Query 022338
Match_columns 298
No_of_seqs 175 out of 333
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 02:46:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022338.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022338hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 4E-106 9E-111 753.5 14.8 298 1-298 104-402 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 2.2E-86 4.8E-91 638.4 23.2 277 1-282 82-361 (361)
3 PF00326 Peptidase_S9: Prolyl 94.6 0.032 6.9E-07 49.0 3.3 69 23-91 14-83 (213)
4 PRK10566 esterase; Provisional 92.6 0.26 5.7E-06 43.8 5.7 53 56-112 91-143 (249)
5 PF07859 Abhydrolase_3: alpha/ 91.7 0.32 7E-06 42.2 5.1 43 53-96 49-95 (211)
6 PF00135 COesterase: Carboxyle 91.6 0.24 5.1E-06 49.2 4.6 42 51-92 184-228 (535)
7 COG1506 DAP2 Dipeptidyl aminop 89.6 0.2 4.4E-06 52.1 2.2 109 54-177 455-563 (620)
8 PF01764 Lipase_3: Lipase (cla 89.5 1.5 3.3E-05 35.5 6.9 40 71-110 63-103 (140)
9 cd00312 Esterase_lipase Estera 88.2 0.71 1.5E-05 46.0 4.9 41 52-92 153-196 (493)
10 PF12695 Abhydrolase_5: Alpha/ 88.2 0.6 1.3E-05 37.5 3.6 40 51-91 41-80 (145)
11 PRK10115 protease 2; Provision 87.8 0.37 8.1E-06 50.8 2.7 36 52-87 504-539 (686)
12 PLN02408 phospholipase A1 87.3 3.7 8E-05 40.4 9.1 63 60-129 188-251 (365)
13 TIGR01840 esterase_phb esteras 87.0 0.91 2E-05 40.0 4.4 37 54-90 77-113 (212)
14 COG0657 Aes Esterase/lipase [L 86.7 1.4 3.1E-05 41.1 5.8 42 55-96 132-176 (312)
15 PLN02454 triacylglycerol lipas 86.1 8 0.00017 38.7 10.8 64 60-130 216-282 (414)
16 PLN02802 triacylglycerol lipas 83.9 6.2 0.00014 40.4 9.1 51 72-128 330-380 (509)
17 PRK10162 acetyl esterase; Prov 83.9 1.8 3.8E-05 41.0 5.0 45 52-96 131-178 (318)
18 cd00707 Pancreat_lipase_like P 82.7 3.8 8.2E-05 38.2 6.6 55 56-114 96-151 (275)
19 cd00519 Lipase_3 Lipase (class 82.4 4.7 0.0001 36.0 6.9 39 71-110 127-165 (229)
20 PF00756 Esterase: Putative es 82.3 1.3 2.8E-05 39.5 3.2 42 55-97 98-140 (251)
21 PRK05077 frsA fermentation/res 81.8 5 0.00011 39.7 7.4 36 53-88 246-281 (414)
22 PRK13604 luxD acyl transferase 81.1 3.3 7.2E-05 39.7 5.6 51 51-112 90-141 (307)
23 cd00741 Lipase Lipase. Lipase 80.3 3.1 6.7E-05 34.7 4.7 28 70-97 26-53 (153)
24 TIGR03712 acc_sec_asp2 accesso 79.2 0.92 2E-05 46.1 1.2 26 67-93 353-378 (511)
25 PLN03037 lipase class 3 family 79.2 10 0.00022 39.0 8.7 55 70-130 316-370 (525)
26 PRK10439 enterobactin/ferric e 79.1 2.7 5.8E-05 41.8 4.5 44 54-97 264-313 (411)
27 PF10340 DUF2424: Protein of u 78.7 4.9 0.00011 39.7 6.0 39 55-95 180-218 (374)
28 cd07224 Pat_like Patatin-like 78.4 2.5 5.5E-05 38.5 3.8 32 59-91 17-48 (233)
29 TIGR02821 fghA_ester_D S-formy 77.8 2.8 6E-05 38.7 3.9 23 70-92 136-158 (275)
30 cd07198 Patatin Patatin-like p 77.4 2.9 6.3E-05 35.9 3.7 31 58-91 15-45 (172)
31 PF02230 Abhydrolase_2: Phosph 76.6 4.7 0.0001 35.6 4.9 35 55-90 89-123 (216)
32 PF12242 Eno-Rase_NADH_b: NAD( 75.8 4.3 9.4E-05 31.3 3.8 48 53-105 20-69 (78)
33 PF05728 UPF0227: Uncharacteri 75.8 6 0.00013 35.1 5.4 37 56-98 45-81 (187)
34 KOG1515 Arylacetamide deacetyl 75.6 7.4 0.00016 37.8 6.3 69 48-117 142-211 (336)
35 COG1770 PtrB Protease II [Amin 75.4 2.8 6.2E-05 44.0 3.6 35 51-85 506-540 (682)
36 PF10503 Esterase_phd: Esteras 75.3 4.1 8.8E-05 37.2 4.2 41 55-99 80-120 (220)
37 cd07222 Pat_PNPLA4 Patatin-lik 73.6 3.6 7.8E-05 37.8 3.5 32 59-90 17-49 (246)
38 PF03583 LIP: Secretory lipase 73.0 7.9 0.00017 36.4 5.7 63 51-114 43-114 (290)
39 cd07204 Pat_PNPLA_like Patatin 71.2 4.8 0.0001 36.9 3.7 32 59-90 17-49 (243)
40 PLN02442 S-formylglutathione h 70.4 6 0.00013 36.8 4.2 22 70-91 141-162 (283)
41 PLN02310 triacylglycerol lipas 70.3 26 0.00056 35.0 8.8 52 71-129 208-259 (405)
42 TIGR03100 hydr1_PEP hydrolase, 69.9 8.4 0.00018 35.4 5.1 36 54-90 83-118 (274)
43 cd07218 Pat_iPLA2 Calcium-inde 69.8 5.6 0.00012 36.7 3.8 31 59-90 18-48 (245)
44 PF00975 Thioesterase: Thioest 69.5 21 0.00045 31.1 7.3 52 55-109 51-102 (229)
45 PLN02298 hydrolase, alpha/beta 69.4 15 0.00033 34.2 6.8 45 54-102 116-160 (330)
46 KOG1209 1-Acyl dihydroxyaceton 68.2 12 0.00026 34.8 5.5 66 68-133 4-76 (289)
47 PF07819 PGAP1: PGAP1-like pro 68.2 7.8 0.00017 35.1 4.4 35 55-89 65-102 (225)
48 COG2272 PnbA Carboxylesterase 68.1 6 0.00013 40.3 3.9 37 51-87 156-195 (491)
49 PLN02324 triacylglycerol lipas 68.0 33 0.00072 34.4 9.0 36 60-96 203-239 (415)
50 KOG4627 Kynurenine formamidase 67.8 6.1 0.00013 36.4 3.5 29 60-89 125-153 (270)
51 PF08840 BAAT_C: BAAT / Acyl-C 66.7 12 0.00026 33.5 5.2 56 55-114 5-60 (213)
52 KOG4569 Predicted lipase [Lipi 65.8 29 0.00062 33.5 8.0 67 56-130 157-224 (336)
53 PF12697 Abhydrolase_6: Alpha/ 64.8 24 0.00052 29.1 6.5 37 72-112 66-102 (228)
54 PF12740 Chlorophyllase2: Chlo 63.1 8.9 0.00019 36.0 3.8 39 54-93 65-112 (259)
55 PLN00021 chlorophyllase 61.8 13 0.00028 35.5 4.8 39 56-94 102-148 (313)
56 cd07207 Pat_ExoU_VipD_like Exo 61.4 11 0.00023 32.6 3.8 31 57-90 15-45 (194)
57 PLN02211 methyl indole-3-aceta 61.3 23 0.0005 32.5 6.2 24 68-91 83-106 (273)
58 PRK11460 putative hydrolase; P 61.2 13 0.00029 33.4 4.5 30 58-88 89-119 (232)
59 PF06028 DUF915: Alpha/beta hy 61.0 22 0.00049 33.1 6.1 61 50-114 83-145 (255)
60 KOG1516 Carboxylesterase and r 60.7 13 0.00029 37.5 4.9 35 55-89 175-212 (545)
61 TIGR03695 menH_SHCHC 2-succiny 60.4 19 0.0004 30.3 5.1 23 70-92 68-90 (251)
62 COG4814 Uncharacterized protei 59.4 11 0.00024 35.6 3.6 45 53-99 119-165 (288)
63 TIGR03056 bchO_mg_che_rel puta 59.3 25 0.00053 31.0 5.9 35 71-109 94-128 (278)
64 PRK10673 acyl-CoA esterase; Pr 59.3 21 0.00045 31.3 5.4 36 71-110 80-115 (255)
65 PLN02753 triacylglycerol lipas 58.7 52 0.0011 34.0 8.6 53 71-129 311-369 (531)
66 PLN02965 Probable pheophorbida 58.6 25 0.00054 31.4 5.8 38 68-109 68-105 (255)
67 PLN02571 triacylglycerol lipas 58.6 19 0.00042 36.0 5.4 39 58-96 209-250 (413)
68 PF00450 Peptidase_S10: Serine 58.2 38 0.00082 32.5 7.4 90 16-107 76-175 (415)
69 PF08237 PE-PPE: PE-PPE domain 56.8 35 0.00077 31.1 6.5 55 51-109 31-88 (225)
70 TIGR03230 lipo_lipase lipoprot 56.6 30 0.00066 34.9 6.5 55 55-114 102-158 (442)
71 PRK10349 carboxylesterase BioH 56.6 29 0.00062 30.7 5.8 49 55-110 60-108 (256)
72 TIGR03101 hydr2_PEP hydrolase, 56.3 23 0.0005 33.1 5.3 32 56-90 86-117 (266)
73 cd07220 Pat_PNPLA2 Patatin-lik 56.2 13 0.00029 34.4 3.7 31 59-89 22-53 (249)
74 PF05677 DUF818: Chlamydia CHL 56.1 25 0.00055 34.5 5.6 53 56-111 198-254 (365)
75 PF01738 DLH: Dienelactone hyd 56.0 16 0.00035 31.9 4.1 37 53-89 79-115 (218)
76 PLN00413 triacylglycerol lipas 55.9 19 0.00041 36.7 4.9 35 59-95 273-307 (479)
77 PRK04940 hypothetical protein; 55.0 24 0.00052 31.3 4.9 23 72-98 60-82 (180)
78 KOG2237 Predicted serine prote 55.0 11 0.00023 39.8 3.0 35 51-85 528-562 (712)
79 PLN02894 hydrolase, alpha/beta 55.0 36 0.00079 33.3 6.7 40 71-114 175-215 (402)
80 PLN02719 triacylglycerol lipas 54.7 25 0.00054 36.2 5.5 53 71-129 297-355 (518)
81 TIGR01738 bioH putative pimelo 54.4 28 0.00061 29.3 5.2 51 55-112 51-101 (245)
82 TIGR02240 PHA_depoly_arom poly 54.3 22 0.00048 32.0 4.8 36 71-110 90-125 (276)
83 cd07230 Pat_TGL4-5_like Triacy 54.3 15 0.00033 36.7 4.0 31 58-91 90-120 (421)
84 KOG1553 Predicted alpha/beta h 52.9 28 0.00061 34.5 5.4 80 45-133 284-364 (517)
85 PRK00870 haloalkane dehalogena 52.8 61 0.0013 29.6 7.5 37 71-111 114-150 (302)
86 cd07205 Pat_PNPLA6_PNPLA7_NTE1 52.7 20 0.00043 30.5 4.0 32 56-90 15-46 (175)
87 TIGR03611 RutD pyrimidine util 52.5 23 0.0005 30.3 4.4 21 71-91 79-99 (257)
88 cd07228 Pat_NTE_like_bacteria 52.0 21 0.00046 30.6 4.1 29 58-89 17-45 (175)
89 cd07210 Pat_hypo_W_succinogene 51.8 19 0.00041 32.6 3.8 30 58-90 17-46 (221)
90 TIGR00976 /NonD putative hydro 51.7 20 0.00044 36.6 4.5 37 53-90 79-115 (550)
91 PF03575 Peptidase_S51: Peptid 51.5 16 0.00035 30.8 3.2 11 74-84 70-80 (154)
92 PLN02733 phosphatidylcholine-s 50.7 30 0.00065 34.8 5.4 34 55-90 147-180 (440)
93 COG0412 Dienelactone hydrolase 50.5 24 0.00053 32.1 4.4 41 53-93 93-133 (236)
94 KOG1552 Predicted alpha/beta h 49.9 26 0.00056 33.0 4.4 93 53-178 112-205 (258)
95 PF01734 Patatin: Patatin-like 49.9 12 0.00027 30.7 2.2 17 74-90 29-45 (204)
96 PLN02824 hydrolase, alpha/beta 49.5 51 0.0011 29.9 6.4 34 72-109 102-135 (294)
97 KOG3101 Esterase D [General fu 48.7 6.7 0.00014 36.3 0.4 36 53-88 117-157 (283)
98 COG1752 RssA Predicted esteras 48.6 20 0.00043 33.8 3.6 30 59-91 29-58 (306)
99 PLN02847 triacylglycerol lipas 48.6 46 0.00099 35.1 6.4 24 72-95 251-274 (633)
100 cd01819 Patatin_and_cPLA2 Pata 48.4 26 0.00057 29.6 4.0 34 56-90 13-46 (155)
101 PF01083 Cutinase: Cutinase; 47.9 70 0.0015 27.8 6.8 41 50-92 61-101 (179)
102 PLN02162 triacylglycerol lipas 47.3 34 0.00074 34.9 5.1 37 58-96 266-302 (475)
103 PF00561 Abhydrolase_1: alpha/ 47.2 40 0.00088 28.4 5.1 38 53-92 27-64 (230)
104 cd07209 Pat_hypo_Ecoli_Z1214_l 47.2 23 0.0005 31.6 3.6 29 59-90 16-44 (215)
105 PF03403 PAF-AH_p_II: Platelet 46.6 11 0.00024 37.0 1.6 17 71-87 227-243 (379)
106 cd07213 Pat17_PNPLA8_PNPLA9_li 46.6 31 0.00067 32.2 4.6 39 51-90 13-52 (288)
107 PLN02934 triacylglycerol lipas 46.3 38 0.00083 34.9 5.4 39 55-95 306-344 (515)
108 COG3509 LpqC Poly(3-hydroxybut 46.3 22 0.00047 34.2 3.4 33 55-87 127-159 (312)
109 PF05057 DUF676: Putative seri 45.7 18 0.00039 32.3 2.8 47 47-94 54-100 (217)
110 cd07225 Pat_PNPLA6_PNPLA7 Pata 45.3 24 0.00053 33.6 3.7 31 58-91 32-62 (306)
111 cd07206 Pat_TGL3-4-5_SDP1 Tria 44.7 28 0.00061 33.3 4.0 30 59-91 87-116 (298)
112 cd07208 Pat_hypo_Ecoli_yjju_li 44.6 26 0.00057 32.1 3.7 31 57-89 14-44 (266)
113 TIGR02427 protocat_pcaD 3-oxoa 44.1 35 0.00077 28.7 4.2 21 71-91 78-98 (251)
114 PF00091 Tubulin: Tubulin/FtsZ 43.8 68 0.0015 28.6 6.2 47 54-100 105-156 (216)
115 PF11288 DUF3089: Protein of u 43.8 34 0.00073 31.1 4.1 64 21-85 42-108 (207)
116 TIGR03343 biphenyl_bphD 2-hydr 43.6 52 0.0011 29.3 5.4 23 70-92 99-121 (282)
117 TIGR03739 PRTRC_D PRTRC system 43.2 45 0.00097 31.6 5.1 34 69-108 272-305 (320)
118 PRK10279 hypothetical protein; 43.1 28 0.0006 33.2 3.7 29 59-90 23-51 (300)
119 COG1075 LipA Predicted acetylt 43.1 66 0.0014 30.9 6.3 45 47-98 105-149 (336)
120 cd07231 Pat_SDP1-like Sugar-De 42.6 32 0.00069 33.4 4.0 30 59-91 86-115 (323)
121 TIGR01392 homoserO_Ac_trn homo 40.6 65 0.0014 30.5 5.8 38 72-113 126-164 (351)
122 KOG2564 Predicted acetyltransf 39.9 44 0.00096 32.2 4.4 37 58-99 135-171 (343)
123 PF06500 DUF1100: Alpha/beta h 39.6 35 0.00076 34.2 3.9 35 53-87 242-276 (411)
124 PRK10749 lysophospholipase L2; 39.0 1E+02 0.0023 28.8 6.9 21 71-91 130-150 (330)
125 PLN02761 lipase class 3 family 38.9 67 0.0014 33.2 5.8 54 71-130 293-353 (527)
126 KOG1282 Serine carboxypeptidas 38.8 65 0.0014 32.7 5.7 94 14-109 106-209 (454)
127 PF09752 DUF2048: Uncharacteri 38.4 65 0.0014 31.6 5.4 37 57-100 163-199 (348)
128 PF05448 AXE1: Acetyl xylan es 37.6 26 0.00056 33.6 2.5 118 45-177 147-274 (320)
129 PRK11071 esterase YqiA; Provis 37.3 60 0.0013 28.2 4.7 34 55-90 46-79 (190)
130 KOG4409 Predicted hydrolase/ac 37.3 74 0.0016 31.4 5.6 54 56-116 147-200 (365)
131 PLN02578 hydrolase 37.2 1.1E+02 0.0023 29.2 6.7 39 71-113 151-190 (354)
132 PF11187 DUF2974: Protein of u 37.2 95 0.002 28.2 6.1 25 73-97 85-109 (224)
133 PRK10985 putative hydrolase; P 37.2 1.3E+02 0.0028 28.1 7.3 34 54-89 115-148 (324)
134 cd07227 Pat_Fungal_NTE1 Fungal 37.1 40 0.00087 31.6 3.7 30 59-91 28-57 (269)
135 cd07232 Pat_PLPL Patain-like p 37.1 39 0.00084 33.7 3.8 31 58-91 84-114 (407)
136 PF06821 Ser_hydrolase: Serine 36.9 92 0.002 26.9 5.7 20 72-91 55-74 (171)
137 cd07221 Pat_PNPLA3 Patatin-lik 36.8 41 0.00088 31.2 3.7 32 59-90 18-50 (252)
138 CHL00024 psbI photosystem II p 36.3 21 0.00045 23.5 1.1 12 8-19 21-32 (36)
139 cd07229 Pat_TGL3_like Triacylg 36.2 43 0.00092 33.3 3.9 30 59-91 101-130 (391)
140 PRK03204 haloalkane dehalogena 35.9 77 0.0017 29.0 5.4 52 54-111 85-136 (286)
141 PRK02655 psbI photosystem II r 35.9 21 0.00046 23.7 1.1 12 8-19 21-32 (38)
142 COG4947 Uncharacterized protei 35.7 23 0.00051 31.8 1.7 23 73-99 102-124 (227)
143 TIGR01250 pro_imino_pep_2 prol 35.1 88 0.0019 27.1 5.4 21 71-91 95-115 (288)
144 PF02450 LCAT: Lecithin:choles 35.1 52 0.0011 32.3 4.3 36 56-94 106-141 (389)
145 PF00151 Lipase: Lipase; Inte 35.0 88 0.0019 30.2 5.8 65 48-116 119-193 (331)
146 KOG4389 Acetylcholinesterase/B 34.9 40 0.00086 34.8 3.4 39 51-89 194-235 (601)
147 COG0031 CysK Cysteine synthase 34.5 1.3E+02 0.0029 28.8 6.8 58 46-111 237-295 (300)
148 PRK13917 plasmid segregation p 34.2 1E+02 0.0023 29.6 6.2 27 68-99 289-315 (344)
149 PRK08775 homoserine O-acetyltr 34.1 80 0.0017 29.8 5.3 35 72-110 138-172 (343)
150 COG2939 Carboxypeptidase C (ca 34.1 2.2E+02 0.0047 29.4 8.5 91 16-111 137-241 (498)
151 PF04260 DUF436: Protein of un 34.0 45 0.00098 29.4 3.2 26 56-81 3-28 (172)
152 TIGR01836 PHA_synth_III_C poly 33.9 49 0.0011 31.4 3.8 34 55-90 121-154 (350)
153 PRK03592 haloalkane dehalogena 33.5 1.4E+02 0.0029 27.1 6.6 34 72-109 93-126 (295)
154 COG0596 MhpC Predicted hydrola 33.3 1.1E+02 0.0023 25.2 5.4 22 74-95 90-111 (282)
155 cd07212 Pat_PNPLA9 Patatin-lik 33.1 63 0.0014 30.8 4.4 36 55-90 13-50 (312)
156 PLN02872 triacylglycerol lipas 32.5 71 0.0015 31.5 4.8 34 51-87 142-175 (395)
157 PLN02385 hydrolase; alpha/beta 31.6 83 0.0018 29.7 5.0 18 72-89 162-179 (349)
158 COG2945 Predicted hydrolase of 31.6 60 0.0013 29.5 3.7 37 53-90 85-121 (210)
159 PRK06489 hypothetical protein; 30.9 1.2E+02 0.0025 28.9 5.9 19 72-90 153-172 (360)
160 PRK00175 metX homoserine O-ace 30.8 1.2E+02 0.0026 29.3 6.0 49 58-112 134-183 (379)
161 COG1505 Serine proteases of th 30.6 24 0.00051 37.1 1.1 35 50-84 478-512 (648)
162 KOG4391 Predicted alpha/beta h 30.5 17 0.00037 33.8 0.1 43 54-96 131-173 (300)
163 PF08538 DUF1749: Protein of u 30.3 84 0.0018 30.2 4.7 67 23-95 63-131 (303)
164 PF12715 Abhydrolase_7: Abhydr 30.2 48 0.001 33.0 3.1 56 50-112 202-259 (390)
165 PRK11126 2-succinyl-6-hydroxy- 29.3 98 0.0021 26.8 4.7 21 71-91 65-85 (242)
166 KOG2183 Prolylcarboxypeptidase 29.1 87 0.0019 31.8 4.6 59 47-109 135-208 (492)
167 cd07219 Pat_PNPLA1 Patatin-lik 29.0 63 0.0014 32.1 3.7 32 59-90 30-62 (382)
168 COG4099 Predicted peptidase [G 28.6 99 0.0022 30.2 4.8 42 55-97 252-294 (387)
169 KOG3724 Negative regulator of 28.6 76 0.0016 34.6 4.4 19 68-86 178-196 (973)
170 PF10230 DUF2305: Uncharacteri 28.5 61 0.0013 30.0 3.4 15 70-84 82-96 (266)
171 PHA02857 monoglyceride lipase; 28.5 1.1E+02 0.0023 27.4 4.9 21 71-91 96-116 (276)
172 COG4188 Predicted dienelactone 28.3 64 0.0014 31.8 3.6 35 54-88 134-175 (365)
173 PLN02511 hydrolase 28.3 81 0.0017 30.7 4.3 37 53-91 156-192 (388)
174 PRK07581 hypothetical protein; 27.9 1E+02 0.0022 28.8 4.8 25 72-96 123-148 (339)
175 KOG1454 Predicted hydrolase/ac 27.9 1.8E+02 0.0039 27.8 6.6 49 50-105 109-157 (326)
176 cd07386 MPP_DNA_pol_II_small_a 27.6 1.8E+02 0.0039 26.1 6.3 32 52-83 15-48 (243)
177 PLN02652 hydrolase; alpha/beta 27.4 99 0.0021 30.4 4.8 34 55-90 193-226 (395)
178 PF02532 PsbI: Photosystem II 27.2 25 0.00054 23.1 0.4 12 8-19 21-32 (36)
179 PRK11761 cysM cysteine synthas 27.1 1.1E+02 0.0024 28.7 5.0 37 72-111 250-286 (296)
180 PRK04123 ribulokinase; Provisi 26.7 1.3E+02 0.0028 30.7 5.7 67 26-101 379-467 (548)
181 PRK13690 hypothetical protein; 26.7 86 0.0019 28.0 3.7 28 54-81 8-35 (184)
182 COG2382 Fes Enterochelin ester 26.7 97 0.0021 29.8 4.4 65 49-118 148-218 (299)
183 TIGR01440 conserved hypothetic 25.4 78 0.0017 28.0 3.2 27 55-81 2-28 (172)
184 PF02129 Peptidase_S15: X-Pro 24.8 92 0.002 28.4 3.9 38 53-91 83-120 (272)
185 TIGR01138 cysM cysteine syntha 24.4 1.3E+02 0.0028 28.2 4.8 49 55-111 234-282 (290)
186 PLN03087 BODYGUARD 1 domain co 24.2 2.2E+02 0.0048 29.0 6.7 40 71-114 273-312 (481)
187 cd07390 MPP_AQ1575 Aquifex aeo 24.2 62 0.0013 27.5 2.4 51 31-82 2-54 (168)
188 PF09949 DUF2183: Uncharacteri 24.1 2.9E+02 0.0062 22.0 6.1 55 54-110 10-74 (100)
189 PF13241 NAD_binding_7: Putati 23.7 1.9E+02 0.0041 22.5 5.0 34 71-110 7-40 (103)
190 PF05577 Peptidase_S28: Serine 23.7 1.7E+02 0.0036 28.7 5.7 43 70-117 111-153 (434)
191 smart00824 PKS_TE Thioesterase 23.7 3.6E+02 0.0077 22.1 7.0 38 71-109 63-100 (212)
192 COG2021 MET2 Homoserine acetyl 23.5 1.4E+02 0.003 29.6 4.8 44 54-99 131-178 (368)
193 PF13173 AAA_14: AAA domain 23.5 92 0.002 25.0 3.2 28 55-84 75-102 (128)
194 PF11144 DUF2920: Protein of u 23.3 1.2E+02 0.0026 30.4 4.4 40 68-113 180-220 (403)
195 PRK05855 short chain dehydroge 23.2 1.2E+02 0.0026 30.2 4.6 17 162-178 230-246 (582)
196 COG3458 Acetyl esterase (deace 23.0 1.3E+02 0.0027 29.0 4.3 40 43-85 146-189 (321)
197 PTZ00387 epsilon tubulin; Prov 22.9 1.4E+02 0.0031 30.3 5.0 54 46-100 104-163 (465)
198 smart00704 ZnF_CDGSH CDGSH-typ 22.6 34 0.00075 22.6 0.4 6 30-35 26-31 (38)
199 cd07223 Pat_PNPLA5-mammals Pat 22.5 55 0.0012 32.7 1.9 16 75-90 44-59 (405)
200 KOG2281 Dipeptidyl aminopeptid 22.5 73 0.0016 34.1 2.9 29 60-88 714-743 (867)
201 COG2267 PldB Lysophospholipase 22.3 1.6E+02 0.0035 27.7 5.1 60 51-116 84-145 (298)
202 COG0431 Predicted flavoprotein 22.1 82 0.0018 27.5 2.8 52 46-98 75-127 (184)
203 COG0627 Predicted esterase [Ge 21.7 74 0.0016 30.6 2.6 51 57-112 131-187 (316)
204 PLN02679 hydrolase, alpha/beta 21.6 1.6E+02 0.0036 28.0 5.0 17 72-88 155-171 (360)
205 PF08121 Toxin_33: Waglerin fa 21.5 49 0.0011 19.0 0.8 11 286-296 7-17 (22)
206 KOG2984 Predicted hydrolase [G 21.2 26 0.00056 32.4 -0.6 21 158-178 209-229 (277)
207 cd06377 PBP1_iGluR_NMDA_NR3 N- 21.1 1.7E+02 0.0037 29.0 5.1 78 21-108 148-241 (382)
208 KOG2882 p-Nitrophenyl phosphat 21.0 3.7E+02 0.008 26.0 7.0 77 27-111 24-117 (306)
209 PF07224 Chlorophyllase: Chlor 20.5 1.2E+02 0.0025 29.2 3.5 37 54-91 94-139 (307)
210 PF01674 Lipase_2: Lipase (cla 20.1 65 0.0014 29.3 1.8 57 31-90 30-93 (219)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=4.1e-106 Score=753.53 Aligned_cols=298 Identities=71% Similarity=1.268 Sum_probs=292.7
Q ss_pred CCCcccccccCCCCCCCCCCCccccEEEEeCCCCCcccccCCCCCC-eeEEeHHHHHHHHHHHHHHhCCCCcCeeEEeee
Q 022338 1 MEKQLPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQNEGA-QLYFRGQRIWLTAMQDLMAKGMQNADQALLSGC 79 (298)
Q Consensus 1 m~~~~~~~Gils~~~~~NP~f~~wn~V~vpYC~Gd~~~G~~~~~~~-~l~frG~~i~~avl~~l~~~~~~~a~~vilsG~ 79 (298)
|||++.|+||||+++++||||||||+|+||||||++|+|+.+.++. .++|||++||+|||++|+++||.+|+++||+||
T Consensus 104 mek~~~FtGILS~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~t~l~fRG~rIw~av~~eLl~kGms~Ak~alLsGc 183 (402)
T KOG4287|consen 104 MEKELAFTGILSNKPSENPDFYNWNRVKVRYCDGASFSGDSENKNATQLQFRGARIWLAVMDELLAKGMSNAKQALLSGC 183 (402)
T ss_pred chhhcceeEEecCCcccCCcccccceeEEeecCCCcccCcccccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHhhcC
Confidence 8999999999999999999999999999999999999999986544 999999999999999999999999999999999
Q ss_pred ChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHHHHHHHhhhccccCCcccccCCCCCCCccchh
Q 022338 80 SAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVVSLQEVQKNLPITCTSQLDPTSCFFPQN 159 (298)
Q Consensus 80 SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~~l~~~~~~lp~~C~~~~~~~~C~f~~~ 159 (298)
||||+|+++|+|++|++||++++|+||+|||||||.+|++|...++.+|.+++++|++.++||+.|++.++|++|||||+
T Consensus 184 SAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~~CfFpq~ 263 (402)
T KOG4287|consen 184 SAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPSLCFFPQY 263 (402)
T ss_pred CccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCchhhcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCcchhhhhhhhhHHHHHhhcCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhhccCCCceEEEcC
Q 022338 160 LVANIKTPMFLLNAAYDAWQVQASLAPPTADPHGYWSDCKSDHAHCNSSQIQFFQDFRNQMLNAVEVFSKSNENGLFINS 239 (298)
Q Consensus 160 ~~~~i~tP~Fil~s~YD~wQl~~il~~~~~dp~~~w~~C~~~~~~C~~~q~~~iq~f~~~~l~~l~~~~~~~~~G~F~~S 239 (298)
+++.|+||+|++|++||+|||++.|+|+++||.|.|..|+++...|+++|++++|+||.+|+.+++.+..+...|+||+|
T Consensus 264 v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ml~a~~~f~~~~~~g~fins 343 (402)
T KOG4287|consen 264 VLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQMLDAVKIFSSSKQNGLFINS 343 (402)
T ss_pred HHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHHHHHHhhhheecccCCeeech
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred CcccccccccCccccCCCcccCCchHHHhhhhcccccccccccCCCCCCCCCCCCCCCC
Q 022338 240 CFAHCQSERQDTWYADDSPRIGDKGIAKSVGDWYFDRAALKAIDCPYPCDKTCRNLVFK 298 (298)
Q Consensus 240 C~~Hc~~~~~~~W~~~~~p~v~g~ti~~av~dW~~~r~~~~~iDc~yPcNptC~~~~~~ 298 (298)
|++|||.+.++||+.+++|++++++||+||+||||+|..+|+|||||||||||+|++++
T Consensus 344 c~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 344 CFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred HHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 99999999999999999999999999999999999998899999999999999999875
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=2.2e-86 Score=638.38 Aligned_cols=277 Identities=53% Similarity=1.005 Sum_probs=266.9
Q ss_pred CCCcccccccCCCCCCCCCCCccccEEEEeCCCCCcccccCC---CCCCeeEEeHHHHHHHHHHHHHHhCCCCcCeeEEe
Q 022338 1 MEKQLPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQ---NEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLS 77 (298)
Q Consensus 1 m~~~~~~~Gils~~~~~NP~f~~wn~V~vpYC~Gd~~~G~~~---~~~~~l~frG~~i~~avl~~l~~~~~~~a~~vils 77 (298)
|.+++.++||||+++++||+|+|||+|||||||||+|+|+++ +++.++||||++|++|||++|+++||++|++|||+
T Consensus 82 ~~~~~~~~Gils~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~a~~vllt 161 (361)
T PF03283_consen 82 WPKTFAFSGILSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPNAKQVLLT 161 (361)
T ss_pred hhhhccccccccCCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcccceEEEe
Confidence 456788999999999999999999999999999999999876 56789999999999999999999999999999999
Q ss_pred eeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHHHHHHHhhhccccCCcccccCCCCCCCccc
Q 022338 78 GCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVVSLQEVQKNLPITCTSQLDPTSCFFP 157 (298)
Q Consensus 78 G~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~~l~~~~~~lp~~C~~~~~~~~C~f~ 157 (298)
||||||+||++|+|+||++||+.++|++++|||||||.++++|...++.++..++++|++.+.+|++|.+.+++. ||||
T Consensus 162 G~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~~~~-C~f~ 240 (361)
T PF03283_consen 162 GCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQYDPE-CFFP 240 (361)
T ss_pred ccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhccCcc-ccch
Confidence 999999999999999999999889999999999999999999999999999999999999999999999988777 9999
Q ss_pred hhHhhccCcchhhhhhhhhHHHHHhhcCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhhccCCCceEEE
Q 022338 158 QNLVANIKTPMFLLNAAYDAWQVQASLAPPTADPHGYWSDCKSDHAHCNSSQIQFFQDFRNQMLNAVEVFSKSNENGLFI 237 (298)
Q Consensus 158 ~~~~~~i~tP~Fil~s~YD~wQl~~il~~~~~dp~~~w~~C~~~~~~C~~~q~~~iq~f~~~~l~~l~~~~~~~~~G~F~ 237 (298)
|+++|+|+||+|||||+||+|||+++|+|.. +.|.+|+.++..|+++||++||+||++|+++|+++.+++++|+|+
T Consensus 241 q~~~~~I~tPlFivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~~~~~aL~~~~~~~~~G~Fi 316 (361)
T PF03283_consen 241 QYLYPYIKTPLFIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRSEMLDALKNVSNSPNWGVFI 316 (361)
T ss_pred HHHHhhcCcceeeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEC
Confidence 9999999999999999999999999999864 899999999999999999999999999999999999999999999
Q ss_pred cCCcccccccccCccccCCCcccCCchHHHhhhhccccccccccc
Q 022338 238 NSCFAHCQSERQDTWYADDSPRIGDKGIAKSVGDWYFDRAALKAI 282 (298)
Q Consensus 238 ~SC~~Hc~~~~~~~W~~~~~p~v~g~ti~~av~dW~~~r~~~~~i 282 (298)
+||++||+++.+++|+++++|+++|+||++||+||||+|+.+|.|
T Consensus 317 ~SC~~Hcq~~~~~~W~~~~~p~v~g~tia~Av~dW~~~r~~~~~~ 361 (361)
T PF03283_consen 317 PSCFAHCQSESSDTWNSPDSPRVNGKTIAEAVGDWYFSRSEVKKI 361 (361)
T ss_pred ccchhhcccccCCcccCCCcccCCCEEHHHHHHHHHhcccccccC
Confidence 999999999999999988899999999999999999999988876
No 3
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.55 E-value=0.032 Score=49.01 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=42.8
Q ss_pred cccEEEEeCCCCCcccccCC-CCCCeeEEeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 23 NWNRVKLRYCDGASFSGDSQ-NEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 23 ~wn~V~vpYC~Gd~~~G~~~-~~~~~l~frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
.+..+.+.|--+..+..+-. .....+--....-+.+++++|.+++.-++++|.|.|.|+||+.|.+-.-
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 45667777766553321100 0011111122445677889998877789999999999999999886654
No 4
>PRK10566 esterase; Provisional
Probab=92.56 E-value=0.26 Score=43.85 Aligned_cols=53 Identities=23% Similarity=0.317 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccc
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 112 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 112 (298)
+.+++++|..++.-+.++|.|.|.|+||+-++.-. ...|.-..+..+..++++
T Consensus 91 ~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~----~~~~~~~~~~~~~~~~~~ 143 (249)
T PRK10566 91 FPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIM----ARHPWVKCVASLMGSGYF 143 (249)
T ss_pred HHHHHHHHHhcCCcCccceeEEeecccHHHHHHHH----HhCCCeeEEEEeeCcHHH
Confidence 44567777765556789999999999999887443 233431223334456554
No 5
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=91.68 E-value=0.32 Score=42.20 Aligned_cols=43 Identities=26% Similarity=0.242 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHh----CCCCcCeeEEeeeChhHHHHHHhHHHHHhh
Q 022338 53 QRIWLTAMQDLMAK----GMQNADQALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 53 ~~i~~avl~~l~~~----~~~~a~~vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
..-+.++++||+++ + -++++|+|+|.||||.=++.-+-..++.
T Consensus 49 ~~D~~~a~~~l~~~~~~~~-~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 49 LEDVKAAYRWLLKNADKLG-IDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHHHTHHHHT-EEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred ccccccceeeecccccccc-ccccceEEeecccccchhhhhhhhhhhh
Confidence 34566778888773 3 3589999999999999888888777776
No 6
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=91.57 E-value=0.24 Score=49.16 Aligned_cols=42 Identities=21% Similarity=0.102 Sum_probs=35.5
Q ss_pred eHHHHHHHHHHHHHHh--CCC-CcCeeEEeeeChhHHHHHHhHHH
Q 022338 51 RGQRIWLTAMQDLMAK--GMQ-NADQALLSGCSAGGLASILHCDE 92 (298)
Q Consensus 51 rG~~i~~avl~~l~~~--~~~-~a~~vilsG~SAGG~g~~~~~d~ 92 (298)
.|..-.+++|+|..++ .|+ ++++|.|.|.||||..+.+|.-.
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s 228 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS 228 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec
Confidence 4677888999999883 566 89999999999999998877655
No 7
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=89.63 E-value=0.2 Score=52.07 Aligned_cols=109 Identities=18% Similarity=0.171 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHHHHHHH
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVVS 133 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~~ 133 (298)
+-+.+.+++|.+.++-++++|-++|.|.||+-|++-.-.-- .+ ..+++.+|.--+...... ... .++...-.
T Consensus 455 ~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f-----~a~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ 526 (620)
T COG1506 455 EDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RF-----KAAVAVAGGVDWLLYFGE-STE-GLRFDPEE 526 (620)
T ss_pred HHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hh-----heEEeccCcchhhhhccc-cch-hhcCCHHH
Confidence 44566677776678888899999999999998876443322 22 223333331111111000 000 00100000
Q ss_pred hhhccccCCcccccCCCCCCCccchhHhhccCcchhhhhhhhhH
Q 022338 134 LQEVQKNLPITCTSQLDPTSCFFPQNLVANIKTPMFLLNAAYDA 177 (298)
Q Consensus 134 l~~~~~~lp~~C~~~~~~~~C~f~~~~~~~i~tP~Fil~s~YD~ 177 (298)
. ... +.. ..+...=.-|-...+.|++|++||++.-|.
T Consensus 527 ~---~~~-~~~---~~~~~~~~sp~~~~~~i~~P~LliHG~~D~ 563 (620)
T COG1506 527 N---GGG-PPE---DREKYEDRSPIFYADNIKTPLLLIHGEEDD 563 (620)
T ss_pred h---CCC-ccc---ChHHHHhcChhhhhcccCCCEEEEeecCCc
Confidence 0 001 111 111122334778899999999999999886
No 8
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.47 E-value=1.5 Score=35.54 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=26.3
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCC-CCceEEEeecCc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFP-KTTKVKCLSDAG 110 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp-~~~~v~~l~DsG 110 (298)
..+|+++|+|.||.=|.+-+-++.+..+ ...++++++=++
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~ 103 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGA 103 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCC
Confidence 3889999999999855555555555443 235577776544
No 9
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=88.24 E-value=0.71 Score=45.97 Aligned_cols=41 Identities=22% Similarity=0.190 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHh--CC-CCcCeeEEeeeChhHHHHHHhHHH
Q 022338 52 GQRIWLTAMQDLMAK--GM-QNADQALLSGCSAGGLASILHCDE 92 (298)
Q Consensus 52 G~~i~~avl~~l~~~--~~-~~a~~vilsG~SAGG~g~~~~~d~ 92 (298)
|..-..++|+|+.++ .+ .++++|.|.|.||||..+.++.-.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 677888889998874 23 589999999999999887766543
No 10
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=88.21 E-value=0.6 Score=37.46 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=30.3
Q ss_pred eHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 51 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 51 rG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
.+...++.+++++.. +..++++|+|.|.|+||..+..-..
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA-GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH-HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh-hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 455578888888754 2338999999999999987665444
No 11
>PRK10115 protease 2; Provisional
Probab=87.76 E-value=0.37 Score=50.83 Aligned_cols=36 Identities=25% Similarity=0.239 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHH
Q 022338 52 GQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 87 (298)
Q Consensus 52 G~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~ 87 (298)
-..-+.++.++|+++|+-++++|.+.|.||||+-+.
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~ 539 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMG 539 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHH
Confidence 355678889999999999999999999999998654
No 12
>PLN02408 phospholipase A1
Probab=87.32 E-value=3.7 Score=40.39 Aligned_cols=63 Identities=17% Similarity=0.315 Sum_probs=41.4
Q ss_pred HHHHHHhCCCC-cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHHH
Q 022338 60 MQDLMAKGMQN-ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFA 129 (298)
Q Consensus 60 l~~l~~~~~~~-a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~ 129 (298)
|+.|++ ..++ ...|+++|+|-||-=|.|.+-+++..++....|.++.=++ +--|+....++++
T Consensus 188 I~~ll~-~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGs------PRVGN~~Fa~~~~ 251 (365)
T PLN02408 188 IARLLQ-SYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGG------PRVGNRSFRRQLE 251 (365)
T ss_pred HHHHHH-hcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCC------CCcccHHHHHHHH
Confidence 334444 2343 3469999999999999999999998876433466666444 3345555555554
No 13
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=86.99 E-value=0.91 Score=40.02 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
..++.+++++.++.--++++|+|.|.|+||..++.-+
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHH
Confidence 4566788888774333678999999999999876544
No 14
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=86.68 E-value=1.4 Score=41.07 Aligned_cols=42 Identities=24% Similarity=0.202 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhC--CC-CcCeeEEeeeChhHHHHHHhHHHHHhh
Q 022338 55 IWLTAMQDLMAKG--MQ-NADQALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 55 i~~avl~~l~~~~--~~-~a~~vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
-+.+++.||.++. ++ ++++|+|+|.||||.=+..-+...++.
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 4566788887632 33 589999999999999999999999986
No 15
>PLN02454 triacylglycerol lipase
Probab=86.12 E-value=8 Score=38.68 Aligned_cols=64 Identities=14% Similarity=0.215 Sum_probs=39.6
Q ss_pred HHHHHHhCCCCcC-eeEEeeeChhHHHHHHhHHHHHhhCC--CCceEEEeecCcccccCCCCCchhhHHHHHHH
Q 022338 60 MQDLMAKGMQNAD-QALLSGCSAGGLASILHCDEFRDLFP--KTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 130 (298)
Q Consensus 60 l~~l~~~~~~~a~-~vilsG~SAGG~g~~~~~d~~~~~lp--~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~ 130 (298)
|++|++ ..++.+ .|+++|+|-||.-|.+.+.+++.... ....|.++.=++ +--|+..+..++..
T Consensus 216 V~~l~~-~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGs------PRVGN~~Fa~~~~~ 282 (414)
T PLN02454 216 IKELLE-RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGS------PQVGNKEFNDRFKE 282 (414)
T ss_pred HHHHHH-hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCC------CcccCHHHHHHHHh
Confidence 444554 244433 69999999999999999988876532 223455555443 33355555555543
No 16
>PLN02802 triacylglycerol lipase
Probab=83.93 E-value=6.2 Score=40.39 Aligned_cols=51 Identities=22% Similarity=0.319 Sum_probs=37.1
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHH
Q 022338 72 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMF 128 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~ 128 (298)
.+|+++|+|-||-=|.|.+.+++...+....|.++.=++ +--|+..+.+++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~ 380 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGG------PRVGNRAFADRL 380 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCC------CCcccHHHHHHH
Confidence 479999999999999999999998877533566666444 334555555555
No 17
>PRK10162 acetyl esterase; Provisional
Probab=83.85 E-value=1.8 Score=41.02 Aligned_cols=45 Identities=16% Similarity=0.110 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHh--CCC-CcCeeEEeeeChhHHHHHHhHHHHHhh
Q 022338 52 GQRIWLTAMQDLMAK--GMQ-NADQALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 52 G~~i~~avl~~l~~~--~~~-~a~~vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
+.....++++|+.+. .++ ++++|+|.|.||||.-++.-+-.+++.
T Consensus 131 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 131 AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 456677788888752 244 578999999999999988877777654
No 18
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.66 E-value=3.8 Score=38.17 Aligned_cols=55 Identities=16% Similarity=0.259 Sum_probs=35.9
Q ss_pred HHHHHHHHHHh-CCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccccc
Q 022338 56 WLTAMQDLMAK-GMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLD 114 (298)
Q Consensus 56 ~~avl~~l~~~-~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld 114 (298)
+.++|+.|.+. |+ ..++|.|.|+|.||.-+.+-+..+.+++ .++.++.=+|.++.
T Consensus 96 la~~l~~L~~~~g~-~~~~i~lIGhSlGa~vAg~~a~~~~~~v---~~iv~LDPa~p~f~ 151 (275)
T cd00707 96 LAKFLDFLVDNTGL-SLENVHLIGHSLGAHVAGFAGKRLNGKL---GRITGLDPAGPLFS 151 (275)
T ss_pred HHHHHHHHHHhcCC-ChHHEEEEEecHHHHHHHHHHHHhcCcc---ceeEEecCCccccc
Confidence 44556666653 33 4678999999999988877766554433 24555554666544
No 19
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=82.36 E-value=4.7 Score=35.96 Aligned_cols=39 Identities=21% Similarity=0.217 Sum_probs=29.6
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 110 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 110 (298)
..+|+++|+|-||.=|.+.+-.++...+. .++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~~-~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGPG-SDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCCC-CceEEEEeCC
Confidence 46799999999999888888888877643 4566666444
No 20
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=82.33 E-value=1.3 Score=39.54 Aligned_cols=42 Identities=19% Similarity=0.289 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhCCCCcCe-eEEeeeChhHHHHHHhHHHHHhhC
Q 022338 55 IWLTAMQDLMAKGMQNADQ-ALLSGCSAGGLASILHCDEFRDLF 97 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~-vilsG~SAGG~g~~~~~d~~~~~l 97 (298)
+.++++.++.+ .++.... ..|+|+|.||++|+..+=.--+.+
T Consensus 98 l~~el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 98 LTEELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp HHTHHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHSTTTE
T ss_pred hhccchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCcccc
Confidence 33444444444 4553333 899999999999986554433444
No 21
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=81.79 E-value=5 Score=39.69 Aligned_cols=36 Identities=8% Similarity=0.050 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASIL 88 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~ 88 (298)
.....+++++|.....-+.++|.|.|.|.||+-++.
T Consensus 246 ~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~ 281 (414)
T PRK05077 246 SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVR 281 (414)
T ss_pred HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHH
Confidence 344578899887643336789999999999987654
No 22
>PRK13604 luxD acyl transferase; Provisional
Probab=81.07 E-value=3.3 Score=39.74 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=37.2
Q ss_pred eHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEE-EeecCccc
Q 022338 51 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVK-CLSDAGMF 112 (298)
Q Consensus 51 rG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~-~l~DsG~f 112 (298)
.|..-+.+++++|.++ ..++|.|.|+|.||.-+++-+. .- . +. ++.|||+.
T Consensus 90 ~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~----~~--~--v~~lI~~sp~~ 141 (307)
T PRK13604 90 IGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN----EI--D--LSFLITAVGVV 141 (307)
T ss_pred ccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc----CC--C--CCEEEEcCCcc
Confidence 3788999999999875 3467999999999987644332 11 1 33 77899865
No 23
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.34 E-value=3.1 Score=34.70 Aligned_cols=28 Identities=21% Similarity=0.134 Sum_probs=22.2
Q ss_pred CcCeeEEeeeChhHHHHHHhHHHHHhhC
Q 022338 70 NADQALLSGCSAGGLASILHCDEFRDLF 97 (298)
Q Consensus 70 ~a~~vilsG~SAGG~g~~~~~d~~~~~l 97 (298)
...+|+++|+|.||-=|.+-+-+++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 4678999999999977777777776654
No 24
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=79.23 E-value=0.92 Score=46.05 Aligned_cols=26 Identities=31% Similarity=0.539 Sum_probs=21.9
Q ss_pred CCCCcCeeEEeeeChhHHHHHHhHHHH
Q 022338 67 GMQNADQALLSGCSAGGLASILHCDEF 93 (298)
Q Consensus 67 ~~~~a~~vilsG~SAGG~g~~~~~d~~ 93 (298)
|| +++++||||-|+|.+||+++...+
T Consensus 353 gF-~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 353 GF-DHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred CC-CHHHeeeccccccchhhhhhcccC
Confidence 66 567899999999999999987544
No 25
>PLN03037 lipase class 3 family protein; Provisional
Probab=79.23 E-value=10 Score=38.96 Aligned_cols=55 Identities=16% Similarity=0.258 Sum_probs=38.8
Q ss_pred CcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHHHH
Q 022338 70 NADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 130 (298)
Q Consensus 70 ~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~ 130 (298)
....|+|+|+|-||--|.|++-+++..+|....|.++.=++ +--|+..+.++++.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGs------PRVGN~aFA~~~~~ 370 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGA------PRVGNLAFKEKLNE 370 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecC------CCccCHHHHHHHHh
Confidence 45679999999999999999999998887532455555333 33455555555543
No 26
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=79.13 E-value=2.7 Score=41.78 Aligned_cols=44 Identities=30% Similarity=0.577 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHH---h--C-CCCcCeeEEeeeChhHHHHHHhHHHHHhhC
Q 022338 54 RIWLTAMQDLMA---K--G-MQNADQALLSGCSAGGLASILHCDEFRDLF 97 (298)
Q Consensus 54 ~i~~avl~~l~~---~--~-~~~a~~vilsG~SAGG~g~~~~~d~~~~~l 97 (298)
.-++.+.++|++ + . ..++++.+|+|.|.||++|+.-.=.--++|
T Consensus 264 ~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~F 313 (411)
T PRK10439 264 DFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERF 313 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccc
Confidence 445666677765 1 2 347889999999999999886544333333
No 27
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=78.69 E-value=4.9 Score=39.68 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHh
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD 95 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~ 95 (298)
=+-++.++|.+. ...+.|+|.|.||||--++--..+++.
T Consensus 180 qlv~~Y~~Lv~~--~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 180 QLVATYDYLVES--EGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred HHHHHHHHHHhc--cCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 344556777731 235889999999999998888888877
No 28
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=78.41 E-value=2.5 Score=38.50 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
|++.|+++|+. .+...++|+|||++-+.+++-
T Consensus 17 Vl~~L~e~gi~-~~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 17 VLSLLIEAGVI-NETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHcCCC-CCCCEEEEEcHHHHHHHHHHc
Confidence 67778887765 234579999999998776653
No 29
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=77.83 E-value=2.8 Score=38.65 Aligned_cols=23 Identities=17% Similarity=0.384 Sum_probs=19.4
Q ss_pred CcCeeEEeeeChhHHHHHHhHHH
Q 022338 70 NADQALLSGCSAGGLASILHCDE 92 (298)
Q Consensus 70 ~a~~vilsG~SAGG~g~~~~~d~ 92 (298)
+.+++.|+|.|+||.+|+..+-.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 56789999999999998877654
No 30
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=77.41 E-value=2.9 Score=35.87 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
-|++.|.++|+. --+++|+|||++-+.+++-
T Consensus 15 Gvl~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 15 GVAKALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 367777777776 5689999999988766553
No 31
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=76.64 E-value=4.7 Score=35.62 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
-+.++|+.+.+++ -.+++|+|.|.|-||.-|+.-+
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~ 123 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLA 123 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHH
Confidence 3455566555545 5778999999999998877654
No 32
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=75.84 E-value=4.3 Score=31.26 Aligned_cols=48 Identities=21% Similarity=0.292 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHh-CCCCcCeeEEeeeChh-HHHHHHhHHHHHhhCCCCceEEE
Q 022338 53 QRIWLTAMQDLMAK-GMQNADQALLSGCSAG-GLASILHCDEFRDLFPKTTKVKC 105 (298)
Q Consensus 53 ~~i~~avl~~l~~~-~~~~a~~vilsG~SAG-G~g~~~~~d~~~~~lp~~~~v~~ 105 (298)
.++++.-+++...+ .+..+++||+.|+|.| ||++ ++...+..++....
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAs-----RIa~aFg~gA~TiG 69 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLAS-----RIAAAFGAGADTIG 69 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHH-----HHHHHHCC--EEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHH-----HHHHHhcCCCCEEE
Confidence 46788888888874 5677899999999998 4443 44555554444433
No 33
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=75.80 E-value=6 Score=35.06 Aligned_cols=37 Identities=16% Similarity=0.464 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCC
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP 98 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp 98 (298)
..+.++.+++. .. ++.++|.|+|.||+-|.. ++++++
T Consensus 45 a~~~l~~~i~~-~~-~~~~~liGSSlGG~~A~~----La~~~~ 81 (187)
T PF05728_consen 45 AIAQLEQLIEE-LK-PENVVLIGSSLGGFYATY----LAERYG 81 (187)
T ss_pred HHHHHHHHHHh-CC-CCCeEEEEEChHHHHHHH----HHHHhC
Confidence 33445555552 22 333999999999976654 555654
No 34
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=75.61 E-value=7.4 Score=37.81 Aligned_cols=69 Identities=19% Similarity=0.156 Sum_probs=41.8
Q ss_pred eEEeHHHHHHHHHHH-HHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCC
Q 022338 48 LYFRGQRIWLTAMQD-LMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVD 117 (298)
Q Consensus 48 l~frG~~i~~avl~~-l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~ 117 (298)
-|.-|-.-++-+++. ++.+ -.+.++|+|+|.||||--|..=+.++++-=+...++++..=--.|+...+
T Consensus 142 ~y~D~~~Al~w~~~~~~~~~-~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 142 AYDDGWAALKWVLKNSWLKL-GADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred cchHHHHHHHHHHHhHHHHh-CCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCC
Confidence 445565566666663 3332 35778899999999998888888888764211234444433334444443
No 35
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=75.41 E-value=2.8 Score=43.98 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=30.8
Q ss_pred eHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHH
Q 022338 51 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLA 85 (298)
Q Consensus 51 rG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g 85 (298)
+...-+-|+-+.|...|+...++++..|.||||+=
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmL 540 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGML 540 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHH
Confidence 34567889999999999999999999999999963
No 36
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=75.29 E-value=4.1 Score=37.17 Aligned_cols=41 Identities=15% Similarity=0.262 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCC
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK 99 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~ 99 (298)
.+.++++++..+---++++|.++|.|+||.-+. .+.-.+|+
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 577888888874334899999999999996554 45556665
No 37
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=73.65 E-value=3.6 Score=37.85 Aligned_cols=32 Identities=25% Similarity=0.383 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCcCee-EEeeeChhHHHHHHhH
Q 022338 59 AMQDLMAKGMQNADQA-LLSGCSAGGLASILHC 90 (298)
Q Consensus 59 vl~~l~~~~~~~a~~v-ilsG~SAGG~g~~~~~ 90 (298)
|++.|.++|..--+++ .++|+|||++-+.+.+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 6777777776533344 7899999999877764
No 38
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=72.99 E-value=7.9 Score=36.43 Aligned_cols=63 Identities=17% Similarity=0.268 Sum_probs=40.1
Q ss_pred eHHHHHHHHHHHHHH-------hCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCce--EEEeecCccccc
Q 022338 51 RGQRIWLTAMQDLMA-------KGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTK--VKCLSDAGMFLD 114 (298)
Q Consensus 51 rG~~i~~avl~~l~~-------~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~--v~~l~DsG~fld 114 (298)
.|..--.++||-+.. .|++...+|.|.|.|-||.+++.-+. ++..+-++.+ +++.+=.|.-.|
T Consensus 43 ~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~-l~~~YApeL~~~l~Gaa~gg~~~d 114 (290)
T PF03583_consen 43 NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE-LAPSYAPELNRDLVGAAAGGPPAD 114 (290)
T ss_pred CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH-HhHHhCcccccceeEEeccCCccC
Confidence 444445555554443 25666789999999999999976554 4444433466 777665565444
No 39
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=71.21 E-value=4.8 Score=36.95 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCCcCe-eEEeeeChhHHHHHHhH
Q 022338 59 AMQDLMAKGMQNADQ-ALLSGCSAGGLASILHC 90 (298)
Q Consensus 59 vl~~l~~~~~~~a~~-vilsG~SAGG~g~~~~~ 90 (298)
|++.|+++|+.-..+ -.++|+|||++-+.+.+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 677777777643332 48999999999876544
No 40
>PLN02442 S-formylglutathione hydrolase
Probab=70.38 E-value=6 Score=36.78 Aligned_cols=22 Identities=23% Similarity=0.299 Sum_probs=18.7
Q ss_pred CcCeeEEeeeChhHHHHHHhHH
Q 022338 70 NADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 70 ~a~~vilsG~SAGG~g~~~~~d 91 (298)
+.++++|+|.|+||++|+..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 5688999999999999886554
No 41
>PLN02310 triacylglycerol lipase
Probab=70.28 E-value=26 Score=35.03 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=36.2
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHHH
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFA 129 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~ 129 (298)
..+|+++|+|-||-=|.|.+..++..++. ..|.++.=++. --|+..+.+.+.
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~~-~~v~vyTFGsP------RVGN~~Fa~~~~ 259 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIPD-LFVSVISFGAP------RVGNIAFKEKLN 259 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCcC-cceeEEEecCC------CcccHHHHHHHH
Confidence 45799999999999999999888877764 45666654443 335555544443
No 42
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=69.89 E-value=8.4 Score=35.40 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
.-+.++++.|.. ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~-~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE-AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh-hCCCCCcEEEEEECHHHHHHHHHh
Confidence 456777887765 344457799999999999887764
No 43
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=69.80 E-value=5.6 Score=36.74 Aligned_cols=31 Identities=26% Similarity=0.107 Sum_probs=20.6
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
|++.|.++|...... .++|+|||++-+...+
T Consensus 18 Vl~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 18 VAVCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 566677766322122 3999999999877653
No 44
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=69.45 E-value=21 Score=31.09 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecC
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 109 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 109 (298)
.....++.+.+. .++ ...+|.|.|.||+=|+-=+-.+.+. ...+...++.|+
T Consensus 51 la~~y~~~I~~~-~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 51 LASRYAEAIRAR-QPE-GPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHH-TSS-SSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHhhhh-CCC-CCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 344444555442 222 2899999999999888888887777 323555666775
No 45
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=69.39 E-value=15 Score=34.22 Aligned_cols=45 Identities=18% Similarity=0.128 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCce
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTK 102 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~ 102 (298)
+-+.++++.|....-.....++|.|+|.||.-++..+ ...|..++
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a----~~~p~~v~ 160 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIH----LANPEGFD 160 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHH----hcCcccce
Confidence 3456667776542111234699999999998776433 34554343
No 46
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.23 E-value=12 Score=34.75 Aligned_cols=66 Identities=23% Similarity=0.316 Sum_probs=39.3
Q ss_pred CCCcCeeEEeeeChhHHHHHHhHHHHHhhCCC--C----ceEEEee-cCcccccCCCCCchhhHHHHHHHHHH
Q 022338 68 MQNADQALLSGCSAGGLASILHCDEFRDLFPK--T----TKVKCLS-DAGMFLDAVDVSGGHTLRNMFAGVVS 133 (298)
Q Consensus 68 ~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~--~----~~v~~l~-DsG~fld~~~~~g~~~~~~~~~~~~~ 133 (298)
...++.|+++|||-||+|--+--..-++-+.- . .+..-|. |+|.+.---|++-.+.++.+-..+.+
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 45788999999999999965544443332110 0 0112233 88988655556555666655555543
No 47
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=68.15 E-value=7.8 Score=35.13 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHh---CCCCcCeeEEeeeChhHHHHHHh
Q 022338 55 IWLTAMQDLMAK---GMQNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 55 i~~avl~~l~~~---~~~~a~~vilsG~SAGG~g~~~~ 89 (298)
-+...++.+++. .....+.|+|.|+|.||+-+..-
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~ 102 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSA 102 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHH
Confidence 344455666552 35789999999999999865443
No 48
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=68.11 E-value=6 Score=40.29 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=30.7
Q ss_pred eHHHHHHHHHHHHHHh--CCC-CcCeeEEeeeChhHHHHH
Q 022338 51 RGQRIWLTAMQDLMAK--GMQ-NADQALLSGCSAGGLASI 87 (298)
Q Consensus 51 rG~~i~~avl~~l~~~--~~~-~a~~vilsG~SAGG~g~~ 87 (298)
-|..-..++|+|..++ .|+ +++.|-|.|.||||..++
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~ 195 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASIL 195 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHH
Confidence 5888888999998873 454 899999999999997744
No 49
>PLN02324 triacylglycerol lipase
Probab=67.99 E-value=33 Score=34.40 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=26.2
Q ss_pred HHHHHHhCCCCc-CeeEEeeeChhHHHHHHhHHHHHhh
Q 022338 60 MQDLMAKGMQNA-DQALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 60 l~~l~~~~~~~a-~~vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
|.+|++ ..++. .+|++||+|-||--|.|.+-++...
T Consensus 203 V~~L~~-~Yp~e~~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 203 LKRLLE-LYKNEEISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred HHHHHH-HCCCCCceEEEecCcHHHHHHHHHHHHHHHh
Confidence 344554 34543 4799999999999888888777653
No 50
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=67.76 E-value=6.1 Score=36.40 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=22.1
Q ss_pred HHHHHHhCCCCcCeeEEeeeChhHHHHHHh
Q 022338 60 MQDLMAKGMQNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 60 l~~l~~~~~~~a~~vilsG~SAGG~g~~~~ 89 (298)
+++++. -+++++.++++|+|||+--++.-
T Consensus 125 v~filk-~~~n~k~l~~gGHSaGAHLa~qa 153 (270)
T KOG4627|consen 125 VNFILK-YTENTKVLTFGGHSAGAHLAAQA 153 (270)
T ss_pred HHHHHH-hcccceeEEEcccchHHHHHHHH
Confidence 555555 58899999999999998654433
No 51
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=66.74 E-value=12 Score=33.49 Aligned_cols=56 Identities=20% Similarity=0.285 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccccc
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLD 114 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld 114 (298)
-++.++++|.++..-++++|-|.|.|-||--|++- +..+|.=..|..++.|++..-
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALll----As~~~~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLL----ASRFPQISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHH----HHHSSSEEEEEEES--SB--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHH----HhcCCCccEEEEeCCceeEec
Confidence 36788999987544567899999999999877764 466664234666777776553
No 52
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=65.79 E-value=29 Score=33.50 Aligned_cols=67 Identities=13% Similarity=0.087 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCC-CCceEEEeecCcccccCCCCCchhhHHHHHHH
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP-KTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 130 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp-~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~ 130 (298)
+++.++.|+. .++ --+|++||+|.||-=|.+-+.++...-. ...+|+++.=++ +-.|+......+..
T Consensus 157 ~~~~~~~L~~-~~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~------PRvGn~~fa~~~d~ 224 (336)
T KOG4569|consen 157 LDAELRRLIE-LYP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ------PRVGNLAFAEWHDE 224 (336)
T ss_pred HHHHHHHHHH-hcC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC------CCcccHHHHHHHHh
Confidence 4455666665 344 5679999999999777777777766543 234666666444 44555555554444
No 53
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=64.81 E-value=24 Score=29.10 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=24.8
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccc
Q 022338 72 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 112 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 112 (298)
++++|.|+|.||.-++..+ ...|..++-.++.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLA----ARYPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHH----HHSGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccc----cccccccccceeeccccc
Confidence 6899999999998776655 335544444445555554
No 54
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=63.13 E-value=8.9 Score=36.00 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhCCC---------CcCeeEEeeeChhHHHHHHhHHHH
Q 022338 54 RIWLTAMQDLMAKGMQ---------NADQALLSGCSAGGLASILHCDEF 93 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~---------~a~~vilsG~SAGG~g~~~~~d~~ 93 (298)
+.+.++++||.+ ++. +.++|-|+|+|+||-.++.-+-..
T Consensus 65 ~~~~~vi~Wl~~-~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~ 112 (259)
T PF12740_consen 65 ASAAEVIDWLAK-GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGN 112 (259)
T ss_pred HHHHHHHHHHHh-cchhhccccccccccceEEeeeCCCCHHHHHHHhhh
Confidence 457788999876 332 567899999999998887655444
No 55
>PLN00021 chlorophyllase
Probab=61.79 E-value=13 Score=35.45 Aligned_cols=39 Identities=15% Similarity=0.057 Sum_probs=27.0
Q ss_pred HHHHHHHHHHh---C-----CCCcCeeEEeeeChhHHHHHHhHHHHH
Q 022338 56 WLTAMQDLMAK---G-----MQNADQALLSGCSAGGLASILHCDEFR 94 (298)
Q Consensus 56 ~~avl~~l~~~---~-----~~~a~~vilsG~SAGG~g~~~~~d~~~ 94 (298)
..++++||.+. - -.+.+++.|.|+|+||..++.-+-...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 45667776641 1 124588999999999998887664443
No 56
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=61.40 E-value=11 Score=32.63 Aligned_cols=31 Identities=26% Similarity=0.457 Sum_probs=22.2
Q ss_pred HHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 57 LTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 57 ~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
-.|++.|.++|+.- =+++|.||||+=+.+.+
T Consensus 15 ~Gvl~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 15 IGALKALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 35677777766543 68999999998765544
No 57
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=61.32 E-value=23 Score=32.51 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=18.6
Q ss_pred CCCcCeeEEeeeChhHHHHHHhHH
Q 022338 68 MQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 68 ~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
+...++++|.|+|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 434589999999999997666653
No 58
>PRK11460 putative hydrolase; Provisional
Probab=61.21 E-value=13 Score=33.37 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=21.6
Q ss_pred HHHHHHHHh-CCCCcCeeEEeeeChhHHHHHH
Q 022338 58 TAMQDLMAK-GMQNADQALLSGCSAGGLASIL 88 (298)
Q Consensus 58 avl~~l~~~-~~~~a~~vilsG~SAGG~g~~~ 88 (298)
++++++..+ +. +.++|+|.|.|.||.-++.
T Consensus 89 ~~i~~~~~~~~~-~~~~i~l~GfS~Gg~~al~ 119 (232)
T PRK11460 89 ETVRYWQQQSGV-GASATALIGFSQGAIMALE 119 (232)
T ss_pred HHHHHHHHhcCC-ChhhEEEEEECHHHHHHHH
Confidence 445555543 33 4689999999999988875
No 59
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=61.00 E-value=22 Score=33.07 Aligned_cols=61 Identities=23% Similarity=0.247 Sum_probs=36.5
Q ss_pred EeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHH--HhhCCCCceEEEeecCccccc
Q 022338 50 FRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEF--RDLFPKTTKVKCLSDAGMFLD 114 (298)
Q Consensus 50 frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~--~~~lp~~~~v~~l~DsG~fld 114 (298)
.+-..=+++||..|..+ -.-+++-+.|+|.||++++.+.-.- ...+|+- -+++.=+|.|-.
T Consensus 83 ~~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l--~K~V~Ia~pfng 145 (255)
T PF06028_consen 83 KKQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKL--NKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EE--EEEEEES--TTT
T ss_pred HHHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCccc--ceEEEeccccCc
Confidence 34456678889998873 2467899999999999987554432 2236642 344444566543
No 60
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=60.71 E-value=13 Score=37.52 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHh--CC-CCcCeeEEeeeChhHHHHHHh
Q 022338 55 IWLTAMQDLMAK--GM-QNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 55 i~~avl~~l~~~--~~-~~a~~vilsG~SAGG~g~~~~ 89 (298)
-..+.|+|+... .| +++++|.|.|.||||..+-++
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHH
Confidence 445667777763 34 489999999999999887544
No 61
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=60.41 E-value=19 Score=30.32 Aligned_cols=23 Identities=22% Similarity=0.327 Sum_probs=18.1
Q ss_pred CcCeeEEeeeChhHHHHHHhHHH
Q 022338 70 NADQALLSGCSAGGLASILHCDE 92 (298)
Q Consensus 70 ~a~~vilsG~SAGG~g~~~~~d~ 92 (298)
..++++|.|.|+||.-++..+..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh
Confidence 35679999999999877766554
No 62
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=59.42 E-value=11 Score=35.59 Aligned_cols=45 Identities=24% Similarity=0.251 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHh--hCCC
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD--LFPK 99 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~--~lp~ 99 (298)
..=++.+|.+|.++ -+-+++=+.|+|+||+|...+.-.... .+|.
T Consensus 119 s~wlk~~msyL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 119 SKWLKKAMSYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred HHHHHHHHHHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc
Confidence 34578889999873 234456688999999998877766653 4775
No 63
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=59.34 E-value=25 Score=30.99 Aligned_cols=35 Identities=20% Similarity=0.060 Sum_probs=22.6
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecC
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 109 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 109 (298)
.++++|.|.|.||.-++..+ ...|..++-.++.++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a----~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLA----LDGPVTPRMVVGINA 128 (278)
T ss_pred CCCceEEEECccHHHHHHHH----HhCCcccceEEEEcC
Confidence 36789999999998777554 345543443344444
No 64
>PRK10673 acyl-CoA esterase; Provisional
Probab=59.33 E-value=21 Score=31.27 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=22.8
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 110 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 110 (298)
.++++|.|+|.||.-++..+. ..|..++-.++.|++
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~----~~~~~v~~lvli~~~ 115 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTA----LAPDRIDKLVAIDIA 115 (255)
T ss_pred CCceEEEEECHHHHHHHHHHH----hCHhhcceEEEEecC
Confidence 356999999999987765553 344434434444443
No 65
>PLN02753 triacylglycerol lipase
Probab=58.65 E-value=52 Score=34.01 Aligned_cols=53 Identities=19% Similarity=0.336 Sum_probs=35.7
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhh-CCC-----CceEEEeecCcccccCCCCCchhhHHHHHH
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDL-FPK-----TTKVKCLSDAGMFLDAVDVSGGHTLRNMFA 129 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~-lp~-----~~~v~~l~DsG~fld~~~~~g~~~~~~~~~ 129 (298)
..+|+++|+|-||-=|.|.+.+++.. ++. ...|.++.=++ +--|+..+.+++.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~ 369 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGG------PRVGNVRFKDRME 369 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCC------CCccCHHHHHHHH
Confidence 46899999999999999999888764 321 23355555443 3445666655554
No 66
>PLN02965 Probable pheophorbidase
Probab=58.62 E-value=25 Score=31.37 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=23.6
Q ss_pred CCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecC
Q 022338 68 MQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 109 (298)
Q Consensus 68 ~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 109 (298)
++..++++|.|+|.||.=+...+ ...|..++-.++.++
T Consensus 68 l~~~~~~~lvGhSmGG~ia~~~a----~~~p~~v~~lvl~~~ 105 (255)
T PLN02965 68 LPPDHKVILVGHSIGGGSVTEAL----CKFTDKISMAIYVAA 105 (255)
T ss_pred cCCCCCEEEEecCcchHHHHHHH----HhCchheeEEEEEcc
Confidence 43336899999999997555433 345654444444454
No 67
>PLN02571 triacylglycerol lipase
Probab=58.60 E-value=19 Score=36.01 Aligned_cols=39 Identities=10% Similarity=0.207 Sum_probs=26.7
Q ss_pred HHHHHHHH--hCCCCcC-eeEEeeeChhHHHHHHhHHHHHhh
Q 022338 58 TAMQDLMA--KGMQNAD-QALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 58 avl~~l~~--~~~~~a~-~vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
.|++++.+ ..+++.+ .|+++|+|-||.=|.+.+-.++..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHh
Confidence 45555433 1344433 699999999998888888888653
No 68
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=58.16 E-value=38 Score=32.46 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=50.0
Q ss_pred CCCCCCc--cccEEEE--eCCCCCcccccCCCCCCeeEEeHHHHHHHHHHHHHHhCCC--CcCeeEEeeeChhHHHHHHh
Q 022338 16 EENPDFF--NWNRVKL--RYCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLASILH 89 (298)
Q Consensus 16 ~~NP~f~--~wn~V~v--pYC~Gd~~~G~~~~~~~~l~frG~~i~~avl~~l~~~~~~--~a~~vilsG~SAGG~g~~~~ 89 (298)
..||+=+ ..|+||| |=-+|-|+.-+......+.---...+.++ |..++.+ ++ +...+.|+|.|.||.=+..-
T Consensus 76 ~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~f-l~~f~~~-~p~~~~~~~yi~GESYgG~yvP~~ 153 (415)
T PF00450_consen 76 EDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEF-LQQFFQK-FPEYRSNPLYIAGESYGGHYVPAL 153 (415)
T ss_dssp EE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHH-HHHHHHH-SGGGTTSEEEEEEETTHHHHHHHH
T ss_pred cccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHH-HHHhhhh-hhhccCCCEEEEccccccccchhh
Confidence 4566222 3688999 45555555543321011111122233333 3333332 44 34479999999999988888
Q ss_pred HHHHHhhCCC----CceEEEee
Q 022338 90 CDEFRDLFPK----TTKVKCLS 107 (298)
Q Consensus 90 ~d~~~~~lp~----~~~v~~l~ 107 (298)
+.+|.+.-.+ ...+++|.
T Consensus 154 a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 154 ASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp HHHHHHHTCC--STTSEEEEEE
T ss_pred HHhhhhccccccccccccccce
Confidence 8888877643 46777765
No 69
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=56.83 E-value=35 Score=31.10 Aligned_cols=55 Identities=9% Similarity=0.059 Sum_probs=39.5
Q ss_pred eHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCC---CCceEEEeecC
Q 022338 51 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP---KTTKVKCLSDA 109 (298)
Q Consensus 51 rG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp---~~~~v~~l~Ds 109 (298)
.|..++.+.|+.. ....+.|++.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~----~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAA----IAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhh----ccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 4667777776653 3367889999999999999988888887422 23556666654
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=56.65 E-value=30 Score=34.88 Aligned_cols=55 Identities=16% Similarity=0.094 Sum_probs=34.9
Q ss_pred HHHHHHHHHHH-hCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCc-eEEEeecCccccc
Q 022338 55 IWLTAMQDLMA-KGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTT-KVKCLSDAGMFLD 114 (298)
Q Consensus 55 i~~avl~~l~~-~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~-~v~~l~DsG~fld 114 (298)
.+.++|++|.+ .++ ..++|.|.|+|.||.-|..-.. ++|..+ ++.+|.=+|.++.
T Consensus 102 ~la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag~----~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 102 DVAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAGS----LTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred HHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHHH----hCCcceeEEEEEcCCCCccc
Confidence 34556777764 244 5688999999999987766443 444322 4555555666544
No 71
>PRK10349 carboxylesterase BioH; Provisional
Probab=56.58 E-value=29 Score=30.75 Aligned_cols=49 Identities=16% Similarity=0.227 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCc
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 110 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 110 (298)
.+....+++...+ .+++.|.|.|.||.-++..+- ..|..++-.++.|+.
T Consensus 60 ~~~~~~~~l~~~~---~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lili~~~ 108 (256)
T PRK10349 60 SLADMAEAVLQQA---PDKAIWLGWSLGGLVASQIAL----THPERVQALVTVASS 108 (256)
T ss_pred CHHHHHHHHHhcC---CCCeEEEEECHHHHHHHHHHH----hChHhhheEEEecCc
Confidence 3455566666533 378999999999997775443 345434444445654
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=56.34 E-value=23 Score=33.09 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
+.+++++|.+.+ .++|+|.|.|.||.=++..+
T Consensus 86 v~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 86 VAAAYRWLIEQG---HPPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHH
Confidence 445566665532 56899999999998776543
No 73
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=56.15 E-value=13 Score=34.40 Aligned_cols=31 Identities=23% Similarity=0.214 Sum_probs=20.3
Q ss_pred HHHHHHHhCCCC-cCeeEEeeeChhHHHHHHh
Q 022338 59 AMQDLMAKGMQN-ADQALLSGCSAGGLASILH 89 (298)
Q Consensus 59 vl~~l~~~~~~~-a~~vilsG~SAGG~g~~~~ 89 (298)
|++.|+++|..- .+--.++|+|||++.+...
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~ 53 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATAL 53 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHH
Confidence 566676655421 1124688999999987753
No 74
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=56.14 E-value=25 Score=34.48 Aligned_cols=53 Identities=15% Similarity=0.232 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhC-CCCcCeeEEeeeChhHHHHHHhHHHHHhh-CC--CCceEEEeecCcc
Q 022338 56 WLTAMQDLMAKG-MQNADQALLSGCSAGGLASILHCDEFRDL-FP--KTTKVKCLSDAGM 111 (298)
Q Consensus 56 ~~avl~~l~~~~-~~~a~~vilsG~SAGG~g~~~~~d~~~~~-lp--~~~~v~~l~DsG~ 111 (298)
.+|++++|.++. =.+|+++++-|.|-||.=+ +..+++. +. .+++..++.|-||
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vq---a~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQ---AEALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHH---HHHHHhcccccCCCeeEEEEecCCc
Confidence 467788888632 3589999999999998532 2344432 21 2577778888875
No 75
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=56.03 E-value=16 Score=31.95 Aligned_cols=37 Identities=19% Similarity=0.136 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHh
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~ 89 (298)
...+.+.+++|.+..-...++|.+.|.|.||.-++.-
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~ 115 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLL 115 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhh
Confidence 3445666888876443478999999999999887753
No 76
>PLN00413 triacylglycerol lipase
Probab=55.95 E-value=19 Score=36.74 Aligned_cols=35 Identities=23% Similarity=0.351 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHh
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD 95 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~ 95 (298)
.+++++. ..+++ +|+++|+|.||-=|.+.+..++.
T Consensus 273 ~Lk~ll~-~~p~~-kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 273 HLKEIFD-QNPTS-KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHH-HCCCC-eEEEEecCHHHHHHHHHHHHHHh
Confidence 3444444 34444 59999999999888888877664
No 77
>PRK04940 hypothetical protein; Provisional
Probab=54.97 E-value=24 Score=31.33 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=19.0
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHhhCC
Q 022338 72 DQALLSGCSAGGLASILHCDEFRDLFP 98 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~~lp 98 (298)
+.++|.|+|-|| +++-++..++.
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 579999999999 57777777774
No 78
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=54.96 E-value=11 Score=39.82 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=30.9
Q ss_pred eHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHH
Q 022338 51 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLA 85 (298)
Q Consensus 51 rG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g 85 (298)
.+..-+.+..++|.++|+-.++++-+.|.||||+=
T Consensus 528 N~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 528 NSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred ccHHHHHHHHHHHHHcCCCCccceeEecccCccch
Confidence 34567888999999999999999999999999974
No 79
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=54.95 E-value=36 Score=33.34 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=24.6
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCce-EEEeecCccccc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTK-VKCLSDAGMFLD 114 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~-v~~l~DsG~fld 114 (298)
.++++|.|+|.||+-++..+-. .|..++ +.++.-+|+...
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~----~p~~v~~lvl~~p~~~~~~ 215 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK----HPEHVQHLILVGPAGFSSE 215 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh----CchhhcEEEEECCccccCC
Confidence 3579999999999887765533 343232 444444555443
No 80
>PLN02719 triacylglycerol lipase
Probab=54.65 E-value=25 Score=36.21 Aligned_cols=53 Identities=15% Similarity=0.304 Sum_probs=35.0
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhh-CCC-----CceEEEeecCcccccCCCCCchhhHHHHHH
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDL-FPK-----TTKVKCLSDAGMFLDAVDVSGGHTLRNMFA 129 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~-lp~-----~~~v~~l~DsG~fld~~~~~g~~~~~~~~~ 129 (298)
..+|+++|+|.||-=|.|.+.+++.. ++. ...|.++.=++ +--|+..+...+.
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGs------PRVGN~~Fa~~~~ 355 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGG------PRVGNIRFKERIE 355 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecC------CCccCHHHHHHHH
Confidence 45899999999999999999988875 331 12355555333 3345555555554
No 81
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=54.36 E-value=28 Score=29.34 Aligned_cols=51 Identities=20% Similarity=0.251 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccc
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 112 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 112 (298)
.++.+.+++... +. +++.|.|.|.||.-++..+. ..|..++-.++.+++..
T Consensus 51 ~~~~~~~~~~~~-~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 51 SLADAAEAIAAQ-AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSPC 101 (245)
T ss_pred CHHHHHHHHHHh-CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCcc
Confidence 456666666652 22 68999999999987765443 33433333344455443
No 82
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=54.29 E-value=22 Score=32.05 Aligned_cols=36 Identities=22% Similarity=0.210 Sum_probs=22.7
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 110 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 110 (298)
.++++|.|.|.||.=++.-+- ..|..++-.++.++.
T Consensus 90 ~~~~~LvG~S~GG~va~~~a~----~~p~~v~~lvl~~~~ 125 (276)
T TIGR02240 90 YGQVNAIGVSWGGALAQQFAH----DYPERCKKLILAATA 125 (276)
T ss_pred cCceEEEEECHHHHHHHHHHH----HCHHHhhheEEeccC
Confidence 457999999999987664443 344334444444544
No 83
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=54.29 E-value=15 Score=36.67 Aligned_cols=31 Identities=23% Similarity=0.542 Sum_probs=22.5
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
-|++.|.++|+.- + +++|+|||++-+.+.+-
T Consensus 90 GVLkaL~E~gl~p-~--vIsGTSaGAivAal~as 120 (421)
T cd07230 90 GVLKALFEANLLP-R--IISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHHcCCCC-C--EEEEECHHHHHHHHHHc
Confidence 3577777777653 2 79999999988766553
No 84
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=52.91 E-value=28 Score=34.48 Aligned_cols=80 Identities=20% Similarity=0.277 Sum_probs=49.8
Q ss_pred CCeeEEeHHHHHHHHHHHHHHh-CCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhh
Q 022338 45 GAQLYFRGQRIWLTAMQDLMAK-GMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHT 123 (298)
Q Consensus 45 ~~~l~frG~~i~~avl~~l~~~-~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~ 123 (298)
+...-+.-..-++||++..+.. |+ ..+.|||-|.|-||+-+. +.+..+|. ++- ++-|+-| =|.-+. .-..
T Consensus 284 G~P~p~n~~nA~DaVvQfAI~~Lgf-~~edIilygWSIGGF~~~----waAs~YPd-Vka-vvLDAtF-DDllpL-Al~r 354 (517)
T KOG1553|consen 284 GLPYPVNTLNAADAVVQFAIQVLGF-RQEDIILYGWSIGGFPVA----WAASNYPD-VKA-VVLDATF-DDLLPL-ALFR 354 (517)
T ss_pred CCCCcccchHHHHHHHHHHHHHcCC-CccceEEEEeecCCchHH----HHhhcCCC-ceE-EEeecch-hhhhhH-Hhhh
Confidence 4455566677888888887762 44 467899999999997654 56678885 332 2336643 222211 1233
Q ss_pred HHHHHHHHHH
Q 022338 124 LRNMFAGVVS 133 (298)
Q Consensus 124 ~~~~~~~~~~ 133 (298)
|..+|.++|+
T Consensus 355 MP~~~~giV~ 364 (517)
T KOG1553|consen 355 MPTFFSGIVE 364 (517)
T ss_pred chHHHHHHHH
Confidence 5567777654
No 85
>PRK00870 haloalkane dehalogenase; Provisional
Probab=52.84 E-value=61 Score=29.65 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=24.0
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGM 111 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 111 (298)
.++|+|.|+|.||.=++.-+ ...|..++-.++.+++.
T Consensus 114 ~~~v~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 114 LTDVTLVCQDWGGLIGLRLA----AEHPDRFARLVVANTGL 150 (302)
T ss_pred CCCEEEEEEChHHHHHHHHH----HhChhheeEEEEeCCCC
Confidence 35799999999997665444 34454444445566664
No 86
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=52.70 E-value=20 Score=30.54 Aligned_cols=32 Identities=25% Similarity=0.457 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
---+++.|.++|+. . -+++|.|||++-+.+.+
T Consensus 15 ~~Gvl~~L~~~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 15 HIGVLKALEEAGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHHcCCC-e--eEEEEECHHHHHHHHHH
Confidence 34567778776653 3 37999999999876655
No 87
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=52.49 E-value=23 Score=30.34 Aligned_cols=21 Identities=19% Similarity=0.287 Sum_probs=16.8
Q ss_pred cCeeEEeeeChhHHHHHHhHH
Q 022338 71 ADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d 91 (298)
.++++|.|.|.||.-++..+.
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CCcEEEEEechhHHHHHHHHH
Confidence 467999999999987766544
No 88
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=51.97 E-value=21 Score=30.59 Aligned_cols=29 Identities=24% Similarity=0.486 Sum_probs=20.1
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHh
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~ 89 (298)
-+++.|.+.|+. -=+++|.|||++-+.+.
T Consensus 17 Gvl~~L~e~g~~---~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 17 GVLRALEEEGIE---IDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHHHHCCCC---eeEEEEeCHHHHHHHHH
Confidence 356677766653 35899999999855443
No 89
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=51.76 E-value=19 Score=32.55 Aligned_cols=30 Identities=30% Similarity=0.476 Sum_probs=21.7
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
-|++.|.+.|++ . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLEMGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHHcCCC-c--eEEEEeCHHHHHHHHHH
Confidence 356777776664 2 36999999999876655
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=51.71 E-value=20 Score=36.57 Aligned_cols=37 Identities=8% Similarity=-0.025 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
..-+.++|++|..+...+ .+|.+.|.|.||.-+++-+
T Consensus 79 ~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred chHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHh
Confidence 456688999998754544 6899999999997666543
No 91
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=51.54 E-value=16 Score=30.78 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=9.7
Q ss_pred eEEeeeChhHH
Q 022338 74 ALLSGCSAGGL 84 (298)
Q Consensus 74 vilsG~SAGG~ 84 (298)
+++.|.|||+.
T Consensus 70 ~vi~G~SAGA~ 80 (154)
T PF03575_consen 70 GVIIGTSAGAM 80 (154)
T ss_dssp SEEEEETHHHH
T ss_pred CEEEEEChHHh
Confidence 78999999993
No 92
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=50.68 E-value=30 Score=34.84 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
.+++.++.+.+. ...++|+|.|+|+||+=+....
T Consensus 147 ~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 147 GLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHH
Confidence 344444444432 2357899999999998877544
No 93
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=50.53 E-value=24 Score=32.13 Aligned_cols=41 Identities=15% Similarity=0.090 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEF 93 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~ 93 (298)
..-+.+++++|.+.....+++|.++|.|.||.=|++.....
T Consensus 93 ~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 93 LADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 34567888988875556899999999999998777665443
No 94
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=49.93 E-value=26 Score=32.95 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCCCchhhHHHHHHHHH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAGVV 132 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~~~ 132 (298)
+.-++||.++|.+. .++.++|+|-|.|.|..-+ =+++.+.|- +-|.+. |. |+ + .+|-++..
T Consensus 112 y~Di~avye~Lr~~-~g~~~~Iil~G~SiGt~~t----v~Lasr~~~-~alVL~--SP-f~-----S---~~rv~~~~-- 172 (258)
T KOG1552|consen 112 YADIKAVYEWLRNR-YGSPERIILYGQSIGTVPT----VDLASRYPL-AAVVLH--SP-FT-----S---GMRVAFPD-- 172 (258)
T ss_pred hhhHHHHHHHHHhh-cCCCceEEEEEecCCchhh----hhHhhcCCc-ceEEEe--cc-ch-----h---hhhhhccC--
Confidence 46789999999983 3389999999999999663 344556652 223222 22 22 1 22222221
Q ss_pred HhhhccccCCcccccCCCCCCCccc-hhHhhccCcchhhhhhhhhHH
Q 022338 133 SLQEVQKNLPITCTSQLDPTSCFFP-QNLVANIKTPMFLLNAAYDAW 178 (298)
Q Consensus 133 ~l~~~~~~lp~~C~~~~~~~~C~f~-~~~~~~i~tP~Fil~s~YD~w 178 (298)
+... .|.-.|+ ..-++.|+.|+.|+++.=|..
T Consensus 173 -------------~~~~-~~~d~f~~i~kI~~i~~PVLiiHgtdDev 205 (258)
T KOG1552|consen 173 -------------TKTT-YCFDAFPNIEKISKITCPVLIIHGTDDEV 205 (258)
T ss_pred -------------cceE-EeeccccccCcceeccCCEEEEecccCce
Confidence 1111 1111222 566888999999999998874
No 95
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=49.85 E-value=12 Score=30.70 Aligned_cols=17 Identities=41% Similarity=0.606 Sum_probs=13.5
Q ss_pred eEEeeeChhHHHHHHhH
Q 022338 74 ALLSGCSAGGLASILHC 90 (298)
Q Consensus 74 vilsG~SAGG~g~~~~~ 90 (298)
-+++|+||||+-+.+.+
T Consensus 29 d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 29 DVISGTSAGALNAALLA 45 (204)
T ss_dssp SEEEEECCHHHHHHHHH
T ss_pred cEEEEcChhhhhHHHHH
Confidence 47999999999885544
No 96
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=49.46 E-value=51 Score=29.91 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=22.3
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecC
Q 022338 72 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 109 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 109 (298)
++++|.|.|.||.-++..+ ...|+.++-.++.++
T Consensus 102 ~~~~lvGhS~Gg~va~~~a----~~~p~~v~~lili~~ 135 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAA----VDAPELVRGVMLINI 135 (294)
T ss_pred CCeEEEEeCHHHHHHHHHH----HhChhheeEEEEECC
Confidence 7899999999997775554 334543444444454
No 97
>KOG3101 consensus Esterase D [General function prediction only]
Probab=48.73 E-value=6.7 Score=36.28 Aligned_cols=36 Identities=17% Similarity=0.273 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHH----hCCC-CcCeeEEeeeChhHHHHHH
Q 022338 53 QRIWLTAMQDLMA----KGMQ-NADQALLSGCSAGGLASIL 88 (298)
Q Consensus 53 ~~i~~avl~~l~~----~~~~-~a~~vilsG~SAGG~g~~~ 88 (298)
+|...-|.++|.+ ..++ ++.++-++|+|+||.||+.
T Consensus 117 yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~ 157 (283)
T KOG3101|consen 117 YRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALT 157 (283)
T ss_pred hhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEE
Confidence 4555556666554 2233 4566889999999999864
No 98
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=48.63 E-value=20 Score=33.84 Aligned_cols=30 Identities=23% Similarity=0.416 Sum_probs=21.9
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
|++.|.+.| -+--+++|+|||++-+.+.+.
T Consensus 29 Vl~aL~e~g---i~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAG---IPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcC---CCccEEEecCHHHHHHHHHHc
Confidence 577777756 345689999999987666554
No 99
>PLN02847 triacylglycerol lipase
Probab=48.60 E-value=46 Score=35.05 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=18.7
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHh
Q 022338 72 DQALLSGCSAGGLASILHCDEFRD 95 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~ 95 (298)
-+|+|+|+|-||-=|.+-+-.+++
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhc
Confidence 479999999998666666777775
No 100
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=48.37 E-value=26 Score=29.60 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
---|++.|.++++.+ .--.++|.|||++-+...+
T Consensus 13 ~~gvl~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 13 HAGVLSALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 344677777766642 3457899999999888777
No 101
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=47.94 E-value=70 Score=27.83 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=29.5
Q ss_pred EeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHH
Q 022338 50 FRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDE 92 (298)
Q Consensus 50 frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~ 92 (298)
..|...+...|++...+ -++ .+++|+|.|-|+.-+.-....
T Consensus 61 ~~G~~~~~~~i~~~~~~-CP~-~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAAR-CPN-TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHHH-STT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-CCC-CCEEEEecccccHHHHHHHHh
Confidence 35777888888887764 343 589999999999766554433
No 102
>PLN02162 triacylglycerol lipase
Probab=47.26 E-value=34 Score=34.87 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhh
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
..+++++.+ .+ -.+++++|+|-||-=|.+.+..++..
T Consensus 266 ~~L~~lL~k-~p-~~kliVTGHSLGGALAtLaAa~L~~~ 302 (475)
T PLN02162 266 QMLRDKLAR-NK-NLKYILTGHSLGGALAALFPAILAIH 302 (475)
T ss_pred HHHHHHHHh-CC-CceEEEEecChHHHHHHHHHHHHHHc
Confidence 334444442 33 35799999999998888887777643
No 103
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=47.24 E-value=40 Score=28.40 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDE 92 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~ 92 (298)
..-+.+.++.++++ ++..+ +.+.|.|.||.=++..+..
T Consensus 27 ~~~~~~~~~~~~~~-l~~~~-~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 27 TDDLAADLEALREA-LGIKK-INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp HHHHHHHHHHHHHH-HTTSS-EEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-hCCCC-eEEEEECCChHHHHHHHHH
Confidence 34455555566652 33333 9999999999777666543
No 104
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.17 E-value=23 Score=31.63 Aligned_cols=29 Identities=24% Similarity=0.519 Sum_probs=20.8
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
|++.|.+.|+ .--+++|.|||++=+.+.+
T Consensus 16 vl~aL~e~g~---~~d~i~GtS~GAl~aa~~a 44 (215)
T cd07209 16 VLKALAEAGI---EPDIISGTSIGAINGALIA 44 (215)
T ss_pred HHHHHHHcCC---CCCEEEEECHHHHHHHHHH
Confidence 6777777666 3448999999998655543
No 105
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=46.62 E-value=11 Score=37.00 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=15.1
Q ss_pred cCeeEEeeeChhHHHHH
Q 022338 71 ADQALLSGCSAGGLASI 87 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~ 87 (298)
.++|.++|+|-||..++
T Consensus 227 ~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATAL 243 (379)
T ss_dssp EEEEEEEEETHHHHHHH
T ss_pred hhheeeeecCchHHHHH
Confidence 56899999999998877
No 106
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=46.58 E-value=31 Score=32.22 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=23.8
Q ss_pred eHHHHHHHHHHHHHHhCCCCcCe-eEEeeeChhHHHHHHhH
Q 022338 51 RGQRIWLTAMQDLMAKGMQNADQ-ALLSGCSAGGLASILHC 90 (298)
Q Consensus 51 rG~~i~~avl~~l~~~~~~~a~~-vilsG~SAGG~g~~~~~ 90 (298)
|| .+--.+|+.|.+++.+-.+. =+++|.||||+-+...+
T Consensus 13 RG-i~~~~vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~la 52 (288)
T cd07213 13 KG-IVQLVLLKRLAEEFPSFLDQIDLFAGTSAGSLIALGLA 52 (288)
T ss_pred HH-HHHHHHHHHHHHhCcccccceeEEEEeCHHHHHHHHHH
Confidence 45 34445677777753211122 28999999998766543
No 107
>PLN02934 triacylglycerol lipase
Probab=46.31 E-value=38 Score=34.87 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHh
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRD 95 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~ 95 (298)
.++..|++++++ .++ .+|+++|+|-||-=|.+.+..++.
T Consensus 306 ~v~~~lk~ll~~-~p~-~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 306 AVRSKLKSLLKE-HKN-AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHH-CCC-CeEEEeccccHHHHHHHHHHHHHH
Confidence 355556666663 444 469999999999888888776654
No 108
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.28 E-value=22 Score=34.23 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHH
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 87 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~ 87 (298)
-++++++.|+.+.=-++.+|.++|-|+||.=+.
T Consensus 127 flr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~ 159 (312)
T COG3509 127 FLRALVAKLVNEYGIDPARVYVTGLSNGGRMAN 159 (312)
T ss_pred HHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHH
Confidence 356677777764333688999999999995443
No 109
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=45.72 E-value=18 Score=32.32 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=30.0
Q ss_pred eeEEeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHH
Q 022338 47 QLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFR 94 (298)
Q Consensus 47 ~l~frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~ 94 (298)
.+.-.|.+.++.+++.+.... ....+|++.|+|.||+=+-.-.-.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~-~~~~~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYE-SKIRKISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred hhHHHHHHHHHHHHHhccccc-cccccceEEEecccHHHHHHHHHHhh
Confidence 344467777777777665421 12468999999999986544433333
No 110
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=45.33 E-value=24 Score=33.59 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=23.2
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
-||+.|.++|++ --+++|+|||++=+.+++-
T Consensus 32 GvL~aLee~gi~---~d~v~GtSaGAi~ga~ya~ 62 (306)
T cd07225 32 GVIKALEEAGIP---VDMVGGTSIGAFIGALYAE 62 (306)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 367778777775 3578999999987766553
No 111
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=44.66 E-value=28 Score=33.32 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=21.9
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
|++.|.++|+.- + +++|+|||++-+.+.+-
T Consensus 87 vl~aL~e~~l~~-~--~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 87 VVKALWEQDLLP-R--VISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHcCCCC-C--EEEEEcHHHHHHHHHHc
Confidence 566666667642 2 69999999998877664
No 112
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.63 E-value=26 Score=32.05 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=22.0
Q ss_pred HHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHh
Q 022338 57 LTAMQDLMAKGMQNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 57 ~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~ 89 (298)
--||+.|.+.|+. +==+++|.|||++=+.+.
T Consensus 14 ~Gvl~al~e~~~~--~fd~i~GtSaGAi~a~~~ 44 (266)
T cd07208 14 AGVLDAFLEAGIR--PFDLVIGVSAGALNAASY 44 (266)
T ss_pred HHHHHHHHHcCCC--CCCEEEEECHHHHhHHHH
Confidence 3467777777765 233789999999876553
No 113
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=44.11 E-value=35 Score=28.73 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=16.5
Q ss_pred cCeeEEeeeChhHHHHHHhHH
Q 022338 71 ADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d 91 (298)
.++++|.|.|.||.-++..+.
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred CCceEEEEeCchHHHHHHHHH
Confidence 467999999999987765543
No 114
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=43.80 E-value=68 Score=28.56 Aligned_cols=47 Identities=15% Similarity=0.279 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHh--CCCCcCeeEEeeeChhHHHH---HHhHHHHHhhCCCC
Q 022338 54 RIWLTAMQDLMAK--GMQNADQALLSGCSAGGLAS---ILHCDEFRDLFPKT 100 (298)
Q Consensus 54 ~i~~avl~~l~~~--~~~~a~~vilsG~SAGG~g~---~~~~d~~~~~lp~~ 100 (298)
..++.+++.+.+. ..+..+-++|.-+-+||.|+ .+-.+.+++.+|+.
T Consensus 105 ~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~ 156 (216)
T PF00091_consen 105 EALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKK 156 (216)
T ss_dssp HHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTS
T ss_pred ccccccccccchhhccccccccceecccccceeccccccccchhhhcccccc
Confidence 3778887777662 44889999999888888774 66788899999863
No 115
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=43.78 E-value=34 Score=31.10 Aligned_cols=64 Identities=16% Similarity=0.105 Sum_probs=41.2
Q ss_pred CccccEEEEeCCCCCcccccC-C--CCCCeeEEeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHH
Q 022338 21 FFNWNRVKLRYCDGASFSGDS-Q--NEGAQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLA 85 (298)
Q Consensus 21 f~~wn~V~vpYC~Gd~~~G~~-~--~~~~~l~frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g 85 (298)
|..--.||-||=-......-. . .......=-++.-+++.+++-++ ...+-.-+||+|+|-|+.-
T Consensus 42 F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~-~~n~GRPfILaGHSQGs~~ 108 (207)
T PF11288_consen 42 FNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLA-NYNNGRPFILAGHSQGSMH 108 (207)
T ss_pred hhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHH-hcCCCCCEEEEEeChHHHH
Confidence 555666777765555443333 1 11222233456777788888777 5777788999999999954
No 116
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=43.63 E-value=52 Score=29.30 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=18.3
Q ss_pred CcCeeEEeeeChhHHHHHHhHHH
Q 022338 70 NADQALLSGCSAGGLASILHCDE 92 (298)
Q Consensus 70 ~a~~vilsG~SAGG~g~~~~~d~ 92 (298)
..++++|.|+|.||.-++..+..
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHh
Confidence 35689999999999888766543
No 117
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=43.17 E-value=45 Score=31.62 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=24.5
Q ss_pred CCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeec
Q 022338 69 QNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSD 108 (298)
Q Consensus 69 ~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~D 108 (298)
.+.+.|+|+|. |+.+..+++++.+|. +++..+.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~~-~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFPK-HRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCCC-CeeEecCC
Confidence 35888998874 344668999999996 56655555
No 118
>PRK10279 hypothetical protein; Provisional
Probab=43.14 E-value=28 Score=33.19 Aligned_cols=29 Identities=24% Similarity=0.519 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
||+.|.+.|++ --+++|+|||++=+.+.+
T Consensus 23 VL~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 23 VINALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 67777777775 368999999998766655
No 119
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=43.06 E-value=66 Score=30.89 Aligned_cols=45 Identities=27% Similarity=0.355 Sum_probs=28.9
Q ss_pred eeEEeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCC
Q 022338 47 QLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP 98 (298)
Q Consensus 47 ~l~frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp 98 (298)
...=+|.....-|-+-|. ...|++|.|.|+|+||+-+. ++...++
T Consensus 105 ~~~~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 333444444444444333 34679999999999998887 5555555
No 120
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=42.65 E-value=32 Score=33.39 Aligned_cols=30 Identities=13% Similarity=0.369 Sum_probs=22.0
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
|++-|.++|+.- -+++|+|||++-+.+.+-
T Consensus 86 VlkaL~e~gl~p---~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 86 VVRTLVEHQLLP---RVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHcCCCC---CEEEEECHHHHHHHHHHc
Confidence 567777777643 259999999998776654
No 121
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=40.56 E-value=65 Score=30.51 Aligned_cols=38 Identities=18% Similarity=0.335 Sum_probs=25.1
Q ss_pred Ce-eEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccc
Q 022338 72 DQ-ALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFL 113 (298)
Q Consensus 72 ~~-vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fl 113 (298)
++ ++|.|.|.||.=++..+-. .|..++-.++.|++...
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSARH 164 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCcC
Confidence 45 9999999999776665543 45444445566666543
No 122
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=39.87 E-value=44 Score=32.22 Aligned_cols=37 Identities=22% Similarity=0.377 Sum_probs=23.8
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCC
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK 99 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~ 99 (298)
+++++|.. ....+|+|.|+|.||-=+ -.-.....+|+
T Consensus 135 ~~i~~~fg---e~~~~iilVGHSmGGaIa--v~~a~~k~lps 171 (343)
T KOG2564|consen 135 AVIKELFG---ELPPQIILVGHSMGGAIA--VHTAASKTLPS 171 (343)
T ss_pred HHHHHHhc---cCCCceEEEeccccchhh--hhhhhhhhchh
Confidence 55555542 356779999999998433 23344566775
No 123
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=39.57 E-value=35 Score=34.16 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 87 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~ 87 (298)
.+-+++||++|.....=+.++|.+.|-|.||+-++
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~Av 276 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAV 276 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHH
Confidence 36789999999874333788999999999996553
No 124
>PRK10749 lysophospholipase L2; Provisional
Probab=38.99 E-value=1e+02 Score=28.83 Aligned_cols=21 Identities=19% Similarity=0.123 Sum_probs=16.7
Q ss_pred cCeeEEeeeChhHHHHHHhHH
Q 022338 71 ADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d 91 (298)
.+++.|.|+|.||.-+...+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 467999999999987765543
No 125
>PLN02761 lipase class 3 family protein
Probab=38.85 E-value=67 Score=33.24 Aligned_cols=54 Identities=13% Similarity=0.202 Sum_probs=34.9
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhh-CC------CCceEEEeecCcccccCCCCCchhhHHHHHHH
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDL-FP------KTTKVKCLSDAGMFLDAVDVSGGHTLRNMFAG 130 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~-lp------~~~~v~~l~DsG~fld~~~~~g~~~~~~~~~~ 130 (298)
.-+|+++|+|-||-=|.|.+.+++.. +. ....|.+++=++ +--|+..+..++..
T Consensus 293 ~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGs------PRVGN~~FA~~~d~ 353 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSG------PRVGNLRFKERCDE 353 (527)
T ss_pred CceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCC------CCcCCHHHHHHHHh
Confidence 34799999999999999999888764 22 122355555444 33455566555543
No 126
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=38.76 E-value=65 Score=32.73 Aligned_cols=94 Identities=14% Similarity=-0.011 Sum_probs=61.6
Q ss_pred CCCCCCCCc--cccEEEE--eCCCCCcccccCCCCCCeeEEeHHHHHHHHHHHHHHhCCC--CcCeeEEeeeChhHHHHH
Q 022338 14 KAEENPDFF--NWNRVKL--RYCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLASI 87 (298)
Q Consensus 14 ~~~~NP~f~--~wn~V~v--pYC~Gd~~~G~~~~~~~~l~frG~~i~~avl~~l~~~~~~--~a~~vilsG~SAGG~g~~ 87 (298)
.-..||+=+ ..|++|| |==+|-|++.+..+....-.....++..++++|+.+ ++ .-....++|.|-+|.=+.
T Consensus 106 tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP 183 (454)
T KOG1282|consen 106 TLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVP 183 (454)
T ss_pred cceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehH
Confidence 345677322 2677888 566666666665422233344568899999999986 34 356899999999998777
Q ss_pred HhHHHHHhhCC----CCceEEEeecC
Q 022338 88 LHCDEFRDLFP----KTTKVKCLSDA 109 (298)
Q Consensus 88 ~~~d~~~~~lp----~~~~v~~l~Ds 109 (298)
.-++.|.+.=. ....+++++=.
T Consensus 184 ~La~~I~~~N~~~~~~~iNLkG~~IG 209 (454)
T KOG1282|consen 184 ALAQEILKGNKKCCKPNINLKGYAIG 209 (454)
T ss_pred HHHHHHHhccccccCCcccceEEEec
Confidence 77777776532 12456665533
No 127
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=38.38 E-value=65 Score=31.62 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCC
Q 022338 57 LTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKT 100 (298)
Q Consensus 57 ~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~ 100 (298)
+++++||.+.|++ ++-|+|-|.||. ++.-.....|..
T Consensus 163 ~~Ll~Wl~~~G~~---~~g~~G~SmGG~----~A~laa~~~p~p 199 (348)
T PF09752_consen 163 RALLHWLEREGYG---PLGLTGISMGGH----MAALAASNWPRP 199 (348)
T ss_pred HHHHHHHHhcCCC---ceEEEEechhHh----hHHhhhhcCCCc
Confidence 4558898887655 799999999995 555666777763
No 128
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=37.64 E-value=26 Score=33.63 Aligned_cols=118 Identities=17% Similarity=0.176 Sum_probs=55.9
Q ss_pred CCeeEEeHH-HHHHHHHHHHHHhCCC--CcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCC---
Q 022338 45 GAQLYFRGQ-RIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDV--- 118 (298)
Q Consensus 45 ~~~l~frG~-~i~~avl~~l~~~~~~--~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~--- 118 (298)
..+.|||+- ......++.|. .++ ++++|.++|.|-||.=|++-+- |.+.++ .++++--|+=|.+..
T Consensus 147 ~e~~yyr~~~~D~~ravd~l~--slpevD~~rI~v~G~SqGG~lal~~aa-----Ld~rv~-~~~~~vP~l~d~~~~~~~ 218 (320)
T PF05448_consen 147 PEDYYYRRVYLDAVRAVDFLR--SLPEVDGKRIGVTGGSQGGGLALAAAA-----LDPRVK-AAAADVPFLCDFRRALEL 218 (320)
T ss_dssp TTT-HHHHHHHHHHHHHHHHH--TSTTEEEEEEEEEEETHHHHHHHHHHH-----HSST-S-EEEEESESSSSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH--hCCCcCcceEEEEeecCchHHHHHHHH-----hCcccc-EEEecCCCccchhhhhhc
Confidence 456778773 33333355555 466 5899999999999976655432 322221 234454455453211
Q ss_pred ----CchhhHHHHHHHHHHhhhccccCCcccccCCCCCCCccchhHhhccCcchhhhhhhhhH
Q 022338 119 ----SGGHTLRNMFAGVVSLQEVQKNLPITCTSQLDPTSCFFPQNLVANIKTPMFLLNAAYDA 177 (298)
Q Consensus 119 ----~g~~~~~~~~~~~~~l~~~~~~lp~~C~~~~~~~~C~f~~~~~~~i~tP~Fil~s~YD~ 177 (298)
.+-..++.+++.. +..++.-.+-++...=|=..+..+.|+.|+++--++.|.
T Consensus 219 ~~~~~~y~~~~~~~~~~-------d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~ 274 (320)
T PF05448_consen 219 RADEGPYPEIRRYFRWR-------DPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDP 274 (320)
T ss_dssp T--STTTHHHHHHHHHH-------SCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-S
T ss_pred CCccccHHHHHHHHhcc-------CCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCC
Confidence 1112233333200 000000000000001122457888999999999999884
No 129
>PRK11071 esterase YqiA; Provisional
Probab=37.35 E-value=60 Score=28.23 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
.+.+.++++++. ++ .++++|.|+|.||.=++.-+
T Consensus 46 ~~~~~l~~l~~~-~~-~~~~~lvG~S~Gg~~a~~~a 79 (190)
T PRK11071 46 DAAELLESLVLE-HG-GDPLGLVGSSLGGYYATWLS 79 (190)
T ss_pred HHHHHHHHHHHH-cC-CCCeEEEEECHHHHHHHHHH
Confidence 455666666662 32 35799999999998666443
No 130
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=37.33 E-value=74 Score=31.37 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCC
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAV 116 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~ 116 (298)
++.+=+|-...|+. +.+|.|+|-||+=+..++ -.+|+.++-.+|+|..=|-..+
T Consensus 147 vesiE~WR~~~~L~---KmilvGHSfGGYLaa~YA----lKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 147 VESIEQWRKKMGLE---KMILVGHSFGGYLAAKYA----LKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred HHHHHHHHHHcCCc---ceeEeeccchHHHHHHHH----HhChHhhceEEEecccccccCC
Confidence 33444444444554 799999999997655543 3567777777788764454443
No 131
>PLN02578 hydrolase
Probab=37.22 E-value=1.1e+02 Score=29.16 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=23.9
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeec-Ccccc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSD-AGMFL 113 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~D-sG~fl 113 (298)
.++++|.|.|.||+=++..+-.. |..++-.++.+ +|.|.
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~----p~~v~~lvLv~~~~~~~ 190 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGY----PELVAGVALLNSAGQFG 190 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhC----hHhcceEEEECCCcccc
Confidence 46799999999998666555443 43333233334 45554
No 132
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=37.21 E-value=95 Score=28.25 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=17.6
Q ss_pred eeEEeeeChhHHHHHHhHHHHHhhC
Q 022338 73 QALLSGCSAGGLASILHCDEFRDLF 97 (298)
Q Consensus 73 ~vilsG~SAGG~g~~~~~d~~~~~l 97 (298)
.++|+|+|=||.=|.+-+-.+.+.+
T Consensus 85 ~i~v~GHSkGGnLA~yaa~~~~~~~ 109 (224)
T PF11187_consen 85 KIYVTGHSKGGNLAQYAAANCDDEI 109 (224)
T ss_pred CEEEEEechhhHHHHHHHHHccHHH
Confidence 5999999999976665555543333
No 133
>PRK10985 putative hydrolase; Provisional
Probab=37.16 E-value=1.3e+02 Score=28.14 Aligned_cols=34 Identities=15% Similarity=-0.064 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHh
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~ 89 (298)
..+.++++++.++ ++ .+++++.|.|.||.=+...
T Consensus 115 ~D~~~~i~~l~~~-~~-~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 115 EDARFFLRWLQRE-FG-HVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred HHHHHHHHHHHHh-CC-CCCEEEEEecchHHHHHHH
Confidence 5566778888763 33 3569999999999644333
No 134
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=37.09 E-value=40 Score=31.60 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=22.2
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
||+.|.+.|++ -=+++|.|||++-+.+++-
T Consensus 28 VL~aLeE~gi~---~d~v~GtSaGAiiga~ya~ 57 (269)
T cd07227 28 ILQALEEAGIP---IDAIGGTSIGSFVGGLYAR 57 (269)
T ss_pred HHHHHHHcCCC---ccEEEEECHHHHHHHHHHc
Confidence 56667666775 4578999999987766654
No 135
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=37.07 E-value=39 Score=33.66 Aligned_cols=31 Identities=26% Similarity=0.563 Sum_probs=22.9
Q ss_pred HHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 58 TAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 58 avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
-|++-|.++|+. ++ +++|+|||++-+.+.+-
T Consensus 84 GVlkaL~e~gll-p~--iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLL-PN--VISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCC-CC--EEEEECHHHHHHHHHHc
Confidence 467778877754 22 59999999998776654
No 136
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=36.87 E-value=92 Score=26.92 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=17.5
Q ss_pred CeeEEeeeChhHHHHHHhHH
Q 022338 72 DQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d 91 (298)
+.++|.|+|.|.+.++-+..
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHh
Confidence 44999999999999988876
No 137
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.79 E-value=41 Score=31.17 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=20.2
Q ss_pred HHHHHHHhCCCCc-CeeEEeeeChhHHHHHHhH
Q 022338 59 AMQDLMAKGMQNA-DQALLSGCSAGGLASILHC 90 (298)
Q Consensus 59 vl~~l~~~~~~~a-~~vilsG~SAGG~g~~~~~ 90 (298)
|++-|++.+..-- +--.++|.|||++-+.+.+
T Consensus 18 Vl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSERAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHHhCcchhccCCEEEEEcHHHHHHHHHH
Confidence 5566666442211 1236899999999877664
No 138
>CHL00024 psbI photosystem II protein I
Probab=36.29 E-value=21 Score=23.49 Aligned_cols=12 Identities=50% Similarity=0.756 Sum_probs=11.2
Q ss_pred cccCCCCCCCCC
Q 022338 8 TGILSNKAEENP 19 (298)
Q Consensus 8 ~Gils~~~~~NP 19 (298)
-|.||+|+..||
T Consensus 21 fGFlsnDp~RnP 32 (36)
T CHL00024 21 FGFLSNDPGRNP 32 (36)
T ss_pred ccccCCCCCCCC
Confidence 489999999999
No 139
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=36.24 E-value=43 Score=33.34 Aligned_cols=30 Identities=20% Similarity=0.405 Sum_probs=21.2
Q ss_pred HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 59 AMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 59 vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
|++-|.++|+.-- +++|+|||++-+.+.+-
T Consensus 101 v~kaL~e~gl~p~---~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 101 VVKALWLRGLLPR---IITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHcCCCCc---eEEEecHHHHHHHHHHc
Confidence 5667777675432 59999999987666554
No 140
>PRK03204 haloalkane dehalogenase; Provisional
Probab=35.93 E-value=77 Score=29.05 Aligned_cols=52 Identities=13% Similarity=0.111 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcc
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGM 111 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 111 (298)
..+.+.+.+++++ + ..++++|.|+|.||.=++..+ ...|..++-.++.+++.
T Consensus 85 ~~~~~~~~~~~~~-~-~~~~~~lvG~S~Gg~va~~~a----~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 85 DEHARVIGEFVDH-L-GLDRYLSMGQDWGGPISMAVA----VERADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHHHHH-h-CCCCEEEEEECccHHHHHHHH----HhChhheeEEEEECccc
Confidence 3455556666653 3 236799999999997554443 23443333334445543
No 141
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=35.91 E-value=21 Score=23.66 Aligned_cols=12 Identities=42% Similarity=0.695 Sum_probs=11.2
Q ss_pred cccCCCCCCCCC
Q 022338 8 TGILSNKAEENP 19 (298)
Q Consensus 8 ~Gils~~~~~NP 19 (298)
=|.||+|+..||
T Consensus 21 FGflsnDP~RnP 32 (38)
T PRK02655 21 FGFLSSDPTRNP 32 (38)
T ss_pred cccCCCCCCCCC
Confidence 489999999999
No 142
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.71 E-value=23 Score=31.78 Aligned_cols=23 Identities=35% Similarity=0.693 Sum_probs=15.5
Q ss_pred eeEEeeeChhHHHHHHhHHHHHhhCCC
Q 022338 73 QALLSGCSAGGLASILHCDEFRDLFPK 99 (298)
Q Consensus 73 ~vilsG~SAGG~g~~~~~d~~~~~lp~ 99 (298)
.-+++|||.||+ |+-.+.=+.|.
T Consensus 102 s~~~sgcsmGay----hA~nfvfrhP~ 124 (227)
T COG4947 102 STIVSGCSMGAY----HAANFVFRHPH 124 (227)
T ss_pred Cccccccchhhh----hhhhhheeChh
Confidence 378999999995 44444444553
No 143
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=35.14 E-value=88 Score=27.06 Aligned_cols=21 Identities=29% Similarity=0.224 Sum_probs=16.3
Q ss_pred cCeeEEeeeChhHHHHHHhHH
Q 022338 71 ADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d 91 (298)
.++++|.|.|.||.=++..+-
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHH
Confidence 456999999999987666543
No 144
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=35.11 E-value=52 Score=32.25 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHH
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFR 94 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~ 94 (298)
+++.|+++... +.++|+|.|+|.||+=+........
T Consensus 106 lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 106 LKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred HHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhcc
Confidence 45555555442 2789999999999988776666553
No 145
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=34.99 E-value=88 Score=30.17 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=42.6
Q ss_pred eEEeHHHHHHHH-------HHHHHH-hCCCCcCeeEEeeeChhHHHHHHhHHHHHh--hCCCCceEEEeecCcccccCC
Q 022338 48 LYFRGQRIWLTA-------MQDLMA-KGMQNADQALLSGCSAGGLASILHCDEFRD--LFPKTTKVKCLSDAGMFLDAV 116 (298)
Q Consensus 48 l~frG~~i~~av-------l~~l~~-~~~~~a~~vilsG~SAGG~g~~~~~d~~~~--~lp~~~~v~~l~DsG~fld~~ 116 (298)
.|.+...+++.| |+.|.. .|++ .++|-|.|+|-||--+-+-..++.. .+ .++.+|.=||..++..
T Consensus 119 ~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~-~~~ihlIGhSLGAHvaG~aG~~~~~~~ki---~rItgLDPAgP~F~~~ 193 (331)
T PF00151_consen 119 NYPQAVANTRLVGRQLAKFLSFLINNFGVP-PENIHLIGHSLGAHVAGFAGKYLKGGGKI---GRITGLDPAGPLFENN 193 (331)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT---S---SEEEEES-B-TTTTTS
T ss_pred cccchhhhHHHHHHHHHHHHHHHHhhcCCC-hhHEEEEeeccchhhhhhhhhhccCccee---eEEEecCcccccccCC
Confidence 354554444443 556663 3554 7889999999999988888888877 55 3799999899887654
No 146
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=34.85 E-value=40 Score=34.83 Aligned_cols=39 Identities=26% Similarity=0.218 Sum_probs=30.2
Q ss_pred eHHHHHHHHHHHHHHh--CC-CCcCeeEEeeeChhHHHHHHh
Q 022338 51 RGQRIWLTAMQDLMAK--GM-QNADQALLSGCSAGGLASILH 89 (298)
Q Consensus 51 rG~~i~~avl~~l~~~--~~-~~a~~vilsG~SAGG~g~~~~ 89 (298)
+|..--+-+|.|+.++ -| +++++|-|.|.|||+-.+.+|
T Consensus 194 mGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aH 235 (601)
T KOG4389|consen 194 MGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAH 235 (601)
T ss_pred cchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhhe
Confidence 4666667778888773 23 389999999999999776665
No 147
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=34.53 E-value=1.3e+02 Score=28.82 Aligned_cols=58 Identities=21% Similarity=0.299 Sum_probs=40.3
Q ss_pred CeeEEeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCC-CceEEEeecCcc
Q 022338 46 AQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK-TTKVKCLSDAGM 111 (298)
Q Consensus 46 ~~l~frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~-~~~v~~l~DsG~ 111 (298)
..++.....-.-+...+|.++ .=+|.|.|.|+ ++.-+-.+++.++. ..-|.+++|+|.
T Consensus 237 D~v~~V~d~~A~~~~r~La~~------eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 237 DEVIRVSDEEAIATARRLARE------EGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred ceEEEECHHHHHHHHHHHHHH------hCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 345555666666667777763 45788888886 55666778888874 345888899984
No 148
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=34.17 E-value=1e+02 Score=29.64 Aligned_cols=27 Identities=15% Similarity=0.449 Sum_probs=21.1
Q ss_pred CCCcCeeEEeeeChhHHHHHHhHHHHHhhCCC
Q 022338 68 MQNADQALLSGCSAGGLASILHCDEFRDLFPK 99 (298)
Q Consensus 68 ~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~ 99 (298)
..+.++|+|+|.+|- +..+++++.+|.
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~~ 315 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYSD 315 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcCC
Confidence 456788999987764 356999999985
No 149
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=34.14 E-value=80 Score=29.76 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=21.9
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCc
Q 022338 72 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 110 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 110 (298)
+.++|.|.|.||.=++..+- ..|..++-.++.+++
T Consensus 138 ~~~~lvG~SmGG~vA~~~A~----~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 138 RLHAFVGYSYGALVGLQFAS----RHPARVRTLVVVSGA 172 (343)
T ss_pred cceEEEEECHHHHHHHHHHH----HChHhhheEEEECcc
Confidence 34579999999976655443 345444444555665
No 150
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=34.10 E-value=2.2e+02 Score=29.41 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=54.1
Q ss_pred CCCCCCc--cccEEEE--eCCCCCccc-ccCCCCCCeeEEeH-----HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHH
Q 022338 16 EENPDFF--NWNRVKL--RYCDGASFS-GDSQNEGAQLYFRG-----QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLA 85 (298)
Q Consensus 16 ~~NP~f~--~wn~V~v--pYC~Gd~~~-G~~~~~~~~l~frG-----~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g 85 (298)
..||+=+ +.+.||| |-=||-+.+ |+.- +.-|.| +...+-+++++-. -........|+|.|-||.=
T Consensus 137 ~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~----~~d~~~~~~D~~~~~~~f~~~fp~-~~r~~~~~~L~GESYgg~y 211 (498)
T COG2939 137 PDNPGSWLDFADLVFIDQPVGTGFSRALGDEK----KKDFEGAGKDVYSFLRLFFDKFPH-YARLLSPKFLAGESYGGHY 211 (498)
T ss_pred CCCccccccCCceEEEecCcccCccccccccc----ccchhccchhHHHHHHHHHHHHHH-HhhhcCceeEeeccccchh
Confidence 3588433 3679999 566666665 3221 111111 2345555666654 4556678999999999987
Q ss_pred HHHhHHHHHhh---CCCCceEEEeec-Ccc
Q 022338 86 SILHCDEFRDL---FPKTTKVKCLSD-AGM 111 (298)
Q Consensus 86 ~~~~~d~~~~~---lp~~~~v~~l~D-sG~ 111 (298)
...-+..+.+. +...+.+..+.+ +|.
T Consensus 212 ip~~A~~L~~~~~~~~~~~nlssvligng~ 241 (498)
T COG2939 212 IPVFAHELLEDNIALNGNVNLSSVLIGNGL 241 (498)
T ss_pred hHHHHHHHHHhccccCCceEeeeeeecCCc
Confidence 77777777764 333445555555 353
No 151
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=34.03 E-value=45 Score=29.41 Aligned_cols=26 Identities=23% Similarity=0.495 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhCCCCcCeeEEeeeCh
Q 022338 56 WLTAMQDLMAKGMQNADQALLSGCSA 81 (298)
Q Consensus 56 ~~avl~~l~~~~~~~a~~vilsG~SA 81 (298)
+++++++|+++.--++.++++.|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 67889999987656788999999994
No 152
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=33.87 E-value=49 Score=31.38 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
.+.++++++.+. ...+++.|.|.|.||.-++..+
T Consensus 121 ~~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 121 YIDKCVDYICRT--SKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHH
Confidence 366778887763 2457899999999998776543
No 153
>PRK03592 haloalkane dehalogenase; Provisional
Probab=33.46 E-value=1.4e+02 Score=27.11 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=22.9
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecC
Q 022338 72 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 109 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 109 (298)
++++|.|.|.||.=++..+ ...|..++-.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWA----ARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHHH----HhChhheeEEEEECC
Confidence 6799999999998776443 456654444444454
No 154
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=33.34 E-value=1.1e+02 Score=25.16 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=15.9
Q ss_pred eEEeeeChhHHHHHHhHHHHHh
Q 022338 74 ALLSGCSAGGLASILHCDEFRD 95 (298)
Q Consensus 74 vilsG~SAGG~g~~~~~d~~~~ 95 (298)
++|.|+|.||.-+...+....+
T Consensus 90 ~~l~G~S~Gg~~~~~~~~~~p~ 111 (282)
T COG0596 90 VVLVGHSMGGAVALALALRHPD 111 (282)
T ss_pred eEEEEecccHHHHHHHHHhcch
Confidence 9999999998666655544333
No 155
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=33.07 E-value=63 Score=30.83 Aligned_cols=36 Identities=14% Similarity=0.292 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHh-CCCCcCee-EEeeeChhHHHHHHhH
Q 022338 55 IWLTAMQDLMAK-GMQNADQA-LLSGCSAGGLASILHC 90 (298)
Q Consensus 55 i~~avl~~l~~~-~~~~a~~v-ilsG~SAGG~g~~~~~ 90 (298)
+...||+.|.+. |.+-.+.+ +++|.|+||+=+.+.+
T Consensus 13 ~~i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la 50 (312)
T cd07212 13 VLIQMLIAIEKALGRPIRELFDWIAGTSTGGILALALL 50 (312)
T ss_pred HHHHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHH
Confidence 334456666653 44322323 7999999997666544
No 156
>PLN02872 triacylglycerol lipase
Probab=32.50 E-value=71 Score=31.55 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=26.1
Q ss_pred eHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHH
Q 022338 51 RGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASI 87 (298)
Q Consensus 51 rG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~ 87 (298)
.+..-+.|+++++++. . .+++.+.|+|.||.-++
T Consensus 142 ~a~~Dl~a~id~i~~~--~-~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 142 LALYDLAEMIHYVYSI--T-NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred HHHHHHHHHHHHHHhc--c-CCceEEEEECHHHHHHH
Confidence 3446778888888763 2 36899999999998765
No 157
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=31.64 E-value=83 Score=29.68 Aligned_cols=18 Identities=28% Similarity=0.329 Sum_probs=14.5
Q ss_pred CeeEEeeeChhHHHHHHh
Q 022338 72 DQALLSGCSAGGLASILH 89 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~ 89 (298)
.+++|.|.|.||.-++..
T Consensus 162 ~~~~LvGhSmGG~val~~ 179 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKV 179 (349)
T ss_pred CCEEEEEeccchHHHHHH
Confidence 469999999999876543
No 158
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=31.62 E-value=60 Score=29.53 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
..-.+++++||.+ .-+++....|+|.|-|++=+++-+
T Consensus 85 ~~Da~aaldW~~~-~hp~s~~~~l~GfSFGa~Ia~~la 121 (210)
T COG2945 85 LEDAAAALDWLQA-RHPDSASCWLAGFSFGAYIAMQLA 121 (210)
T ss_pred HHHHHHHHHHHHh-hCCCchhhhhcccchHHHHHHHHH
Confidence 6778999999998 456777778999999997655433
No 159
>PRK06489 hypothetical protein; Provisional
Probab=30.90 E-value=1.2e+02 Score=28.91 Aligned_cols=19 Identities=26% Similarity=0.480 Sum_probs=14.1
Q ss_pred Cee-EEeeeChhHHHHHHhH
Q 022338 72 DQA-LLSGCSAGGLASILHC 90 (298)
Q Consensus 72 ~~v-ilsG~SAGG~g~~~~~ 90 (298)
+++ +|.|.|.||.=++..+
T Consensus 153 ~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 153 KHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred CceeEEEEECHHHHHHHHHH
Confidence 345 6999999997666544
No 160
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=30.84 E-value=1.2e+02 Score=29.29 Aligned_cols=49 Identities=16% Similarity=0.287 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCCCcCe-eEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccc
Q 022338 58 TAMQDLMAKGMQNADQ-ALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 112 (298)
Q Consensus 58 avl~~l~~~~~~~a~~-vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 112 (298)
+.+..|++ .++- ++ ++|.|.|.||.=++..+.. .|..++-.++.|++..
T Consensus 134 ~~~~~~l~-~l~~-~~~~~lvG~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 134 RAQARLLD-ALGI-TRLAAVVGGSMGGMQALEWAID----YPDRVRSALVIASSAR 183 (379)
T ss_pred HHHHHHHH-HhCC-CCceEEEEECHHHHHHHHHHHh----ChHhhhEEEEECCCcc
Confidence 33444444 2322 44 5899999999766655544 4443444444465543
No 161
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=30.64 E-value=24 Score=37.07 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=32.7
Q ss_pred EeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHH
Q 022338 50 FRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGL 84 (298)
Q Consensus 50 frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~ 84 (298)
.+...-+.||.++|..+|+..|+++=+-|.|=|||
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGL 512 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGL 512 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCce
Confidence 56778899999999999999999999999999997
No 162
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=30.51 E-value=17 Score=33.82 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhh
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
.--+++|++|...-.-+-.+++|.|-|-||.-|+.-+...+++
T Consensus 131 lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r 173 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR 173 (300)
T ss_pred ccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh
Confidence 3478999999986566678899999999996555444444443
No 163
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=30.26 E-value=84 Score=30.25 Aligned_cols=67 Identities=16% Similarity=0.213 Sum_probs=37.9
Q ss_pred cccEEEEeCCCCCcccccCCCCCCeeEEeHHHHHHHHHHHHHHh--CCCCcCeeEEeeeChhHHHHHHhHHHHHh
Q 022338 23 NWNRVKLRYCDGASFSGDSQNEGAQLYFRGQRIWLTAMQDLMAK--GMQNADQALLSGCSAGGLASILHCDEFRD 95 (298)
Q Consensus 23 ~wn~V~vpYC~Gd~~~G~~~~~~~~l~frG~~i~~avl~~l~~~--~~~~a~~vilsG~SAGG~g~~~~~d~~~~ 95 (298)
+|..|.+.-.+ +|.|--.. . .=|=..-+.+.+++|... |....++|+|.|+|-|.--++.+......
T Consensus 63 ~wsl~q~~LsS--Sy~G~G~~---S-L~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 63 GWSLFQVQLSS--SYSGWGTS---S-LDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp T-EEEEE--GG--GBTTS-S------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred CeEEEEEEecC--ccCCcCcc---h-hhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 68888777654 34443220 0 001135678889999885 44578999999999999988877766553
No 164
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=30.18 E-value=48 Score=33.01 Aligned_cols=56 Identities=20% Similarity=0.272 Sum_probs=32.5
Q ss_pred EeHHHHHHH--HHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccc
Q 022338 50 FRGQRIWLT--AMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 112 (298)
Q Consensus 50 frG~~i~~a--vl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 112 (298)
+-|...++. ++|+|.+...-++++|-++|.|.||+=|++- ..|.. +|++.+=+|++
T Consensus 202 ~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L-----aALDd--RIka~v~~~~l 259 (390)
T PF12715_consen 202 LAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL-----AALDD--RIKATVANGYL 259 (390)
T ss_dssp HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH-----HHH-T--T--EEEEES-B
T ss_pred HHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH-----HHcch--hhHhHhhhhhh
Confidence 344444443 4777765444479999999999999766543 34433 35555555654
No 165
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=29.33 E-value=98 Score=26.76 Aligned_cols=21 Identities=24% Similarity=0.178 Sum_probs=16.9
Q ss_pred cCeeEEeeeChhHHHHHHhHH
Q 022338 71 ADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d 91 (298)
-++++|.|.|.||.-++.-+-
T Consensus 65 ~~~~~lvG~S~Gg~va~~~a~ 85 (242)
T PRK11126 65 ILPYWLVGYSLGGRIAMYYAC 85 (242)
T ss_pred CCCeEEEEECHHHHHHHHHHH
Confidence 578999999999977665544
No 166
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=29.13 E-value=87 Score=31.77 Aligned_cols=59 Identities=24% Similarity=0.248 Sum_probs=40.4
Q ss_pred eeEEeHHHHHHHHHHH-------HHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCC--------CceEEEeecC
Q 022338 47 QLYFRGQRIWLTAMQD-------LMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPK--------TTKVKCLSDA 109 (298)
Q Consensus 47 ~l~frG~~i~~avl~~-------l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~--------~~~v~~l~Ds 109 (298)
...|-|+.+.+..|++ |++.--.++..||..|.|.|| +-+.++|-.+|. +|-|.-+.|.
T Consensus 135 ~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGG----MLaAWfRlKYPHiv~GAlAaSAPvl~f~d~ 208 (492)
T KOG2183|consen 135 DARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGG----MLAAWFRLKYPHIVLGALAASAPVLYFEDT 208 (492)
T ss_pred ChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhh----HHHHHHHhcChhhhhhhhhccCceEeecCC
Confidence 4557788888777665 333223468889999999999 566777777773 4556555554
No 167
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=28.98 E-value=63 Score=32.08 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=19.1
Q ss_pred HHHHHHHhCCCCc-CeeEEeeeChhHHHHHHhH
Q 022338 59 AMQDLMAKGMQNA-DQALLSGCSAGGLASILHC 90 (298)
Q Consensus 59 vl~~l~~~~~~~a-~~vilsG~SAGG~g~~~~~ 90 (298)
|++.|.+.+..-- .--.++|.|||++-+.+.+
T Consensus 30 Vl~aL~E~gp~ll~~~d~IaGtSAGALvAAl~a 62 (382)
T cd07219 30 VVDALRDLAPRMLETAHRVAGTSAGSVIAALVV 62 (382)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHHH
Confidence 4556655432111 1124899999999876654
No 168
>COG4099 Predicted peptidase [General function prediction only]
Probab=28.58 E-value=99 Score=30.19 Aligned_cols=42 Identities=19% Similarity=0.358 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHh-CCCCcCeeEEeeeChhHHHHHHhHHHHHhhC
Q 022338 55 IWLTAMQDLMAK-GMQNADQALLSGCSAGGLASILHCDEFRDLF 97 (298)
Q Consensus 55 i~~avl~~l~~~-~~~~a~~vilsG~SAGG~g~~~~~d~~~~~l 97 (298)
-++.+.+.|.+. +. +-.+|.++|-|-||.|++.-...+-+.|
T Consensus 252 ~idli~~vlas~ynI-D~sRIYviGlSrG~~gt~al~~kfPdfF 294 (387)
T COG4099 252 KIDLILEVLASTYNI-DRSRIYVIGLSRGGFGTWALAEKFPDFF 294 (387)
T ss_pred HHHHHHHHHhhccCc-ccceEEEEeecCcchhhHHHHHhCchhh
Confidence 345555566663 33 4578999999999999987665554444
No 169
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.56 E-value=76 Score=34.64 Aligned_cols=19 Identities=26% Similarity=0.461 Sum_probs=16.2
Q ss_pred CCCcCeeEEeeeChhHHHH
Q 022338 68 MQNADQALLSGCSAGGLAS 86 (298)
Q Consensus 68 ~~~a~~vilsG~SAGG~g~ 86 (298)
.+.++.|+|.|+|.||+=|
T Consensus 178 ~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 178 SPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred CCCCceEEEEeccchhHHH
Confidence 4568999999999999854
No 170
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=28.52 E-value=61 Score=30.01 Aligned_cols=15 Identities=27% Similarity=0.335 Sum_probs=13.2
Q ss_pred CcCeeEEeeeChhHH
Q 022338 70 NADQALLSGCSAGGL 84 (298)
Q Consensus 70 ~a~~vilsG~SAGG~ 84 (298)
.-.+++|.|+|.|++
T Consensus 82 ~~~~liLiGHSIGay 96 (266)
T PF10230_consen 82 PNVKLILIGHSIGAY 96 (266)
T ss_pred CCCcEEEEeCcHHHH
Confidence 667899999999985
No 171
>PHA02857 monoglyceride lipase; Provisional
Probab=28.48 E-value=1.1e+02 Score=27.39 Aligned_cols=21 Identities=33% Similarity=0.324 Sum_probs=16.3
Q ss_pred cCeeEEeeeChhHHHHHHhHH
Q 022338 71 ADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d 91 (298)
.+.++|.|.|.||.=++..+.
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAY 116 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHH
Confidence 456999999999987665543
No 172
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=28.32 E-value=64 Score=31.85 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHh---C-CC---CcCeeEEeeeChhHHHHHH
Q 022338 54 RIWLTAMQDLMAK---G-MQ---NADQALLSGCSAGGLASIL 88 (298)
Q Consensus 54 ~i~~avl~~l~~~---~-~~---~a~~vilsG~SAGG~g~~~ 88 (298)
.-+.++|++|++. . +. ++.+|.+.|.|-||+.++.
T Consensus 134 ~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~ 175 (365)
T COG4188 134 LDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAME 175 (365)
T ss_pred ccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHH
Confidence 3467788888874 2 22 6889999999999987653
No 173
>PLN02511 hydrolase
Probab=28.25 E-value=81 Score=30.71 Aligned_cols=37 Identities=8% Similarity=0.034 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
..-+++++++|..+ +++ .++++.|.|.||.-++..+-
T Consensus 156 ~~Dl~~~i~~l~~~-~~~-~~~~lvG~SlGg~i~~~yl~ 192 (388)
T PLN02511 156 TGDLRQVVDHVAGR-YPS-ANLYAAGWSLGANILVNYLG 192 (388)
T ss_pred hHHHHHHHHHHHHH-CCC-CCEEEEEechhHHHHHHHHH
Confidence 45677888888763 443 46999999999976655443
No 174
>PRK07581 hypothetical protein; Validated
Probab=27.91 E-value=1e+02 Score=28.82 Aligned_cols=25 Identities=24% Similarity=0.422 Sum_probs=17.6
Q ss_pred Ce-eEEeeeChhHHHHHHhHHHHHhh
Q 022338 72 DQ-ALLSGCSAGGLASILHCDEFRDL 96 (298)
Q Consensus 72 ~~-vilsG~SAGG~g~~~~~d~~~~~ 96 (298)
++ ++|.|.|.||.=++..+-.--++
T Consensus 123 ~~~~~lvG~S~GG~va~~~a~~~P~~ 148 (339)
T PRK07581 123 ERLALVVGWSMGAQQTYHWAVRYPDM 148 (339)
T ss_pred CceEEEEEeCHHHHHHHHHHHHCHHH
Confidence 45 68999999998877655443333
No 175
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=27.89 E-value=1.8e+02 Score=27.82 Aligned_cols=49 Identities=14% Similarity=0.155 Sum_probs=30.3
Q ss_pred EeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEE
Q 022338 50 FRGQRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKC 105 (298)
Q Consensus 50 frG~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~ 105 (298)
|--..-+..+.+...+. ... .+.|.|.|.||+=++. ++..+|+.++..+
T Consensus 109 y~~~~~v~~i~~~~~~~--~~~-~~~lvghS~Gg~va~~----~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 109 YTLRELVELIRRFVKEV--FVE-PVSLVGHSLGGIVALK----AAAYYPETVDSLV 157 (326)
T ss_pred eehhHHHHHHHHHHHhh--cCc-ceEEEEeCcHHHHHHH----HHHhCccccccee
Confidence 55555555555544442 223 3999999999976655 4556776655555
No 176
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=27.63 E-value=1.8e+02 Score=26.12 Aligned_cols=32 Identities=9% Similarity=0.092 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHhC--CCCcCeeEEeeeChhH
Q 022338 52 GQRIWLTAMQDLMAKG--MQNADQALLSGCSAGG 83 (298)
Q Consensus 52 G~~i~~avl~~l~~~~--~~~a~~vilsG~SAGG 83 (298)
+...++..+++|.... -.+++.|+++|-...+
T Consensus 15 ~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~ 48 (243)
T cd07386 15 LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDG 48 (243)
T ss_pred hHHHHHHHHHHHcCCcccccCccEEEEeCCcccc
Confidence 3456677777765410 1257999999987765
No 177
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=27.43 E-value=99 Score=30.41 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
.+.++++.+... .+ -..++|.|+|.||+-++..+
T Consensus 193 Dl~~~l~~l~~~-~~-~~~i~lvGhSmGG~ial~~a 226 (395)
T PLN02652 193 DTEAFLEKIRSE-NP-GVPCFLFGHSTGGAVVLKAA 226 (395)
T ss_pred HHHHHHHHHHHh-CC-CCCEEEEEECHHHHHHHHHH
Confidence 345556665542 22 23699999999999887644
No 178
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=27.21 E-value=25 Score=23.11 Aligned_cols=12 Identities=50% Similarity=0.756 Sum_probs=11.0
Q ss_pred cccCCCCCCCCC
Q 022338 8 TGILSNKAEENP 19 (298)
Q Consensus 8 ~Gils~~~~~NP 19 (298)
-|.+|+|+..||
T Consensus 21 fGflsnDp~RnP 32 (36)
T PF02532_consen 21 FGFLSNDPGRNP 32 (36)
T ss_dssp HHHHTTCTTSSS
T ss_pred ccccCCCCCCCC
Confidence 489999999999
No 179
>PRK11761 cysM cysteine synthase B; Provisional
Probab=27.11 E-value=1.1e+02 Score=28.69 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=26.6
Q ss_pred CeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcc
Q 022338 72 DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGM 111 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 111 (298)
+.+++-++||.++++.+.. ++.++...-|.+++|+|.
T Consensus 250 ~gi~ve~ssga~laaa~~~---~~~~~~~~vV~v~~d~g~ 286 (296)
T PRK11761 250 EGIFCGVSSGGAVAAALRI---ARENPNAVIVAIICDRGD 286 (296)
T ss_pred hCceEchhHHHHHHHHHHH---HHHCCCCeEEEEECCCCc
Confidence 4567777888888888863 344665556788899993
No 180
>PRK04123 ribulokinase; Provisional
Probab=26.75 E-value=1.3e+02 Score=30.68 Aligned_cols=67 Identities=15% Similarity=0.302 Sum_probs=40.8
Q ss_pred EEEEeCCCCCcccccCC---CC-------CCeeEEeHHHHHHHHHHHH-----------HHhCCCCcCeeEEeeeChhH-
Q 022338 26 RVKLRYCDGASFSGDSQ---NE-------GAQLYFRGQRIWLTAMQDL-----------MAKGMQNADQALLSGCSAGG- 83 (298)
Q Consensus 26 ~V~vpYC~Gd~~~G~~~---~~-------~~~l~frG~~i~~avl~~l-----------~~~~~~~a~~vilsG~SAGG- 83 (298)
.+|+||=+ |.+. ++ +.++.+.=..+++||++-+ .+.|. ..++|+++| ||
T Consensus 379 l~f~P~l~-----Ger~P~~~~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~e~l~~~g~-~~~~i~~~G---Gg~ 449 (548)
T PRK04123 379 LVALDWFN-----GRRTPLADQRLKGVITGLTLGTDAPDIYRALIEATAFGTRAIMECFEDQGV-PVEEVIAAG---GIA 449 (548)
T ss_pred eEEccccc-----CCCCCCCCCCCceEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcceEEEeC---CCc
Confidence 58999844 4443 11 3344454456777775432 22233 467888887 55
Q ss_pred HHHHHhHHHHHhhCCCCc
Q 022338 84 LASILHCDEFRDLFPKTT 101 (298)
Q Consensus 84 ~g~~~~~d~~~~~lp~~~ 101 (298)
--.-++.+-+++.+...+
T Consensus 450 s~s~~w~Qi~ADv~g~pV 467 (548)
T PRK04123 450 RKNPVLMQIYADVLNRPI 467 (548)
T ss_pred ccCHHHHHHHHHhcCCce
Confidence 456788888888887544
No 181
>PRK13690 hypothetical protein; Provisional
Probab=26.73 E-value=86 Score=27.98 Aligned_cols=28 Identities=18% Similarity=0.385 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeCh
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSA 81 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SA 81 (298)
.-++.++++|+++.--++.++++.|||-
T Consensus 8 ~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 8 KQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 4577889999986555677899999984
No 182
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=26.69 E-value=97 Score=29.79 Aligned_cols=65 Identities=26% Similarity=0.285 Sum_probs=45.0
Q ss_pred EEeHHHHHHHHHHHHHHh------CCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCCC
Q 022338 49 YFRGQRIWLTAMQDLMAK------GMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVDV 118 (298)
Q Consensus 49 ~frG~~i~~avl~~l~~~------~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~~ 118 (298)
++.=..-++.+.++|++. -.+.|+.=+|+|.|-||+.+++-.= ..|. .==.+++=||.|-+.+.-
T Consensus 148 ~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl----~~Pe-~FG~V~s~Sps~~~~~~~ 218 (299)
T COG2382 148 LHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGL----RHPE-RFGHVLSQSGSFWWTPLD 218 (299)
T ss_pred hcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHh----cCch-hhceeeccCCccccCccc
Confidence 345566788888998873 2346788899999999998876442 3343 224567788888776553
No 183
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=25.44 E-value=78 Score=27.96 Aligned_cols=27 Identities=19% Similarity=0.341 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeCh
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSA 81 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SA 81 (298)
-++.++++|+++..-++.++++.|||-
T Consensus 2 ~~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T TIGR01440 2 QLTTVLEELKDASNLKKGDLFVIGCST 28 (172)
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 367889999986555677899999984
No 184
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=24.84 E-value=92 Score=28.37 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHH
Q 022338 53 QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 53 ~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d 91 (298)
..-..++|+||..+-.. ..+|-+.|.|.+|..+++-+.
T Consensus 83 ~~D~~d~I~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~ 120 (272)
T PF02129_consen 83 AQDGYDTIEWIAAQPWS-NGKVGMYGISYGGFTQWAAAA 120 (272)
T ss_dssp HHHHHHHHHHHHHCTTE-EEEEEEEEETHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCC-CCeEEeeccCHHHHHHHHHHh
Confidence 44567789999985333 358999999999987766443
No 185
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=24.39 E-value=1.3e+02 Score=28.18 Aligned_cols=49 Identities=20% Similarity=0.270 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcc
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGM 111 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~ 111 (298)
-..+.+.+|.+ -+.+++.++||.++++.+. +++.++...-|.+++|+|.
T Consensus 234 e~~~a~~~l~~-----~~gi~~g~ssga~laa~~~---~~~~~~~~~vv~v~~d~g~ 282 (290)
T TIGR01138 234 DAENTMRELAV-----REGIFCGVSSGGAVAAALR---LARELPDAVVVAIICDRGD 282 (290)
T ss_pred HHHHHHHHHHH-----HhCceEcHhHHHHHHHHHH---HHHHCCCCeEEEEECCCCc
Confidence 33444555554 3456777788888887775 3334665556888899993
No 186
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=24.22 E-value=2.2e+02 Score=29.02 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=26.3
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccccc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLD 114 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld 114 (298)
.++++|.|.|.||+=++..+. ..|..++-.++.+++.+..
T Consensus 273 ~~k~~LVGhSmGG~iAl~~A~----~~Pe~V~~LVLi~~~~~~~ 312 (481)
T PLN03087 273 VKSFHIVAHSLGCILALALAV----KHPGAVKSLTLLAPPYYPV 312 (481)
T ss_pred CCCEEEEEECHHHHHHHHHHH----hChHhccEEEEECCCcccc
Confidence 467999999999987765443 4565444445556655543
No 187
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=24.18 E-value=62 Score=27.49 Aligned_cols=51 Identities=8% Similarity=-0.006 Sum_probs=31.4
Q ss_pred CCCCCcccccCCCCC--CeeEEeHHHHHHHHHHHHHHhCCCCcCeeEEeeeChh
Q 022338 31 YCDGASFSGDSQNEG--AQLYFRGQRIWLTAMQDLMAKGMQNADQALLSGCSAG 82 (298)
Q Consensus 31 YC~Gd~~~G~~~~~~--~~l~frG~~i~~avl~~l~~~~~~~a~~vilsG~SAG 82 (298)
|+-+|.|.|....-. ..-+-+-....+++++.+.+ .+++++.|+++|--..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~d~vi~~GDl~~ 54 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNE-TVGPDDTVYHLGDFSF 54 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhh-hcCCCCEEEEeCCCCC
Confidence 677899999754100 01111112344667777766 5788999999997543
No 188
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=24.05 E-value=2.9e+02 Score=22.02 Aligned_cols=55 Identities=20% Similarity=0.302 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHH-hCCCCcCeeEEeee--C------hhHH-HHHHhHHHHHhhCCCCceEEEeecCc
Q 022338 54 RIWLTAMQDLMA-KGMQNADQALLSGC--S------AGGL-ASILHCDEFRDLFPKTTKVKCLSDAG 110 (298)
Q Consensus 54 ~i~~avl~~l~~-~~~~~a~~vilsG~--S------AGG~-g~~~~~d~~~~~lp~~~~v~~l~DsG 110 (298)
-|+-..+.+.+. .|++.-. ++|.-. + .|+- -=.-....+.+.+|+ .++.+|.|||
T Consensus 10 wnly~~l~~Fl~~~~~P~G~-~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~-~kfiLIGDsg 74 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGP-LLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPE-RKFILIGDSG 74 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCc-eEcccCCccccccccCCchhHHHHHHHHHHHHCCC-CcEEEEeeCC
Confidence 355556666665 4787655 555433 1 2222 233455677788996 7899999999
No 189
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=23.74 E-value=1.9e+02 Score=22.49 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=24.4
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCc
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAG 110 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG 110 (298)
-++|+|.|. |..|+ -.++.++..+++|.+++..-
T Consensus 7 ~~~vlVvGg--G~va~----~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 7 GKRVLVVGG--GPVAA----RKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp T-EEEEEEE--SHHHH----HHHHHHCCCTBEEEEEESSE
T ss_pred CCEEEEECC--CHHHH----HHHHHHHhCCCEEEEECCch
Confidence 456777776 44333 67888899899999998664
No 190
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=23.69 E-value=1.7e+02 Score=28.75 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=24.5
Q ss_pred CcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCCC
Q 022338 70 NADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAVD 117 (298)
Q Consensus 70 ~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~~ 117 (298)
....+|+.|+|.|| .-+-++|..+|. .-.-.++-|+...-..+
T Consensus 111 ~~~pwI~~GgSY~G----~Laaw~r~kyP~-~~~ga~ASSapv~a~~d 153 (434)
T PF05577_consen 111 PNSPWIVFGGSYGG----ALAAWFRLKYPH-LFDGAWASSAPVQAKVD 153 (434)
T ss_dssp CC--EEEEEETHHH----HHHHHHHHH-TT-T-SEEEEET--CCHCCT
T ss_pred CCCCEEEECCcchh----HHHHHHHhhCCC-eeEEEEeccceeeeecc
Confidence 33468888888877 456678899996 33455666665544333
No 191
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=23.66 E-value=3.6e+02 Score=22.10 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=25.9
Q ss_pred cCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecC
Q 022338 71 ADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDA 109 (298)
Q Consensus 71 a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~Ds 109 (298)
...++|.|.|.||.-++..+-.+.+.- ..+.-.++.|+
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~-~~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARG-IPPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCC-CCCcEEEEEcc
Confidence 456899999999999987777776542 22333355555
No 192
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=23.55 E-value=1.4e+02 Score=29.63 Aligned_cols=44 Identities=20% Similarity=0.300 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH----HHHHhhCCC
Q 022338 54 RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC----DEFRDLFPK 99 (298)
Q Consensus 54 ~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~----d~~~~~lp~ 99 (298)
+.+++- +.|++ .|+-.+-..|.|.|.||.=|+-|. |.+++.++=
T Consensus 131 D~V~aq-~~ll~-~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~i 178 (368)
T COG2021 131 DMVRAQ-RLLLD-ALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPI 178 (368)
T ss_pred HHHHHH-HHHHH-hcCcceEeeeeccChHHHHHHHHHHhChHHHhhhhee
Confidence 334433 44555 566666677999999999877665 667776663
No 193
>PF13173 AAA_14: AAA domain
Probab=23.46 E-value=92 Score=25.00 Aligned_cols=28 Identities=29% Similarity=0.436 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhCCCCcCeeEEeeeChhHH
Q 022338 55 IWLTAMQDLMAKGMQNADQALLSGCSAGGL 84 (298)
Q Consensus 55 i~~avl~~l~~~~~~~a~~vilsG~SAGG~ 84 (298)
.|...++.|..++ ..-++++||+|++.+
T Consensus 75 ~~~~~lk~l~d~~--~~~~ii~tgS~~~~l 102 (128)
T PF13173_consen 75 DWEDALKFLVDNG--PNIKIILTGSSSSLL 102 (128)
T ss_pred cHHHHHHHHHHhc--cCceEEEEccchHHH
Confidence 5666777777643 335899999999987
No 194
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=23.34 E-value=1.2e+02 Score=30.41 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=26.0
Q ss_pred CCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeec-Ccccc
Q 022338 68 MQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSD-AGMFL 113 (298)
Q Consensus 68 ~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~D-sG~fl 113 (298)
++..-.+|+.|+|-||+=+.| .++.-|. .+.++-| ||+-+
T Consensus 180 ~~~~lp~I~~G~s~G~yla~l----~~k~aP~--~~~~~iDns~~~~ 220 (403)
T PF11144_consen 180 NGGGLPKIYIGSSHGGYLAHL----CAKIAPW--LFDGVIDNSSYAL 220 (403)
T ss_pred ccCCCcEEEEecCcHHHHHHH----HHhhCcc--ceeEEEecCcccc
Confidence 333348999999999976554 3344454 4667766 66654
No 195
>PRK05855 short chain dehydrogenase; Validated
Probab=23.17 E-value=1.2e+02 Score=30.16 Aligned_cols=17 Identities=18% Similarity=0.298 Sum_probs=14.4
Q ss_pred hccCcchhhhhhhhhHH
Q 022338 162 ANIKTPMFLLNAAYDAW 178 (298)
Q Consensus 162 ~~i~tP~Fil~s~YD~w 178 (298)
.+++.|++||+...|..
T Consensus 230 ~~~~~P~lii~G~~D~~ 246 (582)
T PRK05855 230 RYTDVPVQLIVPTGDPY 246 (582)
T ss_pred CCccCceEEEEeCCCcc
Confidence 35899999999999874
No 196
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.01 E-value=1.3e+02 Score=29.03 Aligned_cols=40 Identities=20% Similarity=0.357 Sum_probs=25.8
Q ss_pred CCCCeeEEeHH--HHHHHHHHHHHHhCCC--CcCeeEEeeeChhHHH
Q 022338 43 NEGAQLYFRGQ--RIWLTAMQDLMAKGMQ--NADQALLSGCSAGGLA 85 (298)
Q Consensus 43 ~~~~~l~frG~--~i~~avl~~l~~~~~~--~a~~vilsG~SAGG~g 85 (298)
+...++|+||- +.++|| +-|+ +|+ +.++|-++|.|-||-=
T Consensus 146 D~kd~yyyr~v~~D~~~av-e~~~--sl~~vde~Ri~v~G~SqGGgl 189 (321)
T COG3458 146 DRKDTYYYRGVFLDAVRAV-EILA--SLDEVDEERIGVTGGSQGGGL 189 (321)
T ss_pred cCCCceEEeeehHHHHHHH-HHHh--ccCccchhheEEeccccCchh
Confidence 33578888882 333332 2232 455 5789999999999843
No 197
>PTZ00387 epsilon tubulin; Provisional
Probab=22.86 E-value=1.4e+02 Score=30.30 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=36.7
Q ss_pred CeeEEeHHHHHHHHHHHHHHhCCCCcCee---EEeeeChhHHH---HHHhHHHHHhhCCCC
Q 022338 46 AQLYFRGQRIWLTAMQDLMAKGMQNADQA---LLSGCSAGGLA---SILHCDEFRDLFPKT 100 (298)
Q Consensus 46 ~~l~frG~~i~~avl~~l~~~~~~~a~~v---ilsG~SAGG~g---~~~~~d~~~~~lp~~ 100 (298)
...|--|....+++++.+.. -+.+.+.+ +|+-+-+||.| +-+-.+.+++.+|+.
T Consensus 104 ~G~~~~g~~~~d~~~d~Ir~-~~E~cD~l~gf~i~~slgGGTGSGlgs~lle~l~d~y~~~ 163 (465)
T PTZ00387 104 VGHMEYGDKYIDSISESVRR-QVEQCDSLQSFFLMHSLGGGTGSGLGTRILGMLEDEFPHV 163 (465)
T ss_pred CCcccccHHHHHHHHHHHHH-HHHhccCcceEEEEeecCCCcchhHHHHHHHHHHHhcccC
Confidence 44555578888888888776 34555554 66666666665 344568899999964
No 198
>smart00704 ZnF_CDGSH CDGSH-type zinc finger. Function unknown.
Probab=22.58 E-value=34 Score=22.61 Aligned_cols=6 Identities=67% Similarity=1.708 Sum_probs=5.4
Q ss_pred eCCCCC
Q 022338 30 RYCDGA 35 (298)
Q Consensus 30 pYC~Gd 35 (298)
|||||.
T Consensus 26 PfCDGs 31 (38)
T smart00704 26 PYCDGS 31 (38)
T ss_pred CccCCc
Confidence 999995
No 199
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=22.53 E-value=55 Score=32.72 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=13.2
Q ss_pred EEeeeChhHHHHHHhH
Q 022338 75 LLSGCSAGGLASILHC 90 (298)
Q Consensus 75 ilsG~SAGG~g~~~~~ 90 (298)
-++|+|||++.+.+++
T Consensus 44 ~iaGaSAGAL~aa~~a 59 (405)
T cd07223 44 RIYGSSSGALNAVSIV 59 (405)
T ss_pred eeeeeCHHHHHHHHHH
Confidence 4899999999887654
No 200
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=22.50 E-value=73 Score=34.08 Aligned_cols=29 Identities=31% Similarity=0.507 Sum_probs=24.9
Q ss_pred HHHHHHh-CCCCcCeeEEeeeChhHHHHHH
Q 022338 60 MQDLMAK-GMQNADQALLSGCSAGGLASIL 88 (298)
Q Consensus 60 l~~l~~~-~~~~a~~vilsG~SAGG~g~~~ 88 (298)
+++|.++ ||-+.++|.+-|.|.||+=++.
T Consensus 714 lq~Laeq~gfidmdrV~vhGWSYGGYLSlm 743 (867)
T KOG2281|consen 714 LQMLAEQTGFIDMDRVGVHGWSYGGYLSLM 743 (867)
T ss_pred HHHHHHhcCcccchheeEeccccccHHHHH
Confidence 7788875 7999999999999999986554
No 201
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=22.34 E-value=1.6e+02 Score=27.66 Aligned_cols=60 Identities=15% Similarity=0.193 Sum_probs=35.3
Q ss_pred eHHHHHHHHHHHHHHh--CCCCcCeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCcccccCC
Q 022338 51 RGQRIWLTAMQDLMAK--GMQNADQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMFLDAV 116 (298)
Q Consensus 51 rG~~i~~avl~~l~~~--~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~fld~~ 116 (298)
+...-+...++.+++. .-..-..++|.|+|+||+=++.+...-. .+|..+.=|+.++...
T Consensus 84 ~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~------~~i~~~vLssP~~~l~ 145 (298)
T COG2267 84 DSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYP------PRIDGLVLSSPALGLG 145 (298)
T ss_pred hhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCC------ccccEEEEECccccCC
Confidence 3344444555555542 1134578999999999987776665444 2344444455565544
No 202
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=22.07 E-value=82 Score=27.48 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=35.9
Q ss_pred CeeEEeH-HHHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhHHHHHhhCC
Q 022338 46 AQLYFRG-QRIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHCDEFRDLFP 98 (298)
Q Consensus 46 ~~l~frG-~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~d~~~~~lp 98 (298)
+..|+.| .-.++..||||-.. --.-+.|++.|.|-|+.|++.....+|..+.
T Consensus 75 tPeYn~s~pg~lKnaiD~l~~~-~~~~Kpv~~~~~s~g~~~~~~a~~~Lr~vl~ 127 (184)
T COG0431 75 TPEYNGSYPGALKNAIDWLSRE-ALGGKPVLLLGTSGGGAGGLRAQNQLRPVLS 127 (184)
T ss_pred CCccCCCCCHHHHHHHHhCCHh-HhCCCcEEEEecCCCchhHHHHHHHHHHHHH
Confidence 4445444 24789999998763 2245667788888888888877777777654
No 203
>COG0627 Predicted esterase [General function prediction only]
Probab=21.67 E-value=74 Score=30.63 Aligned_cols=51 Identities=22% Similarity=0.274 Sum_probs=31.0
Q ss_pred HHHHHHHH---HhCCCCc---CeeEEeeeChhHHHHHHhHHHHHhhCCCCceEEEeecCccc
Q 022338 57 LTAMQDLM---AKGMQNA---DQALLSGCSAGGLASILHCDEFRDLFPKTTKVKCLSDAGMF 112 (298)
Q Consensus 57 ~avl~~l~---~~~~~~a---~~vilsG~SAGG~g~~~~~d~~~~~lp~~~~v~~l~DsG~f 112 (298)
..++.+|- .+.++.. ++--++|.|.||.||+..+-+--+++ ..+.+.||+.
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f-----~~~sS~Sg~~ 187 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRF-----KSASSFSGIL 187 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchh-----ceeccccccc
Confidence 33444444 2355533 27889999999999998443333333 3445667754
No 204
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=21.59 E-value=1.6e+02 Score=28.01 Aligned_cols=17 Identities=35% Similarity=0.616 Sum_probs=13.9
Q ss_pred CeeEEeeeChhHHHHHH
Q 022338 72 DQALLSGCSAGGLASIL 88 (298)
Q Consensus 72 ~~vilsG~SAGG~g~~~ 88 (298)
++++|.|+|.||+-++.
T Consensus 155 ~~~~lvGhS~Gg~ia~~ 171 (360)
T PLN02679 155 KPTVLIGNSVGSLACVI 171 (360)
T ss_pred CCeEEEEECHHHHHHHH
Confidence 57999999999976543
No 205
>PF08121 Toxin_33: Waglerin family; InterPro: IPR012637 This family consists of the lethal peptides (waglerins) that are found in the venom of Trimeresurus wagleri (Wagler's pit viper) (Tropidolaemus wagleri). Waglerins are 22-24 residue lethal peptides and are competitive antagonist of the muscle nicotinic receptor (nAChR). Waglerin-1 possesses a distinctive selectivity for the alpha-epsilon interface binding site of the mouse nAChR [].; GO: 0030550 acetylcholine receptor inhibitor activity, 0005576 extracellular region
Probab=21.52 E-value=49 Score=18.96 Aligned_cols=11 Identities=27% Similarity=0.778 Sum_probs=8.2
Q ss_pred CCCCCCCCCCC
Q 022338 286 YPCDKTCRNLV 296 (298)
Q Consensus 286 yPcNptC~~~~ 296 (298)
-||-|.|+.+.
T Consensus 7 rpcyppchyip 17 (22)
T PF08121_consen 7 RPCYPPCHYIP 17 (22)
T ss_pred ccCCCCccccC
Confidence 37889998763
No 206
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=21.16 E-value=26 Score=32.35 Aligned_cols=21 Identities=14% Similarity=0.512 Sum_probs=17.9
Q ss_pred hhHhhccCcchhhhhhhhhHH
Q 022338 158 QNLVANIKTPMFLLNAAYDAW 178 (298)
Q Consensus 158 ~~~~~~i~tP~Fil~s~YD~w 178 (298)
-.++|.|+-|+||++..-|..
T Consensus 209 r~~lp~vkcPtli~hG~kDp~ 229 (277)
T KOG2984|consen 209 RLVLPQVKCPTLIMHGGKDPF 229 (277)
T ss_pred hhhcccccCCeeEeeCCcCCC
Confidence 467999999999999888763
No 207
>cd06377 PBP1_iGluR_NMDA_NR3 N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR3 subunit of NMDA receptor family. N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the NR3 subunit of NMDA receptor family. The ionotropic N-methyl-d-asparate (NMDA) subtype of glutamate receptor serves critical functions in neuronal development, functioning, and degeneration in the mammalian central nervous system. The functional NMDA receptor is a heterotetramer composed of two NR1 and two NR2 (A, B, C, and D) or of NR3 (A and B) subunits. The receptor controls a cation channel that is highly permeable to monovalent ions and calcium and exhibits voltage-dependent inhibition by magnesium. Dual agonists, glutamate and glycine, are required for efficient activation of the NMDA receptor. Among NMDA receptor subtypes, the NR2B subunit containing receptors appear particularly important for pain perception; thus NR2B-selective antagonists may be useful in
Probab=21.14 E-value=1.7e+02 Score=28.96 Aligned_cols=78 Identities=21% Similarity=0.269 Sum_probs=46.7
Q ss_pred CccccEEEEeCCCCCcccccCC--------CCCCeeEEe--------HHHHHHHHHHHHHHhCCCCcCeeEEeeeChhHH
Q 022338 21 FFNWNRVKLRYCDGASFSGDSQ--------NEGAQLYFR--------GQRIWLTAMQDLMAKGMQNADQALLSGCSAGGL 84 (298)
Q Consensus 21 f~~wn~V~vpYC~Gd~~~G~~~--------~~~~~l~fr--------G~~i~~avl~~l~~~~~~~a~~vilsG~SAGG~ 84 (298)
+++|+++.+=||+..-+..-.+ .-...+.+| +...++.+|++|.. +.+++++|-+||.=..
T Consensus 148 ~~~W~~f~~iy~~~~gl~~lq~l~~~~~~~~~~~~i~v~~~~~~~~d~~~~~~~~L~~i~~---~~~~~~ill~cs~e~~ 224 (382)
T cd06377 148 RNGWEDVSLVLCRERDPTGLLLLWTNHARFHLGSVLNLSRNDPSTADLLDFLRAQLELLKD---PPGPAVVLFGCDVARA 224 (382)
T ss_pred HCCCcEEEEEEecCcCHHHHHHHHHHhcccccCceEEEEeccCccCChhHHHHHHHHHhhc---ccCceEEEEECCHHHH
Confidence 5699999999999986654221 112445552 34555888888754 3436788888875543
Q ss_pred HHHHhHHHHHhhCCCCceEEEeec
Q 022338 85 ASILHCDEFRDLFPKTTKVKCLSD 108 (298)
Q Consensus 85 g~~~~~d~~~~~lp~~~~v~~l~D 108 (298)
..++ ++..+ .-..++.+
T Consensus 225 ~~il------~~~~~-~y~wIv~~ 241 (382)
T cd06377 225 RRVL------ELTPP-GPHWILGD 241 (382)
T ss_pred HHHH------Hhhcc-ceEEEEcC
Confidence 3333 33332 24566655
No 208
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=20.97 E-value=3.7e+02 Score=26.00 Aligned_cols=77 Identities=22% Similarity=0.354 Sum_probs=44.3
Q ss_pred EEEeCCCCCcccccCCCC------------CCeeEEeHHHHHHHH---HHHHHHhCCC--CcCeeEEeeeChhHHHHHHh
Q 022338 27 VKLRYCDGASFSGDSQNE------------GAQLYFRGQRIWLTA---MQDLMAKGMQ--NADQALLSGCSAGGLASILH 89 (298)
Q Consensus 27 V~vpYC~Gd~~~G~~~~~------------~~~l~frG~~i~~av---l~~l~~~~~~--~a~~vilsG~SAGG~g~~~~ 89 (298)
.||==|||-+|.|+..-+ +..+.|.=-.-.++. ++.+...|+. +.++++ +||..++
T Consensus 24 tfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~---ssa~~~a---- 96 (306)
T KOG2882|consen 24 TFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIF---SSAYAIA---- 96 (306)
T ss_pred EEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCccccc---ChHHHHH----
Confidence 467779999999987632 344444433222222 2333333555 233343 5565554
Q ss_pred HHHHHhhCCCCceEEEeecCcc
Q 022338 90 CDEFRDLFPKTTKVKCLSDAGM 111 (298)
Q Consensus 90 ~d~~~~~lp~~~~v~~l~DsG~ 111 (298)
+|+++..|...+|.++.-.|+
T Consensus 97 -~ylk~~~~~~k~Vyvig~~gi 117 (306)
T KOG2882|consen 97 -DYLKKRKPFGKKVYVIGEEGI 117 (306)
T ss_pred -HHHHHhCcCCCeEEEecchhh
Confidence 556666666678888887664
No 209
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=20.47 E-value=1.2e+02 Score=29.15 Aligned_cols=37 Identities=24% Similarity=0.263 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCC---------CCcCeeEEeeeChhHHHHHHhHH
Q 022338 54 RIWLTAMQDLMAKGM---------QNADQALLSGCSAGGLASILHCD 91 (298)
Q Consensus 54 ~i~~avl~~l~~~~~---------~~a~~vilsG~SAGG~g~~~~~d 91 (298)
.-..+|++||.+ || ++-+++.|+|+|-||-.|+.-+=
T Consensus 94 ~~aa~V~~WL~~-gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlAL 139 (307)
T PF07224_consen 94 KSAASVINWLPE-GLQHVLPENVEANLSKLALSGHSRGGKTAFALAL 139 (307)
T ss_pred HHHHHHHHHHHh-hhhhhCCCCcccccceEEEeecCCccHHHHHHHh
Confidence 346678888876 43 35788999999999987765443
No 210
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=20.08 E-value=65 Score=29.32 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=28.2
Q ss_pred CCCCCcccccCCCCCC-eeEEeHH------HHHHHHHHHHHHhCCCCcCeeEEeeeChhHHHHHHhH
Q 022338 31 YCDGASFSGDSQNEGA-QLYFRGQ------RIWLTAMQDLMAKGMQNADQALLSGCSAGGLASILHC 90 (298)
Q Consensus 31 YC~Gd~~~G~~~~~~~-~l~frG~------~i~~avl~~l~~~~~~~a~~vilsG~SAGG~g~~~~~ 90 (298)
||++.+|+-+--.... ....... +-+++.++..++. -.| +|=|.|+|.||.=+-...
T Consensus 30 Y~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~--TGa-kVDIVgHS~G~~iaR~yi 93 (219)
T PF01674_consen 30 YCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY--TGA-KVDIVGHSMGGTIARYYI 93 (219)
T ss_dssp --CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH--HT---EEEEEETCHHHHHHHHH
T ss_pred CCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh--hCC-EEEEEEcCCcCHHHHHHH
Confidence 8888888765432111 1111111 2355556666542 357 999999999986544443
Done!