gl~~~G~~~~~iDdgW~~~~~d~~G~~~-~~~~kFP~Gl~ 80 (417)
T 1szn_A 21 AYHCDIDESKFLSAAELIVS-------------------SGLLDAGYNYVNIDDCWSMKDGRVDGHIA-PNATRFPDGID 80 (417)
T ss_dssp HHTTCCCHHHHHHHHHHHHH-------------------TTHHHHTCCEEECCSSCBCTTCCBTTBCC-BCTTTCTTHHH
T ss_pred hhCcCCCHHHHHHHHHHHHH-------------------cCchhhCCCEEEECCCccCCCCCCCCCEE-ECcccCCcCHH
Confidence 57888999988888886543 346788999999982 45555 44445566788
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCC-------CCCccHHHHHHHHHHcCCcEEE
Q 022336 208 SSIEQCKSVFGHDIAVFSNSAGLY-------EYDNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 208 e~L~~Lke~fGikVaIVSNnaGs~-------~~d~~~e~a~~~lk~LGI~vI~ 253 (299)
...+.+++. |.+++|-+.. |.. .... .+......++.||+++-
T Consensus 81 ~l~~~i~~~-Glk~Giw~~~-g~~~c~~~Pgs~~~-~~~d~~~~~~wGvdylK 130 (417)
T 1szn_A 81 GLAKKVHAL-GLKLGIYSTA-GTATCAGYPASLGY-EDVDAADFADWGVDYLK 130 (417)
T ss_dssp HHHHHHHHT-TCEEEEEEES-SSBCTTSCBCCTTC-HHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHc-CCEEEEEeCC-CCchhccCcchHhH-HHHHHHHHHHcCCCEEE
Confidence 889999997 9999988764 221 0011 12223445677988763
No 268
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=35.23 E-value=56 Score=25.21 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=36.0
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
.+.+.|++|+.++=. -+. .--.-+....+++++. |.++.++.-+ +.++.+.+..|+.
T Consensus 50 ~~~~~vvlDls~V~~-iDS-sGl~~L~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl~ 106 (125)
T 2ka5_A 50 KGYNKIFLVLSDVES-IDS-FSLGVIVNILKSISSS-GGFFALVSPN----------EKVERVLSLTNLD 106 (125)
T ss_dssp TTCCEEEEECTTCSC-CCH-HHHHHHHHHHHHHHHH-TCEEEEECCC----------HHHHHHHHHTTST
T ss_pred CCCCEEEEECCCCCE-EcH-HHHHHHHHHHHHHHHc-CCEEEEEeCC----------HHHHHHHHHcCCC
Confidence 367889999988754 111 1112224455667776 8888877543 4677788887764
No 269
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination-DNA binding COM; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=35.18 E-value=1.3e+02 Score=29.85 Aligned_cols=81 Identities=14% Similarity=0.187 Sum_probs=49.5
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCc--EEEE----cCC
Q 022336 210 IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQ--LIMV----DMC 283 (299)
Q Consensus 210 L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeE--iamV----GDr 283 (299)
++.+++.-|.+++|+|+... ..+.+...++..|+.+.+.....+...-.++++.|.-.... +++| |..
T Consensus 408 l~~~~~~~~~k~lIFs~~~~------~~~~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~v~L~st~a~g~ 481 (644)
T 1z3i_X 408 LAMTRTTTSDKVVLVSNYTQ------TLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGC 481 (644)
T ss_dssp HHHHHHHCCCEEEEEESCHH------HHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGGGSCT
T ss_pred HHHHhhcCCCEEEEEEccHH------HHHHHHHHHHHCCCCEEEEeCCCCHHHHHHHHHHhcCCCCCcEEEEEecccccC
Confidence 34444333789999999751 12344555556688776543344544456788888765543 4443 444
Q ss_pred cccccccceeeee
Q 022336 284 RIVIFPGPVVIFL 296 (299)
Q Consensus 284 l~DI~gAn~~~~~ 296 (299)
=.|+.+|+.||++
T Consensus 482 Glnl~~a~~Vi~~ 494 (644)
T 1z3i_X 482 GLNLIGANRLVMF 494 (644)
T ss_dssp TCCCTTEEEEEEC
T ss_pred CcccccCCEEEEE
Confidence 4568899999875
No 270
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=35.02 E-value=1.3e+02 Score=21.95 Aligned_cols=43 Identities=14% Similarity=0.008 Sum_probs=27.9
Q ss_pred HHHHcC-CcEEEEeccCeeecCCCcccCchHHHHHHHHHHh--CCCcEEEEeCCC
Q 022336 177 ELQRRG-FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV--FGHDIAVFSNSA 228 (299)
Q Consensus 177 ~Lk~~G-IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~--fGikVaIVSNna 228 (299)
.+.... +.+|++|.+- ++ ....+.++++++. ...+++++|...
T Consensus 46 ~~~~~~~~dlvi~D~~l----~~-----~~g~~~~~~l~~~~~~~~~ii~~s~~~ 91 (136)
T 3hdv_A 46 YLHYQKRIGLMITDLRM----QP-----ESGLDLIRTIRASERAALSIIVVSGDT 91 (136)
T ss_dssp HHHHCTTEEEEEECSCC----SS-----SCHHHHHHHHHTSTTTTCEEEEEESSC
T ss_pred HHHhCCCCcEEEEeccC----CC-----CCHHHHHHHHHhcCCCCCCEEEEeCCC
Confidence 344455 7889988762 11 2345677777764 246899999876
No 271
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=34.97 E-value=2.1e+02 Score=28.23 Aligned_cols=83 Identities=18% Similarity=0.123 Sum_probs=49.1
Q ss_pred HHHHHcCCcEEEE---eccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEE
Q 022336 176 AELQRRGFKGVVF---DKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (299)
Q Consensus 176 ~~Lk~~GIRaLVl---D~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI 252 (299)
..+.+.|...|++ |.|||...++ .+.++++++..+++ +|+|...+ +.+.+..+.+..|+..+
T Consensus 459 ~~~~~~Ga~~il~t~~~~dG~~~G~d--------~~li~~l~~~~~iP-VIasGGi~------s~~d~~~~~~~~G~~gv 523 (555)
T 1jvn_A 459 RACEALGAGEILLNCIDKDGSNSGYD--------LELIEHVKDAVKIP-VIASSGAG------VPEHFEEAFLKTRADAC 523 (555)
T ss_dssp HHHHHTTCCEEEECCGGGTTTCSCCC--------HHHHHHHHHHCSSC-EEECSCCC------SHHHHHHHHHHSCCSEE
T ss_pred HHHHHcCCCEEEEeCCCCCCCCCCCC--------HHHHHHHHHhCCcc-EEEECCCC------CHHHHHHHHHhcCChHH
Confidence 3556789999888 8888886221 55667776654555 45665543 25667777666777543
Q ss_pred E-----ccCCCCHHHHHHHHHHhCCC
Q 022336 253 R-----HRVKKPAGTAEEIEKHFGCQ 273 (299)
Q Consensus 253 ~-----ha~KKP~p~le~alk~lGi~ 273 (299)
. +..+-....+.+.++.-|+.
T Consensus 524 ivg~a~~~~~~~~~e~~~~l~~~gi~ 549 (555)
T 1jvn_A 524 LGAGMFHRGEFTVNDVKEYLLEHGLK 549 (555)
T ss_dssp EESHHHHTTSCCHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCCCHHHHHHHHHHCCCc
Confidence 2 22222223455566666663
No 272
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=34.96 E-value=1e+02 Score=27.07 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=29.1
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
.+.+++.|+.+|++|.+-.- +....+ ..+...+.+.|.+. |. +|++++...+
T Consensus 129 ~~~~~~~~iPvV~~~~~~~~--~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~~ 185 (333)
T 3jvd_A 129 VGSIAPEGIPMVQLTRGELG--PGFPRVLCDDEAGFFQLTESVLGG-SGMNIAALVGEES 185 (333)
T ss_dssp TTCCC-CCSCEEEECC------CCSCEEEECHHHHHHHHHHHHCCS-SSCEEEEEESCTT
T ss_pred HHHHhhCCCCEEEECccCCC--CCCCEEEEChHHHHHHHHHHHHHC-CCCeEEEEeCCCC
Confidence 45567789999999875321 111111 23445566666665 65 6888887653
No 273
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=34.95 E-value=2.8e+02 Score=26.05 Aligned_cols=96 Identities=7% Similarity=-0.003 Sum_probs=60.9
Q ss_pred CCHH-HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE
Q 022336 173 IDWA-ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 173 Id~~-~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v 251 (299)
++|+ ..++.|-.++.+|.+++=... .+.+.+..+-|..- ..++++--.. ...++.+++..++++
T Consensus 86 ~SFE~A~~~LGg~vi~l~~~~ss~~k-----gEsl~DTarvLs~~--~D~IviR~~~--------~~~~~~la~~s~vPV 150 (358)
T 4h31_A 86 CAFEVAAFDQGAQVTYIGPSGSQIGD-----KESMKDTARVLGRM--YDGIQYRGFG--------QAIVEELGAFAGVPV 150 (358)
T ss_dssp HHHHHHHHHTTCEEEEECSSSSCBTT-----TBCHHHHHHHHHHH--CSEEEEECSC--------HHHHHHHHHHSSSCE
T ss_pred HHHHHHHHHcCCeEEECCcccccccC-----ccchhHHHHHhhcc--CceeEecccc--------hhHHHHhhhhccCce
Confidence 4453 456789999988876654412 25667777766653 4566665443 677888888889998
Q ss_pred EEccCCCCHH--H---HHHHHHHhC---CCCCcEEEEcCC
Q 022336 252 IRHRVKKPAG--T---AEEIEKHFG---CQSSQLIMVDMC 283 (299)
Q Consensus 252 I~ha~KKP~p--~---le~alk~lG---i~PeEiamVGDr 283 (299)
+-.....-+| . +..+.+++| ++--.+++|||-
T Consensus 151 ING~g~~~HPtQaL~Dl~Ti~e~~~~~~l~gl~ia~vGD~ 190 (358)
T 4h31_A 151 WNGLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDA 190 (358)
T ss_dssp EESCCSSCCHHHHHHHHHHHHHTTTTCCGGGCEEEEESCT
T ss_pred ECCCCcCCCchHHHHHHHHHHHHhcCCCcCceEEEecCCC
Confidence 8632223334 3 345555665 334569999994
No 274
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=34.90 E-value=38 Score=27.53 Aligned_cols=43 Identities=12% Similarity=0.057 Sum_probs=32.1
Q ss_pred CCCcccCchH-HHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHH
Q 022336 197 PYSLTLWGPL-SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK 246 (299)
Q Consensus 197 p~~~~l~Pgv-~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~ 246 (299)
-++..+.++. .+.++.+++. |+++.|.||.. + ..+.++.+.+.
T Consensus 11 GGEPll~~~~~~~l~~~~~~~-g~~~~l~TNG~-l-----~~~~~~~l~~~ 54 (182)
T 3can_A 11 GGEPLLHPEFLIDILKRCGQQ-GIHRAVDTTLL-A-----RKETVDEVMRN 54 (182)
T ss_dssp SSTGGGSHHHHHHHHHHHHHT-TCCEEEECTTC-C-----CHHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHHHHC-CCcEEEECCCC-C-----CHHHHHHHHhh
Confidence 4777788887 5999999986 99999999975 1 14556666554
No 275
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=34.74 E-value=1.6e+02 Score=22.84 Aligned_cols=79 Identities=11% Similarity=0.072 Sum_probs=48.4
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc---EEEccCCCCHHHHH-HHHHHhCCCCCcEE
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIRHRVKKPAGTAE-EIEKHFGCQSSQLI 278 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~---vI~ha~KKP~p~le-~alk~lGi~PeEia 278 (299)
.+++.+.++++-+. .+|+|+|-+.....+=+.-.+++.+++.+|++ +.......- +.+. .+.+..|...==.+
T Consensus 2 ~~~~~~~v~~~i~~--~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~-~~~~~~l~~~sg~~tvP~v 78 (121)
T 3gx8_A 2 STEIRKAIEDAIES--APVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLED-PELREGIKEFSEWPTIPQL 78 (121)
T ss_dssp CHHHHHHHHHHHHS--CSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTC-HHHHHHHHHHHTCCSSCEE
T ss_pred CHHHHHHHHHHhcc--CCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCC-HHHHHHHHHHhCCCCCCeE
Confidence 46777888888774 68999987510000112357899999999997 533322222 3333 34445576666678
Q ss_pred EEcCCc
Q 022336 279 MVDMCR 284 (299)
Q Consensus 279 mVGDrl 284 (299)
+||+..
T Consensus 79 fI~g~~ 84 (121)
T 3gx8_A 79 YVNKEF 84 (121)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 998864
No 276
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=34.63 E-value=2.1e+02 Score=26.72 Aligned_cols=91 Identities=16% Similarity=0.135 Sum_probs=54.9
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCC
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVK 257 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~K 257 (299)
.++.|-.++.||-.++=. .-.+.+.+..+-+.. + ..++++--.. ...++.+++..++|+|--...
T Consensus 70 ~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvLs~-~-~D~iviR~~~--------~~~~~~lA~~~~vPVINag~~ 134 (323)
T 3gd5_A 70 MYQLGGQVIDLSPSNTQV-----GRGEPVRDTARVLGR-Y-VDGLAIRTFA--------QTELEEYAHYAGIPVINALTD 134 (323)
T ss_dssp HHHTTCEEEEC---------------CCHHHHHHHHTT-T-CSEEEEECSS--------HHHHHHHHHHHCSCEEEEECS
T ss_pred HHHcCCeEEEeCcccccC-----CCCCCHHHHHHHHHH-h-CCEEEEecCC--------hhHHHHHHHhCCCCEEeCCCC
Confidence 356788888887543322 123556666666544 2 4566665543 567888888889998854333
Q ss_pred CCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 258 KPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 258 KP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
.-+| . +..+.+++| ++--.+++|||-
T Consensus 135 ~~HPtQaLaDl~Ti~e~~g~l~glkva~vGD~ 166 (323)
T 3gd5_A 135 HEHPCQVVADLLTIRENFGRLAGLKLAYVGDG 166 (323)
T ss_dssp SCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCcHHHHHHHHHHHHHhCCCCCCEEEEECCC
Confidence 3334 2 556777887 577789999995
No 277
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=34.54 E-value=1e+02 Score=28.13 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=38.3
Q ss_pred CCcEEEEe--CCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHH-HHHHHHHHhCCCCCcEEEEcC
Q 022336 218 GHDIAVFS--NSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDM 282 (299)
Q Consensus 218 GikVaIVS--NnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p-~le~alk~lGi~PeEiamVGD 282 (299)
|..|+++| +-+++ +++....++.+ ..-|+++... |.+ .+..++...|++.+...++|-
T Consensus 88 G~~Va~lsdaGdP~i--~~~g~~lv~~~-~~~gi~v~vi----PGiSA~~aA~a~~Glp~~~f~f~g~ 148 (296)
T 3kwp_A 88 GMQIAQVSDAGMPSI--SDPGHELVNAC-IDAHIPVVPL----PGANAGLTALIASGLAPQPFYFYGF 148 (296)
T ss_dssp TCEEEEECSSBCTTS--SHHHHHHHHHH-HHTTCCEEEC----CCCCHHHHHHHHHSSCCSSEEEEEE
T ss_pred CceEEEeccCCCCCC--CCCchHHHHHH-HHcCCCeeeC----CCcccchHHHHhccCCCCceeEEee
Confidence 88999997 55543 34444444444 3347765432 332 467888999999999999973
No 278
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=34.43 E-value=2.7e+02 Score=25.72 Aligned_cols=92 Identities=8% Similarity=0.031 Sum_probs=58.7
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-+.+=. .-.+.+.+..+-+..- ..++++--.. ...++.+++..++|++--..
T Consensus 57 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvls~~--~D~iviR~~~--------~~~~~~lA~~~~vPVINag~ 121 (307)
T 3tpf_A 57 AITELGGKALFLSSNDLQL-----SRGEPVKDTARVIGAM--VDFVMMRVNK--------HETLLEFARYSKAPVINALS 121 (307)
T ss_dssp HHHHTTCEEEEECTTTCCT-----TTSSCHHHHHHHHHHH--SSEEEEECSC--------HHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHcCCeEEEcCcccccC-----CCCCCHHHHHHHHHHh--CCEEEEecCC--------hHHHHHHHHhCCCCEEeCCC
Confidence 3456788888887653222 2235666777666653 4566665443 57788888888999885433
Q ss_pred CCCHH--H---HHHHHHHhC-CC-CCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQ-SSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~-PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++ --.+++|||.
T Consensus 122 ~~~HPtQaLaDl~Ti~e~~g~l~~gl~va~vGD~ 155 (307)
T 3tpf_A 122 ELYHPTQVLGDLFTIKEWNKMQNGIAKVAFIGDS 155 (307)
T ss_dssp SSCCHHHHHHHHHHHHHTTCCGGGCCEEEEESCS
T ss_pred CCcCcHHHHHHHHHHHHHhCCCCCCCEEEEEcCC
Confidence 33334 2 456677777 44 4579999994
No 279
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=34.37 E-value=1.5e+02 Score=22.31 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=42.7
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH---h--CCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS---V--FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke---~--fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
+.++...+.+|++|.+- |+ ....+.++++++ . ...+++++|... ...........|+.
T Consensus 52 ~~~~~~~~dlvl~D~~m----p~-----~~g~~~~~~lr~~~~~~~~~~pii~~s~~~--------~~~~~~~~~~~Ga~ 114 (143)
T 3m6m_D 52 DAMAEEDYDAVIVDLHM----PG-----MNGLDMLKQLRVMQASGMRYTPVVVLSADV--------TPEAIRACEQAGAR 114 (143)
T ss_dssp HHHHHSCCSEEEEESCC----SS-----SCHHHHHHHHHHHHHTTCCCCCEEEEESCC--------CHHHHHHHHHTTCS
T ss_pred HHHhcCCCCEEEEeCCC----CC-----CCHHHHHHHHHhchhccCCCCeEEEEeCCC--------CHHHHHHHHHcChh
Confidence 44566789999999862 22 223455555542 1 125799999876 23333334456775
Q ss_pred EEEccCCCCHH--HHHHHHHHhC
Q 022336 251 VIRHRVKKPAG--TAEEIEKHFG 271 (299)
Q Consensus 251 vI~ha~KKP~p--~le~alk~lG 271 (299)
.+. .||.. .+..+++.+.
T Consensus 115 ~~l---~KP~~~~~L~~~l~~~~ 134 (143)
T 3m6m_D 115 AFL---AKPVVAAKLLDTLADLA 134 (143)
T ss_dssp EEE---ESSCCHHHHHHHHHHHC
T ss_pred hee---eCCCCHHHHHHHHHHHH
Confidence 443 35652 3666666553
No 280
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=33.77 E-value=45 Score=33.04 Aligned_cols=68 Identities=13% Similarity=0.135 Sum_probs=37.3
Q ss_pred HHHHcCCcEEEE-e----ccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE
Q 022336 177 ELQRRGFKGVVF-D----KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 177 ~Lk~~GIRaLVl-D----~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v 251 (299)
.|++.|++++++ | +||-+...+.......-.+-|+.+-++ .+-|+-... .....++.+++++|+++
T Consensus 243 lL~~~Gi~v~~lpd~s~~ld~p~~~~~~~~~ggtt~~ei~~~~~A---~~niv~~~~------~~~~~A~~Le~~~GiP~ 313 (523)
T 3u7q_B 243 MLSEMGVGYSLLSDPEEVLDTPADGQFRMYAGGTTQEEMKDAPNA---LNTVLLQPW------HLEKTKKFVEGTWKHEV 313 (523)
T ss_dssp HHHHTTCCEEESSCCTTTTSCCCSSCCCSCCCCBCHHHHHHGGGS---SEEEESSGG------GCHHHHHHHHHTSCCCC
T ss_pred HHHHcCCeEEEecCchhcccccccccccccCCCCCHHHHHHhhcC---cEEEEEccc------hHHHHHHHHHHHhCCCe
Confidence 456799998875 4 566655333322222234445554443 444443221 01467788888889887
Q ss_pred EE
Q 022336 252 IR 253 (299)
Q Consensus 252 I~ 253 (299)
+.
T Consensus 314 i~ 315 (523)
T 3u7q_B 314 PK 315 (523)
T ss_dssp CC
T ss_pred ee
Confidence 64
No 281
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=33.62 E-value=1.3e+02 Score=21.64 Aligned_cols=44 Identities=7% Similarity=0.046 Sum_probs=30.8
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- |+ ....+.++++++..+.+++++|...
T Consensus 40 ~~~~~~~~dlii~D~~~----p~-----~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 40 EMVEELQPDLILLDIML----PN-----KDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHTTCCSEEEEETTS----TT-----THHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHhhCCCCEEEEeCCC----CC-----CCHHHHHHHHHhcCCCCEEEEECCC
Confidence 34556788899999752 22 2346777777766577899999876
No 282
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=33.55 E-value=3e+02 Score=26.11 Aligned_cols=100 Identities=13% Similarity=0.092 Sum_probs=62.7
Q ss_pred HHHHcCCcEEEEecc----------CeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCC--CCccHHHHHHHH
Q 022336 177 ELQRRGFKGVVFDKD----------NTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDNDASKARKLE 244 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~D----------NTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~--~d~~~e~a~~~l 244 (299)
..++.|-.++.|+-. ||+. .+ .-.+.+.+..+-+..- ..++++--.++..+ .|.....++.++
T Consensus 79 A~~~LGg~~i~l~~~~~ss~~~s~~~~vm-~~--~kgEsl~DTarvLs~y--~D~IviR~~~~~~~~~~~~~~~~~~~lA 153 (359)
T 1zq6_A 79 GAFQLGGHAVVLQPGKDAWPIEFNLGTVM-DG--DTEEHIAEVARVLGRY--VDLIGVRAFPKFVDWSKDREDQVLKSFA 153 (359)
T ss_dssp HHHHTTCEEEEECHHHHSCCEECSSSCCC-CS--SCCEEHHHHHHHHHHH--CSEEEEECCCCSSCHHHHTTCHHHHHHH
T ss_pred HHHHcCCeEEEeCCCcccccccccccccc-cC--CCCCcHHHHHHHHHHh--CcEEEEeccccccccccccchHHHHHHH
Confidence 345679999999877 2222 00 2246677777776663 56666655532211 011246788888
Q ss_pred HHcCCcEEEccCCCCHHH-----HHHHHHHhC---CCCCc--EEEEcC
Q 022336 245 GKIGIKVIRHRVKKPAGT-----AEEIEKHFG---CQSSQ--LIMVDM 282 (299)
Q Consensus 245 k~LGI~vI~ha~KKP~p~-----le~alk~lG---i~PeE--iamVGD 282 (299)
+..++|+|--.... +|. +..+.+++| ++--. +++|||
T Consensus 154 ~~~~vPVINag~g~-HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGD 200 (359)
T 1zq6_A 154 KYSPVPVINMETIT-HPCQELAHALALQEHFGTPDLRGKKYVLTWTYH 200 (359)
T ss_dssp HHCSSCEEESSSSC-CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCC
T ss_pred HhCCCCEEeCCCCC-CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEec
Confidence 88899998754444 663 556778888 45567 889999
No 283
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=33.47 E-value=2.9e+02 Score=25.46 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=60.8
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-..+=. .-.+.+.+..+-+..- ..++++-... ...++.+++..+++++--..
T Consensus 60 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvls~~--~D~iviR~~~--------~~~~~~lA~~~~vPVINa~~ 124 (307)
T 2i6u_A 60 GIAQLGGHAVVVDSGSTQL-----GRDETLQDTAKVLSRY--VDAIVWRTFG--------QERLDAMASVATVPVINALS 124 (307)
T ss_dssp HHHHTTCEEEEEEGGGSGG-----GGTCCHHHHHHHHHHH--EEEEEEECSS--------HHHHHHHHHHCSSCEEESCC
T ss_pred HHHHcCCeEEEECCccccC-----CCCCCHHHHHHHHHHh--CCEEEEecCC--------hhHHHHHHhhCCCCEEcCCC
Confidence 3456788888888654322 2235566666666553 3556655443 67888888888999986544
Q ss_pred CCCHHH-----HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAGT-----AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p~-----le~alk~lG-i~PeEiamVGDr 283 (299)
..-+|. +..+.+++| ++--.+++|||.
T Consensus 125 ~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 157 (307)
T 2i6u_A 125 DEFHPCQVLADLQTIAERKGALRGLRLSYFGDG 157 (307)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT
T ss_pred CCcCccHHHHHHHHHHHHhCCcCCeEEEEECCC
Confidence 344452 557777887 455679999995
No 284
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=33.30 E-value=79 Score=22.91 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=24.6
Q ss_pred cEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 184 RaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
+.|++|+.++-. -+ ..--.-+.+..+++++. |.++.++.=+ +.+..+.+..|+
T Consensus 45 ~~vvlDls~v~~-iD-ssgl~~L~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl 97 (110)
T 1sbo_A 45 KKIVLDLSSVSY-MD-SAGLGTLVVILKDAKIN-GKEFILSSLK----------ESISRILKLTHL 97 (110)
T ss_dssp SEEEEECTTCCC-BC-HHHHHHHHHHHHHHHHT-TCEEEEESCC----------HHHHHHHHHTTC
T ss_pred cEEEEECCCCcE-Ec-cHHHHHHHHHHHHHHHc-CCEEEEEeCC----------HHHHHHHHHhCc
Confidence 667777766533 01 01111122334445554 6666554322 345555565554
No 285
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=33.28 E-value=1.4e+02 Score=23.34 Aligned_cols=42 Identities=10% Similarity=0.105 Sum_probs=28.6
Q ss_pred CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 218 GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 218 GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
+.+++||-|+..+.......+.+..+.+.++++++.-+.+..
T Consensus 114 ~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 155 (199)
T 2gf0_A 114 DIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMN 155 (199)
T ss_dssp GSCEEEEEECTTCSSCSSCHHHHHHHHHHHTCEEEECBTTTT
T ss_pred CCCEEEEEECccCCccccCHHHHHHHHHHhCCeEEEEecCCC
Confidence 578999999986543233456677788888887776554443
No 286
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=33.22 E-value=81 Score=25.95 Aligned_cols=79 Identities=25% Similarity=0.247 Sum_probs=45.2
Q ss_pred cCCccccC-CcCC--CCHHHHHHcCCcEEEEeccCeeecCCCc-ccCchHHHHHHHHHHhCCCcEE-EEeCCCCCCCCCc
Q 022336 161 ALPHVTVP-DIRY--IDWAELQRRGFKGVVFDKDNTLTAPYSL-TLWGPLSSSIEQCKSVFGHDIA-VFSNSAGLYEYDN 235 (299)
Q Consensus 161 l~P~~~v~-sI~~--Id~~~Lk~~GIRaLVlD~DNTLT~p~~~-~l~Pgv~e~L~~Lke~fGikVa-IVSNnaGs~~~d~ 235 (299)
-.|++.++ +... ++++.+. +|-++|++..=++-+ +.-. .--|...+..+++++. |+.++ ++|-..
T Consensus 20 ~aPdf~l~~~~~g~~v~L~d~~-~gk~vvL~f~pa~wc-p~C~~~e~p~l~~~~~~~~~~-gv~vv~~iS~D~------- 89 (173)
T 3mng_A 20 AIPAVEVFEGEPGNKVNLAELF-KGKKGVLFGVPGAFT-PGCSKTHLPGFVEQAEALKAK-GVQVVACLSVND------- 89 (173)
T ss_dssp BCCCCEEECSSTTCEEEHHHHT-TTSEEEEEECSCTTC-HHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC-------
T ss_pred CCCCeEeeeCCCCCEEEhHHHh-CCCcEEEEEEeCCCC-CCCCHHHHHHHHHHHHHHHhC-CCEEEEEEcCCC-------
Confidence 35777666 4432 4444431 354566666544444 2211 1124555556677776 88876 477654
Q ss_pred cHHHHHHHHHHcCCc
Q 022336 236 DASKARKLEGKIGIK 250 (299)
Q Consensus 236 ~~e~a~~~lk~LGI~ 250 (299)
....+.+.++.+++
T Consensus 90 -~~~~~~f~~~~~~~ 103 (173)
T 3mng_A 90 -AFVTGEWGRAHKAE 103 (173)
T ss_dssp -HHHHHHHHHHTTCT
T ss_pred -HHHHHHHHHHhCCC
Confidence 56778888888765
No 287
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=33.13 E-value=1.4e+02 Score=21.76 Aligned_cols=44 Identities=14% Similarity=-0.127 Sum_probs=29.4
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH--h-CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS--V-FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke--~-fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++ . .+.+++++|+..
T Consensus 48 ~~l~~~~~dlii~d~~l----~~-----~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 94 (143)
T 3cnb_A 48 DLLHTVKPDVVMLDLMM----VG-----MDGFSICHRIKSTPATANIIVIAMTGAL 94 (143)
T ss_dssp HHHHHTCCSEEEEETTC----TT-----SCHHHHHHHHHTSTTTTTSEEEEEESSC
T ss_pred HHHHhcCCCEEEEeccc----CC-----CcHHHHHHHHHhCccccCCcEEEEeCCC
Confidence 45566788999999753 11 234566777766 2 246899999876
No 288
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=32.84 E-value=14 Score=29.93 Aligned_cols=97 Identities=13% Similarity=0.174 Sum_probs=56.0
Q ss_pred cCCccccCCcC--CCCHHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHH
Q 022336 161 ALPHVTVPDIR--YIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS 238 (299)
Q Consensus 161 l~P~~~v~sI~--~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e 238 (299)
-.|++..++.. .+++..+..+|-.+|++-.=++-+ +.-..-.+...+..+++++. |+.++.||-.. .+
T Consensus 10 ~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~c-p~C~~e~~~l~~~~~~~~~~-~v~vv~is~d~--------~~ 79 (164)
T 4gqc_A 10 KAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFS-PVCTKELCTFRDKMAQLEKA-NAEVLAISVDS--------PW 79 (164)
T ss_dssp BCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTC-CEECSSCEESCCCGGGGGGS-SSEEEEEESSC--------HH
T ss_pred CCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCC-CCcccchhhhhhhHHHhhcc-CceEEEecCCC--------HH
Confidence 35777776654 366677766786666655423333 22222234444455566665 89888888654 56
Q ss_pred HHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCC
Q 022336 239 KARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGC 272 (299)
Q Consensus 239 ~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi 272 (299)
..+.+.++.++++-.-. .|.. ++.+.+|+
T Consensus 80 ~~~~~~~~~~~~fp~l~--D~~~---~v~~~ygv 108 (164)
T 4gqc_A 80 CLKKFKDENRLAFNLLS--DYNR---EVIKLYNV 108 (164)
T ss_dssp HHHHHHHHTTCCSEEEE--CTTS---HHHHHTTC
T ss_pred HHHHHHHhcCcccceee--cCch---HHHHHcCC
Confidence 77788888887532211 1221 46677886
No 289
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.63 E-value=1.5e+02 Score=21.79 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=29.5
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH--h-CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS--V-FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke--~-fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++ . .+.+++++|...
T Consensus 44 ~~l~~~~~dlvi~d~~l----~~-----~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 44 EQVARRPYAAMTVDLNL----PD-----QDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHSCCSEEEECSCC----SS-----SCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHhCCCCEEEEeCCC----CC-----CCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 45667889999999762 11 234566777765 2 256899999875
No 290
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=32.50 E-value=13 Score=31.95 Aligned_cols=20 Identities=5% Similarity=-0.104 Sum_probs=18.0
Q ss_pred HHHHHHHHhCCCCCcEEEEcCCccc
Q 022336 262 TAEEIEKHFGCQSSQLIMVDMCRIV 286 (299)
Q Consensus 262 ~le~alk~lGi~PeEiamVGDrl~D 286 (299)
+++.+++++| +++|||+.+|
T Consensus 164 al~~l~~~~g-----via~GD~~ND 183 (239)
T 1u02_A 164 AIRSVRGERP-----AIIAGDDATD 183 (239)
T ss_dssp HHHHHHTTSC-----EEEEESSHHH
T ss_pred HHHHHHhhCC-----eEEEeCCCcc
Confidence 5888888888 9999999999
No 291
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=32.49 E-value=59 Score=26.15 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=55.8
Q ss_pred CCccccCCcC------CCCHHHHHHcCCcEEEEecc-CeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCC
Q 022336 162 LPHVTVPDIR------YIDWAELQRRGFKGVVFDKD-NTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD 234 (299)
Q Consensus 162 ~P~~~v~sI~------~Id~~~Lk~~GIRaLVlD~D-NTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d 234 (299)
.|++.+.+.. .+++..+ +| |.+|+++= +|-+ +......+.+.+..+++++. |+.++.||-..
T Consensus 7 ~P~f~l~~~~g~~~~~~~~l~~~--~g-k~vvl~F~~a~~C-~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~------ 75 (187)
T 1we0_A 7 VQPFRAQAFQSGKDFFEVTEADL--KG-KWSIVVFYPADFS-FVCPTELEDVQKEYAELKKL-GVEVYSVSTDT------ 75 (187)
T ss_dssp CCCCEEEEECSSSCCEEEETTTT--SS-SEEEEEECSCTTC-SSCTHHHHHHHHHHHHHHHT-TEEEEEEESSC------
T ss_pred CCCeEEeccCCCccceEecHHHH--CC-CCEEEEEECCCCC-cchHHHHHHHHHHHHHHHHc-CCEEEEEECCC------
Confidence 5666666553 3445544 45 78888886 6666 44444455666666667665 78888887654
Q ss_pred ccHHHHHHHHHHc----CCc--EEEccCCCCHHHHHHHHHHhCCC
Q 022336 235 NDASKARKLEGKI----GIK--VIRHRVKKPAGTAEEIEKHFGCQ 273 (299)
Q Consensus 235 ~~~e~a~~~lk~L----GI~--vI~ha~KKP~p~le~alk~lGi~ 273 (299)
.+.++.+.+.+ ++. ++.. +. .++.+.+|+.
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~d----~~---~~~~~~~~v~ 111 (187)
T 1we0_A 76 --HFVHKAWHENSPAVGSIEYIMIGD----PS---QTISRQFDVL 111 (187)
T ss_dssp --HHHHHHHHHSCHHHHTCCSEEEEC----TT---CHHHHHTTCE
T ss_pred --HHHHHHHHHHhccccCCCceEEEC----Cc---hHHHHHhCCC
Confidence 45666677666 553 3322 11 2456778875
No 292
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=32.47 E-value=1.5e+02 Score=22.35 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=44.2
Q ss_pred HHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEc
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~h 254 (299)
+....=.+++|.++- .-...+.+++.++.+. .+.+++||-|+..+.. .....+.++.+.+.++++++.-
T Consensus 71 ~~~~~~i~v~d~~~~-------~s~~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (166)
T 3q72_A 71 AMGDAYVIVYSVTDK-------GSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIET 143 (166)
T ss_dssp --CCEEEEEEETTCH-------HHHHHHHHHHHHHHHCC---CCCEEEEEECTTCCSSCCSCHHHHHHHHHHTTCEEEEC
T ss_pred hhCCEEEEEEECCCH-------HHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccccccccCHHHHHHHHHHhCCcEEEe
Confidence 334445677777642 1224556666666542 2678999999985532 2234566778888889887766
Q ss_pred cCCC
Q 022336 255 RVKK 258 (299)
Q Consensus 255 a~KK 258 (299)
+.+.
T Consensus 144 Sa~~ 147 (166)
T 3q72_A 144 SAAL 147 (166)
T ss_dssp BGGG
T ss_pred ccCC
Confidence 5443
No 293
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=32.32 E-value=14 Score=34.43 Aligned_cols=12 Identities=50% Similarity=0.456 Sum_probs=11.3
Q ss_pred cEEEEeccCeee
Q 022336 184 KGVVFDKDNTLT 195 (299)
Q Consensus 184 RaLVlD~DNTLT 195 (299)
|..|||.||||+
T Consensus 26 riAVFD~DgTLi 37 (327)
T 4as2_A 26 AYAVFDMDNTSY 37 (327)
T ss_dssp CEEEECCBTTTE
T ss_pred CEEEEeCCCCee
Confidence 789999999998
No 294
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=32.30 E-value=1.6e+02 Score=22.14 Aligned_cols=41 Identities=7% Similarity=-0.133 Sum_probs=26.7
Q ss_pred HHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+...+.+|++|.+- ++ ....+.++.+++.. +.+++++|+..
T Consensus 44 ~~~~~dliild~~l----~~-----~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 44 SADFAGIVISDIRM----PG-----MDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp CTTCCSEEEEESCC----SS-----SCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HhCCCCEEEEeCCC----CC-----CCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 34568899999762 11 23456666666542 46899999875
No 295
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=32.23 E-value=3e+02 Score=25.30 Aligned_cols=92 Identities=11% Similarity=0.079 Sum_probs=59.8
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-..+=. + =.+.+.+..+-+.. + ..++++-... ...++.+++..+++++--..
T Consensus 66 A~~~LGg~~i~l~~~~ss~--~---kgEsl~DTarvls~-~-~D~iviR~~~--------~~~~~~la~~~~vPVINa~~ 130 (301)
T 2ef0_A 66 AMVHLGGHAVYLDQKQVGI--G---EREPVRDVAKNLER-F-VEGIAARVFR--------HETVEALARHAKVPVVNALS 130 (301)
T ss_dssp HHHHTTCEEEEEEGGGSCT--T---TCCCHHHHHHHHTT-T-CSEEEEECSS--------HHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHcCCeEEEECCccccc--C---CCCchHHHHHHHHH-h-CCEEEEecCC--------hHHHHHHHHHCCCCEEeCCC
Confidence 3456788888888654322 1 23566666666654 3 3566665543 67788888888999886433
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||.
T Consensus 131 ~~~HPtQaLaDl~Ti~e~~g~l~gl~ia~vGD~ 163 (301)
T 2ef0_A 131 DRAHPLQALADLLTLKEVFGGLAGLEVAWVGDG 163 (301)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CccCchHHHHHHHHHHHHhCCcCCcEEEEECCC
Confidence 33344 2 557777887 466779999994
No 296
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=32.23 E-value=22 Score=36.09 Aligned_cols=39 Identities=26% Similarity=0.265 Sum_probs=24.0
Q ss_pred HcCCcEEEEeccCeeecCCCcccCch-HHH-HHHHHHHhCCCc
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGP-LSS-SIEQCKSVFGHD 220 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pg-v~e-~L~~Lke~fGik 220 (299)
-..|++|.||.|.||+ .|.....+. +.+ ..+.|.+. |++
T Consensus 62 L~~I~~iGFDmDyTLa-~Y~~~~~e~L~y~~~~~~LV~~-gYP 102 (555)
T 2jc9_A 62 MEKIKCFGFDMDYTLA-VYKSPEYESLGFELTVERLVSI-GYP 102 (555)
T ss_dssp GGGCCEEEECTBTTTB-CBCTTHHHHHHHHHHHHHHHHT-TCC
T ss_pred ccCCCEEEECCccccc-ccCcHHHHHHHHHHHHHHHHHc-CCC
Confidence 3589999999999999 554433332 122 23345543 665
No 297
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=32.14 E-value=1.9e+02 Score=22.84 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=46.0
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh--CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcE
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV--FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~--fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~v 251 (299)
...++....=.+|+|.++. .-...+..|+..+.+. .+.+++||-|+..+.. .....+.++.+.+.+|+++
T Consensus 88 ~~~~~~~d~ii~v~d~~~~-------~s~~~~~~~l~~i~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~ 160 (191)
T 2a5j_A 88 RSYYRGAAGALLVYDITRR-------ETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIF 160 (191)
T ss_dssp HHHHTTCSEEEEEEETTCH-------HHHHTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEE
T ss_pred HHHhccCCEEEEEEECCCH-------HHHHHHHHHHHHHHHhcCCCCCEEEEEECcccCCccccCHHHHHHHHHHcCCEE
Confidence 3444444444566666542 1123456677776653 1578999999985431 1123456778888889877
Q ss_pred EEccCCCC
Q 022336 252 IRHRVKKP 259 (299)
Q Consensus 252 I~ha~KKP 259 (299)
+.-+.+..
T Consensus 161 ~~~Sa~~~ 168 (191)
T 2a5j_A 161 METSAKTA 168 (191)
T ss_dssp EEECTTTC
T ss_pred EEEeCCCC
Confidence 76554443
No 298
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=32.03 E-value=3e+02 Score=25.47 Aligned_cols=92 Identities=9% Similarity=0.036 Sum_probs=60.2
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.|+-+.+=. .-.+.+.+..+-+.. + ..++++-... ...++.+++..++|++--..
T Consensus 67 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvls~-~-~D~iviR~~~--------~~~~~~lA~~~~vPVINa~~ 131 (315)
T 1pvv_A 67 AMAHLGGHALYLNAQDLQL-----RRGETIADTARVLSR-Y-VDAIMARVYD--------HKDVEDLAKYATVPVINGLS 131 (315)
T ss_dssp HHHHTTSEEEEEEGGGSTT-----TTTCCHHHHHHHHTT-T-CSEEEEECSS--------HHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHcCCeEEEECCccccC-----CCCcCHHHHHHHHHH-h-CcEEEEecCc--------hHHHHHHHHhCCCCEEcCCC
Confidence 4456788999998653322 223566677766655 3 3566665543 67888888888999885433
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||.
T Consensus 132 ~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 164 (315)
T 1pvv_A 132 DFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG 164 (315)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC
T ss_pred CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC
Confidence 33344 2 567777887 455679999994
No 299
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=31.77 E-value=1.6e+02 Score=23.42 Aligned_cols=74 Identities=9% Similarity=0.003 Sum_probs=43.0
Q ss_pred HHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH---hCCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEc
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS---VFGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke---~fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~h 254 (299)
+....=.+|+|.++-- -.+.+.+|+..+.+ ..+.+++||-|+..+... ....+.+..+.+.++++++.-
T Consensus 97 ~~~d~iilv~D~~~~~-------s~~~~~~~~~~i~~~~~~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~ 169 (196)
T 2atv_A 97 RWGEGFVLVYDITDRG-------SFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYEC 169 (196)
T ss_dssp HHCSEEEEEEETTCHH-------HHHTHHHHHHHHHHHHTTSCCCEEEEEECGGGGGGCCSCHHHHHHHHHHHTSEEEEC
T ss_pred ccCCEEEEEEECcCHH-------HHHHHHHHHHHHHHhhCCCCCcEEEEEECcccccccccCHHHHHHHHHHhCCeEEEE
Confidence 3334446777765421 12345555555543 126789999999854321 123456777888889887766
Q ss_pred cCCCC
Q 022336 255 RVKKP 259 (299)
Q Consensus 255 a~KKP 259 (299)
+.+..
T Consensus 170 Sa~~g 174 (196)
T 2atv_A 170 SACTG 174 (196)
T ss_dssp CTTTC
T ss_pred CCCcC
Confidence 55444
No 300
>3mwy_W Chromo domain-containing protein 1; SWI2/SNF2 ATPase, double chromodomains, hydrolase; HET: ATG; 3.70A {Saccharomyces cerevisiae}
Probab=31.76 E-value=95 Score=31.76 Aligned_cols=82 Identities=17% Similarity=0.227 Sum_probs=50.2
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCc--EEEE----c
Q 022336 208 SSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQ--LIMV----D 281 (299)
Q Consensus 208 e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeE--iamV----G 281 (299)
+.|.++++. |.+++|+|.... ....+...+...|+.+.+....-+...-.++++.|.-.... +++| |
T Consensus 563 ~lL~~~~~~-g~kvLIFsq~~~------~ld~L~~~L~~~g~~~~~i~G~~~~~eR~~~i~~F~~~~~~~~v~LlSt~ag 635 (800)
T 3mwy_W 563 QLLTRLKKD-GHRVLIFSQMVR------MLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAG 635 (800)
T ss_dssp HHHHHHTTT-TCCEEEEESCHH------HHHHHHHHHHHHTCCCEEESTTSCHHHHHHHHHTTSSTTCSCCCEEEEHHHH
T ss_pred HHHHHHhhC-CCeEEEEechHH------HHHHHHHHHHhCCCCEEEEeCCCCHHHHHHHHHHhhCCCCCceEEEEecccc
Confidence 444555555 889999998751 12333444444577765433334444456788989865444 3442 5
Q ss_pred CCcccccccceeeee
Q 022336 282 MCRIVIFPGPVVIFL 296 (299)
Q Consensus 282 Drl~DI~gAn~~~~~ 296 (299)
..=.|+-+|+.||++
T Consensus 636 g~GlNL~~a~~VI~~ 650 (800)
T 3mwy_W 636 GLGINLMTADTVVIF 650 (800)
T ss_dssp TTTCCCTTCCEEEES
T ss_pred cCCCCccccceEEEe
Confidence 555678889999875
No 301
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=31.74 E-value=62 Score=26.95 Aligned_cols=52 Identities=15% Similarity=0.173 Sum_probs=33.3
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
.+.+++.|+.+|++|.+-. .+.-..+ ..+...+.+.|.+. |. +|++++...+
T Consensus 75 ~~~~~~~~iPvV~~~~~~~--~~~~~~V~~d~~~~~~~a~~~L~~~-G~~~i~~i~~~~~ 131 (272)
T 3o74_A 75 YRELQDKGLPVIAIDRRLD--PAHFCSVISDDRDASRQLAASLLSS-APRSIALIGARPE 131 (272)
T ss_dssp HHHHHHTTCCEEEESSCCC--TTTCEEEEECHHHHHHHHHHHHHTT-CCSEEEEEEECTT
T ss_pred HHHHHHcCCCEEEEccCCC--ccccCEEEEchHHHHHHHHHHHHHC-CCcEEEEEecCCC
Confidence 4678889999999986532 1111111 23455666777776 75 6999987653
No 302
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=31.69 E-value=29 Score=29.31 Aligned_cols=112 Identities=14% Similarity=0.066 Sum_probs=70.7
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCC-----ccHHHHHHHHHHcCCc
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-----NDASKARKLEGKIGIK 250 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d-----~~~e~a~~~lk~LGI~ 250 (299)
+.+++.|+....-+.|..+.......+++++.+.++.+ +. |+++ |+||........ ........+....+..
T Consensus 112 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~-~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 188 (271)
T 1vjr_A 112 KVFEAYGHVIDEENPDFVVLGFDKTLTYERLKKACILL-RK-GKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRK 188 (271)
T ss_dssp HHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHH-TT-TCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCC
T ss_pred HHHHHcCCccCCCCCCEEEEeCCCCcCHHHHHHHHHHH-HC-CCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCC
Confidence 45556666543333333444334445678888999888 55 8888 999975221100 0111233344444555
Q ss_pred E-EEccCCCCHH-HHHHHHHHhCCCCCcEEEEcCCc-ccccccce
Q 022336 251 V-IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 251 v-I~ha~KKP~p-~le~alk~lGi~PeEiamVGDrl-~DI~gAn~ 292 (299)
. +.. .||.+ .++.+++++|++|+|++||||++ +||.+|+.
T Consensus 189 ~~~~~--~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~ 231 (271)
T 1vjr_A 189 PDLIA--GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKN 231 (271)
T ss_dssp CSEEC--STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHH
T ss_pred CcccC--CCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHH
Confidence 4 443 36665 48999999999999999999995 99877664
No 303
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=31.60 E-value=1.1e+02 Score=22.72 Aligned_cols=42 Identities=10% Similarity=-0.046 Sum_probs=26.4
Q ss_pred HcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
...+.+|++|.+- ++. .....+.++++++.. ..+++++|...
T Consensus 48 ~~~~dlvi~D~~l----~~~---~~~g~~~~~~l~~~~~~~~ii~~s~~~ 90 (136)
T 3kto_A 48 SDDAIGMIIEAHL----EDK---KDSGIELLETLVKRGFHLPTIVMASSS 90 (136)
T ss_dssp CTTEEEEEEETTG----GGB---TTHHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred ccCCCEEEEeCcC----CCC---CccHHHHHHHHHhCCCCCCEEEEEcCC
Confidence 4557788888751 110 023467777777652 46899999876
No 304
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=31.38 E-value=1.5e+02 Score=25.11 Aligned_cols=51 Identities=20% Similarity=0.175 Sum_probs=28.8
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
++.|++.|+.+|++|.+-. .+....+ ..+...+.+.|.+. |. +|++++...
T Consensus 88 ~~~l~~~~iPvV~~~~~~~--~~~~~~V~~D~~~~g~~a~~~L~~~-G~~~I~~i~~~~ 143 (289)
T 2fep_A 88 VAEFKRSPVPIVLAASVEE--QEETPSVAIDYEQAIYDAVKLLVDK-GHTDIAFVSGPM 143 (289)
T ss_dssp HHHHHHSSSCEEEESCCCT--TCCSCEEECCHHHHHHHHHHHHHHT-TCSSEEEEESCT
T ss_pred HHHHHhcCCCEEEEccccC--CCCCCEEEECcHHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 3456678888888876421 1111111 12345556666665 65 688887764
No 305
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=31.34 E-value=1.9e+02 Score=22.94 Aligned_cols=56 Identities=13% Similarity=0.213 Sum_probs=36.7
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+++.. +.+++||-|+..+... ....+.++.+.+.+|++++.-+.+..
T Consensus 97 ~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 155 (203)
T 1zbd_A 97 NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDN 155 (203)
T ss_dssp HHHHHHHHHHHHHSCSSCEEEEEEECTTCTTSCCSCHHHHHHHHHHHTCEEEECBTTTT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEECcccCcccccCHHHHHHHHHHCCCeEEEEECCCC
Confidence 34566777776531 5789999999855321 22346778888889988776554443
No 306
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=31.30 E-value=3.3e+02 Score=25.39 Aligned_cols=92 Identities=13% Similarity=0.172 Sum_probs=61.1
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-..+=. .-.+.+.+..+-+.. + ..++++-... ...++.+++..++|++--..
T Consensus 79 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvLs~-~-~D~iviR~~~--------~~~~~~lA~~~~vPVINa~~ 143 (325)
T 1vlv_A 79 AFAEEGGHPIFLSPNDIHL-----GAKESLEDTARVLGR-M-VDAIMFRGYK--------QETVEKLAEYSGVPVYNGLT 143 (325)
T ss_dssp HHHHTTCEEEEECTTTCCT-----TTSSCHHHHHHHHHT-T-CSEEEEESSC--------HHHHHHHHHHHCSCEEESCC
T ss_pred HHHHcCCeEEEECCccccC-----CCCcCHHHHHHHHHH-h-CCEEEEECCC--------hHHHHHHHHhCCCCEEeCCC
Confidence 3456799999998654322 223566777776665 3 4666665544 67888888888999986543
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||.
T Consensus 144 ~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 176 (325)
T 1vlv_A 144 DEFHPTQALADLMTIEENFGRLKGVKVVFMGDT 176 (325)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCSTTCEEEEESCT
T ss_pred CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC
Confidence 33444 2 557777887 455679999994
No 307
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=31.27 E-value=41 Score=32.55 Aligned_cols=67 Identities=18% Similarity=0.257 Sum_probs=33.0
Q ss_pred HHHHcCCcEEEE-ec----cCeee-cCCCcccCch-HHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 177 ELQRRGFKGVVF-DK----DNTLT-APYSLTLWGP-LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 177 ~Lk~~GIRaLVl-D~----DNTLT-~p~~~~l~Pg-v~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
.|++.|++++++ |. ||-++ ..+...+..+ -.+-|+++-++ ...| +++-.. ...++.+++++|+
T Consensus 191 lL~~~Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A-~~ni-~~~~~~--------~~~A~~Le~~~Gi 260 (458)
T 3pdi_B 191 SIESFGLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQS-VATL-VVGQSL--------AGAADALAERTGV 260 (458)
T ss_dssp HHHTTTCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSC-SCEE-EESGGG--------HHHHHHHHHHSCC
T ss_pred HHHHcCCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhC-cEEE-EecHHH--------HHHHHHHHHHHCC
Confidence 456789998875 65 66665 1111111111 12333333322 2222 232221 4566777777888
Q ss_pred cEEE
Q 022336 250 KVIR 253 (299)
Q Consensus 250 ~vI~ 253 (299)
+++.
T Consensus 261 P~~~ 264 (458)
T 3pdi_B 261 PDRR 264 (458)
T ss_dssp CEEE
T ss_pred CEEe
Confidence 7764
No 308
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=31.26 E-value=3.4e+02 Score=25.59 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=59.6
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.++.+.+=. .-.+.+.+..+-|.. + ..++++=-.. ...++.+++..++++|--..
T Consensus 87 A~~~LGg~~i~l~~~~s~l-----~kgEsl~DTarvLs~-~-~D~IviR~~~--------~~~~~~lA~~s~vPVINag~ 151 (353)
T 3sds_A 87 AVVKMGGHPMFLGKDDIQL-----GVNESLYDTSVVISS-M-VSCIVARVGP--------HSDIANLAKHSSVPVINALC 151 (353)
T ss_dssp HHHHTTCEEEEECTTTC-------CCSSCHHHHHHHHHT-S-CSEEEEECSS--------HHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHcCCeEEecCCccccc-----cCCccHHHHHHHHHH-h-cCEEEEEeCC--------hHHHHHHHhhCCCCEEECCC
Confidence 3456799999887765522 223677777777765 3 3444443332 56788888888999885422
Q ss_pred CCCHH--H---HHHHHHHhCC--------------CCCcEEEEcCCcc
Q 022336 257 KKPAG--T---AEEIEKHFGC--------------QSSQLIMVDMCRI 285 (299)
Q Consensus 257 KKP~p--~---le~alk~lGi--------------~PeEiamVGDrl~ 285 (299)
..-+| . +..+.+++|- +--.+++|||-.+
T Consensus 152 d~~HPtQaLaDl~TI~E~~G~~~~~~~~~~~~~~l~glkva~vGD~~n 199 (353)
T 3sds_A 152 DTFHPLQAIADFLTIHESFASQSATHGTHPSSLGLEGLKIAWVGDANN 199 (353)
T ss_dssp SSCCHHHHHHHHHHHHHHTC--------CTTCCSCTTCEEEEESCCCH
T ss_pred CCCCcHHHHHHHHHHHHHhCCCcccccccccccccCCCEEEEECCCch
Confidence 23334 2 5567788873 4557999999643
No 309
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=31.19 E-value=1.6e+02 Score=21.69 Aligned_cols=43 Identities=7% Similarity=0.064 Sum_probs=27.0
Q ss_pred HHH-cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH--h-CCCcEEEEeCCC
Q 022336 178 LQR-RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS--V-FGHDIAVFSNSA 228 (299)
Q Consensus 178 Lk~-~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke--~-fGikVaIVSNna 228 (299)
+++ ..+.+|++|.+- ++ .....+.++++++ . .+.+++++|...
T Consensus 45 l~~~~~~dlvi~D~~l----~~----~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 91 (140)
T 3lua_A 45 FKDLDSITLIIMDIAF----PV----EKEGLEVLSAIRNNSRTANTPVIIATKSD 91 (140)
T ss_dssp TTTCCCCSEEEECSCS----SS----HHHHHHHHHHHHHSGGGTTCCEEEEESCC
T ss_pred HhcCCCCcEEEEeCCC----CC----CCcHHHHHHHHHhCcccCCCCEEEEeCCC
Confidence 344 667888888652 10 1234566777766 2 257899999876
No 310
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=31.18 E-value=15 Score=29.07 Aligned_cols=32 Identities=16% Similarity=0.290 Sum_probs=25.4
Q ss_pred cCCCCcCCccccCCcCCC---CHHHHHHcCCcEEE
Q 022336 156 KDRHLALPHVTVPDIRYI---DWAELQRRGFKGVV 187 (299)
Q Consensus 156 ~~p~ll~P~~~v~sI~~I---d~~~Lk~~GIRaLV 187 (299)
++++-+.|.+++.+.... |.+.|++.||+.||
T Consensus 4 ~~~~~I~~~lylG~~~~~~~~d~~~L~~~gI~~Vi 38 (154)
T 2r0b_A 4 REMQEILPGLFLGPYSSAMKSKLPVLQKHGITHII 38 (154)
T ss_dssp CSCEEEETTEEEECGGGGSGGGHHHHHHTTCCEEE
T ss_pred cchheEeCCeEECCHHHhhhccHHHHHHcCCeEEE
Confidence 455667899999877654 67889999999887
No 311
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=31.10 E-value=87 Score=23.22 Aligned_cols=57 Identities=11% Similarity=0.120 Sum_probs=35.5
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
.+.+.|++|+.++=.-+. .--.-+....+++++. |.++.++.=+ +.++.+.+..|+.
T Consensus 40 ~~~~~vvlDls~v~~iDs--sgl~~L~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl~ 96 (117)
T 1h4x_A 40 GAVTTIIWNFERLSFMDS--SGVGLVLGRMRELEAV-AGRTILLNPS----------PTMRKVFQFSGLG 96 (117)
T ss_dssp TSCSEEEEEEEEEEEECT--HHHHHHHHHHHHHHTT-TCEEEEESCC----------HHHHHHHHHTTCG
T ss_pred CCCCEEEEECCCCcEech--HHHHHHHHHHHHHHHc-CCEEEEEeCC----------HHHHHHHHHhCCc
Confidence 478899999988755111 1111223344556665 8888776433 4678888888874
No 312
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=30.87 E-value=19 Score=27.78 Aligned_cols=109 Identities=11% Similarity=0.131 Sum_probs=54.2
Q ss_pred CCccccCCc----CCCCHHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC---CCcEEEEeCCCCCCCCC
Q 022336 162 LPHVTVPDI----RYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF---GHDIAVFSNSAGLYEYD 234 (299)
Q Consensus 162 ~P~~~v~sI----~~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f---GikVaIVSNnaGs~~~d 234 (299)
.|++.+.++ ..+++..++ | |.+++++=.|-. +..... ....|.++.+.+ |+.++-|+-... ...+
T Consensus 6 aP~f~l~~~~~~g~~~~l~~~~--g-k~vlv~f~a~wC-~~C~~~---~~~~l~~l~~~~~~~~v~~v~v~~~~~-~~~~ 77 (158)
T 3eyt_A 6 APELQIQQWFNSATDLTLADLR--G-KVIVIEAFQMLC-PGCVMH---GIPLAQKVRAAFPEDKVAVLGLHTVFE-HHEA 77 (158)
T ss_dssp CCCCCEEEEESCSSCCCTGGGT--T-SEEEEEEECTTC-HHHHHT---HHHHHHHHHHHSCTTTEEEEEEECCCS-CGGG
T ss_pred CCCceehhhhcCCCccCHHHhC--C-CEEEEEEECCcC-cchhhh---hhHHHHHHHHHhCcCCEEEEEEEeccc-cccc
Confidence 567776663 336666653 4 778887755444 112121 133344444433 455555553210 0011
Q ss_pred ccHHHHHHHHHHcCCcE--EEccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 022336 235 NDASKARKLEGKIGIKV--IRHRVKKPAGTAEEIEKHFGCQSSQLIMV 280 (299)
Q Consensus 235 ~~~e~a~~~lk~LGI~v--I~ha~KKP~p~le~alk~lGi~PeEiamV 280 (299)
.+.+.++.+.+..|+.+ +...... ..+.++++.+|+..--..+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~v~~~P~~~l 123 (158)
T 3eyt_A 78 MTPISLKAFLHEYRIKFPVGVDQPGD--GAMPRTMAAYQMRGTPSLLL 123 (158)
T ss_dssp SCHHHHHHHHHHTTCCSCEEEECCCS--SSSCHHHHHTTCCSSSEEEE
T ss_pred CCHHHHHHHHHHcCCCceEEEcCccc--hhhHHHHHHcCCCCCCEEEE
Confidence 23678888888888753 2222111 11224677788754443333
No 313
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=30.65 E-value=62 Score=28.60 Aligned_cols=95 Identities=6% Similarity=-0.005 Sum_probs=46.4
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccC-chHHHHHHHHHHhCCCcEEEEe-CCCCCCCCCccHHHHHHHHHHcCCcEEEc
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLW-GPLSSSIEQCKSVFGHDIAVFS-NSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~-Pgv~e~L~~Lke~fGikVaIVS-NnaGs~~~d~~~e~a~~~lk~LGI~vI~h 254 (299)
.|.+.|.|-|.+ |+.+...... ....-+.+.+++. |+. .++. ... ..+...+.++.+++...+..++-
T Consensus 168 ~L~~~G~~~I~~-----i~~~~~~~~~~~R~~Gf~~al~~~-g~~-~~~~~~~~---~~~~~~~~~~~ll~~~~~~ai~~ 237 (333)
T 3jvd_A 168 SVLGGSGMNIAA-----LVGEESLSTTQERMRGISHAASIY-GAE-VTFHFGHY---SVESGEEMAQVVFNNGLPDALIV 237 (333)
T ss_dssp HHCCSSSCEEEE-----EESCTTSHHHHHHHHHHHHHHHHT-TCE-EEEEECCS---SHHHHHHHHHHHHHTCCCSEEEE
T ss_pred HHHHCCCCeEEE-----EeCCCCCccHHHHHHHHHHHHHHC-CCC-EEEecCCC---CHHHHHHHHHHHhcCCCCcEEEE
Confidence 455677776654 3322111111 1222233345554 887 4444 322 01112234455555444444443
Q ss_pred cCCCCHHHHHHHHHHhCCC-CCcEEEEc
Q 022336 255 RVKKPAGTAEEIEKHFGCQ-SSQLIMVD 281 (299)
Q Consensus 255 a~KKP~p~le~alk~lGi~-PeEiamVG 281 (299)
..---..++.++++..|+. |+++.+||
T Consensus 238 ~nd~~A~g~~~al~~~G~~vP~disvig 265 (333)
T 3jvd_A 238 ASPRLMAGVMRAFTRLNVRVPHDVVIGG 265 (333)
T ss_dssp CCHHHHHHHHHHHHHTTCCTTTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCCCCceEEEE
Confidence 2111112567888999987 78998888
No 314
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=30.52 E-value=1.8e+02 Score=22.23 Aligned_cols=56 Identities=9% Similarity=0.125 Sum_probs=36.5
Q ss_pred chHHHHHHHHHHh--CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSV--FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~--fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+.+|+..+.+. .+.+++||-|+..+... ....+.++.+.+.+|++++.-+.+..
T Consensus 100 ~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 158 (180)
T 2g6b_A 100 DNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTG 158 (180)
T ss_dssp HTHHHHHHHHHHHSCTTCEEEEEEECCSTTSCCCSCHHHHHHHHHHHTCCEEECCTTTC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEEECcccCcccccCHHHHHHHHHHcCCeEEEEeCCCC
Confidence 3455677666552 26789999999854321 12345677788888988877665444
No 315
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=30.50 E-value=1.5e+02 Score=22.43 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=34.6
Q ss_pred chHHHHHHHHHHh--CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSV--FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~--fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+++. .+.+++||-|+..+... ....+.++.+.+.+|++++.-+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 153 (170)
T 1z08_A 95 QKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQN 153 (170)
T ss_dssp HHHHHHHHHHHHHHGGGSEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEEEEBTTTT
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEEECcccccccccCHHHHHHHHHHcCCeEEEecCCCC
Confidence 3455666665542 15789999999854321 12345777888888987776554443
No 316
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=30.47 E-value=1.8e+02 Score=24.28 Aligned_cols=19 Identities=5% Similarity=0.071 Sum_probs=11.7
Q ss_pred HHHHHHHhCCC-CCcEEEEc
Q 022336 263 AEEIEKHFGCQ-SSQLIMVD 281 (299)
Q Consensus 263 le~alk~lGi~-PeEiamVG 281 (299)
+.++++..|+. |+++.+||
T Consensus 192 ~~~al~~~g~~vP~di~vvg 211 (277)
T 3cs3_A 192 VYKYVAETNYQMGKDIRIIG 211 (277)
T ss_dssp HHHHHTTSSCCBTTTEEEEC
T ss_pred HHHHHHHcCCCCCCcEEEEE
Confidence 34555566665 67777776
No 317
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=30.40 E-value=1.7e+02 Score=21.91 Aligned_cols=44 Identities=14% Similarity=0.001 Sum_probs=29.5
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++.. +.+++++|+..
T Consensus 45 ~~l~~~~~dlii~D~~l----~~-----~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 45 RLYRETTPDIVVMDLTL----PG-----PGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHTTCCSEEEECSCC----SS-----SCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHhcCCCCEEEEecCC----CC-----CCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 44566778999999863 11 23456677776642 46899999876
No 318
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=30.30 E-value=72 Score=25.83 Aligned_cols=79 Identities=25% Similarity=0.215 Sum_probs=45.1
Q ss_pred cCCccccC-CcC--CCCHHHHHHcCCcEEEEeccCeeecCCCcc-cCchHHHHHHHHHHhCCC-cEEEEeCCCCCCCCCc
Q 022336 161 ALPHVTVP-DIR--YIDWAELQRRGFKGVVFDKDNTLTAPYSLT-LWGPLSSSIEQCKSVFGH-DIAVFSNSAGLYEYDN 235 (299)
Q Consensus 161 l~P~~~v~-sI~--~Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~-l~Pgv~e~L~~Lke~fGi-kVaIVSNnaGs~~~d~ 235 (299)
-.|++.++ +.. .+++..+. +|-.+|++-.=++-+ +.-.. -.|.+.+..+++++. |+ .|+.||-..
T Consensus 8 ~aP~f~l~~~~~G~~v~L~d~~-~Gk~vvl~f~~a~wc-p~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~------- 77 (167)
T 2wfc_A 8 KLPAVTVFGATPNDKVNMAELF-AGKKGVLFAVPGAFT-PGSSKTHLPGYVEQAAAIHGK-GVDIIACMAVND------- 77 (167)
T ss_dssp BCCCCEEESSSTTCEEEHHHHT-TTSEEEEEEESCTTC-HHHHHTHHHHHHHTHHHHHHT-TCCEEEEEESSC-------
T ss_pred cCCCcEeecCCCCcEEeHHHHh-CCCcEEEEEeCCCCC-CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC-------
Confidence 46777776 543 34555541 343444444434333 21112 234455556667775 89 888888653
Q ss_pred cHHHHHHHHHHcCCc
Q 022336 236 DASKARKLEGKIGIK 250 (299)
Q Consensus 236 ~~e~a~~~lk~LGI~ 250 (299)
.+.++.+.++.|++
T Consensus 78 -~~~~~~~~~~~~~~ 91 (167)
T 2wfc_A 78 -SFVMDAWGKAHGAD 91 (167)
T ss_dssp -HHHHHHHHHHTTCT
T ss_pred -HHHHHHHHHhcCCC
Confidence 56778888888775
No 319
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=30.24 E-value=3.6e+02 Score=25.56 Aligned_cols=92 Identities=15% Similarity=0.070 Sum_probs=61.1
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-.++=. .-.+.+.+..+-|..- ..++++-... ...++.+++..+++++--..
T Consensus 88 A~~~LGg~vi~l~~~~ss~-----~kgEsl~DTarvLs~~--~D~IviR~~~--------~~~~~~lA~~s~vPVINa~~ 152 (359)
T 2w37_A 88 ASIDLGAHPEYLGQNDIQL-----GKKESTSDTAKVLGSM--FDGIEFRGFK--------QSDAEILARDSGVPVWNGLT 152 (359)
T ss_dssp HHHHTTCEEEEECTTTCCT-----TTSSCHHHHHHHHHHH--CSEEEEESSC--------HHHHHHHHHHSSSCEEEEEC
T ss_pred HHHHcCCeEEEeCCccccC-----CCCcCHHHHHHHHHHh--cCEEEEecCC--------hHHHHHHHHhCCCCEEcCCC
Confidence 3456799999998654322 2235666777666663 4666665544 67888899889999885433
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||.
T Consensus 153 ~~~HPtQaLaDl~Ti~E~~g~l~gl~va~vGD~ 185 (359)
T 2w37_A 153 DEWHPTQMLADFMTVKENFGKLQGLTLTFMGDG 185 (359)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCT
T ss_pred CCCCccHHHHHHHHHHHHhCCcCCeEEEEECCC
Confidence 33334 2 567777887 455679999995
No 320
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=30.22 E-value=1.9e+02 Score=22.21 Aligned_cols=56 Identities=13% Similarity=0.125 Sum_probs=37.1
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+.+|+..+.+.. +.+++||-|+..+... ....+.++.+.+..|++++.-+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~g 159 (181)
T 2efe_B 101 ERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTA 159 (181)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEEECCSSSC
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEECCcccccccCCHHHHHHHHHHcCCEEEEEECCCC
Confidence 44567777776642 5679999999854321 22356777888888988777665444
No 321
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=30.20 E-value=86 Score=23.00 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=34.6
Q ss_pred CCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 182 GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
+.+.|++|+.++=. -+ ..--.-+....+++++. |.++.++.=+ +.+..+.+..|+.
T Consensus 42 ~~~~vvlDls~v~~-iD-ssgl~~L~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl~ 97 (116)
T 1th8_B 42 AIRHIVLNLGQLTF-MD-SSGLGVILGRYKQIKNV-GGQMVVCAVS----------PAVKRLFDMSGLF 97 (116)
T ss_dssp CCCEEEEEEEEEEE-EC-HHHHHHHHHHHHHHHHT-TCCEEEESCC----------HHHHHHHHHHTGG
T ss_pred CCcEEEEECCCCcE-Ec-cHHHHHHHHHHHHHHHh-CCeEEEEeCC----------HHHHHHHHHhCCc
Confidence 38899999988755 11 11112233445567776 8888776543 4677777777753
No 322
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=30.19 E-value=1.9e+02 Score=23.01 Aligned_cols=75 Identities=12% Similarity=0.038 Sum_probs=45.6
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCC---CCCccHHHHHHHHHHcC-C
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLY---EYDNDASKARKLEGKIG-I 249 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~---~~d~~~e~a~~~lk~LG-I 249 (299)
.++....=.+|+|.++-- -...+..|+..+.+. .+.+++||-|+..+. ......+.+..+++.+| +
T Consensus 82 ~~~~~~~~i~v~d~~~~~-------s~~~~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~~~~v~~~~~~~~~~~~~~~ 154 (184)
T 3ihw_A 82 FAAWVDAVVFVFSLEDEI-------SFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAANPRVIDDSRARKLSTDLKRC 154 (184)
T ss_dssp HHHHCSEEEEEEETTCHH-------HHHHHHHHHHHHHTTSCGGGSCEEEEEECTTCBTTBCCCSCHHHHHHHHHHTTTC
T ss_pred eecCCCEEEEEEECcCHH-------HHHHHHHHHHHHHHhcCCCCCCEEEEEECcccccccccccCHHHHHHHHHHcCCC
Confidence 344455556677765421 124456677777653 257899999997542 11234567888888887 7
Q ss_pred cEEEccCCC
Q 022336 250 KVIRHRVKK 258 (299)
Q Consensus 250 ~vI~ha~KK 258 (299)
.++.-+.+.
T Consensus 155 ~~~e~Sa~~ 163 (184)
T 3ihw_A 155 TYYETCATY 163 (184)
T ss_dssp EEEEEBTTT
T ss_pred eEEEecCCC
Confidence 776555433
No 323
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=30.17 E-value=74 Score=26.99 Aligned_cols=51 Identities=20% Similarity=0.231 Sum_probs=32.2
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
+.+++.||.+|++|.+-.- +.-..+ ......+.+.|.+. |. +|++++...+
T Consensus 81 ~~~~~~~iPvV~~~~~~~~--~~~~~V~~D~~~~g~~a~~~L~~~-G~~~i~~i~~~~~ 136 (291)
T 3egc_A 81 RTELPKTFPIVAVNRELRI--PGCGAVLSENVRGARTAVEYLIAR-GHTRIGAIVGSAG 136 (291)
T ss_dssp HHSSCTTSCEEEESSCCCC--TTCEEEEECHHHHHHHHHHHHHHT-TCCSEEEECSCTT
T ss_pred HHhhccCCCEEEEecccCC--CCCCEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCCC
Confidence 4455689999999876431 111111 23445666777776 76 7999988764
No 324
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=30.07 E-value=64 Score=33.28 Aligned_cols=49 Identities=14% Similarity=0.213 Sum_probs=33.4
Q ss_pred HHHHcCCcEEEEe---c---c------CeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCC
Q 022336 177 ELQRRGFKGVVFD---K---D------NTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNS 227 (299)
Q Consensus 177 ~Lk~~GIRaLVlD---~---D------NTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNn 227 (299)
.+++.|+..|++| . | |-++ ++...+..++...++++++. |++++|=.+-
T Consensus 358 ~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~-~d~~kFP~Glk~lv~~ih~~-Glk~GlW~~P 418 (732)
T 2xn2_A 358 KAKKLGLEMFVLDDGWFGHRDDDNSSLGDWK-VYKKKFPNGLGHFADYVHEQ-GLKFGLWFEP 418 (732)
T ss_dssp HHHHTTCCEEEECSSSBTTCSSTTSCTTCCS-BCTTTCTTCHHHHHHHHHHT-TCEEEEEECT
T ss_pred HHHHcCCcEEEEcCcccccCCCCccccCcee-eCchhcCccHHHHHHHHHHc-CCEEEEEeCc
Confidence 4467899999999 1 1 2232 22222334689999999997 9999887654
No 325
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=29.97 E-value=1.1e+02 Score=23.80 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=52.1
Q ss_pred cCCccccCCcCC--CCHHHHHHcCCcEEEEec-cCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccH
Q 022336 161 ALPHVTVPDIRY--IDWAELQRRGFKGVVFDK-DNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA 237 (299)
Q Consensus 161 l~P~~~v~sI~~--Id~~~Lk~~GIRaLVlD~-DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~ 237 (299)
-.|++.+.+... +++..++.++ +.+|+.. =+|-+ +....-.|.+.+..+++++. | .|+.||... .
T Consensus 12 ~~P~f~l~~~~G~~v~l~~~~gk~-~~vvl~f~~~~~c-~~C~~~~~~l~~~~~~~~~~-~-~vv~is~d~--------~ 79 (159)
T 2a4v_A 12 PIPDLSLLNEDNDSISLKKITENN-RVVVFFVYPRAST-PGSTRQASGFRDNYQELKEY-A-AVFGLSADS--------V 79 (159)
T ss_dssp BCCSCEEECTTSCEEEHHHHHHHC-SEEEEEECSSSSS-HHHHHHHHHHHHHHHHHTTT-C-EEEEEESCC--------H
T ss_pred CCCCeEEECCCCCEEeHHHHhCCC-CeEEEEEcCCCCC-CCHHHHHHHHHHHHHHHHhC-C-cEEEEeCCC--------H
Confidence 467777766543 6667775543 3455553 23333 11122234445555556555 7 777777653 5
Q ss_pred HHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCC
Q 022336 238 SKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQS 274 (299)
Q Consensus 238 e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~P 274 (299)
+.++.+.+..|+++-... .+.. ++.+.+|+..
T Consensus 80 ~~~~~~~~~~~~~~~~l~--D~~~---~~~~~~gv~~ 111 (159)
T 2a4v_A 80 TSQKKFQSKQNLPYHLLS--DPKR---EFIGLLGAKK 111 (159)
T ss_dssp HHHHHHHHHHTCSSEEEE--CTTC---HHHHHHTCBS
T ss_pred HHHHHHHHHhCCCceEEE--CCcc---HHHHHhCCcc
Confidence 667788888887532211 1211 3556777753
No 326
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=29.92 E-value=1.2e+02 Score=26.35 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=56.5
Q ss_pred ccCCcCCCCHH-------HHHHcCCcEEEEec-cCeeecCCCcccCchHHHHHHHHH--HhCCCcEEEEeCCCCCCCCCc
Q 022336 166 TVPDIRYIDWA-------ELQRRGFKGVVFDK-DNTLTAPYSLTLWGPLSSSIEQCK--SVFGHDIAVFSNSAGLYEYDN 235 (299)
Q Consensus 166 ~v~sI~~Id~~-------~Lk~~GIRaLVlD~-DNTLT~p~~~~l~Pgv~e~L~~Lk--e~fGikVaIVSNnaGs~~~d~ 235 (299)
..+||...|+. .+.+.|.+.+-+|+ ||..+ |+ ..+.+.+.+.|++.. .. -+.+-+..+++
T Consensus 7 i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fv-pn-~~~G~~~v~~ir~~~~~~~-~~dvhLmv~~p------- 76 (228)
T 3ovp_A 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFV-PN-ITFGHPVVESLRKQLGQDP-FFDMHMMVSKP------- 76 (228)
T ss_dssp EEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSS-SC-BCBCHHHHHHHHHHHCSSS-CEEEEEECSCG-------
T ss_pred eeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcC-cc-cccCHHHHHHHHHhhCCCC-cEEEEEEeCCH-------
Confidence 34677777774 44568999999996 88877 43 346777777777652 22 23455677877
Q ss_pred cHHHHHHHHHHcCCcEE-EccCCCCHH-HHHHHHHHhCC
Q 022336 236 DASKARKLEGKIGIKVI-RHRVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 236 ~~e~a~~~lk~LGI~vI-~ha~KKP~p-~le~alk~lGi 272 (299)
...++.+ .+.|.+.+ .|...-+.. ...+.++..|+
T Consensus 77 -~~~i~~~-~~aGad~itvH~Ea~~~~~~~i~~i~~~G~ 113 (228)
T 3ovp_A 77 -EQWVKPM-AVAGANQYTFHLEATENPGALIKDIRENGM 113 (228)
T ss_dssp -GGGHHHH-HHHTCSEEEEEGGGCSCHHHHHHHHHHTTC
T ss_pred -HHHHHHH-HHcCCCEEEEccCCchhHHHHHHHHHHcCC
Confidence 3345544 34677654 343211222 24445566675
No 327
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=29.82 E-value=2.6e+02 Score=23.81 Aligned_cols=71 Identities=14% Similarity=0.162 Sum_probs=40.1
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-----CCcEEEEeCCCCCCCCCcc-------HHHHHHHHHHcC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-----GHDIAVFSNSAGLYEYDND-------ASKARKLEGKIG 248 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-----GikVaIVSNnaGs~~~d~~-------~e~a~~~lk~LG 248 (299)
.+..++++-+|.+ .+......+++.+++.+ +.+++|++|+..+...+.. .+..+.+.+.+|
T Consensus 104 ~~~d~il~V~d~~-------~~~~~~~~~~~~l~~~~~~~~~~~~iilv~nK~Dl~~~~~~~~l~~~~~~~l~~l~~~~g 176 (247)
T 3lxw_A 104 PGPHALLLVTQLG-------RFTAQDQQAVRQVRDMFGEDVLKWMVIVFTRKEDLAGGSLHDYVSNTENRALRELVAECG 176 (247)
T ss_dssp TCCSEEEEEEETT-------BCCHHHHHHHHHHHHHHCGGGGGGEEEEEECGGGGTTCCHHHHHHHCCCHHHHHHHHHTT
T ss_pred CCCCEEEEEEeCC-------CCCHHHHHHHHHHHHHhChhhhccEEEEEEchHhcCCCCHHHHHhhcccHHHHHHHHHcC
Confidence 5777777777753 12344444555555533 4679999999744211100 123566777788
Q ss_pred CcEEEccCCC
Q 022336 249 IKVIRHRVKK 258 (299)
Q Consensus 249 I~vI~ha~KK 258 (299)
..++....+.
T Consensus 177 ~~~~~~~~~~ 186 (247)
T 3lxw_A 177 GRVCAFDNRA 186 (247)
T ss_dssp TCEEECCTTC
T ss_pred CeEEEEeCCC
Confidence 7776554433
No 328
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=29.73 E-value=16 Score=37.00 Aligned_cols=19 Identities=37% Similarity=0.422 Sum_probs=15.4
Q ss_pred cCCcEEEEeccCeeecCCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSL 200 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~ 200 (299)
..++.|+|||.|||| .+..
T Consensus 324 g~v~~i~fDKTGTLT-~~~~ 342 (645)
T 3j08_A 324 EKVTAVIFDKTGTLT-KGKP 342 (645)
T ss_dssp GGCCEEEEEGGGTSS-SSCC
T ss_pred hCCCEEEEcCccccc-CCCe
Confidence 468999999999999 4433
No 329
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=29.40 E-value=92 Score=27.23 Aligned_cols=51 Identities=14% Similarity=0.023 Sum_probs=31.1
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
++.|++.|+..|++|.+- ..+.-..+ ..+...+.+.|.+. |. +|++++...
T Consensus 135 ~~~l~~~~iPvV~~~~~~--~~~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~ 190 (332)
T 2o20_A 135 RTSLKNSRTPVVLVGTID--GDKEIPSVNIDYHLAAYQSTKKLIDS-GNKKIAYIMGSL 190 (332)
T ss_dssp HHHHHHHCCCEEEESCCC--TTSCSCEEECCHHHHHHHHHHHHHHT-TCSSEEEECSCT
T ss_pred HHHHHhCCCCEEEEcccc--CCCCCCEEEeChHHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 356677899999998642 11111111 13445566677776 76 699998765
No 330
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=29.40 E-value=89 Score=25.94 Aligned_cols=98 Identities=11% Similarity=0.083 Sum_probs=47.3
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHH-HHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcC--CcEE
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSI-EQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG--IKVI 252 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L-~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LG--I~vI 252 (299)
+.|.+.|.+-|++ ++.+........-.+.+ +.+++ .|+++.++-.... ..+...+.++.+++... +..+
T Consensus 113 ~~L~~~G~~~i~~-----i~~~~~~~~~~~R~~gf~~~l~~-~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~ai 184 (272)
T 3o74_A 113 ASLLSSAPRSIAL-----IGARPELSVSQARAGGFDEALQG-YTGEVRRYQGEAF--SRECGQRLMQQLIDDLGGLPDAL 184 (272)
T ss_dssp HHHHTTCCSEEEE-----EEECTTSHHHHHHHHHHHHHTTT-CCSEEEEEEESSS--SHHHHHHHHHHHHHHHTSCCSEE
T ss_pred HHHHHCCCcEEEE-----EecCCCCccHHHHHHHHHHHHHH-cCCChheeecCCC--CHHHHHHHHHHHHhcCCCCCcEE
Confidence 4566778776654 23222111111122233 33444 4876544432210 11112234555555543 5555
Q ss_pred EccCCCCHHHHHHHHHHhCCCCCcEEEEc
Q 022336 253 RHRVKKPAGTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 253 ~ha~KKP~p~le~alk~lGi~PeEiamVG 281 (299)
+-..---..++.++++..|+-|+++.+||
T Consensus 185 ~~~~d~~a~g~~~al~~~g~vp~di~vvg 213 (272)
T 3o74_A 185 VTTSYVLLQGVFDTLQARPVDSRQLQLGT 213 (272)
T ss_dssp EESSHHHHHHHHHHHHTSCGGGCCCEEEE
T ss_pred EEeCchHHHHHHHHHHHcCCCccceEEEE
Confidence 43211111246788888997688988888
No 331
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=29.36 E-value=1.8e+02 Score=21.80 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=35.6
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCCC----CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY----DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~----d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+.+.. +.+++||-|+..+... ....+.++.+.+..|++++.-+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~ 153 (170)
T 1ek0_A 92 IKARHWVKELHEQASKDIIIALVGNKIDXLQEGGERKVAREEGEKLAEEKGLLFFETSAKTG 153 (170)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECGGGGGSSCCCCSCHHHHHHHHHHHTCEEEECCTTTC
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEECCCccccccccCCCHHHHHHHHHHcCCEEEEEeCCCC
Confidence 45566777766532 5789999999754321 12345667777888988776655443
No 332
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=29.33 E-value=2e+02 Score=23.15 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=36.2
Q ss_pred chHHHHHHHHHHh--CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCC-cEEEccCCCC
Q 022336 204 GPLSSSIEQCKSV--FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGI-KVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~--fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI-~vI~ha~KKP 259 (299)
..+.+|+..+++. .+.+++||-|+..+... ....+.++.+++.+|+ +++.-+.+..
T Consensus 118 ~~~~~~~~~i~~~~~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~~SA~~g 177 (201)
T 2hup_A 118 LSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDS 177 (201)
T ss_dssp HTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCSEEEECBTTTT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEECCccccccccCHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 4556777777653 25789999999854321 1234567888888998 7766554443
No 333
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=29.23 E-value=1.9e+02 Score=24.11 Aligned_cols=51 Identities=14% Similarity=0.168 Sum_probs=28.9
Q ss_pred HHHHHH-cCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQR-RGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~-~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
++.+++ .|+..|++|.+-. ...-..+ ..+...+.+.|.+. |. +|++++...
T Consensus 93 ~~~l~~~~~iPvV~~~~~~~--~~~~~~V~~d~~~~~~~a~~~l~~~-G~~~I~~i~~~~ 149 (296)
T 3brq_A 93 IDDIIDAHSQPIMVLNRRLR--KNSSHSVWCDHKQTSFNAVAELINA-GHQEIAFLTGSM 149 (296)
T ss_dssp HHHHHHTCSSCEEEESCCCS--SSGGGEECCCHHHHHHHHHHHHHHT-TCCSEEEECCCT
T ss_pred HHHHHhcCCCCEEEEccccC--CCCCCEEEEchHHHHHHHHHHHHHC-CCceEEEEcCCC
Confidence 356677 8999888875421 0111111 12334555666665 65 688888764
No 334
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=28.92 E-value=1.6e+02 Score=24.51 Aligned_cols=51 Identities=6% Similarity=0.047 Sum_probs=30.3
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
++.+++.|+..|++|.+- ..+.-..+ ..+...+.+.|.+. |. +|++++...
T Consensus 75 ~~~l~~~~iPvV~~~~~~--~~~~~~~V~~d~~~~~~~a~~~L~~~-G~~~i~~i~~~~ 130 (275)
T 3d8u_A 75 HQLLEASNTPVLEIAELS--SKASYLNIGVDHFEVGKACTRHLIEQ-GFKNVGFIGARG 130 (275)
T ss_dssp HHHHHHHTCCEEEESSSC--SSSSSEEECBCHHHHHHHHHHHHHTT-TCCCEEEEECSC
T ss_pred HHHHHhCCCCEEEEeecc--CCCCCCEEEEChHHHHHHHHHHHHHC-CCCeEEEEcCCC
Confidence 356677899999997641 11111111 12345556667775 75 689988764
No 335
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=28.89 E-value=1.8e+02 Score=21.55 Aligned_cols=44 Identities=7% Similarity=0.011 Sum_probs=29.9
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++....+++++|...
T Consensus 42 ~~~~~~~~dlvllD~~l----~~-----~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 42 GKIFSNKYDLIFLEIIL----SD-----GDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp HHHHHCCCSEEEEESEE----TT-----EEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHhcCCCEEEEeCCC----CC-----CCHHHHHHHHccCCCCCEEEEEcCC
Confidence 44556788999999752 22 1235677777765457899999876
No 336
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=28.86 E-value=1.8e+02 Score=24.67 Aligned_cols=97 Identities=8% Similarity=0.070 Sum_probs=48.4
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccC-chHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHc----CCc
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLW-GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI----GIK 250 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~-Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~L----GI~ 250 (299)
+.|.+.|.|-|.+ |+.+...... ....-+.+.+++. |+.+.++.... ..+...+.++.+++.. .+.
T Consensus 124 ~~L~~~G~~~I~~-----i~~~~~~~~~~~R~~Gf~~al~~~-g~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~ 194 (295)
T 3hcw_A 124 RHVIEQGVDELIF-----ITEKGNFEVSKDRIQGFETVASQF-NLDYQIIETSN---EREVILNYMQNLHTRLKDPNIKQ 194 (295)
T ss_dssp HHHHHHCCSEEEE-----EEESSCCHHHHHHHHHHHHHHHHT-TCEEEEEEECS---CHHHHHHHHHHHHHHHTCTTSCE
T ss_pred HHHHHcCCccEEE-----EcCCccchhHHHHHHHHHHHHHHc-CCCeeEEeccC---CHHHHHHHHHHHHhhcccCCCCc
Confidence 4667788876654 3322211111 1222233345554 88765554332 0111123445555544 344
Q ss_pred EEEccCCCCHHHHHHHHHHhCCC-CCcEEEEc
Q 022336 251 VIRHRVKKPAGTAEEIEKHFGCQ-SSQLIMVD 281 (299)
Q Consensus 251 vI~ha~KKP~p~le~alk~lGi~-PeEiamVG 281 (299)
.++-..---..++.++++..|+. |+++.+||
T Consensus 195 ai~~~~d~~A~g~~~al~~~g~~vP~di~vig 226 (295)
T 3hcw_A 195 AIISLDAMLHLAILSVLYELNIEIPKDVMTAT 226 (295)
T ss_dssp EEEESSHHHHHHHHHHHHHTTCCTTTTEEEEE
T ss_pred EEEECChHHHHHHHHHHHHcCCCCCCceEEEE
Confidence 44432111112467788889987 78999988
No 337
>2nn4_A Hypothetical protein YQGQ; novel fold, PFAM:DUF910, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: a.272.1.1
Probab=28.61 E-value=6.5 Score=29.73 Aligned_cols=21 Identities=19% Similarity=0.393 Sum_probs=11.3
Q ss_pred HHHHHHHhCCCCCcEEEEcCCcccc
Q 022336 263 AEEIEKHFGCQSSQLIMVDMCRIVI 287 (299)
Q Consensus 263 le~alk~lGi~PeEiamVGDrl~DI 287 (299)
+.++++.||+ ++|+||+..||
T Consensus 8 VqQLLK~fG~----~IY~GdR~~Di 28 (72)
T 2nn4_A 8 VQQLLKTFGH----IVYFGDRELEI 28 (72)
T ss_dssp HHHHHHTTTC----CCCCSCHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHH
Confidence 4455555554 55556555553
No 338
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=28.56 E-value=2.1e+02 Score=26.08 Aligned_cols=70 Identities=14% Similarity=0.074 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCc-EEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEEc
Q 022336 207 SSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 207 ~e~L~~Lke~fGik-VaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiamVG 281 (299)
...|+.|.+. |+. ++|+|+...-. .......+..+++++||+++.....+ .+.+.+.++.+ +|+=++++|
T Consensus 13 ~~~L~~L~~~-~~~i~~Vvt~~d~~~-g~~~~~~v~~~A~~~gIpv~~~~~~~-~~~~~~~l~~~--~~Dliv~~~ 83 (305)
T 2bln_A 13 CLGIEALLAA-GYEISAIFTHTDNPG-EKAFYGSVARLAAERGIPVYAPDNVN-HPLWVERIAQL--SPDVIFSFY 83 (305)
T ss_dssp HHHHHHHHHT-TCEEEEEECCCC-------CCCCHHHHHHHHTCCEECCSCCC-SHHHHHHHHHT--CCSEEEEES
T ss_pred HHHHHHHHHC-CCcEEEEEcCCCCCC-CCcCccHHHHHHHHcCCCEECCCcCC-cHHHHHHHHhc--CCCEEEEec
Confidence 4567777775 776 57889865100 00000137788889999987543222 23444555544 566677777
No 339
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=28.47 E-value=76 Score=23.42 Aligned_cols=42 Identities=10% Similarity=-0.006 Sum_probs=26.1
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
++...+.+|++|.+- ++ ....+.++++++.. ..+++++|...
T Consensus 55 l~~~~~dlvi~D~~l----~~-----~~g~~~~~~l~~~~~~~~ii~~s~~~ 97 (135)
T 3snk_A 55 PADTRPGIVILDLGG----GD-----LLGKPGIVEARALWATVPLIAVSDEL 97 (135)
T ss_dssp CTTCCCSEEEEEEET----TG-----GGGSTTHHHHHGGGTTCCEEEEESCC
T ss_pred HhccCCCEEEEeCCC----CC-----chHHHHHHHHHhhCCCCcEEEEeCCC
Confidence 345678889998752 11 12234555666542 47899999876
No 340
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=28.45 E-value=74 Score=24.80 Aligned_cols=57 Identities=11% Similarity=-0.034 Sum_probs=35.4
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
.+.+.||+|+-++-. -+ ..--.-+.+..+++++. |.++.++.=+ ..+..+++..|+.
T Consensus 62 ~~~~~vvlDls~v~~-iD-ssgl~~L~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl~ 118 (143)
T 3llo_A 62 ENIHTVILDFTQVNF-MD-SVGVKTLAGIVKEYGDV-GIYVYLAGCS----------AQVVNDLTSNRFF 118 (143)
T ss_dssp -CCSEEEEECTTCCC-CC-HHHHHHHHHHHHHHHTT-TCEEEEESCC----------HHHHHHHHHTTTT
T ss_pred CCceEEEEECCCCcc-cc-HHHHHHHHHHHHHHHHC-CCEEEEEeCC----------HHHHHHHHhCCCe
Confidence 578999999988644 11 11112233455566775 8888887433 4677777877764
No 341
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=28.41 E-value=2.6e+02 Score=24.49 Aligned_cols=13 Identities=23% Similarity=0.391 Sum_probs=7.0
Q ss_pred HHHHHHcCCcEEE
Q 022336 175 WAELQRRGFKGVV 187 (299)
Q Consensus 175 ~~~Lk~~GIRaLV 187 (299)
++.+++.|++-|+
T Consensus 41 l~~l~~~~i~~Vv 53 (256)
T 3tqd_A 41 YESAIKSGAEEVV 53 (256)
T ss_dssp HHHHHHTTCSEEE
T ss_pred HHHHHhCCCCEEE
Confidence 3555555665544
No 342
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=28.40 E-value=2e+02 Score=21.92 Aligned_cols=73 Identities=15% Similarity=0.120 Sum_probs=43.6
Q ss_pred HcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVK 257 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~K 257 (299)
....=.+|+|.++. .-...+..|+..+.+.. +.+++||-|+..+... ......+..+.+.+|++++.-+.+
T Consensus 81 ~~d~~i~v~d~~~~-------~s~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~ 153 (181)
T 3tw8_B 81 GTHGVIVVYDVTSA-------ESFVNVKRWLHEINQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAK 153 (181)
T ss_dssp TCSEEEEEEETTCH-------HHHHHHHHHHHHHHHHCTTSEEEEEEECTTCGGGCCSCHHHHHHHHHHHTCCEEECBTT
T ss_pred cCCEEEEEEECCCH-------HHHHHHHHHHHHHHHhCCCCCEEEEEECCCCchhcccCHHHHHHHHHHcCCeEEEEECC
Confidence 33444556665542 22234556777776542 3688999999854321 123466778888889888776554
Q ss_pred CC
Q 022336 258 KP 259 (299)
Q Consensus 258 KP 259 (299)
..
T Consensus 154 ~~ 155 (181)
T 3tw8_B 154 EN 155 (181)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 343
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=28.30 E-value=1.8e+02 Score=21.38 Aligned_cols=43 Identities=21% Similarity=0.194 Sum_probs=28.9
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.++...+.+|++|. + ++ ....+.++.+++.. +.+++++|+..
T Consensus 42 ~~l~~~~~dlvi~d~---~--~~-----~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 42 TFLRREKIDLVFVDV---F--EG-----EESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHTTSCCSEEEEEC---T--TT-----HHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHhccCCCEEEEeC---C--CC-----CcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 445567889999996 2 11 23456777777653 36899999876
No 344
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=28.30 E-value=1.5e+02 Score=24.91 Aligned_cols=69 Identities=14% Similarity=0.094 Sum_probs=41.1
Q ss_pred cEEEEeccCeeecCCCcccCchHHHHHHHHHH---hCCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS---VFGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 184 RaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke---~fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
=.||+|+++.-. ...+.+|+..+.+ ..+.+++||-|+..+.. .....+..+.+++.++++++.-+.+..
T Consensus 115 ~ilVydvt~~~s-------f~~~~~~~~~l~~~~~~~~~piilVgNK~DL~~~r~v~~~e~~~~a~~~~~~~~e~SAk~g 187 (211)
T 2g3y_A 115 YLIVYSITDRAS-------FEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQ 187 (211)
T ss_dssp EEEEEETTCHHH-------HHHHHHHHHHHHTSGGGTTSCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEECBTTTT
T ss_pred EEEEEECCCHHH-------HHHHHHHHHHHHHHhCCCCCcEEEEEEChHHhcCceEeHHHHHHHHHHcCCEEEEEeCCCC
Confidence 468889876422 1234456655543 12689999999985431 112234556667778887776555443
No 345
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=28.24 E-value=3.6e+02 Score=24.98 Aligned_cols=92 Identities=11% Similarity=0.054 Sum_probs=60.8
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
..++.|-.++.||-.++=. .-.+.+.+..+-+..- ..++++--.. ...++.+++..++++|--..
T Consensus 67 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvls~~--~D~iviR~~~--------~~~~~~lA~~~~vPVINa~~ 131 (321)
T 1oth_A 67 GFALLGGHPCFLTTQDIHL-----GVNESLTDTARVLSSM--ADAVLARVYK--------QSDLDTLAKEASIPIINGLS 131 (321)
T ss_dssp HHHHTTCEEEEEETTTSCB-----TTTBCHHHHHHHHHHH--CSEEEEECSC--------HHHHHHHHHHCSSCEEESCC
T ss_pred HHHHcCCeEEEECCCcCcC-----CCCCCHHHHHHHHHHh--CCEEEEeCCC--------hhHHHHHHHhCCCCEEcCCC
Confidence 4456799999998655422 2235666666666663 3566655443 67788888888999986543
Q ss_pred CCCHH--H---HHHHHHHhC-CCCCcEEEEcCC
Q 022336 257 KKPAG--T---AEEIEKHFG-CQSSQLIMVDMC 283 (299)
Q Consensus 257 KKP~p--~---le~alk~lG-i~PeEiamVGDr 283 (299)
..-+| . +..+.+++| ++--.+++|||.
T Consensus 132 ~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~ 164 (321)
T 1oth_A 132 DLYHPIQILADYLTLQEHYSSLKGLTLSWIGDG 164 (321)
T ss_dssp SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCS
T ss_pred CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCc
Confidence 33444 2 556777887 455689999994
No 346
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=28.17 E-value=1.4e+02 Score=25.81 Aligned_cols=65 Identities=14% Similarity=0.025 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCC--c-EEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCC--CH----HHHHHHHHHhCCCCCc
Q 022336 206 LSSSIEQCKSVFGH--D-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKK--PA----GTAEEIEKHFGCQSSQ 276 (299)
Q Consensus 206 v~e~L~~Lke~fGi--k-VaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KK--P~----p~le~alk~lGi~PeE 276 (299)
....|+.+.+. ++ . ++|+||++ ...+..++++.||+++....++ -. ..+.+.++.+ +++=
T Consensus 15 ~~~~l~~l~~~-~~~~~i~~Vvs~~~--------~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~--~~Dl 83 (216)
T 2ywr_A 15 LQAIIDAIESG-KVNASIELVISDNP--------KAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKK--GVEL 83 (216)
T ss_dssp HHHHHHHHHTT-SSCEEEEEEEESCT--------TCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHT--TCCE
T ss_pred HHHHHHHHHhC-CCCCeEEEEEeCCC--------ChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhc--CCCE
Confidence 34556666664 54 4 68999986 3356778889999987532211 11 2234444544 4565
Q ss_pred EEEEc
Q 022336 277 LIMVD 281 (299)
Q Consensus 277 iamVG 281 (299)
++++|
T Consensus 84 iv~a~ 88 (216)
T 2ywr_A 84 VVLAG 88 (216)
T ss_dssp EEESS
T ss_pred EEEeC
Confidence 66665
No 347
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=28.14 E-value=1.5e+02 Score=25.32 Aligned_cols=84 Identities=13% Similarity=0.150 Sum_probs=45.7
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCH
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA 260 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~ 260 (299)
..+.+|++|+. . |+ -...+.++++++. +.+|+++|... ........-..|...+. .||.
T Consensus 47 ~~~dlvllD~~---m-P~-----~~G~~~~~~lr~~-~~pvi~lt~~~--------~~~~~~~a~~~Ga~dyl---~Kp~ 105 (259)
T 3luf_A 47 DEYVVALVDLT---L-PD-----APSGEAVKVLLER-GLPVVILTADI--------SEDKREAWLEAGVLDYV---MKDS 105 (259)
T ss_dssp TTEEEEEEESC---B-TT-----BTTSHHHHHHHHT-TCCEEEEECC---------CHHHHHHHHHTTCCEEE---ECSS
T ss_pred CCCcEEEEeCC---C-CC-----CCHHHHHHHHHhC-CCCEEEEEccC--------CHHHHHHHHHCCCcEEE---eCCc
Confidence 35667888863 1 22 1224567777775 89999999876 22222233456765432 2554
Q ss_pred H-HHHHHHH----HhCCCCCcEEEEcCCcc
Q 022336 261 G-TAEEIEK----HFGCQSSQLIMVDMCRI 285 (299)
Q Consensus 261 p-~le~alk----~lGi~PeEiamVGDrl~ 285 (299)
+ .+..+.. ...-..-.+++|.|...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~ILivDD~~~ 135 (259)
T 3luf_A 106 RHSLQYAVGLVHRLYLNQQIEVLVVDDSRT 135 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hhHHHHHHHhhhhHhhcCCCcEEEEeCCHH
Confidence 3 2222221 11224667999998754
No 348
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=28.06 E-value=60 Score=25.04 Aligned_cols=56 Identities=14% Similarity=0.072 Sum_probs=35.1
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
.+.+.||+|+-++-. - +..--.-+.+..+++++. |.++.++.=+ ..+..+++..|+
T Consensus 47 ~~~~~vvlDls~v~~-i-Dssgl~~L~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl 102 (130)
T 4dgh_A 47 ETPQILILRLKWVPF-M-DITGIQTLEEMIQSFHKR-GIKVLISGAN----------SRVSQKLVKAGI 102 (130)
T ss_dssp SCCSEEEEECTTCCC-C-CHHHHHHHHHHHHHHHTT-TCEEEEECCC----------HHHHHHHHHTTH
T ss_pred cCCCEEEEECCCCCc-c-cHHHHHHHHHHHHHHHHC-CCEEEEEcCC----------HHHHHHHHHcCC
Confidence 478999999988754 1 111122334455667776 8888877544 356666676665
No 349
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=27.90 E-value=2.1e+02 Score=23.97 Aligned_cols=92 Identities=9% Similarity=0.104 Sum_probs=54.1
Q ss_pred EEEEeccCeeecCCCc-ccC------chHHHHHHHHHHhC--CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEcc
Q 022336 185 GVVFDKDNTLTAPYSL-TLW------GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHR 255 (299)
Q Consensus 185 aLVlD~DNTLT~p~~~-~l~------Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha 255 (299)
.+|+ .||++..-... ... ..+.+.++.++... ..+|.|.|-... +.-.+++.+++..|+++....
T Consensus 128 t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~~~i~~~~i~ly~~~~C-----p~C~~a~~~L~~~~i~~~~~~ 201 (241)
T 1nm3_A 128 SMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAPQHQVQESISIFTKPGC-----PFCAKAKQLLHDKGLSFEEII 201 (241)
T ss_dssp EEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCTTSCCCCCEEEEECSSC-----HHHHHHHHHHHHHTCCCEEEE
T ss_pred EEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhhhhccccceEEEEECCCC-----hHHHHHHHHHHHcCCceEEEE
Confidence 4666 99998732211 111 45667777765421 245777776541 235688999999999764432
Q ss_pred C-CCCHHHHHHHHHHhCCCCCcEEEEcCCc
Q 022336 256 V-KKPAGTAEEIEKHFGCQSSQLIMVDMCR 284 (299)
Q Consensus 256 ~-KKP~p~le~alk~lGi~PeEiamVGDrl 284 (299)
. ..+. .+++.+..|..-=-+++|||..
T Consensus 202 i~~~~~--~~~l~~~~g~~~vP~~~~~g~~ 229 (241)
T 1nm3_A 202 LGHDAT--IVSVRAVSGRTTVPQVFIGGKH 229 (241)
T ss_dssp TTTTCC--HHHHHHHTCCSSSCEEEETTEE
T ss_pred CCCchH--HHHHHHHhCCCCcCEEEECCEE
Confidence 2 2232 2455666776544577888753
No 350
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=27.83 E-value=2.9e+02 Score=24.29 Aligned_cols=53 Identities=17% Similarity=0.191 Sum_probs=30.6
Q ss_pred HHHHHHcCCcEEEEeccCee-ecCCCccc--CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTL-TAPYSLTL--WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTL-T~p~~~~l--~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
++.|++.|+..|++|.+-.- .....+.. ..+...+.+.|.+. |. +|++++...
T Consensus 138 ~~~l~~~~iPvV~i~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~ 194 (348)
T 3bil_A 138 LEDLQKQGMPVVLVDRELPGDSTIPTATSNPQPGIAAAVELLAHN-NALPIGYLSGPM 194 (348)
T ss_dssp HHHHHHC-CCEEEESSCCSCC-CCCEEEEECHHHHHHHHHHHHHT-TCCSEEEECCCT
T ss_pred HHHHHhCCCCEEEEcccCCCCCCCCEEEeChHHHHHHHHHHHHHC-CCCeEEEEeCCC
Confidence 35677789999999864211 00001111 23455667777776 76 699998764
No 351
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=27.82 E-value=1.5e+02 Score=25.18 Aligned_cols=54 Identities=13% Similarity=0.100 Sum_probs=32.1
Q ss_pred HHHHHHcCCcEEEEeccCeeec--CCCccc----CchHHHHHHHHHHhCC--C-cEEEEeCCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTA--PYSLTL----WGPLSSSIEQCKSVFG--H-DIAVFSNSAG 229 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~--p~~~~l----~Pgv~e~L~~Lke~fG--i-kVaIVSNnaG 229 (299)
++.+++.||.+|++|.+-.-.. .....+ ......+.+.|.+. | . ++++++...+
T Consensus 79 ~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~-g~~~~~i~~i~g~~~ 141 (297)
T 3rot_A 79 LQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALEL-TPSAKRALVLNPQPG 141 (297)
T ss_dssp HHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHH-CTTCCEEEEEESCTT
T ss_pred HHHHHHCCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHh-cCCCceEEEEeCCCC
Confidence 3567788999999986643210 111111 22344556667776 5 4 6999987764
No 352
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=27.69 E-value=1.9e+02 Score=23.72 Aligned_cols=55 Identities=5% Similarity=0.010 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhC-CCcEEEEeCCCCCCC-------------CCccHHHHHHHHHHcCC-cEEEccCCCCH
Q 022336 206 LSSSIEQCKSVF-GHDIAVFSNSAGLYE-------------YDNDASKARKLEGKIGI-KVIRHRVKKPA 260 (299)
Q Consensus 206 v~e~L~~Lke~f-GikVaIVSNnaGs~~-------------~d~~~e~a~~~lk~LGI-~vI~ha~KKP~ 260 (299)
+..|+..+++.. +.+++||-|+..+.. .....+.+..+++.+|+ +++.-+.+.-.
T Consensus 118 ~~~~~~~i~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~e~SA~~g~ 187 (214)
T 3q3j_B 118 LKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSE 187 (214)
T ss_dssp HTHHHHHHHHHCTTSEEEEEEECGGGGGCHHHHHHHHHTTCCCCCHHHHHHHHHHHTCSEEEECCTTTCH
T ss_pred HHHHHHHHHHhCCCCCEEEEEEChhhccchhhhhhhcccccCccCHHHHHHHHHHcCCCEEEEeccCCCc
Confidence 345666665531 568999999985432 11335677888889998 77766665554
No 353
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=27.58 E-value=2.6e+02 Score=26.12 Aligned_cols=92 Identities=10% Similarity=0.084 Sum_probs=55.4
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCC
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVK 257 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~K 257 (299)
.++.|-.++.+.++.+. +..-.+.+.+..+-+.. + ..++++--.. ...++.+++..++|+|--...
T Consensus 66 ~~~LGg~~i~~~l~~~s----s~~kgEsl~DTarvls~-~-~D~iviR~~~--------~~~~~~lA~~~~vPVINag~~ 131 (328)
T 3grf_A 66 MTRLGGHAIYYELGANS----NVGGKETVQDTAEVFSR-M-VDICTARLAT--------KEMMREMAQHASVPCINALDD 131 (328)
T ss_dssp HHHHTCEEEEEEC--------------CHHHHHHHHTT-T-CSEEEEECSS--------HHHHHHHHHHCSSCEEESSCS
T ss_pred HHHCCCeEEccccCccc----cCCCCCCHHHHHHHHHh-h-CCEEEEecCC--------hhHHHHHHHhCCCCEEeCCCC
Confidence 35678898883333211 12223556666666544 2 4666665554 678888889999998865433
Q ss_pred CCHH--H---HHHHHHHhC--------CCCCcEEEEcCC
Q 022336 258 KPAG--T---AEEIEKHFG--------CQSSQLIMVDMC 283 (299)
Q Consensus 258 KP~p--~---le~alk~lG--------i~PeEiamVGDr 283 (299)
.-+| . +..+.+++| ++--.+++|||-
T Consensus 132 ~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 132 FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 3444 2 556777887 555679999996
No 354
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=27.42 E-value=2.1e+02 Score=22.00 Aligned_cols=56 Identities=9% Similarity=0.014 Sum_probs=35.3
Q ss_pred chHHHHHHHHHHh---CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSV---FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
+.+..|+.++.+. .+.+++||-|+..+.. .....+.++.+.+.+|++++.-+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~p~ilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 153 (181)
T 3t5g_A 94 EVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKEN 153 (181)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEEECTTCTTTCCSCHHHHHHHHHHTTCEEEECCTTSH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEEECccchhcceecHHHHHHHHHHhCCcEEEEecCCC
Confidence 3455565555332 2578999999985432 122456788888999998777665443
No 355
>3p3c_A UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; lipid A biosynthesis, lipid A synthesis, LPXC, BAAB sandwich hydrolase; HET: 3P3; 1.25A {Aquifex aeolicus} PDB: 1xxe_A* 2jt2_A* 1p42_A* 1yh8_A* 1yhc_A* 3p76_A* 2ies_A* 2ier_A* 2o3z_A* 2j65_A* 2go3_A* 2go4_A*
Probab=27.41 E-value=1.2e+02 Score=28.00 Aligned_cols=54 Identities=19% Similarity=0.328 Sum_probs=36.1
Q ss_pred CHHHHHHcCC-------cEEEEeccCeeecCCCcccCc-----hHHHHHHHHHHhCCCcEE--EEeCCCC
Q 022336 174 DWAELQRRGF-------KGVVFDKDNTLTAPYSLTLWG-----PLSSSIEQCKSVFGHDIA--VFSNSAG 229 (299)
Q Consensus 174 d~~~Lk~~GI-------RaLVlD~DNTLT~p~~~~l~P-----gv~e~L~~Lke~fGikVa--IVSNnaG 229 (299)
+.+.|+++|. .+||+|-|+.|. +....+.+ .+.+.+-.|.-. |.++. +++.++|
T Consensus 184 eve~L~~~GLa~GGsLdNAiV~~~~~vlN-~~gLR~~dE~vRHKiLD~IGDL~L~-G~pi~g~~~a~k~G 251 (274)
T 3p3c_A 184 EIEHIKKVGLGKGGSLKNTLVLGKDKVYN-PEGLRYENEPVRHKVFDLIGDLYLL-GSPVKGKFYSFRGG 251 (274)
T ss_dssp HHHHHHHTTCCTTCCTTTCEEECSSCBCS-TTCCSSTTHHHHHHHHHHHHHHGGG-SSCEECEEEEESCC
T ss_pred HHHHHHHCCcccccCcccEEEEcCCcccC-CCCCcCCCchhhHHHHHHHHHHHhc-CCCceEEEEEEcCc
Confidence 4578888875 789999999999 54444433 334566666554 76543 6777764
No 356
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=27.31 E-value=56 Score=27.98 Aligned_cols=77 Identities=9% Similarity=-0.078 Sum_probs=46.2
Q ss_pred CCcCCccccCCc------CCCCHHHHHHcCCcEEEEecc-CeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCC
Q 022336 159 HLALPHVTVPDI------RYIDWAELQRRGFKGVVFDKD-NTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY 231 (299)
Q Consensus 159 ~ll~P~~~v~sI------~~Id~~~Lk~~GIRaLVlD~D-NTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~ 231 (299)
.--.|++.+.+. ..++++.+. +| |.+|+++= +|-+ +.-..-.|.+.+..+++++. |+.|+.||-..
T Consensus 28 G~~aP~F~l~~~~~~G~~~~v~L~d~~-~G-k~vvl~F~patwC-p~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D~--- 100 (221)
T 2c0d_A 28 TKKAYNFTAQGLNKNNEIINVDLSSFI-GQ-KYCCLLFYPLNYT-FVCPTEIIEFNKHIKDFENK-NVELLGISVDS--- 100 (221)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGGGGT-TT-CEEEEEECCCCTT-TCCHHHHHHHHHTHHHHHHT-TEEEEEEESSC---
T ss_pred CCCCCCeEEeccccCCCccEEeHHHHc-CC-CeEEEEEEcCCCC-CchHHHHHHHHHHHHHHHHC-CCEEEEEeCCC---
Confidence 334788877776 235555541 24 56777765 5555 33333345555555666665 88888887643
Q ss_pred CCCccHHHHHHHHHHc
Q 022336 232 EYDNDASKARKLEGKI 247 (299)
Q Consensus 232 ~~d~~~e~a~~~lk~L 247 (299)
.+.++.+.+.+
T Consensus 101 -----~~~~~~~~~~~ 111 (221)
T 2c0d_A 101 -----VYSHLAWKNMP 111 (221)
T ss_dssp -----HHHHHHHHHSC
T ss_pred -----HHHHHHHHHHh
Confidence 45667777766
No 357
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=27.26 E-value=2.1e+02 Score=25.48 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=28.7
Q ss_pred HHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCC--cEEEEeCCC
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH--DIAVFSNSA 228 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGi--kVaIVSNna 228 (299)
.+.|++.|.| + -++..+.+++.+.++.+++. +. .+.|.||..
T Consensus 63 ~~~g~~~i~~------t-GGEPll~~~l~~li~~~~~~-~~~~~i~i~TNG~ 106 (340)
T 1tv8_A 63 AELGVKKIRI------T-GGEPLMRRDLDVLIAKLNQI-DGIEDIGLTTNGL 106 (340)
T ss_dssp HHTTCCEEEE------E-SSCGGGSTTHHHHHHHHTTC-TTCCEEEEEECST
T ss_pred HHCCCCEEEE------e-CCCccchhhHHHHHHHHHhC-CCCCeEEEEeCcc
Confidence 3457776654 4 36666677788888888775 44 788888865
No 358
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=27.24 E-value=33 Score=30.09 Aligned_cols=96 Identities=18% Similarity=0.148 Sum_probs=67.1
Q ss_pred eeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCC-CC----ccHH-HHHHHHHHcCCcEEEccCCCCHH-HHHH
Q 022336 193 TLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE-YD----NDAS-KARKLEGKIGIKVIRHRVKKPAG-TAEE 265 (299)
Q Consensus 193 TLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~-~d----~~~e-~a~~~lk~LGI~vI~ha~KKP~p-~le~ 265 (299)
++.......++|++.+.++.+++. |+ ++|+||...... .. .... ....+....+...+. ..||.+ .++.
T Consensus 148 v~~~~~~~~~~~~~~~~l~~l~~~-g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~--~~KP~~~~~~~ 223 (306)
T 2oyc_A 148 VLVGYDEHFSFAKLREACAHLRDP-EC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALV--VGKPSPYMFEC 223 (306)
T ss_dssp EEECCCTTCCHHHHHHHHHHHTST-TS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEE--CSTTSTHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHcC-CC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCcee--eCCCCHHHHHH
Confidence 344344556789999999999886 88 999999873221 00 0111 334444445555443 357766 4899
Q ss_pred HHHHhCCCCCcEEEEcCCc-ccccccce
Q 022336 266 IEKHFGCQSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 266 alk~lGi~PeEiamVGDrl-~DI~gAn~ 292 (299)
+++++|++|++++||||++ +||.+|+.
T Consensus 224 ~~~~lgi~~~e~l~vGD~~~~Di~~a~~ 251 (306)
T 2oyc_A 224 ITENFSIDPARTLMVGDRLETDILFGHR 251 (306)
T ss_dssp HHHHSCCCGGGEEEEESCTTTHHHHHHH
T ss_pred HHHHcCCChHHEEEECCCchHHHHHHHH
Confidence 9999999999999999997 99988764
No 359
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=27.24 E-value=62 Score=27.17 Aligned_cols=101 Identities=7% Similarity=0.020 Sum_probs=52.2
Q ss_pred HH-HHHHcCCcEEEEeccCeeecCCCccc--CchHHHHHHHHHHhCCC-cEEEEeCCCCCCCCCccHHHHHH---HHHHc
Q 022336 175 WA-ELQRRGFKGVVFDKDNTLTAPYSLTL--WGPLSSSIEQCKSVFGH-DIAVFSNSAGLYEYDNDASKARK---LEGKI 247 (299)
Q Consensus 175 ~~-~Lk~~GIRaLVlD~DNTLT~p~~~~l--~Pgv~e~L~~Lke~fGi-kVaIVSNnaGs~~~d~~~e~a~~---~lk~L 247 (299)
++ .|++.|+.+|++|.+-.-. ..+.. ......+.+.|.+. |. +|++++...+.. ....+.+- .+++.
T Consensus 78 ~~~~l~~~~iPvV~~~~~~~~~--~~V~~D~~~~g~~a~~~L~~~-G~~~i~~i~~~~~~~---~~~~R~~gf~~~l~~~ 151 (277)
T 3e61_A 78 IENTLTDHHIPFVFIDRINNEH--NGISTNHFKGGQLQAEVVRKG-KGKNVLIVHENLLID---AFHQRVQGIKYILDQQ 151 (277)
T ss_dssp HHHHHHHC-CCEEEGGGCC-----------HHHHHHHHHHHHHHT-TCCSEEEEESCTTSH---HHHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCCCEEEEeccCCCC--CeEEechHHHHHHHHHHHHHC-CCCeEEEEeCCCCCc---cHHHHHHHHHHHHHHc
Confidence 45 7888999999998764322 11111 22445566677776 76 699998765321 11223322 23334
Q ss_pred CCcEE--Ecc-------------CCCCH----------HHHHHHHHHhCCC-CCcEEEEc
Q 022336 248 GIKVI--RHR-------------VKKPA----------GTAEEIEKHFGCQ-SSQLIMVD 281 (299)
Q Consensus 248 GI~vI--~ha-------------~KKP~----------p~le~alk~lGi~-PeEiamVG 281 (299)
|+++. ... ..+|. .++.++++..|+. |+++.+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~vP~di~vig 211 (277)
T 3e61_A 152 RIDYKMLEATLLDNDKKFIDLIKELSIDSIICSNDLLAINVLGIVQRYHFKVPAEIQIIG 211 (277)
T ss_dssp --CEEEEEGGGGGSHHHHHHHHHHHTCCEEEESSHHHHHHHHHHHHHTTCCTTTTCEEEC
T ss_pred CCCccceecCCCCHHHHHHHhhcCCCCCEEEECCcHHHHHHHHHHHHcCCCCCCceEEEe
Confidence 55432 110 01221 1255778888887 78899988
No 360
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=27.00 E-value=2e+02 Score=24.25 Aligned_cols=19 Identities=16% Similarity=0.149 Sum_probs=12.4
Q ss_pred HHHHHHHhCCC-CCcEEEEc
Q 022336 263 AEEIEKHFGCQ-SSQLIMVD 281 (299)
Q Consensus 263 le~alk~lGi~-PeEiamVG 281 (299)
+.++++..|+. |+++.+||
T Consensus 199 ~~~al~~~g~~vP~di~vvg 218 (285)
T 3c3k_A 199 AIQALTESGLSIPQDVAVVG 218 (285)
T ss_dssp HHHHHHHTTCCTTTTCEEEC
T ss_pred HHHHHHHcCCCCCCceEEEE
Confidence 44566666765 67777776
No 361
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=26.90 E-value=1.4e+02 Score=24.11 Aligned_cols=72 Identities=14% Similarity=0.072 Sum_probs=40.5
Q ss_pred HcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEcc
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHR 255 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha 255 (299)
....=.+|+|+++.-+ ...+.+|+..+.+. .+.+++||.|+..+.. .....+..+.++..++.+++.-+
T Consensus 80 ~~~~~i~v~dv~~~~s-------~~~~~~~~~~l~~~~~~~~~piilV~NK~Dl~~~r~v~~~~~~~~a~~~~~~~~e~S 152 (192)
T 2cjw_A 80 VGDAYLIVYSITDRAS-------FEKASELRIQLRRARQTEDIPIILVGNKSDLVRXREVSVSEGRAXAVVFDXKFIETS 152 (192)
T ss_dssp HCSEEEEEEETTCHHH-------HHHHHHHHHHHHHHTTTSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEEECB
T ss_pred cCCEEEEEEECCCHHH-------HHHHHHHHHHHHHhhCCCCCeEEEEEechhhhccccccHHHHHHHHHHhCCceEEec
Confidence 3444578888876422 12344555544431 2688999999985431 01123445556667787776655
Q ss_pred CCC
Q 022336 256 VKK 258 (299)
Q Consensus 256 ~KK 258 (299)
.+.
T Consensus 153 A~~ 155 (192)
T 2cjw_A 153 AAV 155 (192)
T ss_dssp TTT
T ss_pred ccc
Confidence 443
No 362
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=26.74 E-value=1e+02 Score=26.29 Aligned_cols=78 Identities=18% Similarity=0.247 Sum_probs=44.0
Q ss_pred cCCccccCCcCCCC--HHHHHHcCCcEEEEe-ccCeeecCCCcccCchHHHHHHHHHHhCC--CcEEEEeCCCCCCCCCc
Q 022336 161 ALPHVTVPDIRYID--WAELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQCKSVFG--HDIAVFSNSAGLYEYDN 235 (299)
Q Consensus 161 l~P~~~v~sI~~Id--~~~Lk~~GIRaLVlD-~DNTLT~p~~~~l~Pgv~e~L~~Lke~fG--ikVaIVSNnaGs~~~d~ 235 (299)
+.|.+..-|+..+. .+.+.+.|.+.|-+| +||+.. +. ....++. ++++++... +.+.++.|++
T Consensus 9 i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv-~~-~~~~~~~---~~~lr~~~~~~~~v~lmv~d~------- 76 (228)
T 1h1y_A 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFV-PN-LTIGAPV---IQSLRKHTKAYLDCHLMVTNP------- 76 (228)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSS-SC-BCBCHHH---HHHHHTTCCSEEEEEEESSCG-------
T ss_pred EEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcC-cc-hhhCHHH---HHHHHhhcCCcEEEEEEecCH-------
Confidence 45555555544432 234556799998777 688877 33 2333444 444444322 3566888876
Q ss_pred cHHHHHHHHHHcCCcEE
Q 022336 236 DASKARKLEGKIGIKVI 252 (299)
Q Consensus 236 ~~e~a~~~lk~LGI~vI 252 (299)
.+.++.+.+ .|.+.+
T Consensus 77 -~~~i~~~~~-agad~v 91 (228)
T 1h1y_A 77 -SDYVEPLAK-AGASGF 91 (228)
T ss_dssp -GGGHHHHHH-HTCSEE
T ss_pred -HHHHHHHHH-cCCCEE
Confidence 344555555 677644
No 363
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=26.66 E-value=62 Score=26.21 Aligned_cols=74 Identities=9% Similarity=-0.011 Sum_probs=45.0
Q ss_pred CCccccCCc------CCCCHHHHHHcCCcEEEEecc-CeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCC
Q 022336 162 LPHVTVPDI------RYIDWAELQRRGFKGVVFDKD-NTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD 234 (299)
Q Consensus 162 ~P~~~v~sI------~~Id~~~Lk~~GIRaLVlD~D-NTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d 234 (299)
.|++.+.+. ..+++..+. +| |.+|++.= ++-+ +......+.+.+..+++++. |+.++.||...
T Consensus 6 aP~f~l~~~~~~G~~~~~~l~~~~-~g-k~vvl~F~~a~~C-~~C~~~~~~l~~~~~~~~~~-~v~vv~Is~d~------ 75 (192)
T 2h01_A 6 APSFKAEAVFGDNTFGEVSLSDFI-GK-KYVLLYFYPLDFT-FVCPSEIIALDKALDSFKER-NVELLGCSVDS------ 75 (192)
T ss_dssp CCCCEEEEECTTSCEEEEEGGGGT-TT-CEEEEEECSCSSC-SSCCHHHHHHHHTHHHHHHT-TEEEEEEESSC------
T ss_pred CCCcEeEeeecCCceeEEeHHHHc-CC-CeEEEEEECCCCC-CCCHHHHHHHHHHHHHHHHC-CCEEEEEEeCC------
Confidence 577776665 235555541 23 67888776 6655 33334445555666666665 78888888654
Q ss_pred ccHHHHHHHHHHc
Q 022336 235 NDASKARKLEGKI 247 (299)
Q Consensus 235 ~~~e~a~~~lk~L 247 (299)
.+..+.+.+.+
T Consensus 76 --~~~~~~~~~~~ 86 (192)
T 2h01_A 76 --KFTHLAWKKTP 86 (192)
T ss_dssp --HHHHHHHHTSC
T ss_pred --HHHHHHHHHhH
Confidence 45666666665
No 364
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=26.62 E-value=1.8e+02 Score=21.59 Aligned_cols=74 Identities=4% Similarity=0.003 Sum_probs=40.2
Q ss_pred HHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEEcCCc
Q 022336 209 SIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVDMCR 284 (299)
Q Consensus 209 ~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiamVGDrl 284 (299)
.++++.+ ..+|.|.|........=+.-.+++.+++.+|+++......+-....+++.+..|...==+++||+..
T Consensus 7 ~~~~~i~--~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ifi~g~~ 80 (109)
T 1wik_A 7 GLKVLTN--KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQLYVRGDL 80 (109)
T ss_dssp CHHHHHT--TSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHSCCSSCEEECSSSE
T ss_pred HHHHHhc--cCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhCCCCCCEEEECCEE
Confidence 3455444 3478888773100001123578999999999986544332221223344555665433367888764
No 365
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=26.61 E-value=44 Score=27.83 Aligned_cols=55 Identities=15% Similarity=0.305 Sum_probs=34.1
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHH
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA 240 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a 240 (299)
+.|++.|+..+ +-.+. +++ +.+.+.|+++.+. +..++|+|...|.+.+|...+.+
T Consensus 34 ~~l~~~G~~v~----~~~iv-~Dd----~~i~~al~~a~~~-~~DlVittGG~s~g~~D~t~eal 88 (164)
T 3pzy_A 34 EWLAQQGFSSA----QPEVV-ADG----SPVGEALRKAIDD-DVDVILTSGGTGIAPTDSTPDQT 88 (164)
T ss_dssp HHHHHTTCEEC----CCEEE-CSS----HHHHHHHHHHHHT-TCSEEEEESCCSSSTTCCHHHHH
T ss_pred HHHHHCCCEEE----EEEEe-CCH----HHHHHHHHHHHhC-CCCEEEECCCCCCCCCccHHHHH
Confidence 45667787642 22333 222 3456666666553 57999999999888766654443
No 366
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=26.60 E-value=1.9e+02 Score=21.12 Aligned_cols=75 Identities=13% Similarity=0.058 Sum_probs=42.6
Q ss_pred HHHHH-----cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH----h-CCCcEEEEeCCCCCCCCCccHHHHHHHHH
Q 022336 176 AELQR-----RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS----V-FGHDIAVFSNSAGLYEYDNDASKARKLEG 245 (299)
Q Consensus 176 ~~Lk~-----~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke----~-fGikVaIVSNnaGs~~~d~~~e~a~~~lk 245 (299)
+.+++ ..+.+|++|.+- ++ ....+.++++++ . ...+++++|.... ...+. ...
T Consensus 49 ~~l~~~~~~~~~~dlvi~D~~l----~~-----~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~-------~~~~~-~~~ 111 (146)
T 3ilh_A 49 NKLNELYAAGRWPSIICIDINM----PG-----INGWELIDLFKQHFQPMKNKSIVCLLSSSLD-------PRDQA-KAE 111 (146)
T ss_dssp HHHHHHHTSSCCCSEEEEESSC----SS-----SCHHHHHHHHHHHCGGGTTTCEEEEECSSCC-------HHHHH-HHH
T ss_pred HHHHHhhccCCCCCEEEEcCCC----CC-----CCHHHHHHHHHHhhhhccCCCeEEEEeCCCC-------hHHHH-HHH
Confidence 44555 779999999762 11 234566777766 2 2567888988761 23333 334
Q ss_pred HcC-CcEEEccCCCCHH--HHHHHHHHh
Q 022336 246 KIG-IKVIRHRVKKPAG--TAEEIEKHF 270 (299)
Q Consensus 246 ~LG-I~vI~ha~KKP~p--~le~alk~l 270 (299)
..| +..+. .||.. .+..+++..
T Consensus 112 ~~g~~~~~l---~KP~~~~~L~~~i~~~ 136 (146)
T 3ilh_A 112 ASDWVDYYV---SKPLTANALNNLYNKV 136 (146)
T ss_dssp HCSSCCEEE---CSSCCHHHHHHHHHHH
T ss_pred hcCCcceee---eCCCCHHHHHHHHHHH
Confidence 455 65443 35642 355555544
No 367
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=26.50 E-value=2.2e+02 Score=23.62 Aligned_cols=8 Identities=0% Similarity=-0.313 Sum_probs=3.8
Q ss_pred HHHHHcCC
Q 022336 176 AELQRRGF 183 (299)
Q Consensus 176 ~~Lk~~GI 183 (299)
+.+++.|+
T Consensus 35 ~~~~~~~~ 42 (245)
T 1h7e_A 35 ERALQVAG 42 (245)
T ss_dssp HHHHTCTT
T ss_pred HHHHhCCC
Confidence 44445553
No 368
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=26.49 E-value=2.1e+02 Score=21.68 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=36.0
Q ss_pred chHHHHHHHHHHh--CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSV--FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~--fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+++. .+.+++||-|+..+.. .....+.++.+.+.+|++++.-+.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 162 (179)
T 1z0f_A 104 NHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTG 162 (179)
T ss_dssp HTHHHHHHHHHHHSCTTCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCEEEECCTTTC
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEECcccccccccCHHHHHHHHHHcCCEEEEEeCCCC
Confidence 3455677666543 2578999999985431 122345777888888988777655443
No 369
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=26.17 E-value=2e+02 Score=21.25 Aligned_cols=44 Identities=7% Similarity=-0.044 Sum_probs=29.3
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- |+ ....+.++++++. ...+++++|...
T Consensus 42 ~~~~~~~~dlvl~D~~l----p~-----~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 42 QQIYKNLPDALICDVLL----PG-----IDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHSCCSEEEEESCC----SS-----SCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHhCCCCEEEEeCCC----CC-----CCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 45667788999999762 22 2345666776652 146899999876
No 370
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=25.99 E-value=1.5e+02 Score=24.58 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=35.8
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHH
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA 240 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a 240 (299)
+.|++.|+.++-. ++.+++. +.+.+.|+++.+..+..++|+|+..|.+.+|...+.+
T Consensus 35 ~~L~~~G~~v~~~----~iv~Dd~----~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~t~ea~ 91 (172)
T 1mkz_A 35 DSAQEAGHHVVDK----AIVKENR----YAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEAL 91 (172)
T ss_dssp HHHHHTTCEEEEE----EEECSCH----HHHHHHHHHHHHSSSCCEEEEESCCSSSTTCCHHHHH
T ss_pred HHHHHCCCeEeEE----EEeCCCH----HHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCCHHHHH
Confidence 4567788875432 3442222 4556677776653247899999999888766654433
No 371
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=25.97 E-value=1.4e+02 Score=26.25 Aligned_cols=68 Identities=9% Similarity=0.039 Sum_probs=42.9
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEc
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~h 254 (299)
+.+.+.|++||-++..+.= ... .-.+.....++.+.+. |..|.|-+... ....+..+++.+.+.++.+
T Consensus 112 ~~l~~~gv~Gi~l~~~~~~--~~~-~~~~~~~~~~~~a~~~-glpv~iH~~~~-------~l~~~~~~l~~~p~~~Vi~ 179 (294)
T 4i6k_A 112 VNLKAQGIVGVRLNLFGLN--LPA-LNTPDWQKFLRNVESL-NWQVELHAPPK-------YLVQLLPQLNEYSFDVVID 179 (294)
T ss_dssp HHHHTTTEEEEEEECTTSC--CCC-SSSHHHHHHHHHHHHT-TCEEEEECCHH-------HHHHHHHHHTTSSSCEEES
T ss_pred HHHHHCCCcEEEeccCCCC--CCC-cccHHHHHHHHHHHHc-CCEEEEeeCcc-------hHHHHHHHHHHCCCCEEEE
Confidence 4455679999998874310 011 1235667778888885 99999988654 1245566666677666654
No 372
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=25.92 E-value=64 Score=28.72 Aligned_cols=45 Identities=9% Similarity=0.110 Sum_probs=34.0
Q ss_pred CcccCchHHHHHHHHHHhC----------CCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcE
Q 022336 199 SLTLWGPLSSSIEQCKSVF----------GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 199 ~~~l~Pgv~e~L~~Lke~f----------GikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~v 251 (299)
...+.+...+.+.++..+. |+.++++|+.. ...+..+.+.+|++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~--------~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 41 GHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGEL--------TSEHETILKALELDY 95 (335)
T ss_dssp ESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCC--------CHHHHHHHHHHTCEE
T ss_pred CCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCc--------hHHHHHHHHHcCCCE
Confidence 3455677788888777433 78999999887 567888888998865
No 373
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=25.90 E-value=2.2e+02 Score=23.17 Aligned_cols=56 Identities=4% Similarity=0.042 Sum_probs=34.4
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+++.. +.+++||-|+..+.. .....+.+..+.+..+++++.-+.+..
T Consensus 102 ~~~~~~l~~i~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~~ 160 (223)
T 3cpj_B 102 ENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNS 160 (223)
T ss_dssp HHHHHHHHHHHHHCC--CEEEEEECCGGGGGGCCSCHHHHHHHHHHTTCEEEECCCC-C
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEECcccccccccCHHHHHHHHHHcCCEEEEEeCCCC
Confidence 34556777766532 578999999985431 112345677788888888776554443
No 374
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=25.71 E-value=60 Score=33.37 Aligned_cols=73 Identities=18% Similarity=0.292 Sum_probs=47.6
Q ss_pred CCHHHHHHcCCcEEEEec--cCeeecCCCccc--CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcC
Q 022336 173 IDWAELQRRGFKGVVFDK--DNTLTAPYSLTL--WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (299)
Q Consensus 173 Id~~~Lk~~GIRaLVlD~--DNTLT~p~~~~l--~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LG 248 (299)
|||++ +.|+..|++|- |+..- ..-..+ ..++.+..+..++. |++|.+=.|..| ++...+.+-...++.|
T Consensus 315 IDfAa--~~G~~yvlvD~gW~~~~~-~d~~~~~p~~di~~l~~Ya~~k-gV~i~lw~~~~~---~~~~~~~~~~~~~~~G 387 (641)
T 3a24_A 315 IDFAS--ANGIEYVILDEGWAVNLQ-ADLMQVVKEIDLKELVDYAASK-NVGIILWAGYHA---FERDMENVCRHYAEMG 387 (641)
T ss_dssp HHHHH--HTTCCEEEECTTSBCTTS-CCTTCBCTTCCHHHHHHHHHHT-TCEEEEEEEHHH---HHTSHHHHHHHHHHHT
T ss_pred HHHHH--HcCCCEEEEecccccCCC-CCccccCCcCCHHHHHHHHHhc-CCEEEEEeeCcc---hHHHHHHHHHHHHHcC
Confidence 45543 79999999975 22000 000122 34688888888887 999999999875 3334455666777788
Q ss_pred CcEE
Q 022336 249 IKVI 252 (299)
Q Consensus 249 I~vI 252 (299)
|..+
T Consensus 388 v~gv 391 (641)
T 3a24_A 388 VKGF 391 (641)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 8654
No 375
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=25.64 E-value=2.1e+02 Score=21.36 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=33.7
Q ss_pred HcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH--h-CCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEE
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS--V-FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke--~-fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI 252 (299)
...+.+|++|.+= ++ ....+.++++++ . .+.+++++|... .......+...|+..+
T Consensus 57 ~~~~dliilD~~l----~~-----~~g~~~~~~lr~~~~~~~~pii~~t~~~--------~~~~~~~~~~~g~~~~ 115 (152)
T 3heb_A 57 AGRAQLVLLDLNL----PD-----MTGIDILKLVKENPHTRRSPVVILTTTD--------DQREIQRCYDLGANVY 115 (152)
T ss_dssp TTCBEEEEECSBC----SS-----SBHHHHHHHHHHSTTTTTSCEEEEESCC--------CHHHHHHHHHTTCSEE
T ss_pred cCCCCEEEEeCCC----CC-----CcHHHHHHHHHhcccccCCCEEEEecCC--------CHHHHHHHHHCCCcEE
Confidence 4567889998752 11 334667777776 2 146899999876 2222233345677544
No 376
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=25.60 E-value=1.4e+02 Score=22.33 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=23.1
Q ss_pred HHHHH-cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQR-RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~-~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.++. ..+.+|++|.+- ++ ....+.++++++.. +.+++++|+..
T Consensus 43 ~~l~~~~~~dlvi~d~~l----~~-----~~g~~~~~~l~~~~~~~~ii~ls~~~ 88 (154)
T 2qsj_A 43 AFLEADNTVDLILLDVNL----PD-----AEAIDGLVRLKRFDPSNAVALISGET 88 (154)
T ss_dssp HHHHTTCCCSEEEECC---------------CHHHHHHHHHHCTTSEEEEC----
T ss_pred HHHhccCCCCEEEEeCCC----CC-----CchHHHHHHHHHhCCCCeEEEEeCCC
Confidence 34555 678999999862 11 12245566666542 46899998875
No 377
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=25.54 E-value=1.4e+02 Score=23.95 Aligned_cols=25 Identities=16% Similarity=0.117 Sum_probs=21.7
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
.+++.+.++.+++. |.+++.+|++.
T Consensus 92 t~~~~~~~~~ak~~-g~~vi~IT~~~ 116 (186)
T 1m3s_A 92 TKSLIHTAAKAKSL-HGIVAALTINP 116 (186)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEESCT
T ss_pred cHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 46788899999997 99999999986
No 378
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=25.49 E-value=1.6e+02 Score=23.66 Aligned_cols=26 Identities=8% Similarity=0.079 Sum_probs=22.0
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAG 229 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaG 229 (299)
.+++.+.++.+++. |.+++.+|++.+
T Consensus 100 t~~~~~~~~~ak~~-g~~vi~IT~~~~ 125 (187)
T 3sho_A 100 LRDTVAALAGAAER-GVPTMALTDSSV 125 (187)
T ss_dssp CHHHHHHHHHHHHT-TCCEEEEESCTT
T ss_pred CHHHHHHHHHHHHC-CCCEEEEeCCCC
Confidence 46788888999987 999999999874
No 379
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=25.39 E-value=2.1e+02 Score=21.28 Aligned_cols=59 Identities=8% Similarity=0.022 Sum_probs=29.3
Q ss_pred cEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHh-CCCCCcEEEEcCC
Q 022336 220 DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHF-GCQSSQLIMVDMC 283 (299)
Q Consensus 220 kVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~l-Gi~PeEiamVGDr 283 (299)
+|.|.|-... +.-.+++.+++..||+|......+-....+.+.+.. |..-==+++|||.
T Consensus 5 ~I~vYs~~~C-----p~C~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~Dg 64 (92)
T 2lqo_A 5 ALTIYTTSWC-----GYCLRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFADG 64 (92)
T ss_dssp CEEEEECTTC-----SSHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETTS
T ss_pred cEEEEcCCCC-----HhHHHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeCC
Confidence 4556665432 224677777777777765433222111233333332 4433346677774
No 380
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=25.15 E-value=1.9e+02 Score=26.65 Aligned_cols=92 Identities=13% Similarity=0.202 Sum_probs=56.6
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHH-HHHHcCCcEEEcc
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARK-LEGKIGIKVIRHR 255 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~-~lk~LGI~vI~ha 255 (299)
..++.|-.++.||-+.+=. .-.+.+.+..+-+.. ++..++++-... ...++. +++..+++++--+
T Consensus 55 A~~~LGg~~i~l~~~~ss~-----~kgEsl~DTarvls~-~~~D~iviR~~~--------~~~~~~~la~~~~vPVINAG 120 (291)
T 3d6n_B 55 AARELGIETYLVSGSESST-----VKGESFFDTLKTFEG-LGFDYVVFRVPF--------VFFPYKEIVKSLNLRLVNAG 120 (291)
T ss_dssp HHHHTTCEEEEEETTTTSC-----CTTCCHHHHHHHHHH-TTCSEEEEEESS--------CCCSCHHHHHTCSSEEEEEE
T ss_pred HHHHhCCeEEEECCccCcc-----cCCCcHHHHHHHHHH-hcCCEEEEEcCC--------hHHHHHHHHHhCCCCEEeCc
Confidence 3456788999998655322 223566777777666 465555444332 223555 6677789988622
Q ss_pred -CCCCHH--H---HHHHHHHhC-CCCCcEEEEcC
Q 022336 256 -VKKPAG--T---AEEIEKHFG-CQSSQLIMVDM 282 (299)
Q Consensus 256 -~KKP~p--~---le~alk~lG-i~PeEiamVGD 282 (299)
...-+| . +..+.+++| ++--.+++|||
T Consensus 121 ~g~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD 154 (291)
T 3d6n_B 121 DGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGD 154 (291)
T ss_dssp ETTTBCHHHHHHHHHHHHHHHSCCTTCEEEEESC
T ss_pred cCCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECC
Confidence 223334 2 556777887 46677999999
No 381
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=25.11 E-value=1.2e+02 Score=24.59 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHh---CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 205 PLSSSIEQCKSV---FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 205 gv~e~L~~Lke~---fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
.+..|+..+.+. .+.+++||=|+..+.. .....+.++.+.+.+|++++.-+.+..
T Consensus 125 ~~~~~l~~i~~~~~~~~~piilV~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~g 183 (217)
T 2f7s_A 125 NVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATG 183 (217)
T ss_dssp HHHHHHHTCCCCCTTTCCEEEEEEECTTCGGGCCSCHHHHHHHHHHTTCCEEEEBTTTT
T ss_pred HHHHHHHHHHHhcCcCCCCEEEEEECCccccccccCHHHHHHHHHHCCCcEEEEECCCC
Confidence 445566655431 1578999999985432 122346778888888988776554443
No 382
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=24.87 E-value=2.3e+02 Score=21.55 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=39.9
Q ss_pred CcEEEEeccCeeecCCCcccCchHHHHHHHHHHh------CCCcEEEEeCCCCCCCCCccHHHHHHHHH-HcCCcEEEcc
Q 022336 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV------FGHDIAVFSNSAGLYEYDNDASKARKLEG-KIGIKVIRHR 255 (299)
Q Consensus 183 IRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~------fGikVaIVSNnaGs~~~d~~~e~a~~~lk-~LGI~vI~ha 255 (299)
.-.+++|.++--. ...+..|+..+... .+.+++||=|+..+.......+.+..+.+ ..+++++.-+
T Consensus 82 ~~i~v~d~~~~~s-------~~~~~~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~S 154 (177)
T 1wms_A 82 CCLLTFSVDDSQS-------FQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETS 154 (177)
T ss_dssp EEEEEEETTCHHH-------HHTHHHHHHHHHHHHTCSCTTTSCEEEEEECTTCSSCSSCHHHHHHHHHHTTCCCEEECC
T ss_pred EEEEEEECcCHHH-------HHHHHHHHHHHHHHccccccCCCcEEEEEECCcccccccCHHHHHHHHHhcCCceEEEEe
Confidence 3456666654221 23345566655431 26789999999855322234556677766 4567777665
Q ss_pred CCCC
Q 022336 256 VKKP 259 (299)
Q Consensus 256 ~KKP 259 (299)
.+..
T Consensus 155 a~~~ 158 (177)
T 1wms_A 155 AKDA 158 (177)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 5444
No 383
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=24.83 E-value=84 Score=25.59 Aligned_cols=93 Identities=18% Similarity=0.230 Sum_probs=52.7
Q ss_pred cCCccccCCcC-----CCCHHHHHHcCCcEEEEecc-CeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCC
Q 022336 161 ALPHVTVPDIR-----YIDWAELQRRGFKGVVFDKD-NTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD 234 (299)
Q Consensus 161 l~P~~~v~sI~-----~Id~~~Lk~~GIRaLVlD~D-NTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d 234 (299)
-.|++.+.+.. .++++.+ +| |.+|+.+= +|-+ +.-..-.+.+.+..+++++. |+.|+-||-..
T Consensus 6 ~aP~f~l~~~~~G~~~~v~l~~~--~G-k~vvl~F~~~~~C-p~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d~------ 74 (186)
T 1n8j_A 6 KIKPFKNQAFKNGEFIEVTEKDT--EG-RWSVFFFYPADFT-FVSPTELGDVADHYEELQKL-GVDVYSVSTDT------ 74 (186)
T ss_dssp BCCCCEEEEEETTEEEEEEHHHH--TT-SEEEEEECSCTTC-SHHHHHHHHHHHHHHHHHHT-TEEEEEEESSC------
T ss_pred cCCCcEeecccCCcceEEEHHHH--CC-CeEEEEEECCCCC-CccHHHHHHHHHHHHHHHHC-CCEEEEEECCC------
Confidence 36777777662 4667776 35 66776652 2333 21122234455555666665 88888887654
Q ss_pred ccHHHHHHHHHHc----CCc--EEEccCCCCHHHHHHHHHHhCCC
Q 022336 235 NDASKARKLEGKI----GIK--VIRHRVKKPAGTAEEIEKHFGCQ 273 (299)
Q Consensus 235 ~~~e~a~~~lk~L----GI~--vI~ha~KKP~p~le~alk~lGi~ 273 (299)
.+.++.+.+.+ ++. ++.. +.. ++.+.+|+.
T Consensus 75 --~~~~~~~~~~~~~~~~~~fp~l~D----~~~---~~~~~ygv~ 110 (186)
T 1n8j_A 75 --HFTHKAWHSSSETIAKIKYAMIGD----PTG---ALTRNFDNM 110 (186)
T ss_dssp --HHHHHHHHHHCTTGGGCCSEEEEC----TTS---HHHHHTTCE
T ss_pred --HHHHHHHHHHcCcccCCceeEEEC----Cch---HHHHHhCCc
Confidence 45667777777 553 3332 211 355778874
No 384
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.70 E-value=2.2e+02 Score=24.76 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=30.8
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcc--cCchHHHHHHHHHHhCCC-cEEEEeCCCC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLT--LWGPLSSSIEQCKSVFGH-DIAVFSNSAG 229 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~--l~Pgv~e~L~~Lke~fGi-kVaIVSNnaG 229 (299)
.+++.|+.+|++|.+-.-....... -..+...+.+.|.+. |. +|++++...+
T Consensus 138 ~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~~ 192 (338)
T 3dbi_A 138 IIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINA-GHQEIAFLTGSMD 192 (338)
T ss_dssp HHHHCSSCEEEESSCCSSSGGGEECBCHHHHHHHHHHHHHHT-TCCSEEEECCCTT
T ss_pred HHHcCCCCEEEEcCCCCCCCCCEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCCCC
Confidence 3456789999998653211000111 123455667778776 76 6999987653
No 385
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=24.70 E-value=74 Score=24.80 Aligned_cols=56 Identities=14% Similarity=0.068 Sum_probs=35.0
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI 249 (299)
.+.+.||+|+-++-.-+ ..--.-+.+..+++++. |.++.++.=+ ..+..+++..|+
T Consensus 50 ~~~~~vvlDls~v~~iD--ssgl~~L~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl 105 (135)
T 4dgf_A 50 ETPKVFILRMRRVPVID--ATGMHALWEFQESCEKR-GTILLLSGVS----------DRLYGALNRFGF 105 (135)
T ss_dssp SCCSEEEEECTTCSCBC--HHHHHHHHHHHHHHHHH-TCEEEEESCC----------HHHHHHHHHHTH
T ss_pred CCCcEEEEEcCCCCccC--HHHHHHHHHHHHHHHHC-CCEEEEEcCC----------HHHHHHHHHcCC
Confidence 47899999998875411 11112334555667776 8888887544 356666666665
No 386
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=24.66 E-value=1.8e+02 Score=20.35 Aligned_cols=44 Identities=9% Similarity=-0.007 Sum_probs=28.5
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++..+.+++++|...
T Consensus 39 ~~~~~~~~dlvl~D~~l----~~-----~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 39 EQFEAEQPDIIILDLML----PE-----IDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHHCCSEEEECSSC----SS-----SCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHHhCCCCEEEEeccC----CC-----CCHHHHHHHHHhCCCCCEEEEecCC
Confidence 34556778999998753 11 1234556666554467899999876
No 387
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=24.65 E-value=2.5e+02 Score=21.98 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=43.5
Q ss_pred HHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC---CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEc
Q 022336 179 QRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF---GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRH 254 (299)
Q Consensus 179 k~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f---GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~h 254 (299)
+....=.+|+|.++.- -...+..|+..+.+.. +.+++||=|+..+... ....+.+..+.+.+|++++.-
T Consensus 84 ~~~~~~i~v~d~~~~~-------s~~~~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (206)
T 2bov_A 84 RSGEGFLCVFSITEME-------SFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVET 156 (206)
T ss_dssp HHCSEEEEEEETTCHH-------HHHHHHHHHHHHHHHTTCSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHHTCEEEEE
T ss_pred hhCCEEEEEEECCCHH-------HHHHHHHHHHHHHHhcCCCCCCEEEEEeccCccccccccHHHHHHHHHHhCCeEEEE
Confidence 3344445666766421 1234556666665432 6789999999854321 123456777888888877765
Q ss_pred cCCCC
Q 022336 255 RVKKP 259 (299)
Q Consensus 255 a~KKP 259 (299)
+.+..
T Consensus 157 Sa~~g 161 (206)
T 2bov_A 157 SAKTR 161 (206)
T ss_dssp CTTTC
T ss_pred eCCCC
Confidence 54443
No 388
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=24.55 E-value=2.7e+02 Score=22.88 Aligned_cols=53 Identities=25% Similarity=0.367 Sum_probs=38.1
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCC
Q 022336 208 SSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGC 272 (299)
Q Consensus 208 e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi 272 (299)
+.++++.+. |..|+|+.-+- .+.+..++.+.||.+++.. ++ ..++.+++..|.
T Consensus 63 ~~v~kI~~~-g~nVVl~~k~I--------~d~a~~~l~k~gI~~v~~v-~~--~dleria~atGa 115 (159)
T 1ass_A 63 QMVEKIKKS-GANVVLCQKGI--------DDVAQHYLAKEGIYAVRRV-KK--SDMEKLAKATGA 115 (159)
T ss_dssp HHHHHHHHT-TCSEEEESSCB--------CHHHHHHHHHTTCEEECSC-CH--HHHHHHHHHHTC
T ss_pred HHhhhhhhC-CCeEEEECCcc--------CHHHHHHHHHCCCEEEccC-CH--HHHHHHHHHhCC
Confidence 344556665 99988887766 5778888888999877653 22 357888888875
No 389
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=24.41 E-value=2.6e+02 Score=21.91 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+.+.. +.+++||-|+..+... ....+.++.+.+..|++++.-+.+..
T Consensus 114 ~~~~~~l~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~ 172 (193)
T 2oil_A 114 AVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDS 172 (193)
T ss_dssp HTHHHHHHHHHTTSCTTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEEEECTTTC
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEEECCCcccccccCHHHHHHHHHHcCCEEEEEeCCCC
Confidence 34556777766432 5789999999854321 12345677788888887776555444
No 390
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=24.26 E-value=36 Score=26.03 Aligned_cols=57 Identities=16% Similarity=0.006 Sum_probs=34.8
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH-hCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS-VFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke-~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
.+.+.|++|+.++=.- +. .--.-+....+++++ . |.++.++.-+ +.+..+.+..|+.
T Consensus 46 ~~~~~vvlDls~v~~i-DS-sGl~~L~~~~~~~~~~~-g~~l~l~~~~----------~~v~~~l~~~gl~ 103 (121)
T 3t6o_A 46 AQPRKVLIDLEGVEFF-GS-SFIELLVRGWKRIKEDQ-QGVFALCSVS----------PYCVEVLQVTHID 103 (121)
T ss_dssp SSSCEEEEECTTCCEE-CH-HHHHHHHHHHHHHTTST-TCEEEEESCC----------HHHHHHHTTCSGG
T ss_pred cCCCeEEEECCCCCEE-cH-HHHHHHHHHHHHHHHhc-CCEEEEEeCC----------HHHHHHHHHhCcc
Confidence 5789999999987441 11 011112233445555 5 7888877543 4677888887764
No 391
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=24.22 E-value=82 Score=25.39 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=25.1
Q ss_pred cCCCCcCCccccCC-cCCCCHHHHHHcCCcEEEEecc
Q 022336 156 KDRHLALPHVTVPD-IRYIDWAELQRRGFKGVVFDKD 191 (299)
Q Consensus 156 ~~p~ll~P~~~v~s-I~~Id~~~Lk~~GIRaLVlD~D 191 (299)
.+.+.+-|++++.. +..-+...|.+.|+++||.+.+
T Consensus 13 ~n~~~V~~~l~~s~~p~~a~a~~La~~Ga~vvi~~r~ 49 (157)
T 3gxh_A 13 RALQQQAPQLLSSGLPNEQQFSLLKQAGVDVVINLMP 49 (157)
T ss_dssp TTCEEEETTEEEEBCCCHHHHHHHHHTTCCEEEECSC
T ss_pred cChheecCceeEcCCCCHHHHHHHHHcCCCEEEECCC
Confidence 45666778887754 3334457888999999886553
No 392
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=24.16 E-value=1.5e+02 Score=25.84 Aligned_cols=43 Identities=12% Similarity=0.052 Sum_probs=26.8
Q ss_pred HHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCC-CCcEEEEc
Q 022336 238 SKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQ-SSQLIMVD 281 (299)
Q Consensus 238 e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~-PeEiamVG 281 (299)
+.++.+++. .+..++-..---..++.++++..|+. |+++.+||
T Consensus 230 ~~~~~ll~~-~~~ai~~~~d~~A~g~~~al~~~G~~vP~disvig 273 (332)
T 2o20_A 230 ALAERLLER-GATSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIIS 273 (332)
T ss_dssp HHHHHHHHT-TCCEEEESCHHHHHHHHHHHHHTTCCTTTTCEEEE
T ss_pred HHHHHHhcc-CCCEEEECChHHHHHHHHHHHHcCCCCccCEEEEE
Confidence 344555555 66655532111112567888999997 89999998
No 393
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=24.12 E-value=3.1e+02 Score=22.88 Aligned_cols=22 Identities=5% Similarity=0.019 Sum_probs=17.8
Q ss_pred HHHHHHHHhCCC-CCcEEEEcCC
Q 022336 262 TAEEIEKHFGCQ-SSQLIMVDMC 283 (299)
Q Consensus 262 ~le~alk~lGi~-PeEiamVGDr 283 (299)
++.++++..|+. |+++.+||=+
T Consensus 202 g~~~al~~~g~~vP~di~vig~d 224 (289)
T 3g85_A 202 GVISVLNKRQISIPDDIEIVAIG 224 (289)
T ss_dssp HHHHHHHHTTCCTTTTCEEEEEE
T ss_pred HHHHHHHHcCCCCCCceEEEEeC
Confidence 467889999987 7899998843
No 394
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=24.01 E-value=2.3e+02 Score=21.21 Aligned_cols=77 Identities=18% Similarity=0.137 Sum_probs=44.9
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh-CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEE
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV-FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIR 253 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~-fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ 253 (299)
..++....=.+++|.++-- -...+..|+..+.+. .+.+++||=|+..+... ....+.++.+.+.+|++++.
T Consensus 73 ~~~~~~d~~i~v~d~~~~~-------s~~~~~~~~~~i~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 145 (168)
T 1z2a_A 73 AYYRGAQACVLVFSTTDRE-------SFEAISSWREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYR 145 (168)
T ss_dssp HHHTTCCEEEEEEETTCHH-------HHHTHHHHHHHHHHHHCSCCEEEEEECGGGGGGCSSCHHHHHHHHHHHTCEEEE
T ss_pred HHhcCCCEEEEEEECcCHH-------HHHHHHHHHHHHHHhCCCCCEEEEEECcccCcccccCHHHHHHHHHHcCCeEEE
Confidence 3444444445666665421 123455666665542 26789999999844311 12345677788888988776
Q ss_pred ccCCCC
Q 022336 254 HRVKKP 259 (299)
Q Consensus 254 ha~KKP 259 (299)
-+.+..
T Consensus 146 ~Sa~~~ 151 (168)
T 1z2a_A 146 TSVKED 151 (168)
T ss_dssp CBTTTT
T ss_pred EecCCC
Confidence 655443
No 395
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=23.87 E-value=2.1e+02 Score=20.68 Aligned_cols=60 Identities=10% Similarity=0.068 Sum_probs=36.5
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEE
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI 252 (299)
+.++...+..|++|..- |+ ....+.++++++. .+.+++++|... ...........|...+
T Consensus 40 ~~l~~~~~dlvllD~~~----p~-----~~g~~~~~~l~~~~~~~~~pii~~s~~~--------~~~~~~~~~~~Ga~~~ 102 (122)
T 3gl9_A 40 EKLSEFTPDLIVLXIMM----PV-----MDGFTVLKKLQEKEEWKRIPVIVLTAKG--------GEEDESLALSLGARKV 102 (122)
T ss_dssp HHHTTBCCSEEEECSCC----SS-----SCHHHHHHHHHTSTTTTTSCEEEEESCC--------SHHHHHHHHHTTCSEE
T ss_pred HHHHhcCCCEEEEeccC----CC-----CcHHHHHHHHHhcccccCCCEEEEecCC--------chHHHHHHHhcChhhh
Confidence 44556778899998751 22 2345667777653 146899999876 2333333446777544
No 396
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=23.84 E-value=2.2e+02 Score=20.89 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=27.0
Q ss_pred HcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 180 ~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
...+.+|++|.+- ++ ....+.++++++.. +.+++++|...
T Consensus 47 ~~~~dlvi~d~~l----~~-----~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 47 CNSIDVVITDMKM----PK-----LSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTTCCEEEEESCC----SS-----SCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCCEEEEeCCC----CC-----CcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4578999999862 11 23456677776642 46899999876
No 397
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=23.68 E-value=2.3e+02 Score=21.19 Aligned_cols=44 Identities=9% Similarity=0.072 Sum_probs=30.0
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.+++..+.+|++|.+- ++ ....+.++++++.. ..+++++|...
T Consensus 52 ~~l~~~~~dlvi~D~~l----~~-----~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 52 QLLASREVDLVISAAHL----PQ-----MDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHSCCSEEEEESCC----SS-----SCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHcCCCCEEEEeCCC----Cc-----CcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 45667889999999873 11 23456666766642 46899999876
No 398
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=23.59 E-value=3.1e+02 Score=25.92 Aligned_cols=67 Identities=18% Similarity=0.135 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCCCC-------------ccHHHHHHHHHHcCCcEEEccCCCCHH------HHHHHH
Q 022336 207 SSSIEQCKSVFGHDIAVFSNSAGLYEYD-------------NDASKARKLEGKIGIKVIRHRVKKPAG------TAEEIE 267 (299)
Q Consensus 207 ~e~L~~Lke~fGikVaIVSNnaGs~~~d-------------~~~e~a~~~lk~LGI~vI~ha~KKP~p------~le~al 267 (299)
.+.|+++.+.+|+++..++-.....+.. .....++.+++++|++++... -|-+ -+.++.
T Consensus 210 ~~ei~~lL~~~Gi~v~~~~~~~~~~el~~~~~A~~ni~~~~~~~~~A~~Le~~~giP~~~~~--~P~G~~~T~~~Lr~ia 287 (460)
T 2xdq_A 210 VTQLTLELKKQGIKVSGWLPAKRYTELPVIDEGYYVAGVNPFLSRTATTLIRRRKCQLITAP--FPIGPDGTRTWIEQIC 287 (460)
T ss_dssp HHHHHHHHGGGTCCEEEEESCSSGGGCCCCCTTCEEEESSTTCHHHHHHHHHTTCCEEECCC--CSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEeCCCCHHHHHccccCcEEEEcCHhHHHHHHHHHHHcCCCceecC--cCccHHHHHHHHHHHH
Confidence 3456666666799888777664332111 113567778888999887532 1332 166777
Q ss_pred HHhCCCCC
Q 022336 268 KHFGCQSS 275 (299)
Q Consensus 268 k~lGi~Pe 275 (299)
+.+|.+++
T Consensus 288 ~~~g~~~e 295 (460)
T 2xdq_A 288 ATFGIQPQ 295 (460)
T ss_dssp HHTTCCCC
T ss_pred HHHCcCHH
Confidence 78887765
No 399
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=23.51 E-value=99 Score=32.87 Aligned_cols=81 Identities=12% Similarity=0.090 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHhcCCCCcCCccccC----CcCCCCH-------HHHHHcCC--cEEEEeccC-----eeecCCCcccCc
Q 022336 143 NVEGIVSSTVVFAKDRHLALPHVTVP----DIRYIDW-------AELQRRGF--KGVVFDKDN-----TLTAPYSLTLWG 204 (299)
Q Consensus 143 N~~gi~~~~~~~~~~p~ll~P~~~v~----sI~~Id~-------~~Lk~~GI--RaLVlD~DN-----TLT~p~~~~l~P 204 (299)
+...+..-...|.-.| .+.|.+.+. .-..-+. +.+++.|| .++++|.|= ..| ++ ..-.|
T Consensus 297 tp~~Vi~~Y~~LtG~p-~lpP~WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt-~D-~~~FP 373 (898)
T 3lpp_A 297 TPEQVVQQYQQLVGLP-AMPAYWNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFT-YD-QVAFN 373 (898)
T ss_dssp SHHHHHHHHHHHHCCC-CCCCGGGGSCEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTC-CC-TTTTT
T ss_pred CHHHHHHHHHHHhCCC-CcCcchhcCcceecccCCCHHHHHHHHHHHHHcCCCceeeEeccccccCCCcce-EC-hhhCC
Confidence 5667777777677666 478888774 2233343 34567888 999999883 333 22 23456
Q ss_pred hHHHHHHHHHHhCCCcEEEEeCC
Q 022336 205 PLSSSIEQCKSVFGHDIAVFSNS 227 (299)
Q Consensus 205 gv~e~L~~Lke~fGikVaIVSNn 227 (299)
+..+++++|++. |+++++.-+-
T Consensus 374 dp~~mv~~Lh~~-G~k~vl~idP 395 (898)
T 3lpp_A 374 GLPQFVQDLHDH-GQKYVIILDP 395 (898)
T ss_dssp THHHHHHHHHHT-TCEEEEEECS
T ss_pred CHHHHHHHHHHC-CCEEEEEeCC
Confidence 888999999997 9998876554
No 400
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=23.48 E-value=2.1e+02 Score=20.52 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=27.9
Q ss_pred HHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhC--CCCCcEEEEcCCc
Q 022336 238 SKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFG--CQSSQLIMVDMCR 284 (299)
Q Consensus 238 e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lG--i~PeEiamVGDrl 284 (299)
.+|+.+++..|+++.......-....+++.+..| ...==.++|||..
T Consensus 22 ~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~g~~ 70 (93)
T 1t1v_A 22 SEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNGNHY 70 (93)
T ss_dssp HHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEETTEE
T ss_pred HHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEECCEE
Confidence 6889999999997654332222122344555667 3233377888864
No 401
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=23.44 E-value=1.3e+02 Score=22.35 Aligned_cols=105 Identities=9% Similarity=-0.002 Sum_probs=61.2
Q ss_pred CCcCCccccCCcCC--CCHHHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCcc
Q 022336 159 HLALPHVTVPDIRY--IDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDND 236 (299)
Q Consensus 159 ~ll~P~~~v~sI~~--Id~~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~ 236 (299)
.--.|++.+.++.. +++..+ .| |.+++++=++-. +......|.+.+..+++.+. |+.++.|+-.. +
T Consensus 8 G~~~p~~~l~~~~g~~~~l~~~--~g-k~vll~f~~~~C-~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~-------~ 75 (148)
T 3hcz_A 8 GKKAPNLYMTDTTGTYRYLYDV--QA-KYTILFFWDSQC-GHCQQETPKLYDWWLKNRAK-GIQVYAANIER-------K 75 (148)
T ss_dssp TSBCCCCCCBCTTSCBCCGGGC--CC-SEEEEEEECGGG-CTTCSHHHHHHHHHHHHGGG-TEEEEEEECCS-------S
T ss_pred CCcCCceEEecCCCCEEEhHHc--CC-CEEEEEEECCCC-ccHHHHHHHHHHHHHHhccC-CEEEEEEEecC-------C
Confidence 34467777766543 444443 34 678888777666 44555556666666666665 67777776543 2
Q ss_pred HHHHHHHHHHcCCc---EEEccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 022336 237 ASKARKLEGKIGIK---VIRHRVKKPAGTAEEIEKHFGCQSSQLIMV 280 (299)
Q Consensus 237 ~e~a~~~lk~LGI~---vI~ha~KKP~p~le~alk~lGi~PeEiamV 280 (299)
.+.++.+.+..|++ ++...... ..+.+.+|+..--.++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~~i~~~P~~~l 117 (148)
T 3hcz_A 76 DEEWLKFIRSKKIGGWLNVRDSKNH-----TDFKITYDIYATPVLYV 117 (148)
T ss_dssp SHHHHHHHHHHTCTTSEEEECTTCC-----CCHHHHHCCCSSCEEEE
T ss_pred HHHHHHHHHHcCCCCceEEeccccc-----hhHHHhcCcCCCCEEEE
Confidence 45778888888765 22221110 12556777754444443
No 402
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=23.44 E-value=92 Score=26.26 Aligned_cols=76 Identities=13% Similarity=0.032 Sum_probs=46.8
Q ss_pred CCcCCccccCCc-----CCCCHHHHHHcCCcEEEEecc-CeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCC
Q 022336 159 HLALPHVTVPDI-----RYIDWAELQRRGFKGVVFDKD-NTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE 232 (299)
Q Consensus 159 ~ll~P~~~v~sI-----~~Id~~~Lk~~GIRaLVlD~D-NTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~ 232 (299)
.--.|++.++++ ..++++.+ .| |.+|++.= ++-+ +......+.+.+..+++++. |+.|+.||-..
T Consensus 30 G~~aP~f~l~~~~~~~g~~v~l~d~--~G-k~vll~F~pa~~C-p~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~---- 100 (220)
T 1zye_A 30 TQHAPYFKGTAVVSGEFKEISLDDF--KG-KYLVLFFYPLDFT-FVCPTEIIAFSDKASEFHDV-NCEVVAVSVDS---- 100 (220)
T ss_dssp TSBCCCCEEEEECSSSEEEEEGGGG--TT-SEEEEEECSCTTC-SSSHHHHHHHHHHHHHHHHT-TEEEEEEESSC----
T ss_pred CCCCCCcEEEeeeCCCCcEEEHHHh--CC-CeEEEEEECCCCC-CCCHHHHHHHHHHHHHHHHC-CCEEEEEECCC----
Confidence 344677777644 23455554 46 88888876 6655 44444445556666666665 88888887654
Q ss_pred CCccHHHHHHHHHHc
Q 022336 233 YDNDASKARKLEGKI 247 (299)
Q Consensus 233 ~d~~~e~a~~~lk~L 247 (299)
.+....+.+.+
T Consensus 101 ----~~~~~~~~~~~ 111 (220)
T 1zye_A 101 ----HFSHLAWINTP 111 (220)
T ss_dssp ----HHHHHHHHTSC
T ss_pred ----HHHHHHHHHHH
Confidence 45566666654
No 403
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=23.34 E-value=2.7e+02 Score=21.76 Aligned_cols=82 Identities=20% Similarity=0.213 Sum_probs=48.0
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRV 256 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~ 256 (299)
...=.+|+|..+--+ ...+.+|+.++.+. .+.+++||-|+..+... ....+.++.+.+.+|++++.-+.
T Consensus 94 ~d~iilv~D~~~~~s-------~~~~~~~~~~i~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa 166 (189)
T 1z06_A 94 VHAVVFVYDMTNMAS-------FHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSA 166 (189)
T ss_dssp CCEEEEEEETTCHHH-------HHTHHHHHHHHHHHCCCSCCCEEEEEECTTCGGGCCSCHHHHHHHHHHTTCCEEECCS
T ss_pred CCEEEEEEECcCHHH-------HHHHHHHHHHHHHhcCCCCCCEEEEEECccccccceeCHHHHHHHHHHcCCEEEEEeC
Confidence 444556666654221 23455666666543 26789999999854321 12346677888888988877665
Q ss_pred CCCH--HHHHHHHHH
Q 022336 257 KKPA--GTAEEIEKH 269 (299)
Q Consensus 257 KKP~--p~le~alk~ 269 (299)
+... .+++++.+.
T Consensus 167 ~~~~~~~~i~~l~~~ 181 (189)
T 1z06_A 167 KNPNDNDHVEAIFMT 181 (189)
T ss_dssp SSGGGGSCHHHHHHH
T ss_pred CcCCcccCHHHHHHH
Confidence 5441 234444443
No 404
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=23.30 E-value=2.1e+02 Score=20.58 Aligned_cols=44 Identities=9% Similarity=-0.157 Sum_probs=30.3
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNna 228 (299)
+.+++..+.+|++|.+- ++ ....+.++++++. -+.+++++|...
T Consensus 41 ~~l~~~~~dlvi~d~~l----~~-----~~g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 41 QQALAHPPDVLISDVNM----DG-----MDGYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp HHHHHSCCSEEEECSSC----SS-----SCHHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred HHHhcCCCCEEEEeCCC----CC-----CCHHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 45667889999999763 11 2346677777763 146899999875
No 405
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=23.26 E-value=3.5e+02 Score=23.07 Aligned_cols=13 Identities=15% Similarity=0.033 Sum_probs=5.5
Q ss_pred HHHHHHHcCCcEE
Q 022336 240 ARKLEGKIGIKVI 252 (299)
Q Consensus 240 a~~~lk~LGI~vI 252 (299)
+....+.+|+.++
T Consensus 54 i~~~~~~~g~~v~ 66 (252)
T 3oam_A 54 VEQAVQAFGGVVC 66 (252)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHcCCEEE
Confidence 3333344555443
No 406
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=23.24 E-value=2.5e+02 Score=21.32 Aligned_cols=77 Identities=12% Similarity=0.049 Sum_probs=45.7
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHH---hCCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcE
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKS---VFGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKV 251 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke---~fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~v 251 (299)
..++....=.+|+|.++--. ...+.+|+.++.+ ..+.+++||-|+..+.. .....+.++.+.+..++++
T Consensus 76 ~~~~~~d~~i~v~d~~~~~s-------~~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~ 148 (181)
T 2fn4_A 76 QYMRAGHGFLLVFAINDRQS-------FNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAY 148 (181)
T ss_dssp HHHHHCSEEEEEEETTCHHH-------HHHHHHHHHHHHHHHTSSCCCEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEE
T ss_pred HHHhhCCEEEEEEeCCCHHH-------HHHHHHHHHHHHHhcCCCCCCEEEEEECcccccccccCHHHHHHHHHHcCCeE
Confidence 44555555667777765211 2345566665532 12678999999985432 1123456777777888877
Q ss_pred EEccCCCC
Q 022336 252 IRHRVKKP 259 (299)
Q Consensus 252 I~ha~KKP 259 (299)
+.-+.+..
T Consensus 149 ~~~Sa~~~ 156 (181)
T 2fn4_A 149 FEASAKLR 156 (181)
T ss_dssp EECBTTTT
T ss_pred EEecCCCC
Confidence 76655443
No 407
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=23.20 E-value=1.9e+02 Score=24.38 Aligned_cols=50 Identities=12% Similarity=0.116 Sum_probs=30.8
Q ss_pred HHHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 175 WAELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 175 ~~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
++.|+ .|+.+|++|.+- ..+....+ ..+...+.+.|.+. |. +|++++...
T Consensus 80 ~~~l~-~~iPvV~~~~~~--~~~~~~~V~~D~~~~g~~a~~~L~~~-G~~~I~~i~~~~ 134 (285)
T 3c3k_A 80 LQNII-GAFPWVQCAEYD--PLSTVSSVSIDDVAASEYVVDQLVKS-GKKRIALINHDL 134 (285)
T ss_dssp HHHHH-TTSSEEEESSCC--TTSSSCEEECCHHHHHHHHHHHHHHT-TCCCEEEEECCT
T ss_pred HHHHh-cCCCEEEEcccc--CCCCCCEEEEChHHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 35677 899999998642 11111111 23445566677776 76 699998765
No 408
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=23.03 E-value=1.1e+02 Score=26.89 Aligned_cols=51 Identities=12% Similarity=0.005 Sum_probs=31.0
Q ss_pred EEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCC--CCH----HHHHHHHHHhCCCCCcEEEEc
Q 022336 221 IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVK--KPA----GTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 221 VaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~K--KP~----p~le~alk~lGi~PeEiamVG 281 (299)
++|+||++ ...+..+++++||+++....+ +.. ..+.+.++.+ +|+=++++|
T Consensus 33 ~~Visn~~--------~a~v~~~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~--~~Dliv~ag 89 (211)
T 3p9x_A 33 ALLITDKP--------GAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEK--QIDFVVLAG 89 (211)
T ss_dssp EEEEESCS--------SSHHHHHHHTTTCCEEECCGGGSSSHHHHHHHHHHHHHHT--TCCEEEESS
T ss_pred EEEEECCC--------CcHHHHHHHHcCCCEEEeChhhcCchhhhHHHHHHHHHhc--CCCEEEEeC
Confidence 77999987 246778888999997643211 111 2234444543 566666666
No 409
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=22.87 E-value=1.2e+02 Score=26.63 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=30.5
Q ss_pred EEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCC-CHHHHHHHHHHhCCCCCcEEEEc
Q 022336 221 IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKK-PAGTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 221 VaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KK-P~p~le~alk~lGi~PeEiamVG 281 (299)
++|+||++. .....++++.||+++....++ +...+.+.++.+ .++=++++|
T Consensus 39 ~~Vis~~~~--------a~~l~~A~~~gIp~~~~~~~~~~~~~~~~~L~~~--~~Dlivlag 90 (215)
T 3kcq_A 39 SCVISNNAE--------ARGLLIAQSYGIPTFVVKRKPLDIEHISTVLREH--DVDLVCLAG 90 (215)
T ss_dssp EEEEESCTT--------CTHHHHHHHTTCCEEECCBTTBCHHHHHHHHHHT--TCSEEEESS
T ss_pred EEEEeCCcc--------hHHHHHHHHcCCCEEEeCcccCChHHHHHHHHHh--CCCEEEEeC
Confidence 778999862 234567788999987543222 223455556654 455566655
No 410
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=22.76 E-value=2.2e+02 Score=20.50 Aligned_cols=43 Identities=12% Similarity=-0.096 Sum_probs=26.8
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
.+++..+.+|++|.+-. + ....+.++++++.. ..+++++|...
T Consensus 46 ~l~~~~~dlvi~d~~l~----~-----~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 46 LLGGFTPDLMICDIAMP----R-----MNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHTTCCCSEEEECCC--------------CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHhcCCCCEEEEecCCC----C-----CCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 44556788999998621 1 12345666666542 36899999876
No 411
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=22.59 E-value=1.5e+02 Score=22.39 Aligned_cols=107 Identities=9% Similarity=0.015 Sum_probs=57.7
Q ss_pred CCcCCccccCCcCC--CCHH--HHHHcCCcEEEEeccCeeecCC--CcccCchHHHHHHHH-HHhCCCcEEEEeCCCCCC
Q 022336 159 HLALPHVTVPDIRY--IDWA--ELQRRGFKGVVFDKDNTLTAPY--SLTLWGPLSSSIEQC-KSVFGHDIAVFSNSAGLY 231 (299)
Q Consensus 159 ~ll~P~~~v~sI~~--Id~~--~Lk~~GIRaLVlD~DNTLT~p~--~~~l~Pgv~e~L~~L-ke~fGikVaIVSNnaGs~ 231 (299)
.--.|++.+.++.. +++. .+ +| |.+++++=.|-. +. .....|.+.+..+++ +.. |+.++-||-..
T Consensus 8 G~~~p~f~l~~~~g~~~~l~~~~~--~g-k~vll~F~a~~C-~~v~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~--- 79 (150)
T 3fw2_A 8 GKYAPFFSLPNAKGEKITRSSDAF--KQ-KSLLINFWASWN-DSISQKQSNSELREIYKKYKKNK-YIGMLGISLDV--- 79 (150)
T ss_dssp TSBCCCCCEEBTTCCEECTTSTTT--TT-SEEEEEEECTTC-CCHHHHHHHHHHHHHHHHHTTCS-SEEEEEEECCS---
T ss_pred CCcCCccEeECCCCCEEecchhhh--CC-CEEEEEEEeCCC-CchHHHHHHHHHHHHHHHhccCC-CeEEEEEEcCC---
Confidence 34467777766543 3333 33 34 788888877666 22 333334444444444 332 56666665443
Q ss_pred CCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEE
Q 022336 232 EYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIM 279 (299)
Q Consensus 232 ~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiam 279 (299)
..+.++.+.+..++++......+. .-..+.+.+|+..--..+
T Consensus 80 ----~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~v~~~P~~~ 121 (150)
T 3fw2_A 80 ----DKQQWKDAIKRDTLDWEQVCDFGG--LNSEVAKQYSIYKIPANI 121 (150)
T ss_dssp ----CHHHHHHHHHHTTCCSEEECCSCG--GGCHHHHHTTCCSSSEEE
T ss_pred ----CHHHHHHHHHHhCCCceEEEcCcc--cchHHHHHcCCCccCeEE
Confidence 357788888888875432221111 112567788876443333
No 412
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=22.56 E-value=1.8e+02 Score=24.01 Aligned_cols=26 Identities=8% Similarity=0.199 Sum_probs=22.5
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCC
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAG 229 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaG 229 (299)
.+++.+.++.+++. |.+++.+|++.+
T Consensus 102 t~~~i~~~~~ak~~-g~~vI~IT~~~~ 127 (200)
T 1vim_A 102 TTSVVNISKKAKDI-GSKLVAVTGKRD 127 (200)
T ss_dssp CHHHHHHHHHHHHH-TCEEEEEESCTT
T ss_pred cHHHHHHHHHHHHC-CCeEEEEECCCC
Confidence 57888999999997 999999999873
No 413
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=22.48 E-value=2.7e+02 Score=24.93 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=30.1
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
.+++.|+|-. -++..+.+.+.+.++.+++. |+.+.|.||..
T Consensus 140 ~~~~~v~~sg------gGEPll~~~l~~ll~~~~~~-g~~i~l~TNG~ 180 (342)
T 2yx0_A 140 WNPTHAAISL------SGEPMLYPYMGDLVEEFHKR-GFTTFIVTNGT 180 (342)
T ss_dssp TSCCEEEECS------SSCGGGSTTHHHHHHHHHHT-TCEEEEEECSC
T ss_pred cCCCEEEEcC------CCcccchhhHHHHHHHHHHC-CCcEEEEcCCC
Confidence 3456566543 34555567889999999986 99999999975
No 414
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=22.45 E-value=3.5e+02 Score=22.78 Aligned_cols=49 Identities=14% Similarity=0.265 Sum_probs=28.9
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
+.+++ |+.+|++|.+-. .+.-..+ ..+...+.+.|.+. |. +|++++...
T Consensus 83 ~~~~~-~iPvV~i~~~~~--~~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~ 136 (289)
T 3k9c_A 83 GALAD-RVPALVVARASG--LPGVGAVRGDDVAGITLAVDHLTEL-GHRNIAHIDGAD 136 (289)
T ss_dssp HHHHT-TSCEEEESSCCS--STTSEEEEECHHHHHHHHHHHHHHT-TCCSEEEECCTT
T ss_pred HHHHc-CCCEEEEcCCCC--CCCCCEEEeChHHHHHHHHHHHHHC-CCCcEEEEeCCC
Confidence 34444 999999886521 1111111 23445666677776 76 699998765
No 415
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=22.45 E-value=2.9e+02 Score=21.88 Aligned_cols=56 Identities=5% Similarity=-0.005 Sum_probs=35.9
Q ss_pred chHHHHHHHHHHhC--CCcEEEEeCCCCCCCC-CccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 204 GPLSSSIEQCKSVF--GHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 204 Pgv~e~L~~Lke~f--GikVaIVSNnaGs~~~-d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
..+..|+..+.+.. +.+++||-|+..+... ....+.+..+.+..|++++.-+.+..
T Consensus 97 ~~~~~~~~~i~~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~g 155 (206)
T 2bcg_Y 97 NGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDS 155 (206)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECTTCTTTCCSCHHHHHHHHHHTTCCEEECCTTTC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCeEEEEeCCCC
Confidence 34556777665531 4789999999855321 22345677788888988876654444
No 416
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=22.41 E-value=3.9e+02 Score=23.43 Aligned_cols=12 Identities=8% Similarity=0.324 Sum_probs=5.2
Q ss_pred HHHHHcCCcEEE
Q 022336 176 AELQRRGFKGVV 187 (299)
Q Consensus 176 ~~Lk~~GIRaLV 187 (299)
+.+++.|+.-|+
T Consensus 51 ~~l~~~~i~~Iv 62 (264)
T 3k8d_A 51 ERARESGAERII 62 (264)
T ss_dssp HHHHHTTCSEEE
T ss_pred HHHHhCCCCEEE
Confidence 344444444333
No 417
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=22.39 E-value=37 Score=29.22 Aligned_cols=85 Identities=18% Similarity=0.203 Sum_probs=59.0
Q ss_pred chHHHHHHHHHHhCCCcEEEEeCCCCCCC-CC--c--c-HHHHHHHHHHcCCcEEEccCCCCHHH-HHHHHHHh----CC
Q 022336 204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYE-YD--N--D-ASKARKLEGKIGIKVIRHRVKKPAGT-AEEIEKHF----GC 272 (299)
Q Consensus 204 Pgv~e~L~~Lke~fGikVaIVSNnaGs~~-~d--~--~-~e~a~~~lk~LGI~vI~ha~KKP~p~-le~alk~l----Gi 272 (299)
+...+.++.|++. |++ +|+||+..... .. . . ......+...++...+. ..||.+. ++.+++++ |+
T Consensus 148 ~~~~~l~~~L~~~-g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~--~~KP~p~~~~~a~~~l~~~~~~ 223 (284)
T 2hx1_A 148 HDLNKTVNLLRKR-TIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIR--FGKPDSQMFMFAYDMLRQKMEI 223 (284)
T ss_dssp HHHHHHHHHHHHC-CCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEE--ESTTSSHHHHHHHHHHHTTSCC
T ss_pred ccHHHHHHHHhcC-CCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeE--ecCCCHHHHHHHHHHHhhccCC
Confidence 3445555577776 999 99999863222 01 1 1 23344555555655443 3588874 89999999 99
Q ss_pred CCCcEEEEcCCc-ccccccce
Q 022336 273 QSSQLIMVDMCR-IVIFPGPV 292 (299)
Q Consensus 273 ~PeEiamVGDrl-~DI~gAn~ 292 (299)
+|++++||||++ .||.+|+.
T Consensus 224 ~~~~~~~VGD~~~~Di~~A~~ 244 (284)
T 2hx1_A 224 SKREILMVGDTLHTDILGGNK 244 (284)
T ss_dssp CGGGEEEEESCTTTHHHHHHH
T ss_pred CcceEEEECCCcHHHHHHHHH
Confidence 999999999996 99998875
No 418
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=22.33 E-value=1.7e+02 Score=21.52 Aligned_cols=109 Identities=9% Similarity=-0.003 Sum_probs=56.8
Q ss_pred CCCcCCccccCCcCC--CCHH--HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHH-HHhCCCcEEEEeCCCCCCC
Q 022336 158 RHLALPHVTVPDIRY--IDWA--ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQC-KSVFGHDIAVFSNSAGLYE 232 (299)
Q Consensus 158 p~ll~P~~~v~sI~~--Id~~--~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~L-ke~fGikVaIVSNnaGs~~ 232 (299)
+.--.|++.+.+... +++. .+ .| |.+++++=++-. +......|.+.+..+++ ... |+.++-|+-..
T Consensus 7 ~g~~~p~~~l~~~~g~~~~l~~~~~--~g-k~vll~F~~~~C-~~C~~~~~~l~~l~~~~~~~~-~~~~v~v~~d~---- 77 (148)
T 3fkf_A 7 VGKSAPYFSLPNEKGEKLSRSAERF--RN-RYLLLNFWASWC-DPQPEANAELKRLNKEYKKNK-NFAMLGISLDI---- 77 (148)
T ss_dssp TTSBCCCCCEEBTTSCEECTTSTTT--TT-SEEEEEEECGGG-CCCHHHHHHHHHHHHHTTTCT-TEEEEEEECCS----
T ss_pred CCCcCCCeEeeCCCCCEEecccccc--CC-cEEEEEEECCCC-HHHHHHhHHHHHHHHHhcCCC-CeEEEEEECCC----
Confidence 344567777766543 3333 33 34 678888777766 33433334444433333 222 45555555432
Q ss_pred CCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 022336 233 YDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMV 280 (299)
Q Consensus 233 ~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiamV 280 (299)
..+.++.+.+..|+++......+. .-..+.+.+|+..--.++|
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~v~~~P~~~l 120 (148)
T 3fkf_A 78 ---DREAWETAIKKDTLSWDQVCDFTG--LSSETAKQYAILTLPTNIL 120 (148)
T ss_dssp ---CHHHHHHHHHHTTCCSEEECCSCG--GGCHHHHHTTCCSSSEEEE
T ss_pred ---CHHHHHHHHHHcCCCceEEEccCC--cchHHHHhcCCCCcCEEEE
Confidence 356778888888875332221111 1125667888764444333
No 419
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=22.30 E-value=2.2e+02 Score=25.28 Aligned_cols=18 Identities=22% Similarity=0.300 Sum_probs=10.5
Q ss_pred HHHHHHHhCCC-cEEEEeCC
Q 022336 209 SIEQCKSVFGH-DIAVFSNS 227 (299)
Q Consensus 209 ~L~~Lke~fGi-kVaIVSNn 227 (299)
.++.+... |+ .|+|+|+.
T Consensus 40 ~l~~l~~~-gi~~Iivv~~~ 58 (295)
T 1lvw_A 40 PLSVLMLA-GIRDILIISTP 58 (295)
T ss_dssp HHHHHHHT-TCCEEEEEECT
T ss_pred HHHHHHHC-CCCeEEEEecc
Confidence 45556654 66 46666653
No 420
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=22.11 E-value=1.8e+02 Score=25.89 Aligned_cols=95 Identities=22% Similarity=0.294 Sum_probs=55.0
Q ss_pred ccCCcCCCCHH-------HHHHcCCcEEEEec-cCeeecCCCcccCchHHHHHHHHH-HhCCCcEEEEeCCCCCCCCCcc
Q 022336 166 TVPDIRYIDWA-------ELQRRGFKGVVFDK-DNTLTAPYSLTLWGPLSSSIEQCK-SVFGHDIAVFSNSAGLYEYDND 236 (299)
Q Consensus 166 ~v~sI~~Id~~-------~Lk~~GIRaLVlD~-DNTLT~p~~~~l~Pgv~e~L~~Lk-e~fGikVaIVSNnaGs~~~d~~ 236 (299)
..|||...|+. .+.+.|.+.+-+|+ ||..+ |+ ..+.+.+.+.|++.- +. -+.+=+..+++
T Consensus 30 i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FV-pn-it~G~~~v~~lr~~~p~~-~ldvHLmv~~p-------- 98 (246)
T 3inp_A 30 INPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYV-PN-LTFGPMVLKALRDYGITA-GMDVHLMVKPV-------- 98 (246)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSS-SC-BCCCHHHHHHHHHHTCCS-CEEEEEECSSC--------
T ss_pred eehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcC-cc-hhcCHHHHHHHHHhCCCC-eEEEEEeeCCH--------
Confidence 44666666663 45568999999996 88877 33 356667766666543 22 23454667776
Q ss_pred HHHHHHHHHHcCCcEE-EccCCCCHH-HHHHHHHHhCC
Q 022336 237 ASKARKLEGKIGIKVI-RHRVKKPAG-TAEEIEKHFGC 272 (299)
Q Consensus 237 ~e~a~~~lk~LGI~vI-~ha~KKP~p-~le~alk~lGi 272 (299)
...++.+ .+.|.+.+ .|...-+.. ...+.++..|+
T Consensus 99 ~~~i~~~-~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~ 135 (246)
T 3inp_A 99 DALIESF-AKAGATSIVFHPEASEHIDRSLQLIKSFGI 135 (246)
T ss_dssp HHHHHHH-HHHTCSEEEECGGGCSCHHHHHHHHHTTTS
T ss_pred HHHHHHH-HHcCCCEEEEccccchhHHHHHHHHHHcCC
Confidence 4455544 45677654 343212222 23344566665
No 421
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=22.05 E-value=3e+02 Score=21.91 Aligned_cols=77 Identities=9% Similarity=0.085 Sum_probs=44.8
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh--CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEE
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV--FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVI 252 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~--fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI 252 (299)
..++....=.+|+|.++--. ...+..|+..+++. .+.+++||-|+..+.. .......+..+.+..+++++
T Consensus 93 ~~~~~~d~~i~v~d~~~~~s-------~~~~~~~~~~~~~~~~~~~piilv~nK~Dl~~~~~v~~~~~~~~~~~~~~~~~ 165 (200)
T 2o52_A 93 SYYRGAAGALLVYDITSRET-------YNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFL 165 (200)
T ss_dssp HHHTTCSEEEEEEETTCHHH-------HHTHHHHHHHHHHHTCTTCEEEEEEECGGGGGGCCSCHHHHHHHHHHTTCEEE
T ss_pred HHhccCCEEEEEEECcCHHH-------HHHHHHHHHHHHHhcCCCCcEEEEEECCCcccccccCHHHHHHHHHHcCCEEE
Confidence 33444444456666654221 23456677666542 2678999999985431 11234567777888888777
Q ss_pred EccCCCC
Q 022336 253 RHRVKKP 259 (299)
Q Consensus 253 ~ha~KKP 259 (299)
.-+.+..
T Consensus 166 ~~SA~~g 172 (200)
T 2o52_A 166 ETSALTG 172 (200)
T ss_dssp EECTTTC
T ss_pred EEeCCCC
Confidence 6554443
No 422
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=21.87 E-value=3.3e+02 Score=22.34 Aligned_cols=56 Identities=9% Similarity=0.164 Sum_probs=30.2
Q ss_pred HHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEE
Q 022336 210 IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMV 280 (299)
Q Consensus 210 L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiamV 280 (299)
.+.|.+. |..+.++..+. +.++.+.+.+|+.++......+ +.++..++...+++++
T Consensus 16 a~~L~~~-g~~v~vid~~~---------~~~~~l~~~~~~~~i~gd~~~~-----~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 16 ARSMLSR-KYGVVIINKDR---------ELCEEFAKKLKATIIHGDGSHK-----EILRDAEVSKNDVVVI 71 (218)
T ss_dssp HHHHHHT-TCCEEEEESCH---------HHHHHHHHHSSSEEEESCTTSH-----HHHHHHTCCTTCEEEE
T ss_pred HHHHHhC-CCeEEEEECCH---------HHHHHHHHHcCCeEEEcCCCCH-----HHHHhcCcccCCEEEE
Confidence 3445554 78887777653 5566666666665554322221 3344556655554443
No 423
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=21.66 E-value=4.7e+02 Score=23.94 Aligned_cols=95 Identities=16% Similarity=0.117 Sum_probs=56.2
Q ss_pred HHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEcc-
Q 022336 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHR- 255 (299)
Q Consensus 177 ~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha- 255 (299)
..++.|-.++.|+-.++.. .+ -.+.+.+..+-|..- . .++++-... ...++.+++..+++++--+
T Consensus 59 A~~~LGg~~i~l~~~~~s~-~~---kgEsl~DTarvls~~-~-D~iviR~~~--------~~~~~~la~~~~vPVINaG~ 124 (299)
T 1pg5_A 59 AIINLGGDVIGFSGEESTS-VA---KGENLADTIRMLNNY-S-DGIVMRHKY--------DGASRFASEISDIPVINAGD 124 (299)
T ss_dssp HHHHTTCEEEEEECC-----------CCCHHHHHHHHHHH-C-SEEEEEESS--------BTHHHHHHHHCSSCEEEEEE
T ss_pred HHHHhCCEEEEeCCCCccc-cc---CCCCHHHHHHHHHHh-C-CEEEEeCCC--------hhHHHHHHHhCCCCEEeCCC
Confidence 3456788888887655321 11 225566666666553 3 444443332 3467778888889988641
Q ss_pred CCCCHH--H---HHHHHHHhC-CCCCcEEEEcCCcc
Q 022336 256 VKKPAG--T---AEEIEKHFG-CQSSQLIMVDMCRI 285 (299)
Q Consensus 256 ~KKP~p--~---le~alk~lG-i~PeEiamVGDrl~ 285 (299)
...-+| . +..+.+++| ++--.+++|||-.+
T Consensus 125 g~~~HPtQ~LaDl~Ti~e~~g~l~gl~va~vGD~~~ 160 (299)
T 1pg5_A 125 GKHEHPTQAVIDIYTINKHFNTIDGLVFALLGDLKY 160 (299)
T ss_dssp TTTBCHHHHHHHHHHHHHHHSCSTTCEEEEEECCSS
T ss_pred CCCcCcHHHHHHHHHHHHHhCCcCCcEEEEECCCCC
Confidence 123334 2 567777887 45567999999643
No 424
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.64 E-value=1.8e+02 Score=25.09 Aligned_cols=54 Identities=17% Similarity=0.102 Sum_probs=31.9
Q ss_pred CCc-EEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCC--CCH----HHHHHHHHHhCCCCCcEEEEc
Q 022336 218 GHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVK--KPA----GTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 218 Gik-VaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~K--KP~----p~le~alk~lGi~PeEiamVG 281 (299)
+.. ++|+||.+ ......++++.||+++....+ +.. ..+.+.++. .+|+=++++|
T Consensus 27 ~~~I~~Vvs~~~--------~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~--~~~Dliv~a~ 87 (209)
T 1meo_A 27 SAQIDIVISNKA--------AVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEE--FSIDIVCLAG 87 (209)
T ss_dssp SCEEEEEEESST--------TCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHH--TTCCEEEEES
T ss_pred CcEEEEEEeCCC--------ChHHHHHHHHcCCCEEEECccccCchhhhhHHHHHHHHh--cCCCEEEEcc
Confidence 344 67889986 334567788999998743221 211 123344444 4566677777
No 425
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=21.59 E-value=2.2e+02 Score=20.15 Aligned_cols=44 Identities=9% Similarity=0.009 Sum_probs=28.9
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++..+.+++++|+..
T Consensus 41 ~~~~~~~~dlvi~D~~l----~~-----~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 41 QILSEYDINLVIMDINL----PG-----KNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp HHHHHSCCSEEEECSSC----SS-----SCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred HHHhcCCCCEEEEcCCC----CC-----CCHHHHHHHHHhCCCCcEEEEECCC
Confidence 44566788999998763 11 1234566666654367899999876
No 426
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=21.56 E-value=1.5e+02 Score=23.42 Aligned_cols=45 Identities=9% Similarity=0.092 Sum_probs=27.6
Q ss_pred HHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 178 Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
++....-.+|+|+++-. .-...+..|+.++++.. +.+++||-|+.
T Consensus 77 ~~~~~~~i~v~d~~~~~------~s~~~~~~~~~~~~~~~~~~piilv~nK~ 122 (184)
T 2zej_A 77 MTQRALYLAVYDLSKGQ------AEVDAMKPWLFNIKARASSSPVILVGTHL 122 (184)
T ss_dssp HHHSEEEEEEEEGGGCH------HHHHTHHHHHHHHHHHCTTCEEEEEEECG
T ss_pred ccCCcEEEEEEeCCcch------hHHHHHHHHHHHHHhhCCCCcEEEEEECC
Confidence 44444445678876521 01135567777776532 67899999996
No 427
>3p3g_A UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; lipid A biosynthesis, lipid A synthesis, LPXC, BAAB sandwich hydrolase; HET: 3P3 UKW; 1.65A {Escherichia coli} PDB: 3ps1_A* 3ps2_A* 3ps3_A* 3nzk_A*
Probab=21.41 E-value=1.8e+02 Score=27.15 Aligned_cols=54 Identities=28% Similarity=0.350 Sum_probs=35.9
Q ss_pred CHHHHHHcCC-------cEEEEeccCeeecCCCcccCc-----hHHHHHHHHHHhCCCcE--EEEeCCCC
Q 022336 174 DWAELQRRGF-------KGVVFDKDNTLTAPYSLTLWG-----PLSSSIEQCKSVFGHDI--AVFSNSAG 229 (299)
Q Consensus 174 d~~~Lk~~GI-------RaLVlD~DNTLT~p~~~~l~P-----gv~e~L~~Lke~fGikV--aIVSNnaG 229 (299)
+.+.|+++|. .+||+|-|++|. +....+.+ .+.+.+-.|.-. |.++ -+++.++|
T Consensus 197 eve~L~~~GLa~GGsLdNAiVi~~~~vlN-~~gLRf~dE~VRHKiLD~IGDLaL~-G~pi~G~~~a~k~G 264 (300)
T 3p3g_A 197 DIEYLQSRGLCLGGSFDCAIVVDDYRVLN-EDGLRFEDEFVRHKMLDAIGDLFMC-GHNIIGAFTAYKSG 264 (300)
T ss_dssp HHHHHHHTTCSTTCCTTTCEEECSSSBCS-TTCCSSTTHHHHHHHHHHHHHHGGG-SSCEEEEEEEESCC
T ss_pred HHHHHHHCCcccccCccceEEEcCCcccC-CCCCcCCCchhhHHHHHHHHHHHhc-CCCeEEEEEEEcCC
Confidence 3477888875 789999999998 54444433 334566666554 7653 37777765
No 428
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.34 E-value=2.6e+02 Score=21.95 Aligned_cols=44 Identities=14% Similarity=-0.034 Sum_probs=28.5
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.++...+.+|++|++= |+ ....+.++++++.. +.+|+++|...
T Consensus 45 ~~~~~~~~dlvl~D~~l----p~-----~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 45 KLAGAEKFEFITVXLHL----GN-----DSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHTTSCCSEEEECSEE----TT-----EESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHhhCCCCEEEEeccC----CC-----ccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 34556678899998751 22 23355666666542 46899999876
No 429
>3uhm_A UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; amidohydrolases, anti-bacterial agents, bacteria, catalytic drug design; HET: RFN; 1.26A {Pseudomonas aeruginosa} PDB: 2ves_A* 3u1y_A* 3p3e_A*
Probab=21.33 E-value=1.8e+02 Score=27.07 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=36.3
Q ss_pred CHHHHHHcCC-------cEEEEeccCeeecCCCcccCc-----hHHHHHHHHHHhCCCcE--EEEeCCCC
Q 022336 174 DWAELQRRGF-------KGVVFDKDNTLTAPYSLTLWG-----PLSSSIEQCKSVFGHDI--AVFSNSAG 229 (299)
Q Consensus 174 d~~~Lk~~GI-------RaLVlD~DNTLT~p~~~~l~P-----gv~e~L~~Lke~fGikV--aIVSNnaG 229 (299)
+.+.|+++|. .+||+|-|++|. +....+.+ .+.+.+-.|.-. |.++ -+++.++|
T Consensus 196 eve~L~~~GLa~GGsLdNAiVi~~~~vlN-~~gLRf~dE~VRHKiLD~IGDLaL~-G~pi~G~~~a~k~G 263 (299)
T 3uhm_A 196 DIEYLRSQNLALGGSVENAIVVDENRVLN-EDGLRYEDEFVKHKILDAIGDLYLL-GNSLIGEFRGFKSG 263 (299)
T ss_dssp GHHHHHHHTCCTTCSTTTSEEECSSSBCC-TTCCSSTTHHHHHHHHHHHHHHHTT-SSEEEEEEEEESCC
T ss_pred HHHHHHHCCcccccCccceEEEcCCcccC-CCCccCCCchhhHHHHHHHHHHHhc-CCCceEEEEEECCC
Confidence 4578888875 789999999998 54444433 335666666664 7653 37777765
No 430
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=21.28 E-value=2.3e+02 Score=20.28 Aligned_cols=39 Identities=15% Similarity=0.043 Sum_probs=26.3
Q ss_pred cCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC---CCcEEEEeCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF---GHDIAVFSNSA 228 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f---GikVaIVSNna 228 (299)
..+.+|++|.+- ++ ....+.++++++.. +.+++++|+..
T Consensus 54 ~~~dlvi~d~~~----~~-----~~g~~~~~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 54 SRPDLILLXLNL----PK-----KDGREVLAEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp CCCSEEEECSSC----SS-----SCHHHHHHHHHHSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEecCC----Cc-----ccHHHHHHHHHcCcccccccEEEEecCC
Confidence 568899999763 11 23456677777641 46899999876
No 431
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=21.26 E-value=1.1e+02 Score=32.29 Aligned_cols=80 Identities=9% Similarity=0.032 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHhcCCCCcCCccccC----CcCCCCHH-------HHHHcCC--cEEEEeccCe-----eecCCCcccCc
Q 022336 143 NVEGIVSSTVVFAKDRHLALPHVTVP----DIRYIDWA-------ELQRRGF--KGVVFDKDNT-----LTAPYSLTLWG 204 (299)
Q Consensus 143 N~~gi~~~~~~~~~~p~ll~P~~~v~----sI~~Id~~-------~Lk~~GI--RaLVlD~DNT-----LT~p~~~~l~P 204 (299)
....+..-...|.-.| .+.|.+.+. .-..-+.+ .++++|| .++++|.|=. .| ++ ..-.|
T Consensus 269 tp~~Vv~~Y~~ltG~p-~lpP~WalG~~qsr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt-~D-~~~FP 345 (875)
T 3l4y_A 269 TPEQVVQEYLELIGRP-ALPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFT-YD-SVDFK 345 (875)
T ss_dssp SHHHHHHHHHHHHCCC-CCCCGGGGSEEECCSCCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSBTTBTTC-CC-TTTTT
T ss_pred CHHHHHHHHHHHhCCC-CCCCccccccceeccCCCCHHHHHHHHHHHHhcCCCCceEEEccchhcCCCcee-eC-hhhCC
Confidence 5667777777667666 477887763 22333433 4467888 9999998832 33 22 23456
Q ss_pred hHHHHHHHHHHhCCCcEEEEeC
Q 022336 205 PLSSSIEQCKSVFGHDIAVFSN 226 (299)
Q Consensus 205 gv~e~L~~Lke~fGikVaIVSN 226 (299)
+..+++++|++. |+++++.-+
T Consensus 346 dp~~mv~~Lh~~-G~k~v~~id 366 (875)
T 3l4y_A 346 GFPEFVNELHNN-GQKLVIIVD 366 (875)
T ss_dssp THHHHHHHHHHT-TCEEEEEEC
T ss_pred CHHHHHHHHHHC-CCEEEEEeC
Confidence 788999999997 999887544
No 432
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=21.26 E-value=1.7e+02 Score=24.38 Aligned_cols=46 Identities=15% Similarity=0.060 Sum_probs=25.7
Q ss_pred cCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 181 RGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 181 ~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
.||.+|++|.+-. ..+.-..+ ......+.+.|.+. |. +|++++...
T Consensus 78 ~~iPvV~~~~~~~-~~~~~~~V~~D~~~~g~~a~~~L~~~-G~~~i~~i~~~~ 128 (280)
T 3gyb_A 78 SLPPFVIAGTRIT-QASTHDSVANDDFRGAEIATKHLIDL-GHTHIAHLRVGS 128 (280)
T ss_dssp -CCCEEEESCCCS-SSCSTTEEEECHHHHHHHHHHHHHHT-TCCSEEEECCSS
T ss_pred cCCCEEEECCCCC-CCCCCCEEEechHHHHHHHHHHHHHC-CCCeEEEEeCCC
Confidence 7888888886541 10111111 23444555666665 65 688888765
No 433
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=21.23 E-value=1.3e+02 Score=24.73 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=30.0
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNS 227 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNn 227 (299)
+.|++.|+..|++|.+. +.-..+ ..+...+.+.|.+. |. +|++++..
T Consensus 73 ~~l~~~~~pvV~~~~~~----~~~~~V~~d~~~~~~~a~~~L~~~-G~~~I~~i~~~ 124 (255)
T 1byk_A 73 EMLAHWQSSLVLLARDA----KGFASVCYDDEGAIKILMQRLYDQ-GHRNISYLGVP 124 (255)
T ss_dssp TTSGGGSSSEEEESSCC----SSCEEEEECHHHHHHHHHHHHHHT-TCCCEEEECCC
T ss_pred HHHHhcCCCEEEEcccc----CCCCEEEEccHHHHHHHHHHHHHc-CCCeEEEEecC
Confidence 34567789999998752 121112 23445666777776 76 69999865
No 434
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=21.21 E-value=2.9e+02 Score=27.19 Aligned_cols=70 Identities=14% Similarity=0.066 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCc-EEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEEc
Q 022336 207 SSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 207 ~e~L~~Lke~fGik-VaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p~le~alk~lGi~PeEiamVG 281 (299)
...|+.|.+. |+. ++|+||..... .......+..+++++||+++.... +..+.+.+.++.+ .|+=++++|
T Consensus 13 ~~~l~~l~~~-~~~i~~v~t~~~~~~-~~~~~~~~~~~a~~~~ip~~~~~~-~~~~~~~~~l~~~--~~d~iv~~~ 83 (660)
T 1z7e_A 13 CLGIEALLAA-GYEISAIFTHTDNPG-EKAFYGSVARLAAERGIPVYAPDN-VNHPLWVERIAQL--SPDVIFSFY 83 (660)
T ss_dssp HHHHHHHHHT-TCEEEEEECCCC---------CCHHHHHHHHTCCEECCSC-TTSHHHHHHHHHH--CCSEEEEES
T ss_pred HHHHHHHHhC-CCCEEEEEeCCCCCc-cCcCccHHHHHHHHcCCCEeccCC-CCcHHHHHHHHhc--CCCEEEEcC
Confidence 3457777765 775 67889875100 000011378888999999875432 2223455556655 466677777
No 435
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=21.20 E-value=1.8e+02 Score=23.93 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=35.8
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHH
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKAR 241 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~ 241 (299)
+.|++.|+..+-. ++.+++. +.+.+.|+++.+..+..++|+|+..|.+.+|...+.+.
T Consensus 38 ~~L~~~G~~v~~~----~iv~Dd~----~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~ 95 (169)
T 1y5e_A 38 ELLKEAGHKVTSY----EIVKDDK----ESIQQAVLAGYHKEDVDVVLTNGGTGITKRDVTIEAVS 95 (169)
T ss_dssp HHHHHHTCEEEEE----EEECSSH----HHHHHHHHHHHTCTTCSEEEEECCCSSSTTCCHHHHHH
T ss_pred HHHHHCCCeEeEE----EEeCCCH----HHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCCcHHHHH
Confidence 4667789875432 3442221 34566777665511478999999998887676555443
No 436
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=21.18 E-value=2.3e+02 Score=23.29 Aligned_cols=42 Identities=14% Similarity=0.024 Sum_probs=24.7
Q ss_pred HHHHHHHHc-CCcEEEccCCCCHHHHHHHHHHhCCCCCcEEEEc
Q 022336 239 KARKLEGKI-GIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 239 ~a~~~lk~L-GI~vI~ha~KKP~p~le~alk~lGi~PeEiamVG 281 (299)
.+..+++.. .+..++-..---..++.++++..|+ |+++.+||
T Consensus 177 ~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~-p~di~vig 219 (276)
T 3ksm_A 177 EMLRLLKETPTIDGLFTPNESTTIGALVAIRQSGM-SKQFGFIG 219 (276)
T ss_dssp HHHHHHHHCSCCCEEECCSHHHHHHHHHHHHHTTC-TTSSEEEE
T ss_pred HHHHHHHhCCCceEEEECCchhhhHHHHHHHHcCC-CCCeEEEE
Confidence 344444443 3455543211111246788899999 99988887
No 437
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=21.12 E-value=1.2e+02 Score=31.80 Aligned_cols=80 Identities=10% Similarity=0.111 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHhcCCCCcCCccccC----CcCCCCH-------HHHHHcCC--cEEEEecc----------CeeecCCC
Q 022336 143 NVEGIVSSTVVFAKDRHLALPHVTVP----DIRYIDW-------AELQRRGF--KGVVFDKD----------NTLTAPYS 199 (299)
Q Consensus 143 N~~gi~~~~~~~~~~p~ll~P~~~v~----sI~~Id~-------~~Lk~~GI--RaLVlD~D----------NTLT~p~~ 199 (299)
....+..-...|.-.| .+.|.+.+. ....-+. +.++++|| .++++|.| |..+ ++
T Consensus 241 ~p~~v~~~Y~~ltG~~-~lpP~WalG~~~sr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d~~~~~gdft-wd- 317 (817)
T 4ba0_A 241 SYPSLIENFTQVTGRQ-PLPPRWALGSFASRFGYRSEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLD-WD- 317 (817)
T ss_dssp SHHHHHHHHHHHHCCC-CCCCGGGGSBEECCBCCCSHHHHHHHHHHHHHHTCCCCEEEECGGGSCSSSSSCTTCCS-CC-
T ss_pred CHHHHHHHHHHhcCCC-CCCCccccCcceecccCCCHHHHHHHHHHHHHhCCCCcEEEEcccccCCccccccCccc-cc-
Confidence 4566666666566555 477888773 1222233 34567788 99999985 2334 22
Q ss_pred cccCchHHHHHHHHHHhCCCcEEEEeC
Q 022336 200 LTLWGPLSSSIEQCKSVFGHDIAVFSN 226 (299)
Q Consensus 200 ~~l~Pgv~e~L~~Lke~fGikVaIVSN 226 (299)
..-.|.-.+++++|++. |+++++.-+
T Consensus 318 ~~~FPdp~~mv~~Lh~~-G~k~vl~i~ 343 (817)
T 4ba0_A 318 KENFPTPLDMMADFKQQ-GVKTVLITE 343 (817)
T ss_dssp TTTCSCHHHHHHHHHHT-TCEEEEEEC
T ss_pred cccCCCHHHHHHHHHHC-CCEEEEEeC
Confidence 22345568999999997 999887654
No 438
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=21.03 E-value=3e+02 Score=21.44 Aligned_cols=59 Identities=8% Similarity=0.106 Sum_probs=33.7
Q ss_pred HHHHHHHHh-CCCcEEEEeCCCCCCC-------------CCccHHHHHHHHHHcC-CcEEEccCCCCHHHHHHH
Q 022336 208 SSIEQCKSV-FGHDIAVFSNSAGLYE-------------YDNDASKARKLEGKIG-IKVIRHRVKKPAGTAEEI 266 (299)
Q Consensus 208 e~L~~Lke~-fGikVaIVSNnaGs~~-------------~d~~~e~a~~~lk~LG-I~vI~ha~KKP~p~le~a 266 (299)
.|+..+++. -+.+++||-|+..+.. .....+.+..+++.+| ++++.-+.+.-..+++++
T Consensus 100 ~~~~~i~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~e~Sa~~~~~gi~~l 173 (184)
T 1m7b_A 100 KWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDI 173 (184)
T ss_dssp THHHHHHHHCTTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSEEEECBTTTBHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEEcchhhcchhhHhhhhhcccCCCCHHHHHHHHHHcCCcEEEEeeecCCCcCHHHH
Confidence 455555542 1578999999984431 0122455777888888 567666654333333333
No 439
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.03 E-value=1.3e+02 Score=25.51 Aligned_cols=70 Identities=14% Similarity=0.192 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccCCCCHH--HHHHHHHHhCCCCCcEEEEcC
Q 022336 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG--TAEEIEKHFGCQSSQLIMVDM 282 (299)
Q Consensus 205 gv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~KKP~p--~le~alk~lGi~PeEiamVGD 282 (299)
++..+|.++++. +-+++||+-..= ...++.+.+-||++........+.. ...+-++.-|++ ++|||
T Consensus 82 Dil~al~~a~~~-~~kIavvg~~~~-------~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~----vvVG~ 149 (196)
T 2q5c_A 82 DTMRAVYNAKRF-GNELALIAYKHS-------IVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIK----IVVSG 149 (196)
T ss_dssp HHHHHHHHHGGG-CSEEEEEEESSC-------SSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCC----EEEEC
T ss_pred HHHHHHHHHHhh-CCcEEEEeCcch-------hhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCe----EEECC
Confidence 456667777764 779999988751 2346778888887643332223332 122223334553 58998
Q ss_pred Cccc
Q 022336 283 CRIV 286 (299)
Q Consensus 283 rl~D 286 (299)
.+..
T Consensus 150 ~~~~ 153 (196)
T 2q5c_A 150 KTVT 153 (196)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 440
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=20.99 E-value=27 Score=33.06 Aligned_cols=12 Identities=50% Similarity=0.396 Sum_probs=11.0
Q ss_pred cEEEEeccCeee
Q 022336 184 KGVVFDKDNTLT 195 (299)
Q Consensus 184 RaLVlD~DNTLT 195 (299)
+..|||.||||+
T Consensus 41 ~~AVFD~DgTl~ 52 (385)
T 4gxt_A 41 PFAVFDWDNTSI 52 (385)
T ss_dssp EEEEECCTTTTE
T ss_pred CEEEEcCCCCee
Confidence 679999999997
No 441
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=20.93 E-value=1.3e+02 Score=27.54 Aligned_cols=63 Identities=19% Similarity=0.166 Sum_probs=43.7
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCc
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~ 250 (299)
..+++...+.+|+=+-|..... ......+.+.+..+++. |++++||++. ...+....+.+|++
T Consensus 42 pyi~~~~~k~iVIKlGGs~l~~--~~~~~~l~~~i~~l~~~-G~~vVlVhGg---------G~~i~~~~~~~g~~ 104 (321)
T 2v5h_A 42 PYLQQFAGRTVVVKYGGAAMKQ--EELKEAVMRDIVFLACV-GMRPVVVHGG---------GPEINAWLGRVGIE 104 (321)
T ss_dssp HHHHHTTTCEEEEEECTHHHHS--HHHHHHHHHHHHHHHHT-TCEEEEEECC---------HHHHHHHHHHTTCC
T ss_pred HHHHHhCCCeEEEEECchhhCC--chHHHHHHHHHHHHHHC-CCEEEEEECC---------HHHHHHHHHHcCCC
Confidence 3455666788999999986622 12223455666677776 9999999987 35677778888875
No 442
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=20.92 E-value=3.2e+02 Score=22.62 Aligned_cols=14 Identities=21% Similarity=0.145 Sum_probs=7.6
Q ss_pred CHHHHHHHHHHHhc
Q 022336 143 NVEGIVSSTVVFAK 156 (299)
Q Consensus 143 N~~gi~~~~~~~~~ 156 (299)
|..|...++..|+.
T Consensus 106 ~~~~g~~a~~~L~~ 119 (277)
T 3e61_A 106 HFKGGQLQAEVVRK 119 (277)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 45555555555554
No 443
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=20.89 E-value=3.2e+02 Score=21.73 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=46.7
Q ss_pred CchHHHHHHHHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCCcEEEccC-CCCHHHHHHHHHHhCCCCCcEEEEc
Q 022336 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV-KKPAGTAEEIEKHFGCQSSQLIMVD 281 (299)
Q Consensus 203 ~Pgv~e~L~~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI~vI~ha~-KKP~p~le~alk~lGi~PeEiamVG 281 (299)
..++.+.++++.+. .+|.|.|-+......=+.-.+++.+++.+|+++..... ..| ....++.+..|...==+++||
T Consensus 21 ~~~~~~~v~~~i~~--~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~d~-~~~~~L~~~~G~~tvP~VfI~ 97 (135)
T 2wci_A 21 MSTTIEKIQRQIAE--NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNP-DIRAELPKYANWPTFPQLWVD 97 (135)
T ss_dssp CCHHHHHHHHHHHH--CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGGCH-HHHHHHHHHHTCCSSCEEEET
T ss_pred hHHHHHHHHHHhcc--CCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCCCH-HHHHHHHHHHCCCCcCEEEEC
Confidence 45677888887765 47888876310000112346899999999997543322 222 223444455576555578888
Q ss_pred CCc
Q 022336 282 MCR 284 (299)
Q Consensus 282 Drl 284 (299)
+..
T Consensus 98 G~~ 100 (135)
T 2wci_A 98 GEL 100 (135)
T ss_dssp TEE
T ss_pred CEE
Confidence 764
No 444
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=20.87 E-value=3.3e+02 Score=21.91 Aligned_cols=44 Identities=18% Similarity=0.130 Sum_probs=29.4
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.++...+.+|++|.+- |+ ....+.++++++..+.+++++|...
T Consensus 42 ~~~~~~~~dlvllD~~l----~~-----~~g~~~~~~l~~~~~~~ii~lt~~~ 85 (230)
T 2oqr_A 42 AEFDRAGADIVLLDLML----PG-----MSGTDVCKQLRARSSVPVIMVTARD 85 (230)
T ss_dssp HHHHHHCCSEEEEESSC----SS-----SCHHHHHHHHHHHCSCSEEEEECCH
T ss_pred HHHhccCCCEEEEECCC----CC-----CCHHHHHHHHHcCCCCCEEEEeCCC
Confidence 34556788999999862 22 1234566666654467999999875
No 445
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=20.72 E-value=1.5e+02 Score=27.80 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=35.7
Q ss_pred CCCCHHHH---HHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCC
Q 022336 171 RYIDWAEL---QRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNS 227 (299)
Q Consensus 171 ~~Id~~~L---k~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNn 227 (299)
-.++.+.| -+.|+|+||+-= -+.-.+.+...+.|+++.++ |+.|+++|--
T Consensus 231 pG~~~~~l~~~~~~g~~GiVle~------~G~Gn~p~~~~~~l~~a~~~-Gi~VV~~Sr~ 283 (337)
T 4pga_A 231 GNVTDTAYKALAQNGAKALIHAG------TGNGSVSSRVVPALQQLRKN-GTQIIRSSHV 283 (337)
T ss_dssp TTCCSHHHHHHHHTTCSEEEEEE------BTTTBCCTTTHHHHHHHHHT-TCEEEEEESC
T ss_pred CCCCHHHHHHHHhcCCCEEEEEE------eCCCCCCHHHHHHHHHHHHC-CCEEEEeccC
Confidence 44555444 468999999863 23334456788999999887 9999999865
No 446
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=20.70 E-value=2.2e+02 Score=24.72 Aligned_cols=50 Identities=16% Similarity=0.152 Sum_probs=30.3
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
+.|++.|+..|++|.+-. .+....+ ..+...+.+.|.+. |. +|++++...
T Consensus 133 ~~l~~~~iPvV~~~~~~~--~~~~~~V~~D~~~~~~~a~~~L~~~-G~~~I~~i~~~~ 187 (332)
T 2hsg_A 133 EELKKSPVPVVLAASIES--TNQIPSVTIDYEQAAFDAVQSLIDS-GHKNIAFVSGTL 187 (332)
T ss_dssp HHHTTSSSCEEEESCCCS--CTTSCEEEECHHHHHHHHHHHHHTT-TCSCEEEEESCT
T ss_pred HHHHhCCCCEEEEccccC--CCCCCEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCCc
Confidence 456678999999986421 1111111 23445566677776 76 699998764
No 447
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=20.66 E-value=2.7e+02 Score=20.75 Aligned_cols=44 Identities=9% Similarity=-0.053 Sum_probs=30.0
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.++...+.+|++|.+- ++ ....+.++++++.. ..+|+++|...
T Consensus 55 ~~l~~~~~dlii~d~~l----~~-----~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 55 ELIKAHLPDVALLDYRM----PG-----MDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp HHHHHHCCSEEEEETTC----SS-----SCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHhcCCCEEEEeCCC----CC-----CCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 45566789999999863 11 23466777777642 35799999876
No 448
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=20.57 E-value=2.3e+02 Score=23.33 Aligned_cols=44 Identities=11% Similarity=-0.016 Sum_probs=30.7
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhCCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~fGikVaIVSNna 228 (299)
+.++...+.+|++|.+= |+ ....+.++++++..+.+++++|...
T Consensus 43 ~~l~~~~~dlvilD~~l----~~-----~~g~~~~~~lr~~~~~~ii~lt~~~ 86 (238)
T 2gwr_A 43 TAVRELRPDLVLLDLML----PG-----MNGIDVCRVLRADSGVPIVMLTAKT 86 (238)
T ss_dssp HHHHHHCCSEEEEESSC----SS-----SCHHHHHHHHHTTCCCCEEEEEETT
T ss_pred HHHHhCCCCEEEEeCCC----CC-----CCHHHHHHHHHhCCCCcEEEEeCCC
Confidence 45666789999999752 11 2345677777765467899999876
No 449
>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A
Probab=20.52 E-value=3.3e+02 Score=25.16 Aligned_cols=73 Identities=15% Similarity=0.054 Sum_probs=41.2
Q ss_pred HHHHhCCCcEEEEeCCCCCCCCCccHHHHHHHHHHcCC----cEEEccCCCCH-HHHHHHHHHhCCCCCcEEEEcCCccc
Q 022336 212 QCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVIRHRVKKPA-GTAEEIEKHFGCQSSQLIMVDMCRIV 286 (299)
Q Consensus 212 ~Lke~fGikVaIVSNnaGs~~~d~~~e~a~~~lk~LGI----~vI~ha~KKP~-p~le~alk~lGi~PeEiamVGDrl~D 286 (299)
....+.+.--++||+.. + -...|+.++=.||- .-++.+.|-.. .+|++|.++|| +.-.-++|||+.--
T Consensus 170 ~i~sr~~~vNVLVTs~q-L-----VPaLaK~LLygL~~~fpieNIYSa~kiGKesCFerI~~RFG-~k~~yvvIGDG~eE 242 (274)
T 3geb_A 170 LINSRPNCVNVLVTTTQ-L-----IPALAKVLLYGLGSVFPIENIYSATKTGKESCFERIMQRFG-RKAVYVVIGDGVEE 242 (274)
T ss_dssp HHHHSTTEEEEEEESSC-H-----HHHHHHHHHTTCTTTSCGGGEEETTTTCHHHHHHHHHHHHC-TTSEEEEEESSHHH
T ss_pred hhccCCceeEEEEecCc-h-----HHHHHHHHHhhcccceecccccchhhcCHHHHHHHHHHHhC-CCceEEEECCCHHH
Confidence 33333344556777664 0 02234444444442 22344433333 36999999998 56788999998765
Q ss_pred ccccc
Q 022336 287 IFPGP 291 (299)
Q Consensus 287 I~gAn 291 (299)
=.||+
T Consensus 243 e~AAk 247 (274)
T 3geb_A 243 EQGAK 247 (274)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 450
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=20.50 E-value=1.1e+02 Score=22.69 Aligned_cols=44 Identities=11% Similarity=0.007 Sum_probs=26.5
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHh---CCCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV---FGHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~---fGikVaIVSNna 228 (299)
+.+++..+.+|++|.+-. + ....+.++++++. .+.+++++|...
T Consensus 40 ~~~~~~~~dlvi~D~~l~----~-----~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (140)
T 3n53_A 40 EQIDHHHPDLVILDMDII----G-----ENSPNLCLKLKRSKGLKNVPLILLFSSE 86 (140)
T ss_dssp HHHHHHCCSEEEEETTC---------------CHHHHHHTSTTCTTCCEEEEECC-
T ss_pred HHHhcCCCCEEEEeCCCC----C-----CcHHHHHHHHHcCcccCCCCEEEEecCC
Confidence 455677899999997621 1 1234455666653 256899999875
No 451
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=20.35 E-value=3.5e+02 Score=21.93 Aligned_cols=55 Identities=11% Similarity=0.091 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHh--CCCcEEEEeCCCCCCC-CCccHHHHHHHHHHcCCcEEEccCCCC
Q 022336 205 PLSSSIEQCKSV--FGHDIAVFSNSAGLYE-YDNDASKARKLEGKIGIKVIRHRVKKP 259 (299)
Q Consensus 205 gv~e~L~~Lke~--fGikVaIVSNnaGs~~-~d~~~e~a~~~lk~LGI~vI~ha~KKP 259 (299)
.+..|+..+++. .+.+++||-|+..+.. .....+.++.+++..+++++.-+.+..
T Consensus 116 ~~~~~~~~i~~~~~~~~piilv~NK~Dl~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~g 173 (201)
T 2ew1_A 116 CLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKES 173 (201)
T ss_dssp THHHHHHHHHHHSCTTCEEEEEEECGGGGGGCSSCHHHHHHHHHHHTCCEEECCTTTC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEECCCCccccccCHHHHHHHHHHcCCEEEEEeCCCC
Confidence 345666666543 1568999999974431 112345677778888988877655444
No 452
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=20.33 E-value=3.1e+02 Score=23.03 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=12.9
Q ss_pred HHHHHcCCcEEEEecc
Q 022336 176 AELQRRGFKGVVFDKD 191 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~D 191 (299)
+.+++.|+.+|++|.+
T Consensus 78 ~~~~~~~iPvV~~~~~ 93 (309)
T 2fvy_A 78 EKARGQNVPVVFFNKE 93 (309)
T ss_dssp HHHHTTTCCEEEESSC
T ss_pred HHHHHCCCcEEEecCC
Confidence 5667789999999875
No 453
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=20.22 E-value=3.3e+02 Score=22.62 Aligned_cols=50 Identities=20% Similarity=0.152 Sum_probs=28.5
Q ss_pred HHHHH-cCCcEEEEeccCeeecCC-Cccc----CchHHHHHHHHHHhCCC-cEEEEeCCC
Q 022336 176 AELQR-RGFKGVVFDKDNTLTAPY-SLTL----WGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~-~GIRaLVlD~DNTLT~p~-~~~l----~Pgv~e~L~~Lke~fGi-kVaIVSNna 228 (299)
+.|++ .|+..|++|.+- .... ...+ ......+.+.|.+. |. +|++++...
T Consensus 80 ~~l~~~~~iPvV~~~~~~--~~~~~~~~V~~d~~~~~~~~~~~L~~~-G~~~i~~i~~~~ 136 (289)
T 1dbq_A 80 AMLEEYRHIPMVVMDWGE--AKADFTDAVIDNAFEGGYMAGRYLIER-GHREIGVIPGPL 136 (289)
T ss_dssp HHHHHTTTSCEEEEECSS--CCSSSCEEEEECHHHHHHHHHHHHHHT-TCCSEEEECCC-
T ss_pred HHHHhccCCCEEEEccCC--CccCcCCEEEeCcHHHHHHHHHHHHHC-CCCeEEEEecCC
Confidence 45555 799999998642 1011 1111 12344556667765 65 699998764
No 454
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=20.06 E-value=2.6e+02 Score=20.35 Aligned_cols=44 Identities=7% Similarity=0.047 Sum_probs=29.1
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.++...+.+|++|.+- |+ ....+.++++++.. +.+++++|+..
T Consensus 43 ~~~~~~~~dlvilD~~l----p~-----~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 43 KLIEEYNPNVVILDIEM----PG-----MTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HHHHHHCCSEEEECSSC----SS-----SCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHhhcCCCEEEEecCC----CC-----CCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 34556678999999863 22 12356677776642 46899999876
No 455
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=20.06 E-value=3.7e+02 Score=22.21 Aligned_cols=44 Identities=7% Similarity=-0.024 Sum_probs=30.5
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.++...+.+|++|++= |+ ....+.++++++.. ..+|+++|...
T Consensus 61 ~~~~~~~~dlvllD~~l----p~-----~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 61 DRARETRPDAVILDVXM----PG-----MDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHCCSEEEEESCC----SS-----SCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHhCCCCEEEEeCCC----CC-----CCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 44566789999999761 22 23567777777652 46899999876
No 456
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=20.00 E-value=2.5e+02 Score=20.18 Aligned_cols=44 Identities=16% Similarity=0.030 Sum_probs=30.1
Q ss_pred HHHHHcCCcEEEEeccCeeecCCCcccCchHHHHHHHHHHhC-CCcEEEEeCCC
Q 022336 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSA 228 (299)
Q Consensus 176 ~~Lk~~GIRaLVlD~DNTLT~p~~~~l~Pgv~e~L~~Lke~f-GikVaIVSNna 228 (299)
+.+++..+.+|++|.+- ++ ....+.++++++.. +.+++++|...
T Consensus 40 ~~~~~~~~dlii~d~~l----~~-----~~g~~~~~~l~~~~~~~~ii~~s~~~ 84 (134)
T 3f6c_A 40 QRVETLKPDIVIIDVDI----PG-----VNGIQVLETLRKRQYSGIIIIVSAKN 84 (134)
T ss_dssp HHHHHHCCSEEEEETTC----SS-----SCHHHHHHHHHHTTCCSEEEEEECC-
T ss_pred HHHHhcCCCEEEEecCC----CC-----CChHHHHHHHHhcCCCCeEEEEeCCC
Confidence 56677889999999863 11 33456777777642 35799999876
Done!