Query 022342
Match_columns 298
No_of_seqs 256 out of 1932
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 03:56:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dmp_A Uracil phosphoribosyltr 100.0 5.7E-65 1.9E-69 453.6 21.5 207 89-298 7-217 (217)
2 1bd3_D Uprtase, uracil phospho 100.0 5E-63 1.7E-67 447.7 23.5 214 84-297 26-243 (243)
3 1xtt_A Probable uracil phospho 100.0 8.1E-62 2.8E-66 433.2 22.5 200 92-295 2-216 (216)
4 2ehj_A Uracil phosphoribosyltr 100.0 5.4E-61 1.8E-65 425.8 22.3 203 91-297 1-208 (208)
5 1v9s_A Uracil phosphoribosyltr 100.0 6.3E-61 2.2E-65 425.3 22.6 202 92-297 2-208 (208)
6 1o5o_A Uracil phosphoribosyltr 100.0 3.9E-60 1.3E-64 423.5 24.4 206 88-297 11-221 (221)
7 2e55_A Uracil phosphoribosyltr 100.0 5.4E-58 1.9E-62 406.5 24.7 201 93-298 2-207 (208)
8 1i5e_A Uracil phosphoribosyltr 100.0 2.2E-55 7.7E-60 390.5 22.8 204 90-297 1-209 (209)
9 3asz_A Uridine kinase; cytidin 99.2 3.6E-11 1.2E-15 104.1 7.7 84 1-84 125-208 (211)
10 1wd5_A Hypothetical protein TT 99.1 1.7E-09 5.8E-14 94.8 13.2 71 203-278 113-183 (208)
11 2jeo_A Uridine-cytidine kinase 99.0 3.7E-10 1.2E-14 100.7 8.4 82 1-83 154-235 (245)
12 3ohp_A Hypoxanthine phosphorib 99.0 3.3E-09 1.1E-13 91.1 13.1 132 115-274 10-149 (177)
13 2ywu_A Hypoxanthine-guanine ph 99.0 3.7E-09 1.3E-13 91.1 12.5 133 113-274 13-153 (181)
14 1z7g_A HGPRT, HGPRTASE, hypoxa 99.0 2.3E-09 8E-14 94.8 10.0 136 111-275 33-185 (217)
15 3o7m_A Hypoxanthine phosphorib 98.9 3.6E-09 1.2E-13 91.6 9.9 130 115-273 14-151 (186)
16 3hvu_A Hypoxanthine phosphorib 98.9 7.4E-09 2.5E-13 91.0 11.6 132 114-274 35-174 (204)
17 2geb_A Hypoxanthine-guanine ph 98.9 9.1E-09 3.1E-13 88.6 10.9 132 114-274 17-156 (185)
18 1a7j_A Phosphoribulokinase; tr 98.9 7.9E-10 2.7E-14 101.8 4.4 62 1-63 148-215 (290)
19 1dku_A Protein (phosphoribosyl 98.9 2.8E-09 9.6E-14 99.6 7.0 110 160-274 167-281 (317)
20 3tqc_A Pantothenate kinase; bi 98.8 1.3E-09 4.4E-14 102.1 4.4 68 1-68 227-313 (321)
21 3ozf_A Hypoxanthine-guanine-xa 98.8 9.9E-09 3.4E-13 92.8 9.5 132 114-274 64-214 (250)
22 2jbh_A Phosphoribosyltransfera 98.8 3.6E-09 1.2E-13 94.1 5.2 133 113-274 43-192 (225)
23 1yfz_A Hypoxanthine-guanine ph 98.8 2.9E-08 9.8E-13 86.8 10.2 133 114-275 37-177 (205)
24 1sq5_A Pantothenate kinase; P- 98.8 3.9E-09 1.3E-13 97.6 4.7 67 1-67 215-300 (308)
25 1tc1_A Protein (hypoxanthine p 98.7 3.4E-08 1.1E-12 87.6 9.6 139 114-275 12-162 (220)
26 1hgx_A HGXPRTASE, hypoxanthine 98.7 2.8E-08 9.6E-13 85.2 8.5 134 114-275 15-155 (183)
27 1u9y_A RPPK;, ribose-phosphate 98.7 3.1E-08 1E-12 91.1 9.2 95 161-261 156-256 (284)
28 1uj2_A Uridine-cytidine kinase 98.7 1.8E-08 6.2E-13 90.0 7.1 83 1-83 151-233 (252)
29 3aez_A Pantothenate kinase; tr 98.7 1.5E-08 5.3E-13 94.2 6.6 68 1-68 218-304 (312)
30 1vdm_A Purine phosphoribosyltr 98.7 7.9E-08 2.7E-12 79.7 9.9 90 163-254 29-125 (153)
31 1pzm_A HGPRT, hypoxanthine-gua 98.7 4E-08 1.4E-12 86.5 8.3 139 114-275 28-177 (211)
32 3s5j_B Ribose-phosphate pyroph 98.7 3.9E-08 1.3E-12 92.1 7.9 70 204-275 207-278 (326)
33 2aee_A OPRT, oprtase, orotate 98.6 6.9E-09 2.3E-13 91.2 2.1 76 207-284 114-193 (211)
34 1fsg_A HGPRTASE, hypoxanthine- 98.6 2.7E-08 9.3E-13 88.9 6.0 132 114-274 50-200 (233)
35 3dah_A Ribose-phosphate pyroph 98.6 6.4E-08 2.2E-12 90.4 8.5 110 160-274 166-280 (319)
36 1w30_A PYRR bifunctional prote 98.6 1.4E-07 4.8E-12 82.3 10.2 142 114-278 17-174 (201)
37 1a3c_A PYRR, pyrimidine operon 98.6 1.2E-07 4E-12 80.9 8.6 70 201-278 89-160 (181)
38 3c8u_A Fructokinase; YP_612366 98.6 4.2E-08 1.5E-12 85.0 5.3 60 1-62 148-207 (208)
39 1ufr_A TT1027, PYR mRNA-bindin 98.5 2.4E-07 8.3E-12 79.1 9.1 70 202-278 88-158 (181)
40 2ji4_A Phosphoribosyl pyrophos 98.5 1.2E-07 4.1E-12 90.6 6.5 69 204-274 266-336 (379)
41 3lrt_A Ribose-phosphate pyroph 98.3 1.1E-06 3.8E-11 80.8 8.4 69 204-275 197-267 (286)
42 3acd_A Hypoxanthine-guanine ph 98.3 2.1E-06 7.2E-11 73.9 8.4 113 115-252 15-135 (181)
43 1odf_A YGR205W, hypothetical 3 98.3 2.5E-07 8.4E-12 85.2 2.7 63 2-65 204-278 (290)
44 2xbu_A Hypoxanthine-guanine ph 98.2 7.1E-06 2.4E-10 72.6 10.4 49 204-252 97-160 (221)
45 2ga8_A Hypothetical 39.9 kDa p 98.1 5.3E-07 1.8E-11 85.4 1.6 58 3-62 291-350 (359)
46 1y0b_A Xanthine phosphoribosyl 98.1 5E-06 1.7E-10 71.7 6.6 52 208-261 118-171 (197)
47 2dy0_A APRT, adenine phosphori 98.1 5.7E-06 1.9E-10 71.2 6.8 60 207-270 123-184 (190)
48 1zn8_A APRT, adenine phosphori 98.0 6.5E-06 2.2E-10 70.0 5.9 51 207-259 117-169 (180)
49 1qb7_A APRT, adenine phosphori 98.0 1.4E-05 4.7E-10 71.4 8.0 68 208-277 136-209 (236)
50 2yzk_A OPRT, oprtase, orotate 98.0 1.3E-05 4.5E-10 68.2 7.2 61 206-270 102-163 (178)
51 1g2q_A Adenine phosphoribosylt 97.9 2.9E-05 9.8E-10 66.5 8.8 51 206-258 118-170 (187)
52 1l1q_A Adenine phosphoribosylt 97.9 1.5E-05 5.2E-10 68.3 7.0 50 208-259 115-168 (186)
53 3dez_A OPRT, oprtase, orotate 97.9 2.5E-05 8.6E-10 70.2 7.9 53 207-261 146-200 (243)
54 2wns_A Orotate phosphoribosylt 97.9 1.7E-05 5.8E-10 69.2 6.5 60 208-271 109-169 (205)
55 3m3h_A OPRT, oprtase, orotate 97.9 2.9E-05 9.8E-10 69.4 7.8 60 207-270 134-195 (234)
56 2p1z_A Phosphoribosyltransfera 97.9 2.2E-05 7.5E-10 67.0 6.4 59 208-270 112-171 (180)
57 1vch_A Phosphoribosyltransfera 97.8 9.1E-06 3.1E-10 68.6 3.9 45 208-254 118-162 (175)
58 1q3t_A Cytidylate kinase; nucl 97.8 2.7E-05 9.3E-10 68.4 6.4 63 1-64 153-218 (236)
59 1dqn_A Guanine phosphoribosylt 97.7 9.7E-06 3.3E-10 72.3 1.5 104 161-271 62-173 (230)
60 2ps1_A Orotate phosphoribosylt 97.6 4.9E-05 1.7E-09 67.2 5.4 45 206-252 121-165 (226)
61 3mjd_A Orotate phosphoribosylt 97.6 6.4E-05 2.2E-09 67.0 5.2 44 207-252 133-176 (232)
62 3n2l_A OPRT, oprtase, orotate 97.5 0.00022 7.5E-09 63.8 8.1 60 207-270 140-206 (238)
63 1lh0_A OMP synthase; loop clos 97.5 8.6E-05 2.9E-09 65.1 5.2 43 207-252 115-157 (213)
64 1cke_A CK, MSSA, protein (cyti 97.5 0.00011 3.6E-09 63.5 5.4 62 1-63 141-205 (227)
65 4e22_A Cytidylate kinase; P-lo 97.4 0.00017 5.8E-09 64.2 5.8 80 2-81 164-246 (252)
66 1o57_A PUR operon repressor; p 97.4 8.2E-05 2.8E-09 68.4 3.5 45 208-254 194-238 (291)
67 2h92_A Cytidylate kinase; ross 97.4 0.00036 1.2E-08 59.9 7.1 76 1-80 136-214 (219)
68 1jjv_A Dephospho-COA kinase; P 97.3 0.0003 1E-08 59.9 6.1 71 1-81 124-194 (206)
69 3r20_A Cytidylate kinase; stru 97.3 0.00044 1.5E-08 61.5 7.3 77 2-81 147-225 (233)
70 1nul_A XPRT, xanthine-guanine 97.2 0.00025 8.6E-09 58.7 4.3 40 207-253 78-117 (152)
71 3lw7_A Adenylate kinase relate 97.2 0.00042 1.4E-08 56.3 5.5 73 2-78 103-175 (179)
72 1ecf_A Glutamine phosphoribosy 97.2 0.00025 8.6E-09 69.8 4.8 43 204-248 353-395 (504)
73 2f6r_A COA synthase, bifunctio 97.2 0.00058 2E-08 61.9 6.5 54 1-64 200-253 (281)
74 1ao0_A Glutamine phosphoribosy 97.1 0.00035 1.2E-08 68.0 4.9 40 206-247 334-373 (459)
75 4i1u_A Dephospho-COA kinase; s 96.9 0.0016 5.3E-08 57.1 6.8 53 1-63 132-184 (210)
76 2qt1_A Nicotinamide riboside k 96.9 0.0004 1.4E-08 59.3 2.7 72 1-81 130-203 (207)
77 3ake_A Cytidylate kinase; CMP 96.7 0.0024 8.2E-08 53.8 6.5 56 1-64 136-192 (208)
78 3qw4_B UMP synthase; N-termina 96.7 0.0014 4.7E-08 63.9 5.2 59 208-270 363-422 (453)
79 2jaq_A Deoxyguanosine kinase; 96.6 0.0031 1E-07 52.9 5.8 72 1-81 125-198 (205)
80 2vp4_A Deoxynucleoside kinase; 96.5 0.0016 5.6E-08 56.8 4.1 59 1-64 147-209 (230)
81 1vht_A Dephospho-COA kinase; s 96.3 0.0069 2.3E-07 51.9 6.8 70 1-80 126-195 (218)
82 2grj_A Dephospho-COA kinase; T 96.3 0.0049 1.7E-07 52.8 5.8 42 1-64 130-171 (192)
83 2if2_A Dephospho-COA kinase; a 96.3 0.0048 1.6E-07 52.2 5.6 67 1-82 124-190 (204)
84 1uf9_A TT1252 protein; P-loop, 96.1 0.0057 1.9E-07 51.3 5.1 66 1-80 125-190 (203)
85 2ocp_A DGK, deoxyguanosine kin 95.7 0.012 4.1E-07 51.4 5.4 76 1-81 150-238 (241)
86 2pt5_A Shikimate kinase, SK; a 95.5 0.0098 3.3E-07 48.4 3.8 71 1-86 93-166 (168)
87 2pbr_A DTMP kinase, thymidylat 95.0 0.042 1.5E-06 45.3 6.3 53 1-63 123-175 (195)
88 1ukz_A Uridylate kinase; trans 94.7 0.044 1.5E-06 46.0 5.7 46 2-48 122-173 (203)
89 1tev_A UMP-CMP kinase; ploop, 94.3 0.097 3.3E-06 43.0 7.0 72 2-81 115-192 (196)
90 3t61_A Gluconokinase; PSI-biol 94.3 0.094 3.2E-06 44.1 6.9 72 2-87 112-183 (202)
91 2plr_A DTMP kinase, probable t 94.3 0.15 5.1E-06 42.6 8.1 59 2-64 123-192 (213)
92 3a00_A Guanylate kinase, GMP k 94.3 0.031 1.1E-06 46.7 3.8 68 3-78 116-183 (186)
93 3kb2_A SPBC2 prophage-derived 94.2 0.061 2.1E-06 43.4 5.4 70 2-79 96-166 (173)
94 3fdi_A Uncharacterized protein 94.1 0.05 1.7E-06 46.6 4.7 73 2-78 118-197 (201)
95 2qor_A Guanylate kinase; phosp 94.1 0.12 3.9E-06 43.8 7.0 69 3-80 128-197 (204)
96 2z0h_A DTMP kinase, thymidylat 93.8 0.065 2.2E-06 44.4 4.8 67 2-81 123-189 (197)
97 3vaa_A Shikimate kinase, SK; s 93.7 0.25 8.7E-06 41.4 8.5 72 2-81 119-197 (199)
98 3d3q_A TRNA delta(2)-isopenten 93.6 0.027 9.1E-07 52.8 2.1 47 5-55 118-167 (340)
99 1zuh_A Shikimate kinase; alpha 93.5 0.071 2.4E-06 43.4 4.5 67 2-80 98-166 (168)
100 3hdt_A Putative kinase; struct 93.4 0.15 5.2E-06 44.5 6.7 72 3-78 139-217 (223)
101 1p5z_B DCK, deoxycytidine kina 93.3 0.14 5E-06 45.0 6.5 72 2-78 176-257 (263)
102 2bwj_A Adenylate kinase 5; pho 93.3 0.091 3.1E-06 43.5 4.9 73 1-78 116-195 (199)
103 1qf9_A UMP/CMP kinase, protein 93.2 0.17 5.8E-06 41.4 6.5 71 2-81 112-189 (194)
104 1kht_A Adenylate kinase; phosp 93.1 0.26 8.9E-06 40.3 7.4 26 2-29 116-141 (192)
105 2rhm_A Putative kinase; P-loop 92.9 0.079 2.7E-06 43.7 3.9 80 2-82 106-187 (193)
106 2iyv_A Shikimate kinase, SK; t 92.8 0.29 1E-05 40.1 7.3 72 2-83 95-168 (184)
107 2cdn_A Adenylate kinase; phosp 92.7 0.16 5.6E-06 42.5 5.7 68 2-81 128-199 (201)
108 1kgd_A CASK, peripheral plasma 92.7 0.11 3.9E-06 43.0 4.7 60 3-79 119-178 (180)
109 3ld9_A DTMP kinase, thymidylat 92.5 0.11 3.9E-06 45.4 4.5 72 2-82 147-218 (223)
110 1via_A Shikimate kinase; struc 92.4 0.2 7E-06 40.9 5.8 71 2-83 94-166 (175)
111 3trf_A Shikimate kinase, SK; a 92.3 0.26 8.9E-06 40.4 6.3 68 3-79 100-174 (185)
112 3lv8_A DTMP kinase, thymidylat 92.2 0.12 4.1E-06 45.6 4.4 76 2-82 156-231 (236)
113 1nks_A Adenylate kinase; therm 92.1 0.3 1E-05 39.9 6.5 72 2-80 117-192 (194)
114 3hjn_A DTMP kinase, thymidylat 92.0 0.22 7.4E-06 42.4 5.6 66 2-80 123-188 (197)
115 4tmk_A Protein (thymidylate ki 92.0 0.18 6.1E-06 43.7 5.1 75 2-81 134-208 (213)
116 2wwf_A Thymidilate kinase, put 91.9 0.28 9.6E-06 41.0 6.2 67 2-82 132-198 (212)
117 3nwj_A ATSK2; P loop, shikimat 91.8 0.27 9.3E-06 43.6 6.2 75 2-84 143-241 (250)
118 1zak_A Adenylate kinase; ATP:A 91.7 0.31 1.1E-05 41.5 6.2 21 2-22 110-130 (222)
119 4eun_A Thermoresistant glucoki 91.2 0.4 1.4E-05 40.2 6.4 66 3-82 127-192 (200)
120 4hlc_A DTMP kinase, thymidylat 91.1 0.57 1.9E-05 40.1 7.3 78 2-82 126-203 (205)
121 1nn5_A Similar to deoxythymidy 90.8 0.56 1.9E-05 39.1 7.0 72 2-81 131-202 (215)
122 1knq_A Gluconate kinase; ALFA/ 90.5 0.81 2.8E-05 37.1 7.5 65 3-81 106-171 (175)
123 4eaq_A DTMP kinase, thymidylat 90.4 0.64 2.2E-05 40.3 7.1 77 2-81 150-226 (229)
124 2c95_A Adenylate kinase 1; tra 90.1 0.28 9.6E-06 40.4 4.4 22 2-23 114-135 (196)
125 3tr0_A Guanylate kinase, GMP k 90.1 0.38 1.3E-05 39.9 5.3 66 3-78 120-185 (205)
126 1kag_A SKI, shikimate kinase I 89.9 0.22 7.6E-06 40.3 3.5 69 2-81 98-170 (173)
127 3v9p_A DTMP kinase, thymidylat 89.5 0.36 1.2E-05 42.2 4.8 71 2-80 153-223 (227)
128 1e6c_A Shikimate kinase; phosp 89.4 0.23 7.7E-06 40.2 3.2 72 2-82 95-169 (173)
129 1rz3_A Hypothetical protein rb 89.2 0.082 2.8E-06 44.7 0.4 33 31-63 166-200 (201)
130 4edh_A DTMP kinase, thymidylat 88.9 0.37 1.3E-05 41.6 4.4 76 2-81 133-208 (213)
131 3iij_A Coilin-interacting nucl 88.9 0.72 2.5E-05 37.6 6.0 72 2-80 98-174 (180)
132 3dl0_A Adenylate kinase; phosp 88.0 0.81 2.8E-05 38.5 5.9 21 1-21 107-127 (216)
133 3tmk_A Thymidylate kinase; pho 87.4 0.58 2E-05 40.6 4.7 74 2-82 127-205 (216)
134 3a4m_A L-seryl-tRNA(SEC) kinas 87.2 2.4 8.1E-05 37.1 8.7 68 2-82 101-172 (260)
135 1y63_A LMAJ004144AAA protein; 85.0 1.7 5.9E-05 35.7 6.3 21 1-21 101-121 (184)
136 3cm0_A Adenylate kinase; ATP-b 84.8 1.1 3.8E-05 36.5 4.9 73 2-81 107-184 (186)
137 2v54_A DTMP kinase, thymidylat 84.4 1.5 5.1E-05 36.2 5.6 70 2-81 123-192 (204)
138 1zd8_A GTP:AMP phosphotransfer 84.3 0.96 3.3E-05 38.5 4.5 21 2-22 109-129 (227)
139 3fb4_A Adenylate kinase; psych 84.1 0.92 3.1E-05 38.1 4.2 21 1-21 107-127 (216)
140 1gtv_A TMK, thymidylate kinase 82.6 0.26 8.8E-06 41.3 0.1 72 2-78 134-208 (214)
141 3lnc_A Guanylate kinase, GMP k 80.2 1.7 5.9E-05 37.0 4.5 52 3-63 142-193 (231)
142 1ak2_A Adenylate kinase isoenz 80.0 4.7 0.00016 34.3 7.3 21 2-22 124-144 (233)
143 2vli_A Antibiotic resistance p 75.9 5.8 0.0002 31.8 6.3 18 5-22 109-126 (183)
144 1e4v_A Adenylate kinase; trans 75.1 3.9 0.00013 34.2 5.3 23 1-23 103-125 (214)
145 2pez_A Bifunctional 3'-phospho 75.0 3 0.0001 33.8 4.4 18 2-19 106-123 (179)
146 1aky_A Adenylate kinase; ATP:A 73.8 8.3 0.00028 32.3 7.0 22 1-22 112-133 (220)
147 2yvu_A Probable adenylyl-sulfa 70.9 2.3 7.8E-05 34.8 2.7 17 2-18 114-130 (186)
148 1z6g_A Guanylate kinase; struc 70.7 11 0.00037 31.8 7.1 69 3-79 139-207 (218)
149 1m7g_A Adenylylsulfate kinase; 70.1 2.4 8.1E-05 35.6 2.6 16 2-17 133-148 (211)
150 2xb4_A Adenylate kinase; ATP-b 66.3 8.1 0.00028 32.7 5.3 21 2-22 107-127 (223)
151 3tlx_A Adenylate kinase 2; str 64.9 7.3 0.00025 33.6 4.8 23 1-23 136-158 (243)
152 3umf_A Adenylate kinase; rossm 63.6 6.3 0.00022 34.0 4.1 78 1-86 133-216 (217)
153 1ex7_A Guanylate kinase; subst 62.2 19 0.00063 30.1 6.7 67 3-77 116-182 (186)
154 1p6x_A Thymidine kinase; P-loo 61.2 2.9 0.0001 38.7 1.6 45 2-51 159-203 (334)
155 3tau_A Guanylate kinase, GMP k 58.3 9.7 0.00033 31.8 4.3 65 3-77 122-186 (208)
156 2j41_A Guanylate kinase; GMP, 57.0 8.9 0.00031 31.3 3.8 25 53-82 161-185 (207)
157 3be4_A Adenylate kinase; malar 52.3 43 0.0015 27.7 7.5 22 2-23 113-134 (217)
158 1ltq_A Polynucleotide kinase; 51.8 16 0.00056 31.9 4.9 39 3-43 108-146 (301)
159 3ix9_A Dihydrofolate reductase 49.9 46 0.0016 28.0 7.1 53 224-296 101-153 (190)
160 1m8p_A Sulfate adenylyltransfe 49.9 3 0.0001 41.4 -0.5 16 3-18 498-513 (573)
161 3uie_A Adenylyl-sulfate kinase 44.7 22 0.00074 29.2 4.3 16 3-18 125-140 (200)
162 1osn_A Thymidine kinase, VZV-T 44.5 8.7 0.0003 35.6 1.8 44 2-50 168-211 (341)
163 1ly1_A Polynucleotide kinase; 44.3 21 0.00071 28.1 4.0 37 3-41 108-144 (181)
164 3hix_A ALR3790 protein; rhodan 39.9 69 0.0023 23.4 6.1 45 210-264 52-96 (106)
165 3sr0_A Adenylate kinase; phosp 39.4 38 0.0013 28.5 5.0 23 1-23 104-126 (206)
166 1qhx_A CPT, protein (chloramph 38.2 74 0.0025 24.9 6.5 19 3-21 115-133 (178)
167 2gks_A Bifunctional SAT/APS ki 37.9 20 0.0007 35.1 3.5 70 3-84 472-541 (546)
168 3ch4_B Pmkase, phosphomevalona 36.8 47 0.0016 28.3 5.1 63 4-82 130-195 (202)
169 2bbw_A Adenylate kinase 4, AK4 36.7 85 0.0029 26.4 7.0 22 1-22 128-149 (246)
170 1vp8_A Hypothetical protein AF 36.6 92 0.0032 26.6 6.8 52 221-276 27-78 (201)
171 3dah_A Ribose-phosphate pyroph 36.2 87 0.003 28.5 7.2 74 170-249 18-95 (319)
172 3tvt_A Disks large 1 tumor sup 36.1 72 0.0025 28.5 6.6 66 3-80 212-277 (292)
173 4dey_A Voltage-dependent L-typ 35.5 39 0.0013 31.2 4.7 71 3-82 253-323 (337)
174 1gmx_A GLPE protein; transfera 34.3 56 0.0019 23.8 4.8 44 210-263 58-101 (108)
175 4gmk_A Ribose-5-phosphate isom 34.0 33 0.0011 29.9 3.8 69 219-289 26-103 (228)
176 1sby_A Alcohol dehydrogenase; 33.2 1.7E+02 0.006 24.3 8.4 55 208-267 3-57 (254)
177 3cr8_A Sulfate adenylyltranfer 33.2 34 0.0012 33.6 4.2 67 3-78 471-538 (552)
178 2gcu_A Putative hydroxyacylglu 32.4 1.2E+02 0.0041 25.7 7.2 56 210-273 27-88 (245)
179 1s96_A Guanylate kinase, GMP k 32.2 1.1E+02 0.0039 25.6 7.0 65 3-78 131-196 (219)
180 1c3p_A Protein (HDLP (histone 32.1 40 0.0014 31.5 4.3 61 225-292 146-207 (375)
181 3t4e_A Quinate/shikimate dehyd 31.9 62 0.0021 29.3 5.4 36 207-248 145-180 (312)
182 3tum_A Shikimate dehydrogenase 30.9 56 0.0019 28.9 4.9 55 207-267 122-178 (269)
183 3hnn_A Putative diflavin flavo 30.7 84 0.0029 26.8 6.0 56 211-271 51-112 (262)
184 4gud_A Imidazole glycerol phos 30.5 81 0.0028 25.9 5.7 52 211-291 3-54 (211)
185 3jyo_A Quinate/shikimate dehyd 30.4 58 0.002 28.9 4.9 35 207-247 124-158 (283)
186 3dfr_A Dihydrofolate reductase 30.0 1.4E+02 0.0048 24.0 6.9 45 225-276 78-122 (162)
187 3dfz_A SIRC, precorrin-2 dehyd 29.9 56 0.0019 28.1 4.6 60 201-269 22-81 (223)
188 3s5j_B Ribose-phosphate pyroph 29.7 1.4E+02 0.0049 27.1 7.5 73 171-249 15-91 (326)
189 1x6v_B Bifunctional 3'-phospho 29.7 18 0.00063 36.2 1.6 68 2-79 153-222 (630)
190 2jtq_A Phage shock protein E; 29.7 88 0.003 21.6 5.0 33 209-246 40-72 (85)
191 1qh5_A Glyoxalase II, protein 29.6 95 0.0033 26.7 6.2 52 210-271 22-79 (260)
192 1z63_A Helicase of the SNF2/RA 28.3 87 0.003 29.2 6.1 58 210-269 56-116 (500)
193 3t7y_A YOP proteins translocat 27.9 66 0.0023 24.2 4.1 67 54-127 7-91 (97)
194 1u9y_A RPPK;, ribose-phosphate 27.7 1.5E+02 0.0052 26.1 7.3 64 181-249 21-87 (284)
195 3gk5_A Uncharacterized rhodane 25.0 1.5E+02 0.005 21.6 5.7 45 209-264 54-98 (108)
196 2x5n_A SPRPN10, 26S proteasome 24.6 1.5E+02 0.005 24.5 6.2 48 211-262 108-159 (192)
197 1e2k_A Thymidine kinase; trans 24.4 31 0.0011 31.6 2.0 44 2-50 156-199 (331)
198 1kjw_A Postsynaptic density pr 24.1 1.7E+02 0.0057 26.0 6.8 66 3-80 217-282 (295)
199 1h7n_A 5-aminolaevulinic acid 24.1 2.7E+02 0.0093 25.6 8.2 50 223-274 68-136 (342)
200 3gmt_A Adenylate kinase; ssgci 24.0 41 0.0014 29.1 2.6 23 1-23 111-133 (230)
201 3bzs_A ESCU; auto cleavage pro 23.9 75 0.0026 25.4 3.9 67 54-127 46-130 (137)
202 2jlj_A YSCU, YOP proteins tran 23.5 75 0.0026 25.6 3.9 68 54-128 45-130 (144)
203 3ilm_A ALR3790 protein; rhodan 23.4 1.1E+02 0.0037 23.7 4.9 42 210-261 56-97 (141)
204 3tnl_A Shikimate dehydrogenase 23.0 1.1E+02 0.0038 27.6 5.5 35 207-247 151-185 (315)
205 1dek_A Deoxynucleoside monopho 23.0 85 0.0029 27.2 4.5 22 2-23 169-190 (241)
206 2j48_A Two-component sensor ki 22.3 1.8E+02 0.0062 19.8 5.6 14 211-224 2-15 (119)
207 4a57_A Nucleoside-triphosphata 22.2 42 0.0015 33.3 2.5 26 217-242 461-486 (611)
208 2qed_A Hydroxyacylglutathione 21.9 2.1E+02 0.0071 24.4 6.9 53 210-272 28-86 (258)
209 3out_A Glutamate racemase; str 21.6 34 0.0012 30.2 1.6 44 224-269 56-99 (268)
210 3fbt_A Chorismate mutase and s 21.5 90 0.0031 27.7 4.4 62 207-276 119-190 (282)
211 1eg2_A Modification methylase 21.4 44 0.0015 30.2 2.3 67 213-294 244-313 (319)
212 3kht_A Response regulator; PSI 21.2 2E+02 0.0068 21.0 5.9 49 210-264 5-53 (144)
213 2ji4_A Phosphoribosyl pyrophos 21.1 2.7E+02 0.0094 25.7 7.9 64 181-249 53-120 (379)
214 3s99_A Basic membrane lipoprot 21.0 1.6E+02 0.0054 26.9 6.1 44 224-270 73-116 (356)
215 2xvy_A Chelatase, putative; me 21.0 61 0.0021 28.0 3.2 27 224-252 187-213 (269)
216 3tsz_A Tight junction protein 20.8 3.2E+02 0.011 25.2 8.3 70 3-80 312-381 (391)
217 1boo_A Protein (N-4 cytosine-s 20.8 43 0.0015 30.1 2.2 39 213-260 254-292 (323)
218 3ug7_A Arsenical pump-driving 20.6 2.7E+02 0.0093 24.9 7.6 83 210-296 238-335 (349)
219 3pwz_A Shikimate dehydrogenase 20.1 1.2E+02 0.0041 26.6 4.9 49 207-263 117-165 (272)
220 3ca8_A Protein YDCF; two domai 20.0 86 0.003 27.6 3.9 59 208-266 112-171 (266)
No 1
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=100.00 E-value=5.7e-65 Score=453.61 Aligned_cols=207 Identities=32% Similarity=0.534 Sum_probs=197.6
Q ss_pred CCCceeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeec-cceeEeee
Q 022342 89 IYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSI 167 (298)
Q Consensus 89 ~~~~l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~-~~i~~V~I 167 (298)
.++|+|+++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+| +++|.++. +++|+|||
T Consensus 7 ~~~~v~v~~h-p~i~~~lt~lRd~~t~~~~Fr~~~~rl~~lL~yEa~~~lp~~~~~V~TP~g-~~~g~~~~~~~i~~V~I 84 (217)
T 3dmp_A 7 RFPNLFILDH-PLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLV-EIDAPVIAGKKLAIVPV 84 (217)
T ss_dssp TCTTEEEECC-HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSC-EEEEEEECGGGEEEEEE
T ss_pred CCCCeEecCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCe-EEEEEEecCCcEEEEEe
Confidence 4689999998 589999999999999999999999999999999999999999999999999 58899986 89999999
Q ss_pred hH---HHHHHHHHhccCCccceEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 022342 168 VR---SMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII 244 (298)
Q Consensus 168 lR---~m~~~~~~~~p~a~~g~i~i~R~~~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~ 244 (298)
+| +|++++++++|++++|+|++|||++|.+..||.++| +++++.|||+|||+|||+|+++|++.|+++|+++++|+
T Consensus 85 lRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~ 163 (217)
T 3dmp_A 85 LRAGVGMSDGLLELIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLM 163 (217)
T ss_dssp ETTTHHHHHHHHHHCTTSEECEEECSCCCSSSCCCSEEECC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEE
T ss_pred cccchHHHHHHHHhCcCCceeEEEEEECCCCCcEEEeecCC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEE
Confidence 99 899999999999999999999999995578999999 99999999999999999999999999999999889999
Q ss_pred EEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCCCC
Q 022342 245 FLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 298 (298)
Q Consensus 245 vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt~~ 298 (298)
++|++++++|++++.++||+|+||||+||++||++|||+|||||||||||||+.
T Consensus 164 ~~~~vaa~egl~~l~~~~P~v~i~ta~iD~~Lne~~yIvPGlGDaGDR~fgt~~ 217 (217)
T 3dmp_A 164 FLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIVPGLGDAGDRLFGTKN 217 (217)
T ss_dssp EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTSCEESSCSCHHHHHHC---
T ss_pred EEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCCCccCCCCCHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999999999999974
No 2
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=100.00 E-value=5e-63 Score=447.72 Aligned_cols=214 Identities=52% Similarity=0.962 Sum_probs=205.0
Q ss_pred cccccCCCceeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeecccee
Q 022342 84 HDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLC 163 (298)
Q Consensus 84 ~~l~~~~~~l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~ 163 (298)
+..++.++||+++.++|+++||+|+|||++|++.+||++++||++||+|||++++|+++++|+||+|.++.|..+.+++|
T Consensus 26 ~~~~~~~~~v~~~~~hp~i~~~lt~lRd~~t~~~~Fr~~~~rl~~ll~yEa~~~lp~~~~~v~TP~g~~~~g~~~~~~l~ 105 (243)
T 1bd3_D 26 QDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKIC 105 (243)
T ss_dssp HHHHHHCTTEEECCCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEECTTSCEEEEEEECCCEE
T ss_pred cccccCCCcEEEecCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCcceEeeeeccCcEE
Confidence 34566789999996667899999999999999999999999999999999999999999999999998888988889999
Q ss_pred EeeehH---HHHHHHHHhccCCccceEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCC
Q 022342 164 GVSIVR---SMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVP 239 (298)
Q Consensus 164 ~V~IlR---~m~~~~~~~~p~a~~g~i~i~R~~~t~-~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~ 239 (298)
+||||| +|++++++++|++++|+|+++||++|+ +..||.++|.+++++.|||+|||+|||+|+.+|++.|+++|++
T Consensus 106 ~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~~~ai~~L~~~G~~ 185 (243)
T 1bd3_D 106 GVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVK 185 (243)
T ss_dssp EEEEETTTHHHHHHHHHHSTTCCEEEEEEEECSSSCCEEEEEEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHHTCC
T ss_pred EEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcCCCCCeEEEeccCCcccCCCEEEEECCccccHHHHHHHHHHHHHcCCC
Confidence 999999 899999999999999999999999998 5789999999999999999999999999999999999999997
Q ss_pred CccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCCC
Q 022342 240 ESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 297 (298)
Q Consensus 240 ~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt~ 297 (298)
+++|+++|++++++|++++.++||+++|||++||++||++|||+|||||||||||||+
T Consensus 186 p~~I~~~~lvaap~g~~~l~~~~p~v~I~ta~ID~~Lne~~yIvPGlGDaGDR~fGt~ 243 (243)
T 1bd3_D 186 EERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGTM 243 (243)
T ss_dssp GGGEEEEEEEECHHHHHHHHHHCTTSEEEEEEECSEECTTCCEESCCSCHHHHHHTCC
T ss_pred cceEEEEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCceecCCCCcHHHhhcCCC
Confidence 7899999999999999999999999999999999999999999999999999999995
No 3
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=100.00 E-value=8.1e-62 Score=433.19 Aligned_cols=200 Identities=27% Similarity=0.430 Sum_probs=190.9
Q ss_pred ceeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeee-c-cceeEeeehH
Q 022342 92 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDF-C-KKLCGVSIVR 169 (298)
Q Consensus 92 ~l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~-~-~~i~~V~IlR 169 (298)
|+|+++|| +++||+|+|||++|++.+||++++||++||+|||++++|+++++|+||+|.++.|... . +++|+|||+|
T Consensus 2 ~v~v~~hp-~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~l~~~~~~v~TP~g~~~~~~~~~~~~~i~iV~IlR 80 (216)
T 1xtt_A 2 PLYVIDKP-ITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLGVKTKGVDITDLNNIVIINILR 80 (216)
T ss_dssp CEEECCCH-HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCCEEEEEECTTSCEEEEEECGGGGSEEEEEEET
T ss_pred ceEEcCCH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCceeEEEECCCccEecceEecCCCcEEEEeecC
Confidence 69999985 7999999999999999999999999999999999999999999999999987766544 4 7999999999
Q ss_pred ---HHHHHHHHhccCCccceEEEEecCCC-------C-ceeEeccCCCCCCCc--EEEEEcCcccchHHHHHHHHHHHHc
Q 022342 170 ---SMENALRACCKGIKIGKILIHRDGDN-------G-KQLIYEKLPNDISER--HVLLLDPVLATGNSANQAIQLLIEK 236 (298)
Q Consensus 170 ---~m~~~~~~~~p~a~~g~i~i~R~~~t-------~-~~~~y~klP~~i~~~--~Vil~Dp~lATG~t~~~ai~~L~~~ 236 (298)
+|++++++++|++++|+|++|||++| . +..||.++| +++++ .|||+|||+|||+|+++|++.|++
T Consensus 81 aG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~p~~~y~klP-~i~~~~~~VilvDp~laTG~T~~~ai~~L~~- 158 (216)
T 1xtt_A 81 AAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKKIP-DIRAKVDNVIIADPMIATASTMLKVLEEVVK- 158 (216)
T ss_dssp TTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCCSCCCEEEEEEECC-CCCTTTCEEEEECSEESSSHHHHHHHHHHGG-
T ss_pred CcHHHHHHHHHHcccCccceEEEEECCCcccccccccCceEeeccCC-CccCCcceEEEEcCCccchHHHHHHHHHHHh-
Confidence 89999999999999999999999988 4 468999999 99999 999999999999999999999999
Q ss_pred CCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccC
Q 022342 237 GVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFG 295 (298)
Q Consensus 237 g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fg 295 (298)
|++ ++|+++|++++++|++++.++||+|+|||++||++||++|||+||||||||||||
T Consensus 159 G~p-~~I~~~~~vaa~~gl~~l~~~~P~v~I~ta~iD~~Lne~~yIvPGlGDaGDR~fg 216 (216)
T 1xtt_A 159 ANP-KRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG 216 (216)
T ss_dssp GCC-SEEEEECSEEEHHHHHHHHHHCTTSEEEESEEESEECTTSCEESSCSCHHHHHHC
T ss_pred CCC-CeEEEEEEecCHHHHHHHHHHCCCcEEEEEEecCCcCCCCCccCCCCChHhhccC
Confidence 987 8999999999999999999999999999999999999999999999999999998
No 4
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=100.00 E-value=5.4e-61 Score=425.78 Aligned_cols=203 Identities=30% Similarity=0.422 Sum_probs=195.4
Q ss_pred CceeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeec-cceeEeeehH
Q 022342 91 PNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVR 169 (298)
Q Consensus 91 ~~l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~-~~i~~V~IlR 169 (298)
+|+|+++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .++|..+. +++|+|||||
T Consensus 1 ~~v~v~~h-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~-~~~g~~~~g~~l~~V~ILr 78 (208)
T 2ehj_A 1 KKIVEVKH-PLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNG-PVEIDQIKGKKITVVPILR 78 (208)
T ss_dssp CEEEECCC-HHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEETTE-EEEEEEECSSCCEEEEBTT
T ss_pred CCeEEcCC-HHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCc-cEEEEEecCCceEEEEeec
Confidence 46899998 589999999999999999999999999999999999999999999999999 57888887 7999999999
Q ss_pred ---HHHHHHHHhccCCccceEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 022342 170 ---SMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF 245 (298)
Q Consensus 170 ---~m~~~~~~~~p~a~~g~i~i~R~~~t~-~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~v 245 (298)
+|++++++++|++++|+|+++||++|+ ++.||.++|.+++|++|||+|||+|||+|+.+|++.|+++|+ ++|.+
T Consensus 79 aG~~~~~~l~~~ip~~~vg~i~~~rd~~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~~~ai~~L~~~G~--~~I~~ 156 (208)
T 2ehj_A 79 AGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGC--SSIKV 156 (208)
T ss_dssp GGGGGHHHHHHHCTTCEECEEEEEECTTTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHHHHHHHHHHHTTC--CEEEE
T ss_pred CHHHHHHHHHHhCCcCceeEEEEEEcCCCCceEEEecCCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEE
Confidence 899999999999999999999999998 467999999999999999999999999999999999999998 79999
Q ss_pred EEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCCC
Q 022342 246 LNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 297 (298)
Q Consensus 246 v~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt~ 297 (298)
+|++++++|++++.++||+++|||++||++||++|||+|||||||||||||+
T Consensus 157 ~~lv~~p~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt~ 208 (208)
T 2ehj_A 157 LVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK 208 (208)
T ss_dssp EEEEECHHHHHHHHHHCTTSEEEESCBCSEECTTSCEESCCSCHHHHHHTCC
T ss_pred EEEEeCHHHHHHHHHHCCCcEEEEEecCCCCCCCceecCCCCcHHHhhcCCC
Confidence 9999999999999999999999999999999999999999999999999995
No 5
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=100.00 E-value=6.3e-61 Score=425.33 Aligned_cols=202 Identities=32% Similarity=0.509 Sum_probs=188.2
Q ss_pred ceeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeec-cceeEeeehH-
Q 022342 92 NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVR- 169 (298)
Q Consensus 92 ~l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~-~~i~~V~IlR- 169 (298)
++|+++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .++|..+. +++|+|||||
T Consensus 2 ~v~v~~~-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~g-~~~g~~~~g~~l~~V~ILra 79 (208)
T 1v9s_A 2 RITLVDH-PLVQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRDLELEETTVETPIA-PARVKVLSGKKLALVAILRA 79 (208)
T ss_dssp CEEECCC-HHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSS-EEEEEEECSSCCEEEEETTT
T ss_pred ceEEcCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHccCCCeEEEEECCCc-eEEEEEecCCceEEEEeccc
Confidence 6899998 589999999999999999999999999999999999999999999999999 47888887 7999999999
Q ss_pred --HHHHHHHHhccCCccceEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEE
Q 022342 170 --SMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFL 246 (298)
Q Consensus 170 --~m~~~~~~~~p~a~~g~i~i~R~~~t~-~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv 246 (298)
+|++++++++|++++|+|+++||++|+ ++.||.++|.+++||+|||+|||+|||+|+.+|++.|+++|+ ++|.++
T Consensus 80 G~~~~~~l~~~ip~~~vg~I~~~rd~~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~~~ 157 (208)
T 1v9s_A 80 GLVMVEGILKLVPHARVGHIGLYRDPESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSASLALSLLKERGA--TGVKLM 157 (208)
T ss_dssp HHHHHHHHHTTCTTCEEEEEEEC---------CEEEECCSCGGGSCEEEECSEESSSHHHHHHHHHHHHTTC--CSCEEE
T ss_pred hHHHHHHHHHhCCCCeeeEEEEEEcCCCCCceEEeccCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEEE
Confidence 899999999999999999999999998 467999999999999999999999999999999999999998 799999
Q ss_pred EEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCCC
Q 022342 247 NLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 297 (298)
Q Consensus 247 ~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt~ 297 (298)
|++++++|++++.++||++.|||++||++||++|||+|||||||||||||+
T Consensus 158 ~lv~~~~g~~~l~~~~p~v~I~t~~iD~~lne~~yIvPGlGDaGDR~fgt~ 208 (208)
T 1v9s_A 158 AILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGTK 208 (208)
T ss_dssp EEEECHHHHHHHHHHCTTCEEEEEEECSEECTTSCEESSCSCHHHHHHTCC
T ss_pred EEEeCHHHHHHHHHHCCCcEEEEEeecCCCCCCceecCCCCcHHHhccCCC
Confidence 999999999999999999999999999999999999999999999999995
No 6
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=100.00 E-value=3.9e-60 Score=423.50 Aligned_cols=206 Identities=33% Similarity=0.490 Sum_probs=196.7
Q ss_pred cCCCceeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeec-cceeEee
Q 022342 88 KIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVS 166 (298)
Q Consensus 88 ~~~~~l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~-~~i~~V~ 166 (298)
-.++++++.+| |++++++|+|||++|++.+||++++||++||+|||++++|+++++|+||+| .++|..+. +++|+||
T Consensus 11 ~~~~~~~~~~~-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~yEa~~~lp~~~~~v~TP~g-~~~g~~~~g~~lviV~ 88 (221)
T 1o5o_A 11 HHMKNLVVVDH-PLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCEEVEVETPIT-KTIGYRINDKDIVVVP 88 (221)
T ss_dssp -CCTTEEECCC-HHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSSC-EEEEEECCSTTEEEEE
T ss_pred cccceEEecCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEECCCc-eEEEEEecCCeEEEEE
Confidence 35678888887 589999999999999999999999999999999999999999999999999 47888887 7999999
Q ss_pred ehH---HHHHHHHHhccCCccceEEEEecCCCCc-eeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCcc
Q 022342 167 IVR---SMENALRACCKGIKIGKILIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESH 242 (298)
Q Consensus 167 IlR---~m~~~~~~~~p~a~~g~i~i~R~~~t~~-~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~ 242 (298)
|+| +|++++.+++|++++|+|+++|+++|++ ..||.++|.+++|+.|||+|||+|||+|+.+|++.|+++|+ ++
T Consensus 89 IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~~ai~~L~~~G~--~~ 166 (221)
T 1o5o_A 89 ILRAGLVMADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKENGA--KK 166 (221)
T ss_dssp EETTHHHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECCCCCTTCEEEEECSEESSSHHHHHHHHHHHHTTC--CE
T ss_pred EecchHHHHHHHHHhCCCCcEEEEEEEEcCCCCceeEEEecCCCccCCCEEEEECCccccHHHHHHHHHHHHHcCC--CE
Confidence 999 8999999999999999999999999884 68999999999999999999999999999999999999998 79
Q ss_pred EEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCCC
Q 022342 243 IIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 297 (298)
Q Consensus 243 I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt~ 297 (298)
|.++|++++++|++++.++||++.|||++||++||++|||+|||||||||||||+
T Consensus 167 I~~~~lv~~~~g~~~l~~~~p~v~I~t~~ID~~Lne~~yIvPGlGDaGDR~fGt~ 221 (221)
T 1o5o_A 167 ITLVALIAAPEGVEAVEKKYEDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRTK 221 (221)
T ss_dssp EEEECSEECHHHHHHHHHHCTTCEEEESEECSEECTTSCEESSCSCHHHHHHTCC
T ss_pred EEEEEEEeCHHHHHHHHHHCCCcEEEEEeccCCCCCCceecCCCCcHHHhccCCC
Confidence 9999999999999999999999999999999999999999999999999999995
No 7
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=100.00 E-value=5.4e-58 Score=406.52 Aligned_cols=201 Identities=24% Similarity=0.378 Sum_probs=193.4
Q ss_pred eeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeec-cceeEeeehH--
Q 022342 93 VYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVR-- 169 (298)
Q Consensus 93 l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~-~~i~~V~IlR-- 169 (298)
+++++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++++|+||+|. +.|..+. +++|+|||||
T Consensus 2 v~~~~h-p~i~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~-~~~~~~~g~~~~~V~ILraG 79 (208)
T 2e55_A 2 IVELSH-PLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKDILLEEKEVRTWIGN-KRFNYLNEEEIVFVPILRAG 79 (208)
T ss_dssp EEECCC-HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEETTEE-EEEEECCGGGEEEEEEETTT
T ss_pred EEecCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCceeEEeCCCCc-eEeeeecCCcEEEEEEecch
Confidence 678888 5899999999999999999999999999999999999999999999999994 7888886 7999999999
Q ss_pred -HHHHHHHHhccCCccceEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022342 170 -SMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 247 (298)
Q Consensus 170 -~m~~~~~~~~p~a~~g~i~i~R~~~t~-~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~ 247 (298)
+|++++++++|++++|+|+++||++|+ +..||.++| +++|++|||+|||+|||+|+.+|++.|+++|+ ++|.++|
T Consensus 80 ~~~~~~l~~~lp~~~vg~i~~~rd~~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~~~ai~~L~~~G~--~~I~~~~ 156 (208)
T 2e55_A 80 LSFLEGALQVVPNAKVGFLGIKRNEETLESHIYYSRLP-ELKGKIVVILDPMLATGGTLEVALREILKHSP--LKVKSVH 156 (208)
T ss_dssp HHHHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECC-CCBTSEEEEECSEESSSHHHHHHHHHHHTTCB--SEEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEEEEecCCCceEEEecCCC-CCCCCEEEEECCccccHHHHHHHHHHHHHcCC--CEEEEEE
Confidence 899999999999999999999999988 578899999 99999999999999999999999999999998 7999999
Q ss_pred EEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCCCC
Q 022342 248 LISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 298 (298)
Q Consensus 248 ~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt~~ 298 (298)
++++++|++++.++||++.|||++||+++|+++||+|||||||||+|||++
T Consensus 157 lv~~~~g~~~l~~~~p~v~I~t~~iD~~l~e~~~I~PglgdagdR~fgt~~ 207 (208)
T 2e55_A 157 AIAAPEGLKRIEEKFKEVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAVSV 207 (208)
T ss_dssp EEECHHHHHHHHHHCTTSEEEEEEECSEECTTSCEESSCSSHHHHHHSCCC
T ss_pred EEECHHHHHHHHHHCCCcEEEEEeecCCCCCCceeccCccHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999974
No 8
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=100.00 E-value=2.2e-55 Score=390.52 Aligned_cols=204 Identities=35% Similarity=0.528 Sum_probs=194.6
Q ss_pred CCceeeccchHHHHHHhHhhhcCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeec-cceeEeeeh
Q 022342 90 YPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIV 168 (298)
Q Consensus 90 ~~~l~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~-~~i~~V~Il 168 (298)
+.|+|+++| |+++|++|+|||++|++.+||++++||++||+|||++++|+++.+|+||+|. +.|.+++ +++|+||||
T Consensus 1 ~~~v~~~~~-p~~~~~lt~lRd~~t~~~~Fr~~~~~l~~ll~~ea~~~l~~~~~~V~tPl~~-~~~~~~~~~~~~vV~Il 78 (209)
T 1i5e_A 1 MGKVYVFDH-PLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRDLPLEEVEIETPVSK-ARAKVIAGKKLGVIPIL 78 (209)
T ss_dssp -CCEEECCC-HHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHGGGCCEEEEEEECSSCE-EEEEEECCCCEEEEEBT
T ss_pred CCCeEEcCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCce-eeeeEecCCceEEEEEe
Confidence 468999998 5899999999999999999999999999999999999999999999999995 6788887 799999999
Q ss_pred H---HHHHHHHHhccCCccceEEEEecCCCCc-eeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 022342 169 R---SMENALRACCKGIKIGKILIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII 244 (298)
Q Consensus 169 R---~m~~~~~~~~p~a~~g~i~i~R~~~t~~-~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~ 244 (298)
| +|++++.+.+|++++|+++.+|+++|+. ..||.++|.+++|++|+|+|||++||+|+.+|++.|+++|+ ++|.
T Consensus 79 r~G~~~~~~L~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T~~~a~~~L~~~G~--~~I~ 156 (209)
T 1i5e_A 79 RAGIGMVDGILKLIPAAKVGHIGLYRDPQTLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDALKKRGA--KSIK 156 (209)
T ss_dssp TGGGGGHHHHHHHCTTSEECEEEEECCTTCSSCEEEEEECCTTTTTSEEEEECSEESSSHHHHHHHHHHHHTTC--CCEE
T ss_pred cCChHHHHHHHHhCCCCeEEEEEEEEcCCCCceEEEEEcCCCccCCCEEEEEcCCCcCHHHHHHHHHHHHHcCC--CEEE
Confidence 9 7999999999999999999999998874 68899999999999999999999999999999999999998 7999
Q ss_pred EEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCCC
Q 022342 245 FLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 297 (298)
Q Consensus 245 vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt~ 297 (298)
++|++++++|++++.+.||++.|||++||+++|+++||+|||||||||||||+
T Consensus 157 ~~~lv~~~~g~~~l~~~~p~~~I~t~~id~~l~~~~~i~Pglgdagdr~fgt~ 209 (209)
T 1i5e_A 157 FMCLIAAPEGVKAVETAHPDVDIYIAALDERLNDHGYIVPGLGDAGDRLFGTK 209 (209)
T ss_dssp EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTCCEESSCSCHHHHHHSCC
T ss_pred EEEEEECHHHHHHHHHhCcCcEEEEEEeCCCCCCCceEccCCchHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999995
No 9
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=99.18 E-value=3.6e-11 Score=104.06 Aligned_cols=84 Identities=48% Similarity=0.876 Sum_probs=78.6
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+|.+||+|++.+.++.|++.||..++|++...+.++|...++|.|.+|++|.+++||+||++++.+..+++.+.++|++.
T Consensus 125 ~d~~i~ld~~~~~~~~r~l~r~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~~~aD~ii~~~~~~~~~~~~~~~~i~~~ 204 (211)
T 3asz_A 125 MDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALAR 204 (211)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEESTTSCHHHHHHHHHHHTHH
T ss_pred cCEEEEEeCCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhhhhhHHHhcccchhcCeEEEeCCCcchHHHHHHHHHHHHH
Confidence 58999999999999999999999899999999999999999999999999999999999999888999999999999988
Q ss_pred cccc
Q 022342 81 LGQH 84 (298)
Q Consensus 81 l~~~ 84 (298)
+.+.
T Consensus 205 ~~~~ 208 (211)
T 3asz_A 205 LARM 208 (211)
T ss_dssp HHC-
T ss_pred HHhh
Confidence 7654
No 10
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.06 E-value=1.7e-09 Score=94.80 Aligned_cols=71 Identities=20% Similarity=0.353 Sum_probs=62.5
Q ss_pred cCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 022342 203 KLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 278 (298)
Q Consensus 203 klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~ 278 (298)
..+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++.++++.+++.... ++++..+++.+.+
T Consensus 113 ~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~V~v~~~v~~~~~~~~l~~~~---~~v~~~~~~~f~~ 183 (208)
T 1wd5_A 113 RPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGP--RRVVVAVPVASPEAVERLKARA---EVVALSVPQDFAA 183 (208)
T ss_dssp SCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCC--SEEEEEEEEBCHHHHHHHHTTS---EEEEEECCTTCCC
T ss_pred CCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCC--CEEEEEEEEcCHHHHHHhcccC---cEEEEecCcchhh
Confidence 455679999999999999999999999999999998 7899999999999999987653 8999888777643
No 11
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=99.05 E-value=3.7e-10 Score=100.73 Aligned_cols=82 Identities=63% Similarity=1.081 Sum_probs=73.6
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+|.+||+.++.++++.|++.||+ ++|++.++++++|....+|.+++|++|.++.||+||+++.+|...++.+.++|.+.
T Consensus 154 ~~~~i~v~th~~~~~~r~~~r~~-~~G~~~e~~~~~~~~~~~~~~~~~i~p~~~~aD~vi~~~~dn~~~~~~l~~~i~~~ 232 (245)
T 2jeo_A 154 FHLRLFVDTDSDVRLSRRVLRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDI 232 (245)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHT-C---CHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEESSTTCHHHHHHHHHHHHHH
T ss_pred cCeEEEEECCHHHHHHHHHHHHH-HcCCCHHHHHHHHHHhhhHhHHHhCCcchhcceEEEcCCCCccHHHHHHHHHHHHH
Confidence 37899999999999999999999 89999999999999999999999999999999999998878888999999999887
Q ss_pred ccc
Q 022342 81 LGQ 83 (298)
Q Consensus 81 l~~ 83 (298)
+++
T Consensus 233 ~~~ 235 (245)
T 2jeo_A 233 LNG 235 (245)
T ss_dssp HHT
T ss_pred Hhc
Confidence 764
No 12
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.02 E-value=3.3e-09 Score=91.12 Aligned_cols=132 Identities=22% Similarity=0.238 Sum_probs=90.7
Q ss_pred ChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhccC-CccceEEE-
Q 022342 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCKG-IKIGKILI- 189 (298)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p~-a~~g~i~i- 189 (298)
+..+|+..+++|+..+.+.. + +. ...++|+|+| .+...+.+.+.- ..++++.+
T Consensus 10 s~~~i~~~i~~La~~I~~~~----~----------~~--------~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~ 67 (177)
T 3ohp_A 10 SEQEVAQRIRELGQQITEHY----Q----------GS--------SDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTAS 67 (177)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----T----------TC--------SCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHc----C----------CC--------CCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEE
Confidence 55678888888887776541 1 00 1267888999 556677776652 45677765
Q ss_pred -EecCC--CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcE
Q 022342 190 -HRDGD--NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLK 266 (298)
Q Consensus 190 -~R~~~--t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~ 266 (298)
||++. ++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+++ .++ ...| .
T Consensus 68 ~y~~~~~~~~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~~~~~-~~~-~~~~--d 141 (177)
T 3ohp_A 68 SYGNSMQSSRDVRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREP--KSIRICTLLDKPTR-REV-DVEV--N 141 (177)
T ss_dssp C--------CCCCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG-CSS-CCCC--S
T ss_pred EEcCCCccCCcEEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCC--cEEEEEEEEECCcc-ccC-CCCc--c
Confidence 45542 23333456778889999999999999999999999999999998 68999999999876 222 2234 3
Q ss_pred EEEEeecC
Q 022342 267 IVTSEIDV 274 (298)
Q Consensus 267 i~~a~id~ 274 (298)
.++-.++.
T Consensus 142 ~~g~~~p~ 149 (177)
T 3ohp_A 142 WVGFEIPD 149 (177)
T ss_dssp EEEEECCS
T ss_pred EEEEEcCC
Confidence 56655554
No 13
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.00 E-value=3.7e-09 Score=91.11 Aligned_cols=133 Identities=17% Similarity=0.164 Sum_probs=91.4
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc-CCccceEE
Q 022342 113 GISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK-GIKIGKIL 188 (298)
Q Consensus 113 ~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p-~a~~g~i~ 188 (298)
--+..+++..+++|+..+.+.. + + ++.++|++++ .+...+.+.++ ...++++.
T Consensus 13 li~~~~i~~~i~~La~~I~~~~----~---------------~----~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~ 69 (181)
T 2ywu_A 13 QISAEAIKKRVEELGGEIARDY----Q---------------G----KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIA 69 (181)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHT----T---------------T----CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHHHHc----C---------------C----CCCEEEEECchhHHHHHHHHHHcCCCceEEEEE
Confidence 3567788888888888776541 0 1 2467788888 56677777765 34567776
Q ss_pred E--EecCC--CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCC
Q 022342 189 I--HRDGD--NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPS 264 (298)
Q Consensus 189 i--~R~~~--t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~ 264 (298)
. |+++. ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++.+ + ...|
T Consensus 70 ~~~y~~~~~~~~~v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~~-~-~~~~- 144 (181)
T 2ywu_A 70 ISSYGNAFKSSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKPSRRQ-V-EVPI- 144 (181)
T ss_dssp EC------------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECGGGCS-S-CCCC-
T ss_pred EEEecCCccccCcEEEEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCC--cEEEEEEEEECCCCcc-C-CCCC-
Confidence 5 34433 23323345677789999999999999999999999999999998 7899999999988632 2 2234
Q ss_pred cEEEEEeecC
Q 022342 265 LKIVTSEIDV 274 (298)
Q Consensus 265 v~i~~a~id~ 274 (298)
..++-.++.
T Consensus 145 -d~~g~~ip~ 153 (181)
T 2ywu_A 145 -HYLGFEIED 153 (181)
T ss_dssp -SEEEEECCS
T ss_pred -CEEEEEcCC
Confidence 455555544
No 14
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=98.96 E-value=2.3e-09 Score=94.81 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=82.5
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc-------
Q 022342 111 DRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK------- 180 (298)
Q Consensus 111 d~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p------- 180 (298)
..-.+..+|+...++|+..|..+. . .+..++|+|+| .+...+.+.+.
T Consensus 33 ~il~~~~~~~~~~~~La~~i~~~~-~----------------------~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~ 89 (217)
T 1z7g_A 33 RVFIPHGLIMDRTERLARDVMKEM-G----------------------GHHIVALCVLKGGYKFFADLLDYIKALNRNSD 89 (217)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHH-T----------------------TSCEEEEEECSSCCHHHHHHHHHHHHHHTTCS
T ss_pred eEEECHHHHHHHHHHHHHHHHHHc-C----------------------CCCCEEEEECCCCHHHHHHHHHHhCCccccCC
Confidence 344678899999999988876431 0 01345566666 23333333222
Q ss_pred ---CCccceEE--EEecCC-CCceeEe-ccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHH
Q 022342 181 ---GIKIGKIL--IHRDGD-NGKQLIY-EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPE 253 (298)
Q Consensus 181 ---~a~~g~i~--i~R~~~-t~~~~~y-~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~ 253 (298)
....+.+. -|+++. ++...+. .+.+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..++
T Consensus 90 g~~~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~--~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 90 RSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNP--KMVKVASLLVKRT 167 (217)
T ss_dssp SCCCEEEEEECBC----------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCC--SEEEEEEEEEECC
T ss_pred CceEeeeeeEEEEEecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCC--CEEEEEEEEECcc
Confidence 12234443 233332 2221222 1234578999999999999999999999999999998 6899999999888
Q ss_pred HHHHHHHhCCCcEEEEEeecCC
Q 022342 254 GIHCVCKRFPSLKIVTSEIDVA 275 (298)
Q Consensus 254 gl~~l~~~~p~v~i~~a~id~~ 275 (298)
+ +.....| ..++..++..
T Consensus 168 ~--~~~~~~~--dyvg~~~p~~ 185 (217)
T 1z7g_A 168 P--RSVGYKP--DFVGFEIPDK 185 (217)
T ss_dssp -------CCC--SEEEEEECSC
T ss_pred c--ccCCCCC--cEEEEEcCCC
Confidence 6 4555566 5666666543
No 15
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=98.93 E-value=3.6e-09 Score=91.62 Aligned_cols=130 Identities=15% Similarity=0.217 Sum_probs=91.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc-CCccceEEE-
Q 022342 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK-GIKIGKILI- 189 (298)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p-~a~~g~i~i- 189 (298)
+..+|+..+++|+..+.+.. + + ++.++|+|++ .+...+.+.+. ..+++++.+
T Consensus 14 ~~~~i~~~i~~La~~I~~~~----~---------------~----~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~ 70 (186)
T 3o7m_A 14 SEEQLQEKVKELALQIERDF----E---------------G----EEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISAS 70 (186)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----T---------------T----SCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHc----C---------------C----CCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEE
Confidence 56788888888888776541 1 1 2467788888 45566666665 245677876
Q ss_pred -EecC--CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcE
Q 022342 190 -HRDG--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLK 266 (298)
Q Consensus 190 -~R~~--~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~ 266 (298)
|++. .++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+++.+ + .-.| .
T Consensus 71 ~Y~~~~~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~~-~-~i~~--d 144 (186)
T 3o7m_A 71 SYGNQTETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKP--KALKFCTLLDKPERRK-V-DLTA--E 144 (186)
T ss_dssp ECC-------CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGCS-S-CCCC--S
T ss_pred EecCCCcccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCC--cEEEEEEEEECCCCCc-C-CCCC--C
Confidence 4442 223333446777789999999999999999999999999999998 7899999999998742 1 1223 4
Q ss_pred EEEEeec
Q 022342 267 IVTSEID 273 (298)
Q Consensus 267 i~~a~id 273 (298)
.++-.++
T Consensus 145 y~G~~ip 151 (186)
T 3o7m_A 145 YVGFQIP 151 (186)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 5555554
No 16
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=98.92 E-value=7.4e-09 Score=90.95 Aligned_cols=132 Identities=13% Similarity=0.224 Sum_probs=95.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhccC-CccceEEE
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCKG-IKIGKILI 189 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p~-a~~g~i~i 189 (298)
-+..+|+..+++|+..+.+.. + + ++.++|+|+| .+...+.+.+.- .+++++..
T Consensus 35 ~s~~~i~~~i~~LA~~I~~~~----~---------------~----~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~ 91 (204)
T 3hvu_A 35 ISEEQIQEKVLELGAIIAEDY----K---------------N----TVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAV 91 (204)
T ss_dssp ECHHHHHHHHHHHHHHHHHHT----S---------------S----SCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHc----C---------------C----CCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEE
Confidence 367789999999988876541 0 1 2467788888 566677776652 45677777
Q ss_pred Ee--cC--CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCc
Q 022342 190 HR--DG--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSL 265 (298)
Q Consensus 190 ~R--~~--~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v 265 (298)
.| ++ .++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+++-+ + ...|
T Consensus 92 ~~Y~~~~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~--~~v~~~~l~~k~~~~~-~-~~~~-- 165 (204)
T 3hvu_A 92 SSYGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKA--KSVKIVTLLDKPTGRK-V-DLKA-- 165 (204)
T ss_dssp EECSGGGTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--SEEEEEEEEECGGGCS-S-CCCC--
T ss_pred EEecCCCccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCC--CEEEEEEEEECCCCCc-C-CCCC--
Confidence 43 32 223333446778889999999999999999999999999999998 7899999999988632 1 1234
Q ss_pred EEEEEeecC
Q 022342 266 KIVTSEIDV 274 (298)
Q Consensus 266 ~i~~a~id~ 274 (298)
..++-.++.
T Consensus 166 Dy~g~~ipd 174 (204)
T 3hvu_A 166 DYVGFTVPH 174 (204)
T ss_dssp SEEEEECCS
T ss_pred CEEEEEcCC
Confidence 456665643
No 17
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=98.89 E-value=9.1e-09 Score=88.57 Aligned_cols=132 Identities=14% Similarity=0.206 Sum_probs=89.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhccC-CccceEEE
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCKG-IKIGKILI 189 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p~-a~~g~i~i 189 (298)
.+..++.....+|+..+... .+ + +..++|++.| .+...+.+.+.- ..++.+..
T Consensus 17 ~~~~~i~~~~~~La~~i~~~----~~----------~---------~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~ 73 (185)
T 2geb_A 17 ITEEQLKAKVKELGEMITRD----YE----------G---------KDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAV 73 (185)
T ss_dssp ECHHHHHHHHHHHHHHHHHH----TT----------T---------SCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEE
T ss_pred eCHHHHHHHHHHHHHHHHHH----cC----------C---------CCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEE
Confidence 45567777777777666533 10 0 1356777887 456666666642 23466654
Q ss_pred E--ecCC--CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCc
Q 022342 190 H--RDGD--NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSL 265 (298)
Q Consensus 190 ~--R~~~--t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v 265 (298)
. +++. ++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++.+ + ...|
T Consensus 74 ~~y~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~-~-~~~~-- 147 (185)
T 2geb_A 74 SSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKP--RSLKICTILDKPERRE-A-DVKV-- 147 (185)
T ss_dssp EECSTTHHHHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGCC-S-CCCC--
T ss_pred EecCCCCccCccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEECCCccc-C-CCCC--
Confidence 3 3321 22222345677789999999999999999999999999999998 7899999999998842 2 1224
Q ss_pred EEEEEeecC
Q 022342 266 KIVTSEIDV 274 (298)
Q Consensus 266 ~i~~a~id~ 274 (298)
..++-.++.
T Consensus 148 d~~g~~~p~ 156 (185)
T 2geb_A 148 DYCGFKIPD 156 (185)
T ss_dssp SEEEEECCS
T ss_pred CEEEEEcCC
Confidence 566666654
No 18
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=98.89 E-value=7.9e-10 Score=101.80 Aligned_cols=62 Identities=19% Similarity=0.334 Sum_probs=58.5
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceE------EecCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADV------IIPRG 63 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADi------ii~~~ 63 (298)
+|++|||++|.++|+.||+.||..+||++.++++++|.+. .|.|++||+|++++||+ ||+++
T Consensus 148 ~D~~IfV~a~~~~rl~Rrl~Rd~~~RG~s~e~v~~~i~~r-~~~~~r~i~p~~~~AD~~~~~~~vIDns 215 (290)
T 1a7j_A 148 ADLKIGVVPVINLEWIQKIHRDRATRGYTTEAVTDVILRR-MHAYVHCIVPQFSQTDINFQRVPVVDTS 215 (290)
T ss_dssp CSEEEEEEECHHHHHHHHHHHTSSSCCSCCCCHHHHHHHH-HHHHHHHTGGGGGTCSEEEEEEESSCCS
T ss_pred CCEEEEEECCHHHHHHHHhhhhhhhcCCChHHHHHHHHHh-CccHHHhhhhhhccCCEeeccCceecCC
Confidence 5899999999999999999999999999999999999986 99999999999999999 77763
No 19
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=98.86 E-value=2.8e-09 Score=99.59 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=79.5
Q ss_pred cceeEeeehH---HHHHHHHHhccCCccceEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 022342 160 KKLCGVSIVR---SMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 236 (298)
Q Consensus 160 ~~i~~V~IlR---~m~~~~~~~~p~a~~g~i~i~R~~~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~ 236 (298)
++.++|++.+ .+...+.+.+. ++.+.+.-.|...+.. ....++.+++||+|+|+|||++||+|+.+|++.|+++
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~-~p~~~l~k~r~~~~~~--~~~~l~~~v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~ 243 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLK-APIAIIDKRRPRPNVA--EVMNIVGNIEGKTAILIDDIIDTAGTITLAANALVEN 243 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTT-CCEEEEECC-----------CEEESCCTTCEEEEECSEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEeCcchHHHHHHHHHHhC-CCEEEEEEEeccccce--eEEEecccCCCCEEEEEecccCCCHHHHHHHHHHHHc
Confidence 4788899988 56666666663 5555443223222211 1223456899999999999999999999999999999
Q ss_pred CCCCccEEEEE--EEeCHHHHHHHHHhCCCcEEEEEeecC
Q 022342 237 GVPESHIIFLN--LISAPEGIHCVCKRFPSLKIVTSEIDV 274 (298)
Q Consensus 237 g~~~~~I~vv~--~vas~~gl~~l~~~~p~v~i~~a~id~ 274 (298)
|+ ++|.+++ .+.+.++.+++.+...+--++|.+++.
T Consensus 244 Ga--~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~t~tip~ 281 (317)
T 1dku_A 244 GA--KEVYACCTHPVLSGPAVERINNSTIKELVVTNSIKL 281 (317)
T ss_dssp TC--SEEEEECSEECCCTTHHHHHHTSSEEEEEEETTSCC
T ss_pred CC--cEEEEEEECcccChHHHHHHhhCCCCEEEEeCCcCc
Confidence 99 6888888 567778999998766677788888754
No 20
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=98.85 E-value=1.3e-09 Score=102.05 Aligned_cols=68 Identities=22% Similarity=0.293 Sum_probs=58.2
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCC---CH----------------HHHHHHHHhhhhhHHHhhcccccccceEEec
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGR---DV----------------DSVLEQYAKFVKPAFDDFVLPSKKYADVIIP 61 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr---~~----------------~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~ 61 (298)
+|++||||+|.++|+.|++.||..+||. ++ ....++|....+|.+++||.|++++||+||+
T Consensus 227 ~D~~I~Vda~~d~~~~R~i~Rd~~~r~~a~~~~~s~~~~y~~~s~~ea~~~a~~~w~~~~~pn~~~~I~ptr~~Adlil~ 306 (321)
T 3tqc_A 227 FDFSLFVDAQAQVIQKWYIDRVLSFWRTTFKDPHSYFHYLTQMSETEVAAFAKHVWNEINKVNLMENILPYKNRAQLILE 306 (321)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHHHTGGGSTTSTTGGGGGSCHHHHHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEE
T ss_pred cCeEEEEECCHHHHHHHHHHhcchhhhhhccChHHHHHHHhcCCHHHHHHHHHHHHHhccccCHHHhCccCccCceEEEe
Confidence 6999999999999999999999988862 22 2344667777789999999999999999999
Q ss_pred CCCCCch
Q 022342 62 RGGDNHV 68 (298)
Q Consensus 62 ~~~~~~~ 68 (298)
.+.++.+
T Consensus 307 ~g~~~~v 313 (321)
T 3tqc_A 307 KAADHSI 313 (321)
T ss_dssp ECTTSCE
T ss_pred cCCCCcE
Confidence 9998864
No 21
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=98.83 E-value=9.9e-09 Score=92.78 Aligned_cols=132 Identities=10% Similarity=0.040 Sum_probs=92.3
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc----------
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK---------- 180 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p---------- 180 (298)
.+..+|+..+++|+..+.++.- + ++.++|+|++ .+...+.+.+.
T Consensus 64 i~~~~I~~~i~~LA~~I~~~~~--------------~---------~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~ 120 (250)
T 3ozf_A 64 VPNGVIKNRIEKLAYDIKKVYN--------------N---------EEFHILCLLKGSRGFFTALLKHLSRIHNYSAVET 120 (250)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHT--------------T---------CCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTT
T ss_pred ECHHHHHHHHHHHHHHHHHHcC--------------C---------CCCEEEEECcchHHHHHHHHHHhccccccccccc
Confidence 5677899999999988876531 1 1467788888 33344444332
Q ss_pred ---CCccceEEE--EecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022342 181 ---GIKIGKILI--HRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 254 (298)
Q Consensus 181 ---~a~~g~i~i--~R~~~t~-~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~g 254 (298)
..+++++.+ |+++.+. .......++.+++|++|+|+||+++||+|+.++++.|+++|+ +.|.+++++..+++
T Consensus 121 gklP~~v~fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~--~~v~va~l~~k~~~ 198 (250)
T 3ozf_A 121 SKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEI--KTVAIACLFIKRTP 198 (250)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCC--SEEEEEEEEEECCT
T ss_pred cCCCceEEEEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 345777765 4454432 323346677788999999999999999999999999999998 78999999988876
Q ss_pred HHHHHHhCCCcEEEEEeecC
Q 022342 255 IHCVCKRFPSLKIVTSEIDV 274 (298)
Q Consensus 255 l~~l~~~~p~v~i~~a~id~ 274 (298)
.+ + .-.| ..++-.+++
T Consensus 199 r~-~-~i~~--DyvG~~ipd 214 (250)
T 3ozf_A 199 LW-N-GFKA--DFVGFSIPD 214 (250)
T ss_dssp TC-C-CCBC--SEEEEEECS
T ss_pred cc-C-CCCC--cEEEEEcCC
Confidence 32 1 1123 456666654
No 22
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=98.80 E-value=3.6e-09 Score=94.09 Aligned_cols=133 Identities=17% Similarity=0.183 Sum_probs=82.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc---------
Q 022342 113 GISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK--------- 180 (298)
Q Consensus 113 ~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p--------- 180 (298)
-.+..++.....+|+..+..+. + .++.++|+|+| .+...+.+.+.
T Consensus 43 l~~~~~i~~~~~~La~~i~~~~----~-------------------~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~ 99 (225)
T 2jbh_A 43 LIPHGIIVDRIERLAKDIMKDI----G-------------------YSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRF 99 (225)
T ss_dssp EECHHHHHHHHHHHHHHHHHHH----T-------------------TSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCC
T ss_pred EECHHHHHHHHHHHHHHHHHHc----C-------------------CCCCEEEEEcCCCEehhHHHHHHhhhhccccccC
Confidence 4566677778888777765432 0 01356677777 33344443332
Q ss_pred -CCccceEEE--EecCCC-Cc-eeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHH
Q 022342 181 -GIKIGKILI--HRDGDN-GK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGI 255 (298)
Q Consensus 181 -~a~~g~i~i--~R~~~t-~~-~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl 255 (298)
...++.+.. |+++.+ +. +......+.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++.
T Consensus 100 ~p~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga--~~V~va~l~~k~~~~ 177 (225)
T 2jbh_A 100 VSMKVDFIRLKSYRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKP--NMIKVASLLVKRTSR 177 (225)
T ss_dssp CCEEEEEEEEC----------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECC-C
T ss_pred CCceEEEEEEEeccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCccc
Confidence 234666664 333222 22 22222344578999999999999999999999999999998 689999999877762
Q ss_pred HHHHHhCCCcEEEEEeecC
Q 022342 256 HCVCKRFPSLKIVTSEIDV 274 (298)
Q Consensus 256 ~~l~~~~p~v~i~~a~id~ 274 (298)
. ....| ..++-.++.
T Consensus 178 -~-~~~~~--dy~g~~ip~ 192 (225)
T 2jbh_A 178 -S-DGFRP--DYAGFEIPN 192 (225)
T ss_dssp -C-SCCCC--SEEEEEECS
T ss_pred -c-CCCCc--cEEEEECCC
Confidence 1 12234 466666654
No 23
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=98.77 E-value=2.9e-08 Score=86.78 Aligned_cols=133 Identities=14% Similarity=0.214 Sum_probs=88.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhccC-CccceEEE
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCKG-IKIGKILI 189 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p~-a~~g~i~i 189 (298)
-+..++.....+|+..+... .. + +..++|+|.| .+...+.+.+.- ...+.+..
T Consensus 37 ~~~~~i~~~~~~La~~i~~~----~~----------~---------~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~ 93 (205)
T 1yfz_A 37 ITEEQLKAKVKELGEMITRD----YE----------G---------KDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAV 93 (205)
T ss_dssp ECHHHHHHHHHHHHHHHHHH----TT----------T---------SCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHH----cC----------C---------CCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEE
Confidence 45566777777776665432 10 0 1356777777 455566666632 23355543
Q ss_pred EecCC----CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCc
Q 022342 190 HRDGD----NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSL 265 (298)
Q Consensus 190 ~R~~~----t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v 265 (298)
.+... ++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++..+++.+ + ...|
T Consensus 94 ~~y~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~-~-~~~~-- 167 (205)
T 1yfz_A 94 SSYGSSTKSSGIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKP--RSLKICTILDKPERRE-A-DVKV-- 167 (205)
T ss_dssp EECSHHHHHHCCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGGCC-S-CCCC--
T ss_pred EeccCCccccceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCC--CEEEEEEEEecCcccc-C-CCCC--
Confidence 33211 22222335667789999999999999999999999999999998 7899999999998842 2 2234
Q ss_pred EEEEEeecCC
Q 022342 266 KIVTSEIDVA 275 (298)
Q Consensus 266 ~i~~a~id~~ 275 (298)
..++..++..
T Consensus 168 d~~g~~~p~~ 177 (205)
T 1yfz_A 168 DYCGFKIPDK 177 (205)
T ss_dssp SEEEEECCSS
T ss_pred CEEEEEcCCc
Confidence 5677777653
No 24
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=98.77 E-value=3.9e-09 Score=97.64 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=58.2
Q ss_pred CCeEEEEeCCchhHHHhhhhccccc---------------CCCCHHH----HHHHHHhhhhhHHHhhcccccccceEEec
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVE---------------RGRDVDS----VLEQYAKFVKPAFDDFVLPSKKYADVIIP 61 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~e---------------rgr~~~~----v~~~~~~~~~p~~~~~i~P~~~~ADiii~ 61 (298)
+|++|||++|.++++.|+++||... +|.+.++ +..||...++|++++||+|++++||+||+
T Consensus 215 ~D~~i~V~~~~~~~~~R~~~R~~~~r~~~~r~~~~~~~~~~g~s~e~a~~~i~~q~~~~~~~~~~~~i~~~~~~AD~vI~ 294 (308)
T 1sq5_A 215 VDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILT 294 (308)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHHHTTTTCTTSTTHHHHTSCHHHHHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHHHhhccCCchhhhcccCCCHHHHHHHHHHHHHhccHHHHHHHcccccccCcEEEE
Confidence 6899999999999999999998532 3777776 56788888999999999999999999999
Q ss_pred CCCCCc
Q 022342 62 RGGDNH 67 (298)
Q Consensus 62 ~~~~~~ 67 (298)
+++++.
T Consensus 295 n~~~~~ 300 (308)
T 1sq5_A 295 KSANHA 300 (308)
T ss_dssp ECGGGC
T ss_pred eCCCCc
Confidence 876654
No 25
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=98.74 E-value=3.4e-08 Score=87.64 Aligned_cols=139 Identities=14% Similarity=0.180 Sum_probs=87.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccc-eeEeeehH---HHHHHHHHhcc--CC--ccc
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKK-LCGVSIVR---SMENALRACCK--GI--KIG 185 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~-i~~V~IlR---~m~~~~~~~~p--~a--~~g 185 (298)
.+..++....++|+..+..+.-..- . ....+ .++|+|+| .+...+.+.+. +. ..+
T Consensus 12 i~~~~i~~~~~~La~~I~~~~~~~~-----------~------~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~ 74 (220)
T 1tc1_A 12 FTEEEIRTRIKEVAKRIADDYKGKG-----------L------RPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRME 74 (220)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHTTSC-----------C------BTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEE
T ss_pred eCHHHHHHHHHHHHHHHHHHccCcc-----------c------ccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCcccc
Confidence 3456778888888877764421110 0 00123 67888888 33344444441 22 355
Q ss_pred eEEEEec--C--CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHh
Q 022342 186 KILIHRD--G--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKR 261 (298)
Q Consensus 186 ~i~i~R~--~--~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~ 261 (298)
.+.+.+. . .++.......++.+++|++|+|+||+++||+|+.++++.|++.|+ ++|.+++++..+++. ++ ..
T Consensus 75 ~l~~~~y~~~~~~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga--~~V~v~~l~~k~~~~-~~-~~ 150 (220)
T 1tc1_A 75 FICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRP--ASLKTVVLLDKREGR-RV-PF 150 (220)
T ss_dssp EEEEECC---------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECTTCC-SS-CC
T ss_pred EEEEeecCCCcccCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCccC-cC-CC
Confidence 6654332 1 122222234677789999999999999999999999999999998 789999999988873 22 13
Q ss_pred CCCcEEEEEeecCC
Q 022342 262 FPSLKIVTSEIDVA 275 (298)
Q Consensus 262 ~p~v~i~~a~id~~ 275 (298)
.| ..++-.++..
T Consensus 151 ~~--dy~g~~ip~~ 162 (220)
T 1tc1_A 151 SA--DYVVANIPNA 162 (220)
T ss_dssp CC--SEEEEECCSC
T ss_pred CC--CEEEEECCch
Confidence 34 5666666543
No 26
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=98.73 E-value=2.8e-08 Score=85.20 Aligned_cols=134 Identities=15% Similarity=0.116 Sum_probs=85.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhccC-CccceEEE
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCKG-IKIGKILI 189 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p~-a~~g~i~i 189 (298)
.+..++.....+|+..+..+. + + +..++|++.| .+...+.+.+.- ..++.+.+
T Consensus 15 ~~~~~i~~~~~~la~~i~~~~----~----------~---------~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~ 71 (183)
T 1hgx_A 15 YNQDDIQKRIRELAAELTEFY----E----------D---------KNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIIC 71 (183)
T ss_dssp ECHHHHHHHHHHHHHHHHHHH----T----------T---------TCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHc----C----------C---------CCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEE
Confidence 456677777777777665331 0 0 1356677777 445555555531 22344434
Q ss_pred Ee--cCC-CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcE
Q 022342 190 HR--DGD-NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLK 266 (298)
Q Consensus 190 ~R--~~~-t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~ 266 (298)
.+ .+. ++...+...++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..++|.+++. ..| .
T Consensus 72 ~~y~~~~~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga--~~v~~~~l~~~~~g~~~~~-~~~--d 146 (183)
T 1hgx_A 72 SSYSGTKSTGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKP--ASLKVCTLCDKDIGKKAYD-VPI--D 146 (183)
T ss_dssp EC---------CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECCSSCSSC-CCC--S
T ss_pred EecCCcccccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCC--CEEEEEEEEecCcccccCC-CCC--C
Confidence 21 111 12222234566789999999999999999999999999999998 6899999888777654432 234 5
Q ss_pred EEEEeecCC
Q 022342 267 IVTSEIDVA 275 (298)
Q Consensus 267 i~~a~id~~ 275 (298)
.++-.++..
T Consensus 147 ~~g~~~p~~ 155 (183)
T 1hgx_A 147 YCGFVVENR 155 (183)
T ss_dssp EEEEEECSS
T ss_pred EEEEEeCCe
Confidence 677777653
No 27
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=98.72 E-value=3.1e-08 Score=91.15 Aligned_cols=95 Identities=16% Similarity=0.212 Sum_probs=64.4
Q ss_pred ceeEeeehH---HHHHHHHHhccCCccceEEEEecCCCCceeEeccCCC-CCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 022342 161 KLCGVSIVR---SMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPN-DISERHVLLLDPVLATGNSANQAIQLLIEK 236 (298)
Q Consensus 161 ~i~~V~IlR---~m~~~~~~~~p~a~~g~i~i~R~~~t~~~~~y~klP~-~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~ 236 (298)
..++|++.+ .+...+.+.+ +++...+.-+|...+ ....+++. +++|++|+|+||+++||+|+.+|++.|+++
T Consensus 156 ~~vVv~pd~Gg~~~a~~la~~l-~~p~~~i~k~r~~~~---~~~~~l~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~ 231 (284)
T 1u9y_A 156 DPIVLAPDKGALEFAKTASKIL-NAEYDYLEKTRLSPT---EIQIAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQ 231 (284)
T ss_dssp SCEEEESSGGGHHHHHHHHHHH-TCCEEEBC-------------CCBSSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHT
T ss_pred CcEEEEEcCChHHHHHHHHHHh-CCCEEEEEEEEcCCC---eEEEEecCccCCCCEEEEEecccCchHHHHHHHHHHHHC
Confidence 456677666 2333443333 344443333332222 11234554 799999999999999999999999999999
Q ss_pred CCCCccEEEEEE--EeCHHHHHHHHHh
Q 022342 237 GVPESHIIFLNL--ISAPEGIHCVCKR 261 (298)
Q Consensus 237 g~~~~~I~vv~~--vas~~gl~~l~~~ 261 (298)
|+ ++|.+++. +.+.+|.+++.+.
T Consensus 232 Ga--~~V~~~~~h~v~s~~a~~~l~~~ 256 (284)
T 1u9y_A 232 GA--KKIIAACVHPVLIGDALNKLYSA 256 (284)
T ss_dssp TC--CSEEEEEEECCCCTTHHHHHHHH
T ss_pred CC--cEEEEEEEeEecCcHHHHHHHhC
Confidence 99 67888886 8899999999887
No 28
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=98.71 E-value=1.8e-08 Score=90.03 Aligned_cols=83 Identities=66% Similarity=1.081 Sum_probs=73.9
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+|++||+++|.++++.|+..||..+||++.+++.++|....++.|++|++|.++.||+||++.-+|...++.+.+.|.+.
T Consensus 151 ~d~vi~l~~~~e~~~~R~~~R~~~~rg~~~e~i~~~~~~~~~~~~~~~i~~~~~~ad~vI~~~id~~~s~e~v~~~I~~~ 230 (252)
T 1uj2_A 151 FQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDI 230 (252)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEETGGGCHHHHHHHHHHHHHH
T ss_pred cCeeEEEeCCHHHHHHHHHHHHHhhhCCCHHHHHHHHHHhccHHHHHHhhhhhhcCcEEEecCCCChhHHHHHHHHHHHH
Confidence 58999999999999999999998889999999999999989999999999999999999976555666788888888877
Q ss_pred ccc
Q 022342 81 LGQ 83 (298)
Q Consensus 81 l~~ 83 (298)
+.+
T Consensus 231 l~~ 233 (252)
T 1uj2_A 231 LNG 233 (252)
T ss_dssp HHC
T ss_pred Hcc
Confidence 654
No 29
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=98.70 E-value=1.5e-08 Score=94.19 Aligned_cols=68 Identities=13% Similarity=0.293 Sum_probs=58.8
Q ss_pred CCeEEEEeCCchhHHHhhhhccccc---------------CCCCHHHHH----HHHHhhhhhHHHhhcccccccceEEec
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVE---------------RGRDVDSVL----EQYAKFVKPAFDDFVLPSKKYADVIIP 61 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~e---------------rgr~~~~v~----~~~~~~~~p~~~~~i~P~~~~ADiii~ 61 (298)
+|++|||++|.++++.|++.|++.. +|.+.++++ .+|...++|++++||+|++++||+||+
T Consensus 218 ~D~~I~V~a~~~~~~~R~i~R~~~~rd~~~r~~~~~~~~~~g~s~e~a~~~v~~~~~~~~~p~~~~~i~p~~~~ADlii~ 297 (312)
T 3aez_A 218 FDFSLYVDARIEDIEQWYVSRFLAMRTTAFADPESHFHHYAAFSDSQAVVAAREIWRTINRPNLVENILPTRPRATLVLR 297 (312)
T ss_dssp CSEEEEEEECHHHHHHHHHHHHHHHTTTGGGSTTSTTGGGTTCCHHHHHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEE
T ss_pred cCcEEEEECCHHHHHHHHHHHHHHHHhccccCcchhhhcccCCCHHHHHHHHHHHHHhccHHHHHHhccCCCCCCeEEEe
Confidence 6899999999999999999986543 267777766 778889999999999999999999999
Q ss_pred CCCCCch
Q 022342 62 RGGDNHV 68 (298)
Q Consensus 62 ~~~~~~~ 68 (298)
++.++.+
T Consensus 298 ~~~~~~v 304 (312)
T 3aez_A 298 KDADHSI 304 (312)
T ss_dssp ECTTSCE
T ss_pred cCCCCce
Confidence 9877753
No 30
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=98.69 E-value=7.9e-08 Score=79.68 Aligned_cols=90 Identities=20% Similarity=0.233 Sum_probs=60.5
Q ss_pred eEeeehH---HHHHHHHHhccCCccceEEEEec--CCC-Cc-eeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHH
Q 022342 163 CGVSIVR---SMENALRACCKGIKIGKILIHRD--GDN-GK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIE 235 (298)
Q Consensus 163 ~~V~IlR---~m~~~~~~~~p~a~~g~i~i~R~--~~t-~~-~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~ 235 (298)
++|+|.| .+...+...+.--.++.+...+. ..+ .. ..+....+.+++|++|+|+||+++||+|+.++++.|++
T Consensus 29 ~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~ 108 (153)
T 1vdm_A 29 VIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERGEKPVITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKK 108 (153)
T ss_dssp EEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCCSSCEEEECCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHT
T ss_pred EEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcccccceeEeccCCcCCCCCEEEEEecccCChHHHHHHHHHHHH
Confidence 4456666 34555555553222333333221 111 11 22344556678999999999999999999999999999
Q ss_pred cCCCCccEEEEEEEeCHHH
Q 022342 236 KGVPESHIIFLNLISAPEG 254 (298)
Q Consensus 236 ~g~~~~~I~vv~~vas~~g 254 (298)
.|+ +.|.++++...+++
T Consensus 109 ~ga--~~v~~~~l~~~~~~ 125 (153)
T 1vdm_A 109 LGA--KEIKIACLAMKPWT 125 (153)
T ss_dssp TTB--SEEEEEEEEECTTC
T ss_pred cCC--CEEEEEEEEeCCCC
Confidence 998 68888888887765
No 31
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=98.68 E-value=4e-08 Score=86.50 Aligned_cols=139 Identities=12% Similarity=0.203 Sum_probs=88.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhc---c-CCccce
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACC---K-GIKIGK 186 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~---p-~a~~g~ 186 (298)
.+..+|.....+|+..+....-... +.+ .+..++|+|.| .+...+.+.+ . ....+.
T Consensus 28 ~~~~~i~~~~~~La~~i~~~~~~~~---------~~~--------~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~ 90 (211)
T 1pzm_A 28 VTQEQVWAATAKCAKKIAADYKDFH---------LTA--------DNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEF 90 (211)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHGGGT---------CBT--------TBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eCHHHHHHHHHHHHHHHHHhccccc---------ccC--------CCCCEEEEEccchHHHHHHHHHHHhhcCCCceeee
Confidence 5677888888888887765431111 000 12467788888 3444444444 2 123555
Q ss_pred EEE--EecC--CCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhC
Q 022342 187 ILI--HRDG--DNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRF 262 (298)
Q Consensus 187 i~i--~R~~--~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~ 262 (298)
+.. +++. .++.......++.+++|++|+|+||+++||+|+.++++.|+++|+ ++|.+++++..+++ .++ ...
T Consensus 91 i~~~~y~~~~~~~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga--~~V~v~~l~~k~~~-~~~-~~~ 166 (211)
T 1pzm_A 91 ICASSYGSGVETSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKP--ASLKTVVLLDKPSG-RKV-DVL 166 (211)
T ss_dssp EBCC-------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCC--SEEEEEEEEECGGG-CSS-CCC
T ss_pred EEeeeccCccccCCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCC--CEEEEEEEEecCcc-CcC-CCC
Confidence 543 2321 122211234566789999999999999999999999999999998 78999999999887 222 133
Q ss_pred CCcEEEEEeecCC
Q 022342 263 PSLKIVTSEIDVA 275 (298)
Q Consensus 263 p~v~i~~a~id~~ 275 (298)
| ..++..++..
T Consensus 167 ~--d~~g~~ip~~ 177 (211)
T 1pzm_A 167 V--DYPVITIPRA 177 (211)
T ss_dssp C--SEEEEECCSC
T ss_pred C--CEEEEECCCC
Confidence 4 5677666554
No 32
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=98.66 E-value=3.9e-08 Score=92.09 Aligned_cols=70 Identities=20% Similarity=0.250 Sum_probs=60.8
Q ss_pred CCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE--EeCHHHHHHHHHhCCCcEEEEEeecCC
Q 022342 204 LPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNL--ISAPEGIHCVCKRFPSLKIVTSEIDVA 275 (298)
Q Consensus 204 lP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~--vas~~gl~~l~~~~p~v~i~~a~id~~ 275 (298)
+..+++||+|+|+|||++||+|+.+|++.|+++|+ ++|.+++. +.+++|++++.+...+--++|.+++..
T Consensus 207 l~g~v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga--~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~t~tip~~ 278 (326)
T 3s5j_B 207 LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGA--TRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQE 278 (326)
T ss_dssp EESCCTTSEEEEEEEEESSCHHHHHHHHHHHHTTC--SEEEEEEEEECCCTTHHHHHHHSCCSEEEEETTSCCH
T ss_pred ccccCCCCEEEEEccccCCcHHHHHHHHHHHHcCC--CEEEEEEEecccCchHHHHHhhCCCCEEEEecCCCCh
Confidence 56689999999999999999999999999999999 67888884 789999999988766667778777653
No 33
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=98.64 E-value=6.9e-09 Score=91.16 Aligned_cols=76 Identities=9% Similarity=0.169 Sum_probs=62.9
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEe--CHHHHHHHHHh-CCCcEEEEE-eecCCCCCCCce
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLIS--APEGIHCVCKR-FPSLKIVTS-EIDVALNEEFRV 282 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~va--s~~gl~~l~~~-~p~v~i~~a-~id~~l~~~~~i 282 (298)
.++|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++. +++|.+++.+. +|.+.+++. .+++.+++.+||
T Consensus 114 ~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga--~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~i~~~l~~~~~i 191 (211)
T 2aee_A 114 VLKGQKMVIIEDLISTGGSVLDAAAAASREGA--DVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYI 191 (211)
T ss_dssp CCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--EEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHHHHHHHHHHTSS
T ss_pred CCCcCEEEEEeecccchHHHHHHHHHHHHCCC--cEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999998 5676777666 78999999765 676666665 577788887877
Q ss_pred eC
Q 022342 283 IP 284 (298)
Q Consensus 283 vP 284 (298)
.+
T Consensus 192 ~~ 193 (211)
T 2aee_A 192 TN 193 (211)
T ss_dssp CH
T ss_pred CH
Confidence 53
No 34
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=98.64 E-value=2.7e-08 Score=88.88 Aligned_cols=132 Identities=12% Similarity=0.074 Sum_probs=84.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc----------
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK---------- 180 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p---------- 180 (298)
.+..++....++|+..+..+. +. +..++|+|+| .+...+.+.+.
T Consensus 50 ~~~~~i~~~~~~La~~i~~~~----~~-------------------~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~ 106 (233)
T 1fsg_A 50 LPGGLVKDRVEKLAYDIHRTY----FG-------------------EELHIICILKGSRGFFNLLIDYLATIQKYSGRES 106 (233)
T ss_dssp ECHHHHHHHHHHHHHHHHHHH----TT-------------------SCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCC
T ss_pred eCHHHHHHHHHHHHHHHHHHc----CC-------------------CCCEEEEEccCCHHHHHHHHHHhCCccccccccc
Confidence 566678888888887776442 00 1345677777 22233332222
Q ss_pred ---CCccceEEEE--ecCCC-CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022342 181 ---GIKIGKILIH--RDGDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 254 (298)
Q Consensus 181 ---~a~~g~i~i~--R~~~t-~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~g 254 (298)
...++.+... +++.+ +...+....+.+++|++|+|+||+++||+|+.++++.|+++|+ +.|.+++++..+++
T Consensus 107 ~~~P~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga--~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 107 SVPPFFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGP--KSMRIATLVEKRTD 184 (233)
T ss_dssp SSCSCEEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEEECCT
T ss_pred CCCCcEEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCC--CEEEEEEEEECCcc
Confidence 1336666643 33222 2222223345678999999999999999999999999999998 68999999987776
Q ss_pred HHHHHHhCCCcEEEEEeecC
Q 022342 255 IHCVCKRFPSLKIVTSEIDV 274 (298)
Q Consensus 255 l~~l~~~~p~v~i~~a~id~ 274 (298)
- ++ ...| ..++-.++.
T Consensus 185 ~-~~-~~~~--dy~g~~ip~ 200 (233)
T 1fsg_A 185 R-SN-SLKG--DFVGFSIED 200 (233)
T ss_dssp T-CC-SCBC--SEEEEEECS
T ss_pred c-cC-CCCc--cEEEEEcCC
Confidence 2 21 1234 456656643
No 35
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=98.63 E-value=6.4e-08 Score=90.43 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=68.2
Q ss_pred cceeEeeehH---HHHHHHHHhccCCccceEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHc
Q 022342 160 KKLCGVSIVR---SMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEK 236 (298)
Q Consensus 160 ~~i~~V~IlR---~m~~~~~~~~p~a~~g~i~i~R~~~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~ 236 (298)
++.++|++.. .....+.+.+ +++...+.-+|... +.. .-..++.+++|++|+|+|||++||+|+.+|++.|+++
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L-~~p~~~i~K~r~~~-~~v-~~~~i~g~v~gk~viiVDDii~TG~Tl~~a~~~L~~~ 242 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQL-NCDLAIIDKRRPKA-NVA-EVMNIIGEVEGRTCVIMDDMVDTAGTLCKAAQVLKER 242 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHT-TCEEEC----------------------CCSEEEEEEEEESSCHHHHHHHHHHHHT
T ss_pred CCcEEEEeCCCccHHHHHHHHHh-CCCEEEEEEEeccC-Cce-EEEEccccCCCCEEEEEecccCchHHHHHHHHHHHHc
Confidence 3566666665 2223333333 34444443333221 111 1134567899999999999999999999999999999
Q ss_pred CCCCccEEEEE--EEeCHHHHHHHHHhCCCcEEEEEeecC
Q 022342 237 GVPESHIIFLN--LISAPEGIHCVCKRFPSLKIVTSEIDV 274 (298)
Q Consensus 237 g~~~~~I~vv~--~vas~~gl~~l~~~~p~v~i~~a~id~ 274 (298)
|+ ++|.+++ .+.+++|++++.+...+--++|..|+.
T Consensus 243 Ga--~~v~~~~tH~v~s~~a~~~l~~~~i~~vv~t~tip~ 280 (319)
T 3dah_A 243 GA--KQVFAYATHPVLSGGAADRIAASALDELVVTDTIPL 280 (319)
T ss_dssp TC--SCEEEEEEEECCCTTHHHHHHTSSCSEEEEESSSCC
T ss_pred CC--CEEEEEEEeecCChHHHHHHHhCCCCEEEEeccccC
Confidence 99 6788888 477999999998765566677777765
No 36
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=98.63 E-value=1.4e-07 Score=82.34 Aligned_cols=142 Identities=21% Similarity=0.279 Sum_probs=85.5
Q ss_pred CChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc---C--Cccc
Q 022342 114 ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK---G--IKIG 185 (298)
Q Consensus 114 T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p---~--a~~g 185 (298)
-+..+|....++|+..+.+..-...|- |. ..++.++|+|.+ .+...+.+.+. + .+.+
T Consensus 17 ~~~~~i~~~i~~La~~i~~~~~~~~~~---------~~------~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~ 81 (201)
T 1w30_A 17 MSAANVGRTISRIAHQIIEKTALDDPV---------GP------DAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHG 81 (201)
T ss_dssp ECHHHHHHHHHHHHHHHHHHTTTTSCC---------BT------TBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred eCHHHHHHHHHHHHHHHHHHccccccc---------cc------cCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccc
Confidence 356788888888888877653221111 10 013577888888 23333433332 1 2344
Q ss_pred eEEE--EecCCCC--c-eeEeccCCC-CCCCcEEEEEcCcccchHHHHHHHHHHHHcC-CCCccEEEEEEEeCHHHHHHH
Q 022342 186 KILI--HRDGDNG--K-QLIYEKLPN-DISERHVLLLDPVLATGNSANQAIQLLIEKG-VPESHIIFLNLISAPEGIHCV 258 (298)
Q Consensus 186 ~i~i--~R~~~t~--~-~~~y~klP~-~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g-~~~~~I~vv~~vas~~gl~~l 258 (298)
.+.. +|+..+. . ...+..+|. +++|++|+|+||+++||+|+.++++.|++.| + +.|.+++++..+..
T Consensus 82 ~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a--~~V~vavlv~k~~~---- 155 (201)
T 1w30_A 82 ALDITLYRDDLMIKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRP--RAVQLAVLVDRGHR---- 155 (201)
T ss_dssp ECCCGGGCC--------CCCCCBCCTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECCCC----
T ss_pred eEEEEEecCCccccccceeecccCCCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCC--cEEEEEEEEecCCC----
Confidence 4332 3433221 1 233445664 4899999999999999999999999999999 7 68888888876421
Q ss_pred HHhCC-CcEEEEEeecCCCCC
Q 022342 259 CKRFP-SLKIVTSEIDVALNE 278 (298)
Q Consensus 259 ~~~~p-~v~i~~a~id~~l~~ 278 (298)
..| ....+.-.++...++
T Consensus 156 --~~pi~~dy~g~~ip~~~~e 174 (201)
T 1w30_A 156 --ELPLRADYVGKNVPTSRSE 174 (201)
T ss_dssp --SSSBCCSEEEEECCCCTTC
T ss_pred --cCCCCCcEEEEECCCCCCC
Confidence 222 124566666554443
No 37
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=98.60 E-value=1.2e-07 Score=80.92 Aligned_cols=70 Identities=26% Similarity=0.454 Sum_probs=52.2
Q ss_pred eccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC-CCCccEEEEEEEeCHHHHHHHHHhCC-CcEEEEEeecCCCCC
Q 022342 201 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG-VPESHIIFLNLISAPEGIHCVCKRFP-SLKIVTSEIDVALNE 278 (298)
Q Consensus 201 y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g-~~~~~I~vv~~vas~~gl~~l~~~~p-~v~i~~a~id~~l~~ 278 (298)
...++.+++|++|+|+||+++||+|+.++++.|++.| + +.|.+++++..+ + +..| ....+.-.++...++
T Consensus 89 ~~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a--~~V~~~~l~~k~-~-----~~~~~~~dy~g~~ip~~~~e 160 (181)
T 1a3c_A 89 GADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRP--SSIQLAVLVDRG-H-----RELPIRADYIGKNIPTSKSE 160 (181)
T ss_dssp EEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECC-C-----CSSSCCCSEEEEECCCCSSC
T ss_pred ccccCcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCC--cEEEEEEEEccC-C-----CcCCCCccEEEEECCCCccc
Confidence 3456778999999999999999999999999999997 8 688888888655 2 1122 124556666654443
No 38
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=98.58 E-value=4.2e-08 Score=85.01 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=55.0
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPR 62 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~ 62 (298)
+|++||||+|.++|+.|.+.|+. +||++.+++.++|.....|.+ +|++|++++||+||+.
T Consensus 148 ~d~~i~vd~~~~~~~~R~~~R~~-~~g~t~~~~~~~~~~~~~~~~-~~i~~~~~~aD~vi~~ 207 (208)
T 3c8u_A 148 WDVSIRLEVPMADLEARLVQRWL-DHGLNHDAAVARAQGNDLANA-RAIEAARLPADLTWPQ 207 (208)
T ss_dssp CSEEEEECCCHHHHHHHHHHHHH-HTTCCHHHHHHHHHTHHHHHH-HHHHTTBCCCSEEEC-
T ss_pred cCEEEEEeCCHHHHHHHHHHHHH-hcCCCHHHHHHHHHhccHHHH-HHHHhCCCCCCEEeeC
Confidence 58999999999999999999975 799999999999998889977 8999999999999975
No 39
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.54 E-value=2.4e-07 Score=79.09 Aligned_cols=70 Identities=24% Similarity=0.376 Sum_probs=52.9
Q ss_pred ccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcC-CCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCC
Q 022342 202 EKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG-VPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNE 278 (298)
Q Consensus 202 ~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g-~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~ 278 (298)
..++.+++|++|+|+||+++||+|+.++++.|+++| + +.|.+++++..+. +-....| ..++..++...++
T Consensus 88 ~~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a--~~V~~~~l~~~~~---~~~~~~~--d~~g~~i~~~~~~ 158 (181)
T 1ufr_A 88 TRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRP--RRIYLAVLVDRGH---RELPIRA--DFVGKNVPTSRSE 158 (181)
T ss_dssp EEECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCC--SEEEEEEEEECCC---CSSSBCC--SEEEEECCCCTTC
T ss_pred cccCcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCC--cEEEEEEEEcCCC---CcCCccC--cEEEEeCCCCccC
Confidence 446677899999999999999999999999999999 7 6888888887761 1111234 4666666665554
No 40
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=98.50 E-value=1.2e-07 Score=90.59 Aligned_cols=69 Identities=17% Similarity=0.225 Sum_probs=58.7
Q ss_pred CCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE--EEeCHHHHHHHHHhCCCcEEEEEeecC
Q 022342 204 LPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN--LISAPEGIHCVCKRFPSLKIVTSEIDV 274 (298)
Q Consensus 204 lP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~--~vas~~gl~~l~~~~p~v~i~~a~id~ 274 (298)
++.+++|++|||+|||++||+|+.+|++.|+++|+ ++|.+++ .+.+.++.+++.+..-+--++|..++.
T Consensus 266 l~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga--~~v~~~~tH~v~s~~a~~~l~~s~id~vvvTntip~ 336 (379)
T 2ji4_A 266 VVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGA--YKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPH 336 (379)
T ss_dssp EESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTC--CEEEEEEEEECCCTTHHHHHHHSSCCEEEEESSSCC
T ss_pred cccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCC--CEEEEEEEeecCCcHHHHHHHhCCCCEEEEecCCCC
Confidence 45679999999999999999999999999999999 6788777 588999999998765555667766644
No 41
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=98.33 E-value=1.1e-06 Score=80.81 Aligned_cols=69 Identities=20% Similarity=0.291 Sum_probs=54.3
Q ss_pred CCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE--EeCHHHHHHHHHhCCCcEEEEEeecCC
Q 022342 204 LPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNL--ISAPEGIHCVCKRFPSLKIVTSEIDVA 275 (298)
Q Consensus 204 lP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~--vas~~gl~~l~~~~p~v~i~~a~id~~ 275 (298)
...+++|++|+|+||+++||+|+.++++.|++.|+ +.+.+++. +.+.+|.+++ +..-+--++|-.++..
T Consensus 197 ~~~dv~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga--~~v~~~~th~v~s~~a~~~l-~s~i~~vv~Tntip~~ 267 (286)
T 3lrt_A 197 PNVDVNGKKLLIVDDIISTGGTIAKSSGLLREKGA--SKIYVSAVHGLFVNGSENKI-LQNADEIHVTDTVESK 267 (286)
T ss_dssp SCCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--SEEEEEEEEECCCTTHHHHH-TTTCSEEEEESSSCST
T ss_pred ccccCCcCEEEEEeccccccHHHHHHHHHHHhCCC--CEEEEEEEEeecCchHHHHH-HcCCCEEEEecCCCCC
Confidence 45578999999999999999999999999999999 67877775 5689999999 4322223555555543
No 42
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=98.28 E-value=2.1e-06 Score=73.86 Aligned_cols=113 Identities=17% Similarity=0.217 Sum_probs=75.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHhCCCCCeeEEEeCCCCcceeeeeeccceeEeeehH---HHHHHHHHhcc-CCccceEEEE
Q 022342 115 SKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVR---SMENALRACCK-GIKIGKILIH 190 (298)
Q Consensus 115 ~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~tp~g~~~~g~~~~~~i~~V~IlR---~m~~~~~~~~p-~a~~g~i~i~ 190 (298)
+..+-++.++||+.-+.+.- .| +++++|.|++ .+..-+.+.+. ...+.++.+.
T Consensus 15 s~~~I~~~i~rlA~eI~e~~-------------------~~----~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~s 71 (181)
T 3acd_A 15 SAEAIKKRVEELGGEIARDY-------------------QG----KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS 71 (181)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-------------------TT----CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHh-------------------CC----CCcEEEEEecCcHHHHHHHHHhcCCCccccceEEE
Confidence 44567777777777665421 11 2467788898 23333333332 4455666665
Q ss_pred ecCC----CCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH
Q 022342 191 RDGD----NGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP 252 (298)
Q Consensus 191 R~~~----t~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~ 252 (298)
+... ++.......++.+++||+|+|+|+++.||.|+.++++.|+++|+ ++|.+++++--+
T Consensus 72 sy~~~~~~~g~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p--~sv~~avLl~K~ 135 (181)
T 3acd_A 72 SYGNAFKSSGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKP--ASVRVAALLSKP 135 (181)
T ss_dssp ------------CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCC--SEEEEEEEEECG
T ss_pred EecCCcCCCCceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCC--CEEEEEEEEEcC
Confidence 5432 23333445678889999999999999999999999999999998 689999988754
No 43
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=98.28 E-value=2.5e-07 Score=85.17 Aligned_cols=63 Identities=13% Similarity=0.224 Sum_probs=51.5
Q ss_pred CeEEEEeCCchhHHHh-hhhc--c-cccC--CCCHHHHHHHHHhhhhhHHHhhcccccc------cceEEecCCCC
Q 022342 2 NMKIFVDTDADVRLAR-RIRR--D-TVER--GRDVDSVLEQYAKFVKPAFDDFVLPSKK------YADVIIPRGGD 65 (298)
Q Consensus 2 d~kifvd~d~d~rl~R-ri~R--D-~~er--gr~~~~v~~~~~~~~~p~~~~~i~P~~~------~ADiii~~~~~ 65 (298)
|++||||+|.+.++.| |++| | ..+| |++.+++ .+|.+.++|+|+.|++|.++ .||+|+.-+.+
T Consensus 204 d~~I~vd~~~~~~i~rWRi~re~~l~~~r~~g~s~e~v-~~~~~~~~p~y~~~~~~~~~~~~~~~~adlvl~~~~~ 278 (290)
T 1odf_A 204 SLGIVFTTDNINNVYGWRLQQEHELISKVGKGMTDEQV-HAFVDRYMPSYKLYLNDFVRSESLGSIATLTLGIDSN 278 (290)
T ss_dssp EEEEEEEESCTTHHHHHHHHHHHHHHHHHSCSCCHHHH-HHHHHTTHHHHHHHHHHHHHHTCSSSSEEEEEEECTT
T ss_pred cceEEEECCCHHHHHHHHHHHHHHHHHhccCCCCHHHH-HHHHHHhcchHHHHhHHHHHhccCCCCCCEEEEECCC
Confidence 4559999999999998 9999 7 4456 9999997 67888899999999887543 69999976544
No 44
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=98.20 E-value=7.1e-06 Score=72.58 Aligned_cols=49 Identities=22% Similarity=0.286 Sum_probs=41.8
Q ss_pred CCCCCCCcEEEEEcCcccchHHHHHHHHHHHH--------cCCC-------CccEEEEEEEeCH
Q 022342 204 LPNDISERHVLLLDPVLATGNSANQAIQLLIE--------KGVP-------ESHIIFLNLISAP 252 (298)
Q Consensus 204 lP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~--------~g~~-------~~~I~vv~~vas~ 252 (298)
++.+++|++|||+||+++||+|+.+|++.|++ +|+. +.+|.+++++--+
T Consensus 97 ~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~ 160 (221)
T 2xbu_A 97 CKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQ 160 (221)
T ss_dssp HTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEEC
T ss_pred ccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEecc
Confidence 46789999999999999999999999999997 7873 3578888887643
No 45
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=98.13 E-value=5.3e-07 Score=85.41 Aligned_cols=58 Identities=14% Similarity=0.033 Sum_probs=54.7
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCC--CHHHHHHHHHhhhhhHHHhhcccccccceEEecC
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPR 62 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr--~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~ 62 (298)
++||||+|.++++.|.+.||+ ++|+ +.++++++|....+|.. +||+|++.+||+|+.-
T Consensus 291 ~~i~Vdad~ev~~~Rli~R~~-~~Gl~~s~eea~~r~~~~d~pN~-~~I~~~~~~ad~i~~~ 350 (359)
T 2ga8_A 291 LVYKIDIDYEATEERVAKRHL-QSGLVTTIAEGREKFRSNDLLNG-RDIDNHLIKVDNIVHI 350 (359)
T ss_dssp EEEEEECCHHHHHHHHHHHHH-HTTSCSSHHHHHHHHHHCTTTSS-HHHHHTBCCCTTEEEE
T ss_pred EEEEEECCHHHHHHHHHHhhh-ccCCCCCHHHHHHHHHhcCchhh-HhHhhcCCCCCEEEEe
Confidence 899999999999999999999 5899 99999999999999977 8999999999999854
No 46
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=98.08 E-value=5e-06 Score=71.73 Aligned_cols=52 Identities=25% Similarity=0.335 Sum_probs=45.5
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHHHh
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCKR 261 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~--~gl~~l~~~ 261 (298)
.+|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++.-+ +|.+++.+.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~~~~l~~~ 171 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGA--SIAGIGIVIEKSFQPGRDELVKL 171 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--EEEEEEEEEEETTSTHHHHHHHT
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCC--EEEEEEEEEEecccchhhhHHhc
Confidence 5799999999999999999999999999998 678888877654 788888764
No 47
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=98.07 E-value=5.7e-06 Score=71.17 Aligned_cols=60 Identities=20% Similarity=0.193 Sum_probs=48.2
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHHHhCCCcEEEEE
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCKRFPSLKIVTS 270 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~--~gl~~l~~~~p~v~i~~a 270 (298)
..+|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+ .|.+++.+. ++.+++.
T Consensus 123 ~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga--~~V~~~~l~~~~~~~~~~~l~~~--g~~v~sl 184 (190)
T 2dy0_A 123 IKPGDKVLVVDDLLATGGTIEATVKLIRRLGG--EVADAAFIINLFDLGGEQRLEKQ--GITSYSL 184 (190)
T ss_dssp CCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--EEEEEEEEEEEGGGCHHHHHHTT--TCEEEEE
T ss_pred cCCcCEEEEEEccccchHHHHHHHHHHHHcCC--EEEEEEEEEEccCcchHHHHhhC--CCcEEEE
Confidence 35799999999999999999999999999998 678788876655 488888542 4555543
No 48
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=98.01 E-value=6.5e-06 Score=69.99 Aligned_cols=51 Identities=24% Similarity=0.299 Sum_probs=44.1
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHH
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVC 259 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~--~gl~~l~ 259 (298)
.++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+ +|.+++.
T Consensus 117 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga--~~v~~~~l~~~~~~~~~~~l~ 169 (180)
T 1zn8_A 117 LEPGQRVVVVDDLLATGGTMNAACELLGRLQA--EVLECVSLVELTSLKGREKLA 169 (180)
T ss_dssp SCTTCEEEEEEEEESSSHHHHHHHHHHHHTTC--EEEEEEEEEEEGGGCHHHHHT
T ss_pred cCCCCEEEEEcCCcccHHHHHHHHHHHHHcCC--EEEEEEEEEEccCcchhhhhc
Confidence 36899999999999999999999999999998 678888876655 5788774
No 49
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=98.00 E-value=1.4e-05 Score=71.37 Aligned_cols=68 Identities=25% Similarity=0.374 Sum_probs=51.9
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHHHHh----CCCcEEEEEeecCCCC
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCVCKR----FPSLKIVTSEIDVALN 277 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~--~gl~~l~~~----~p~v~i~~a~id~~l~ 277 (298)
.+|++|+|+||+++||+|+.+|++.|++.|+ +.+.+++++.-. .|.+++.++ +.++.++....-..+.
T Consensus 136 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga--~~v~v~~l~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~~ 209 (236)
T 1qb7_A 136 GKGSRVVLIDDVLATGGTALSGLQLVEASDA--VVVEMVSILSIPFLKAAEKIHSTANSRYKDIKFISLLSDDALT 209 (236)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--EEEEEEEEEECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGCC
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCC--eEEEEEEEEEcccccHHHHHhhhcccccCCCcEEEEEEccccc
Confidence 4799999999999999999999999999998 677777877665 588888752 3344455544333444
No 50
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=97.97 E-value=1.3e-05 Score=68.24 Aligned_cols=61 Identities=21% Similarity=0.316 Sum_probs=47.9
Q ss_pred CCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeC-HHHHHHHHHhCCCcEEEEE
Q 022342 206 NDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA-PEGIHCVCKRFPSLKIVTS 270 (298)
Q Consensus 206 ~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas-~~gl~~l~~~~p~v~i~~a 270 (298)
.+++|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++.- ..|.+++.+. ++.+++.
T Consensus 102 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga--~~v~~~~l~~r~~~~~~~l~~~--g~~~~sl 163 (178)
T 2yzk_A 102 GDPPKGRVVVVDDVATTGTSIAKSIEVLRSNGY--TVGTALVLVDRGEGAGELLARM--GVRLVSV 163 (178)
T ss_dssp TCCCSSEEEEEEEEESSSHHHHHHHHHHHHTTC--EEEEEEEEEECCSSHHHHHHTT--TCEEEEE
T ss_pred ccCCCCEEEEEEeccCCcHHHHHHHHHHHHcCC--eEEEEEEEEEcCcCHHHHHHHc--CCcEEEE
Confidence 467899999999999999999999999999998 56767776653 3667777532 4556554
No 51
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=97.94 E-value=2.9e-05 Score=66.54 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=43.1
Q ss_pred CCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH--HHHHHH
Q 022342 206 NDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP--EGIHCV 258 (298)
Q Consensus 206 ~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~--~gl~~l 258 (298)
..++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++..+ +|-+++
T Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga--~~v~~~~l~~~~~~~g~~~l 170 (187)
T 1g2q_A 118 AIPAGSNVIIVDDIIATGGSAAAAGELVEQLEA--NLLEYNFVMELDFLKGRSKL 170 (187)
T ss_dssp SSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTC--EEEEEEEEEECCCSSCCCCC
T ss_pred cCCCcCEEEEECCCcccHHHHHHHHHHHHHcCC--eEEEEEEEEEccCcCchhhc
Confidence 357899999999999999999999999999998 678888887665 355554
No 52
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=97.94 E-value=1.5e-05 Score=68.30 Aligned_cols=50 Identities=36% Similarity=0.323 Sum_probs=44.2
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCc--cEEEEEEEeCH--HHHHHHH
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPES--HIIFLNLISAP--EGIHCVC 259 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~--~I~vv~~vas~--~gl~~l~ 259 (298)
++|++|+|+||+++||+|+.++++.|++.|+ + .+.+++++--+ .|-+++.
T Consensus 115 ~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga--~~~~V~~~~l~~k~~~~g~~~l~ 168 (186)
T 1l1q_A 115 GPHDVVLLHDDVLATGGTLLAAIELCETAGV--KPENIYINVLYEIEALKGREKVG 168 (186)
T ss_dssp CTTCCEEEEEEEESSSHHHHHHHHHHHHTTC--CGGGEEEEEEEECGGGCHHHHHT
T ss_pred CCcCEEEEEecccccHHHHHHHHHHHHHcCC--CcceEEEEEEEEccCccHHHHHh
Confidence 5899999999999999999999999999999 5 78888887776 4778774
No 53
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=97.90 E-value=2.5e-05 Score=70.15 Aligned_cols=53 Identities=13% Similarity=0.259 Sum_probs=45.2
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeC--HHHHHHHHHh
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA--PEGIHCVCKR 261 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas--~~gl~~l~~~ 261 (298)
.++|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++.- ..|.+++.+.
T Consensus 146 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga--~vv~v~~l~d~~~~~a~e~l~~~ 200 (243)
T 3dez_A 146 VTKGQKMVIIEDLISTGGSVLDAVAAAQREGA--DVLGVVAIFTYELPKATANFEKA 200 (243)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTC--EEEEEEEEEECCCHHHHHHHHHH
T ss_pred cCCCCEEEEEEeeccccHHHHHHHHHHHHCCC--EEEEEEEEEECCCchHHHHHHhc
Confidence 46799999999999999999999999999998 56777777664 6788888654
No 54
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=97.89 E-value=1.7e-05 Score=69.16 Aligned_cols=60 Identities=13% Similarity=0.267 Sum_probs=48.3
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH-HHHHHHHHhCCCcEEEEEe
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTSE 271 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~-~gl~~l~~~~p~v~i~~a~ 271 (298)
.+|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++... .|.+++.+. ++.+++..
T Consensus 109 ~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga--~~v~~~~l~~~~~~~~~~l~~~--g~~v~sl~ 169 (205)
T 2wns_A 109 NPGETCLIIEDVVTSGSSVLETVEVLQKEGL--KVTDAIVLLDREQGGKDKLQAH--GIRLHSVC 169 (205)
T ss_dssp CTTCBEEEEEEEESSSHHHHHHHHHHHHTTC--BCCEEEEEEECCSSHHHHHHTT--TCEEEEEE
T ss_pred CCCCEEEEEEEeccccHHHHHHHHHHHHCCC--EEEEEEEEEEcCcchHHHHHHc--CCeEEEEE
Confidence 3789999999999999999999999999998 678888887766 666777532 45565543
No 55
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=97.87 E-value=2.9e-05 Score=69.38 Aligned_cols=60 Identities=15% Similarity=0.242 Sum_probs=48.3
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeC--HHHHHHHHHhCCCcEEEEE
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA--PEGIHCVCKRFPSLKIVTS 270 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas--~~gl~~l~~~~p~v~i~~a 270 (298)
..+|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++.- +.|.+++.+. ++.+++.
T Consensus 134 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga--~vv~v~~l~~~~~~~~~e~l~~~--gi~v~sL 195 (234)
T 3m3h_A 134 AEKGQKVVVVEDLISTGGSAITCVEALREAGC--EVLGIVSIFTYELEAGKEKLEAA--NVASYSL 195 (234)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTC--EEEEEEEEEECCCHHHHHHHHHT--TCCEEES
T ss_pred cCCCCEEEEEecccchhHHHHHHHHHHHHCCC--EEEEEEEEEECcCchHHHHHHhc--CCCEEEE
Confidence 35799999999999999999999999999998 56777777664 6778888653 4555553
No 56
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=97.85 E-value=2.2e-05 Score=67.03 Aligned_cols=59 Identities=19% Similarity=0.260 Sum_probs=45.3
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH-HHHHHHHHhCCCcEEEEE
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTS 270 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~-~gl~~l~~~~p~v~i~~a 270 (298)
++|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++--+ .|.+++.+ + ++.+++.
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga--~~v~~~~l~~~~~~g~~~l~~-~-g~~~~sl 171 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGA--EVVGVATVVDRATGAADVIAA-E-GLEYRYI 171 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTC--EEEEEEEEEC-CCCHHHHHHT-T-TCCEEEE
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCC--eEEEEEEEEEcCcchHHHHHh-c-CCeEEEE
Confidence 6899999999999999999999999999998 677777776544 45666643 2 3445443
No 57
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=97.84 E-value=9.1e-06 Score=68.63 Aligned_cols=45 Identities=16% Similarity=0.302 Sum_probs=40.2
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 254 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~g 254 (298)
++|++|+|+||+++||+|+.++++.|++.|+ +.|.+++++-.+++
T Consensus 118 v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga--~~V~~~~l~~~~~~ 162 (175)
T 1vch_A 118 LLNQRVVLVSDVVASGETMRAMEKMVLRAGG--HVVARLAVFRQGTP 162 (175)
T ss_dssp HTTCEEEEEEEEESSSHHHHHHHHHHHHTTC--EEEEEEEEEECSCC
T ss_pred cCCCEEEEEeccccchHHHHHHHHHHHHcCC--eEEEEEEEEecCCC
Confidence 4899999999999999999999999999998 67888888776654
No 58
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=97.80 E-value=2.7e-05 Score=68.42 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=52.2
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCC--CHHHHHHHHHhhhhhHHHhhcccccccce-EEecCCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGG 64 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr--~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~ 64 (298)
+|++||+++|.++++.|++.|+ .+||+ +.+++.+.+.+...+.++.+++|....+| ++|++++
T Consensus 153 ~d~vi~L~a~~e~~~~R~~~~~-~~R~~~~~~e~~~~~i~~R~~~~~~~~~~p~~~~~d~~vId~~~ 218 (236)
T 1q3t_A 153 AELKIFLVASVDERAERRYKEN-IAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTG 218 (236)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHTTCSSSCCSCCTTCEEEECSS
T ss_pred CCEEEEEECCHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHhhhhhhcccccccccCCEEEEcCCC
Confidence 4789999999999999987775 35765 88889999887677888888999988877 9998753
No 59
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=97.68 E-value=9.7e-06 Score=72.27 Aligned_cols=104 Identities=10% Similarity=0.042 Sum_probs=63.0
Q ss_pred ceeEeeehH---HHHHHHHHhcc-CCccceEEE--EecCCC-CceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHH
Q 022342 161 KLCGVSIVR---SMENALRACCK-GIKIGKILI--HRDGDN-GKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLL 233 (298)
Q Consensus 161 ~i~~V~IlR---~m~~~~~~~~p-~a~~g~i~i--~R~~~t-~~~~~y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L 233 (298)
++++|.++| .+...+.+.+. ...++++.+ |++..+ +...+-..++.+++||+|+|+||++.||.|+.++++.|
T Consensus 62 ~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~y~~~~s~~v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L 141 (230)
T 1dqn_A 62 PVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSSYKGTRQESVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQI 141 (230)
T ss_dssp CEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEEEECSSCEEEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHS
T ss_pred CcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEEeCCCccCceEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHh
Confidence 567788888 33344444442 112333333 333322 21221234455789999999999999999999999999
Q ss_pred HHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcE-EEEEe
Q 022342 234 IEKGVPESHIIFLNLISAPEGIHCVCKRFPSLK-IVTSE 271 (298)
Q Consensus 234 ~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~-i~~a~ 271 (298)
++ |.+++++..+..+.+-..-.||.+ .++-.
T Consensus 142 ~~-------V~vavLl~k~~~~~r~~~i~~D~~~yvg~~ 173 (230)
T 1dqn_A 142 KH-------AKICSCFVKDVDAIKKHSALADTKMFYGYT 173 (230)
T ss_dssp TT-------CEEEEEEESCHHHHHTSTTTTTCCEEEEEC
T ss_pred hc-------CEEEEEEECCccccccCCcCCCCceEEEEE
Confidence 86 777888888764333323334422 44444
No 60
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=97.63 E-value=4.9e-05 Score=67.22 Aligned_cols=45 Identities=13% Similarity=0.335 Sum_probs=39.0
Q ss_pred CCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH
Q 022342 206 NDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP 252 (298)
Q Consensus 206 ~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~ 252 (298)
..++|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++--+
T Consensus 121 ~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga--~~v~v~~l~dr~ 165 (226)
T 2ps1_A 121 SALENKRILIIDDVMTAGTAINEAFEIISNAKG--QVVGSIIALDRQ 165 (226)
T ss_dssp SCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTC--EEEEEEEEEECC
T ss_pred CCCCcCEEEEEEecccChHHHHHHHHHHHHcCC--eEEEEEEEEEcc
Confidence 357899999999999999999999999999998 567777776544
No 61
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=97.57 E-value=6.4e-05 Score=67.04 Aligned_cols=44 Identities=20% Similarity=0.262 Sum_probs=38.0
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP 252 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~ 252 (298)
.++|++|+|+||+++||+|+.++++.|++.|+ +-+-+++++--+
T Consensus 133 ~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga--~vv~v~vlvdr~ 176 (232)
T 3mjd_A 133 DMTNKKVLLIDDVMTAGTAFYESYNKLKIINA--KIAGVVLSIDRQ 176 (232)
T ss_dssp CCTTCEEEEECSCCSSSHHHHHHHHHHHTTTC--EEEEEEEEEECC
T ss_pred CCCCCEEEEEEeeccccHHHHHHHHHHHHCCC--EEEEEEEEEECC
Confidence 56899999999999999999999999999998 456667776644
No 62
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=97.52 E-value=0.00022 Score=63.79 Aligned_cols=60 Identities=18% Similarity=0.340 Sum_probs=46.3
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH-------HHHHHHHHhCCCcEEEEE
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP-------EGIHCVCKRFPSLKIVTS 270 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~-------~gl~~l~~~~p~v~i~~a 270 (298)
.++| +|+|+||+++||+|+.++++.|++.|+ +-+-+++++--+ .|++++.+.+ ++.+++.
T Consensus 140 ~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga--~vv~v~vlvdr~egG~~~l~a~~~~~~~~-Gv~v~SL 206 (238)
T 3n2l_A 140 KLEG-RVMLVDDVITAGTAIRESMELIQANKA--DLAGVLVAIDRQEKGKGELSAIQEVERDF-GCAVISI 206 (238)
T ss_dssp CCCS-EEEEECSCCSSSHHHHHHHHHHHHTTC--EEEEEEEEEECCCBCSSSSBHHHHHHHHH-CCEEEEE
T ss_pred ccCC-cEEEEeeeecccHHHHHHHHHHHHcCC--EEEEEEEEEEcccCccchhhHHHHHHHHc-CCCEEEE
Confidence 4679 999999999999999999999999998 445566666643 3677775544 5666654
No 63
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=97.51 E-value=8.6e-05 Score=65.07 Aligned_cols=43 Identities=16% Similarity=0.370 Sum_probs=37.6
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP 252 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~ 252 (298)
.++| +|+|+||+++||+|+.++++.|++.|+ +.+.+++++--+
T Consensus 115 ~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga--~~v~v~~l~dr~ 157 (213)
T 1lh0_A 115 ALQG-RVMLVDDVITAGTAIRESMEIIQAHGA--TLAGVLISLDRQ 157 (213)
T ss_dssp CCCS-EEEEECSCCSSSCHHHHHHHHHHHTTC--EEEEEEEEEECC
T ss_pred CCCC-CEEEEEecccchHHHHHHHHHHHHCCC--eEEEEEEEEEcc
Confidence 4679 999999999999999999999999998 567777777554
No 64
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=97.49 E-value=0.00011 Score=63.46 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=39.8
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCC--CHHHHHHHHHhhhhhHHHhhccccccc-ceEEecCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKY-ADVIIPRG 63 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr--~~~~v~~~~~~~~~p~~~~~i~P~~~~-ADiii~~~ 63 (298)
.|++||++++.++++.|+..+ ..+||+ +.+++.+++.+..++.|..+.+|.+.+ ++++|++.
T Consensus 141 ~d~~i~l~~~~e~~~~R~~~~-l~~rg~~~~~~~~~~~i~~R~~~~~~~~~~pl~~~~~~~~Id~~ 205 (227)
T 1cke_A 141 APVKIFLDASSEERAHRRMLQ-LQVKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDST 205 (227)
T ss_dssp CSEEEEEECCHHHHHHHHHHH-HHHHTCCCCHHHHHHHHC-------------CCCCTTCEEEETT
T ss_pred CCEEEEEeCCHHHHHHHHHHH-HHhCCccCCHHHHHHHHHHHHHhhhhhcccCccCCCCEEEEeCC
Confidence 478999999999999997654 446787 888999988887778888888998876 45889875
No 65
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=97.40 E-value=0.00017 Score=64.23 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=50.0
Q ss_pred CeEEEEeCCchhHHHhhhhccccc-CCCCHHHHHHHHHhhhhhHHHhhcccccccce-EEecCCCCC-chhHHHHHHHHh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVE-RGRDVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDN-HVAIDLIVQHIH 78 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~e-rgr~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~-~~~~~~i~~~i~ 78 (298)
|++||++++.++|..||..+.... .+.+.+++.+++.+.-+.....++.|.+++|| ++|++++.+ ...++.|.+.++
T Consensus 164 ~~~ifl~A~~e~r~~R~~~~l~~~~~~~~~~~~~~~i~~rd~~~~~r~~~pl~~~~d~~~Idts~~~~eev~~~I~~~i~ 243 (252)
T 4e22_A 164 PVKIFLDASSQERAHRRMLQLQERGFNVNFERLLAEIQERDNRDRNRSVAPLVPAADALVLDSTSMSIEQVIEQALAYAQ 243 (252)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHHTCCCCHHHHHHHHC------------CCCCCTTEEEEECSSSCHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhhccccchhccCCeEEEECcCCCHHHHHHHHHHHHH
Confidence 789999999999999998643322 25688999998888777788899999999999 999885533 233455555555
Q ss_pred hhc
Q 022342 79 TKL 81 (298)
Q Consensus 79 ~~l 81 (298)
..+
T Consensus 244 ~~~ 246 (252)
T 4e22_A 244 RIL 246 (252)
T ss_dssp HHC
T ss_pred HHh
Confidence 443
No 66
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=97.38 E-value=8.2e-05 Score=68.43 Aligned_cols=45 Identities=24% Similarity=0.241 Sum_probs=39.8
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHH
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEG 254 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~g 254 (298)
.+|++|+|+||+++||+|+.++++.|++.|+ +.+.+++++..+++
T Consensus 194 ~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA--~vV~v~vlvdr~~~ 238 (291)
T 1o57_A 194 KTGSNVLIIDDFMKAGGTINGMINLLDEFNA--NVAGIGVLVEAEGV 238 (291)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHTGGGTC--EEEEEEEEEEESSC
T ss_pred CCcCEEEEEEEEcCcHHHHHHHHHHHHHCCC--EEEEEEEEEEcCcc
Confidence 5799999999999999999999999999999 56777777776665
No 67
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=97.35 E-value=0.00036 Score=59.91 Aligned_cols=76 Identities=17% Similarity=0.308 Sum_probs=55.6
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCC--CHHHHHHHHHhhhhhHHHhhcccccccce-EEecCCCCCchhHHHHHHHH
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr--~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~~~~~~~i~~~i 77 (298)
.|++||+++|.++++.|++.|+ ..||+ +.+++.+.+.....+.....+.|....|| ++|++++. .++.+.+.|
T Consensus 136 ~~~vi~l~a~~e~~~~R~~~~~-~~r~~~~~~e~~~~~~~~r~~~d~~r~~~~~~~~~d~~~Id~~~~---~~ee~~~~I 211 (219)
T 2h92_A 136 ADLKVYMIASVEERAERRYKDN-QLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGK---SIEEVTDEI 211 (219)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHHHCSSSCSCCCTTCEEEECTTC---CHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHH-HhcCcccCHHHHHHHHHHHHHhhhhhhccccccCCCeEEEECCCC---CHHHHHHHH
Confidence 3789999999999999987763 35777 88888888876556778888889877787 99987532 234444444
Q ss_pred hhh
Q 022342 78 HTK 80 (298)
Q Consensus 78 ~~~ 80 (298)
.+.
T Consensus 212 ~~~ 214 (219)
T 2h92_A 212 LAM 214 (219)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 68
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=97.31 E-value=0.0003 Score=59.91 Aligned_cols=71 Identities=17% Similarity=0.239 Sum_probs=48.2
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+|..||+++|.++++.|...|| |++.+++.+.+.. ..|..+ ..+.||++|++.+...++++.+.+.|.+.
T Consensus 124 ~d~vi~l~~~~e~~~~Rl~~R~----~~~~e~~~~r~~~-q~~~~~-----~~~~ad~vIdn~~~~~~~~~~~~~~i~~~ 193 (206)
T 1jjv_A 124 CDRILVVDVSPQTQLARSAQRD----NNNFEQIQRIMNS-QVSQQE-----RLKWADDVINNDAELAQNLPHLQQKVLEL 193 (206)
T ss_dssp CSEEEEEECCHHHHHHHHC---------CHHHHHHHHHH-SCCHHH-----HHHHCSEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHh-cCChHH-----HHHhCCEEEECCCCccccHHHHHHHHHHH
Confidence 4889999999999999999886 7788888887765 334333 33579999998664454455666666655
Q ss_pred c
Q 022342 81 L 81 (298)
Q Consensus 81 l 81 (298)
+
T Consensus 194 ~ 194 (206)
T 1jjv_A 194 H 194 (206)
T ss_dssp H
T ss_pred H
Confidence 4
No 69
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=97.31 E-value=0.00044 Score=61.54 Aligned_cols=77 Identities=18% Similarity=0.251 Sum_probs=60.7
Q ss_pred CeEEEEeCCchhHHHhhhhccccc-CCCCHHHHHHHHHhhhhhHHHhhcccccccce-EEecCCCCCchhHHHHHHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVE-RGRDVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDNHVAIDLIVQHIHT 79 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~e-rgr~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~~~~~~~i~~~i~~ 79 (298)
++|||+++|.+.|..||..+-... .+.+.+++..+..+.-+.....|+.|.+.++| ++|+.+.- .++.+++.|.+
T Consensus 147 ~lkifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~pl~~~~dal~IDTs~l---~iee~v~~I~~ 223 (233)
T 3r20_A 147 DVKIFLTASAEERARRRNAQNVANGLPDDYATVLADVQRRDHLDSTRPVSPLRAADDALVVDTSDM---DQAQVIAHLLD 223 (233)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHSCSSCCSCCTTSEEEECTTS---CHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhhhccccccccccCcEEEECCCC---CHHHHHHHHHH
Confidence 699999999999999998764432 46789999999988888888899999999999 99987443 34455555544
Q ss_pred hc
Q 022342 80 KL 81 (298)
Q Consensus 80 ~l 81 (298)
.+
T Consensus 224 ~i 225 (233)
T 3r20_A 224 LV 225 (233)
T ss_dssp HC
T ss_pred HH
Confidence 43
No 70
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=97.21 E-value=0.00025 Score=58.70 Aligned_cols=40 Identities=15% Similarity=0.343 Sum_probs=33.9
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHH
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPE 253 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~ 253 (298)
+++|++|+|+||+++||+|+.+|++.|++ +.+++++--+.
T Consensus 78 ~~~gk~VliVDDii~TG~Tl~~a~~~l~~-------v~~a~L~~k~~ 117 (152)
T 1nul_A 78 EGDGEGFIVIDDLVDTGGTAVAIREMYPK-------AHFVTIFAKPA 117 (152)
T ss_dssp SSCCTTEEEEEEEECTTSSHHHHHHHCTT-------SEEEEEEECGG
T ss_pred CCCcCEEEEEEeecCchHHHHHHHHHHhh-------CCEEEEEECCC
Confidence 47899999999999999999999999975 55677766554
No 71
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=97.19 E-value=0.00042 Score=56.31 Aligned_cols=73 Identities=14% Similarity=0.139 Sum_probs=48.6
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (298)
++.||+++|.++++.|...|+..+++.+.+++.+.+....+.. ..++...||++|++.+.-....+.+.+.+.
T Consensus 103 ~~~i~l~~~~~~~~~R~~~R~~~~~~~~~~~~~~r~~~~~~~~----~~~~~~~ad~vId~~~~~~~~~~~i~~~l~ 175 (179)
T 3lw7_A 103 VYIVAVHSPPKIRYKRMIERLRSDDSKEISELIRRDREELKLG----IGEVIAMADYIITNDSNYEEFKRRCEEVTD 175 (179)
T ss_dssp EEEEEEECCHHHHHHHHHTCC----CCCHHHHHHHHHHHHHHT----HHHHHHTCSEEEECCSCHHHHHHHHHHHHH
T ss_pred cEEEEEECCHHHHHHHHHhccCCCCcchHHHHHHHHHhhhccC----hHhHHHhCCEEEECCCCHHHHHHHHHHHHH
Confidence 4789999999999999999987777889999988875433222 345567899999975432223344444443
No 72
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=97.19 E-value=0.00025 Score=69.84 Aligned_cols=43 Identities=21% Similarity=0.433 Sum_probs=37.9
Q ss_pred CCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE
Q 022342 204 LPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNL 248 (298)
Q Consensus 204 lP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~ 248 (298)
++.+++||+|+|+||++.||+|+.++++.|++.|+ +.|.++++
T Consensus 353 ~~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga--~~V~~~~l 395 (504)
T 1ecf_A 353 NRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGA--KKVYLASA 395 (504)
T ss_dssp CGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTC--SSEEEEES
T ss_pred ccccCCCCeEEEEeccccccHHHHHHHHHHHhcCC--cEEEEEEE
Confidence 35578999999999999999999999999999999 56777664
No 73
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=97.15 E-value=0.00058 Score=61.89 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=43.4
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGG 64 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~ 64 (298)
+|+.|||++|.++++.|...|| |++.+++.+.|... .+. ..++ ..||++|++..
T Consensus 200 ~d~vI~l~a~~ev~~~Rl~~R~----g~s~e~~~~ri~~q-~~~-~~~~----~~AD~vIdn~~ 253 (281)
T 2f6r_A 200 VHEVWTVVIPETEAVRRIVERD----GLSEAAAQSRLQSQ-MSG-QQLV----EQSNVVLSTLW 253 (281)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----CCCHHHHHHHHHTS-CCH-HHHH----HTCSEEEECSS
T ss_pred CCEEEEEcCCHHHHHHHHHHcC----CCCHHHHHHHHHHc-CCh-HhhH----hhCCEEEECCC
Confidence 4899999999999999999997 78999998888774 443 3333 46999998754
No 74
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=97.11 E-value=0.00035 Score=67.98 Aligned_cols=40 Identities=15% Similarity=0.375 Sum_probs=36.1
Q ss_pred CCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022342 206 NDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 247 (298)
Q Consensus 206 ~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~ 247 (298)
.+++||+|+|+||++.||+|+.++++.|++.|+ +.|.+++
T Consensus 334 ~~v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga--~~V~~~~ 373 (459)
T 1ao0_A 334 GVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGA--TEVHVKI 373 (459)
T ss_dssp HHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTC--SEEEEEE
T ss_pred ccCCCCeEEEEeeeecCHHHHHHHHHHHHHcCC--CEEEEEE
Confidence 457899999999999999999999999999999 5677666
No 75
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=96.92 E-value=0.0016 Score=57.12 Aligned_cols=53 Identities=23% Similarity=0.248 Sum_probs=44.6
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRG 63 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~ 63 (298)
+|..|||++|.++|+.|-+.|| |.+.+++.+.+.. ..|.. +.++.||+||+|+
T Consensus 132 ~D~vi~V~ap~e~r~~Rl~~Rd----g~s~eea~~ri~~-Q~~~e-----ek~~~AD~VIdN~ 184 (210)
T 4i1u_A 132 CDRVLVVDCPVDTQIARVMQRN----GFTREQVEAIIAR-QATRE-----ARLAAADDVIVND 184 (210)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----CCCHHHHHHHHHH-SCCHH-----HHHHTCSEEEECS
T ss_pred CCeEEEEECCHHHHHHHHHhcC----CCCHHHHHHHHHH-cCChH-----HHHHhCCEEEECC
Confidence 6899999999999999999998 8999999988766 44543 3348999999985
No 76
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=96.89 E-value=0.0004 Score=59.28 Aligned_cols=72 Identities=11% Similarity=0.074 Sum_probs=50.8
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEE--ecCCCCCchhHHHHHHHHh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVI--IPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADii--i~~~~~~~~~~~~i~~~i~ 78 (298)
+|..+|+++|.++++.|+..|. ++.+.+.+.|.+++++.|..+.+-.++.||.+ |+++. .++.+.+.|.
T Consensus 130 ~d~~i~l~~~~~~~~~R~~~R~-----~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Id~~~----~~eev~~~I~ 200 (207)
T 2qt1_A 130 WNRSYFLTIPYEECKRRRSTRV-----YQPPDSPGYFDGHVWPMYLKYRQEMQDITWEVVYLDGTK----SEEDLFLQVY 200 (207)
T ss_dssp CSEEEEEECCHHHHHHHHHHSC-----CSSCCCTTHHHHTHHHHHHHHHHHGGGCSSCCEEEETTS----CHHHHHHHHH
T ss_pred cCeeEEEECCHHHHHHHHHHcC-----CCccchHHHHHHHHhHHHHHHHHHHHhcCCeEEEecCCC----CHHHHHHHHH
Confidence 4889999999999999887664 34444455666678899888887777888866 77643 3445555554
Q ss_pred hhc
Q 022342 79 TKL 81 (298)
Q Consensus 79 ~~l 81 (298)
+.+
T Consensus 201 ~~l 203 (207)
T 2qt1_A 201 EDL 203 (207)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 77
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=96.74 E-value=0.0024 Score=53.84 Aligned_cols=56 Identities=20% Similarity=0.324 Sum_probs=40.3
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccce-EEecCCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYAD-VIIPRGG 64 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~ 64 (298)
.|++||+++|.++++.|+..|+. .+.+++.+.+.+ +.+.|..+- +..|| ++|++++
T Consensus 136 ~d~~i~l~a~~e~~~~R~~~r~~----~~~~~~~~~~~~-R~~~~~~~~---~~~ad~~~Id~~~ 192 (208)
T 3ake_A 136 AAHKFYLTASPEVRAWRRARERP----QAYEEVLRDLLR-RDERDKAQS---APAPDALVLDTGG 192 (208)
T ss_dssp CSEEEEEECCHHHHHHHHHHTSS----SCHHHHHHHHHH-HHHTC--CC---CCCTTCEEEETTT
T ss_pred CcEEEEEECCHHHHHHHHHhhcc----cCHHHHHHHHHH-HHHHHhhcc---cCCCCEEEEECCC
Confidence 47899999999999999988853 566777776664 444443333 56788 9998754
No 78
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=96.71 E-value=0.0014 Score=63.85 Aligned_cols=59 Identities=17% Similarity=0.264 Sum_probs=44.4
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH-HHHHHHHHhCCCcEEEEE
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP-EGIHCVCKRFPSLKIVTS 270 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~-~gl~~l~~~~p~v~i~~a 270 (298)
.+|++|+|+||+++||+|+.++++.|++.|+ +.+-+++++--. .|.+++.+. ++.++..
T Consensus 363 ~~G~~VliVDDvitTG~T~~~~~~~l~~~g~--~vv~v~~lvdr~~~g~~~l~~~--g~~v~sL 422 (453)
T 3qw4_B 363 KKGDRVVIIDDLVSTGETKVEAIEKLRSAGL--EVVSIVVLVDRDMGAKAFLNKL--GYDFEAV 422 (453)
T ss_dssp CTTCEEEEEEEEECC-CCHHHHHHHHHTTTC--EEEEEEEEEECSSSHHHHHHHT--TCCEEEE
T ss_pred CCCCEEEEEeeeechhHHHHHHHHHHHHcCC--EEEEEEEEEECCcchHHHHHhc--CCCEEEE
Confidence 4799999999999999999999999999998 566677777654 455666542 3444443
No 79
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=96.56 E-value=0.0031 Score=52.87 Aligned_cols=72 Identities=15% Similarity=0.376 Sum_probs=50.4
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHH-HHHHhhhhhHHHhhccccc-ccceEEecCCCCCchhHHHHHHHHh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVL-EQYAKFVKPAFDDFVLPSK-KYADVIIPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~-~~~~~~~~p~~~~~i~P~~-~~ADiii~~~~~~~~~~~~i~~~i~ 78 (298)
.|+.||+++|.++++.|-.. |||+.+... .+|.+.++..|..+.++++ ..+|++|++.+ .++.+.+.|.
T Consensus 125 ~d~vi~L~~~~e~~~~Rl~~-----R~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Id~~~----~~~~v~~~I~ 195 (205)
T 2jaq_A 125 FDIVIYLRVSTKTAISRIKK-----RGRSEELLIGEEYWETLNKNYEEFYKQNVYDFPFFVVDAEL----DVKTQIELIM 195 (205)
T ss_dssp CSEEEEEECCHHHHHHHHHH-----HTCHHHHHSCHHHHHHHHHHHHHHHHHHTTTSCEEEEETTS----CHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHH-----cCChhhhcCcHHHHHHHHHHHHHHHHHccccCcEEEEECCC----CHHHHHHHHH
Confidence 36899999999999877433 577776542 2566667888888777776 78999998754 3445555554
Q ss_pred hhc
Q 022342 79 TKL 81 (298)
Q Consensus 79 ~~l 81 (298)
+.+
T Consensus 196 ~~l 198 (205)
T 2jaq_A 196 NKL 198 (205)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 80
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=96.54 E-value=0.0016 Score=56.79 Aligned_cols=59 Identities=15% Similarity=0.332 Sum_probs=41.9
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHH-HHHHhhhhhHHHhhcccc--cccce-EEecCCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVL-EQYAKFVKPAFDDFVLPS--KKYAD-VIIPRGG 64 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~-~~~~~~~~p~~~~~i~P~--~~~AD-iii~~~~ 64 (298)
.|+.||+|+|.++++.|-..| ||+.+... .+|++.++..|.++.+-+ +..++ ++|++..
T Consensus 147 pD~vi~Ld~~~e~~~~Ri~~R-----~r~~e~~~~~~~~~rv~~~~~~~~~~~~~~~~~~~~vId~~~ 209 (230)
T 2vp4_A 147 ADLIIYLRTSPEVAYERIRQR-----ARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADL 209 (230)
T ss_dssp CSEEEEEECCHHHHHHHHHHH-----CCGGGTTCCHHHHHHHHHHHHHHHTSCCSSCCCEEEEEECCC
T ss_pred CCEEEEEeCCHHHHHHHHHHc-----CCcccccCcHHHHHHHHHHHHHHHHHhcccCCCCEEEEECCC
Confidence 489999999999999996655 45433321 257777999999987543 34454 8888744
No 81
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=96.33 E-value=0.0069 Score=51.87 Aligned_cols=70 Identities=19% Similarity=0.165 Sum_probs=47.9
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+|+.||+++|.++++.|...|+ |.+.+++.+.+.. ..+.++ | ...||++|++.+.-....+.|.+.+...
T Consensus 126 ~d~vi~l~~~~e~~~~Rl~~R~----~~~~~~~~~~~~~-~~~~~~-~----~~~ad~vId~~~~~~~~~~~I~~~l~~~ 195 (218)
T 1vht_A 126 ANRVLVVDVSPETQLKRTMQRD----DVTREHVEQILAA-QATREA-R----LAVADDVIDNNGAPDAIASDVARLHAHY 195 (218)
T ss_dssp CSEEEEEECCHHHHHHHHHHHH----TCCHHHHHHHHHH-SCCHHH-H----HHHCSEEEECSSCTTSHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHh-cCChHH-H----HHhCCEEEECCCCHHHHHHHHHHHHHHH
Confidence 4789999999999999988875 5677776666554 444433 2 3568999998664444445555555443
No 82
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=96.33 E-value=0.0049 Score=52.84 Aligned_cols=42 Identities=10% Similarity=-0.020 Sum_probs=32.8
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGG 64 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~ 64 (298)
+|..|||++|.++|+.|.+ -.| +..|.++.+++||+||+|++
T Consensus 130 ~d~vi~v~a~~e~r~~Rli--------------~~q--------~~~~~~~~~~~AD~vI~n~~ 171 (192)
T 2grj_A 130 CDHVITVVASRETILKRNR--------------EAD--------RRLKFQEDIVPQGIVVANNS 171 (192)
T ss_dssp CSEEEEEECCHHHHHHHCS--------------SHH--------HHHTTCTTCCCCSEEEECSS
T ss_pred CCEEEEEECCHHHHHHHHH--------------Hhc--------CCchhhhHHhcCCEEEECCC
Confidence 5889999999999999981 112 23367788999999999754
No 83
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=96.32 E-value=0.0048 Score=52.15 Aligned_cols=67 Identities=24% Similarity=0.340 Sum_probs=46.3
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+|..||+++|.++++.|...| |.+.+++.+.+.. ..|. .+.++.||++|++.. .++.+.+.|.+.
T Consensus 124 ~~~~i~l~~~~e~~~~Rl~~R-----~~~~~~~~~~~~~-~~~~-----~~~~~~ad~vId~~~----~~~~~~~~i~~~ 188 (204)
T 2if2_A 124 YDKLIVVYAPYEVCKERAIKR-----GMSEEDFERRWKK-QMPI-----EEKVKYADYVIDNSG----SIEETYKQVKKV 188 (204)
T ss_dssp SSEEEEECCCHHHHHHHHHHT-----CCCHHHHHHHHTT-SCCH-----HHHGGGCSEECCCSS----CHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHc-----CCCHHHHHHHHHh-CCCh-----hHHHhcCCEEEECCC----CHHHHHHHHHHH
Confidence 478999999999999998865 6787777776665 3343 234567899998742 345555555554
Q ss_pred cc
Q 022342 81 LG 82 (298)
Q Consensus 81 l~ 82 (298)
+.
T Consensus 189 l~ 190 (204)
T 2if2_A 189 YE 190 (204)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 84
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=96.13 E-value=0.0057 Score=51.28 Aligned_cols=66 Identities=17% Similarity=0.288 Sum_probs=44.1
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+|+.||+++|.++++.|...|+ |.+.+++...+.+ ..+.+ +....||++|+++. .++.+.+.|.+.
T Consensus 125 ~d~~i~l~~~~e~~~~R~~~R~----~~~~~~~~~~i~~-~~~~~-----~~~~~ad~vId~~~----~~~~~~~~i~~~ 190 (203)
T 1uf9_A 125 LHGTLLVAAPLEERVRRVMARS----GLSREEVLARERA-QMPEE-----EKRKRATWVLENTG----SLEDLERALKAV 190 (203)
T ss_dssp SSEEEEECCCHHHHHHHHHTTT----CCTTHHHHHHHTT-SCCHH-----HHHHHCSEEECCSS----HHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHcC----CCCHHHHHHHHHH-CCChh-----HHHHhCCEEEECCC----CHHHHHHHHHHH
Confidence 3789999999999999998875 5566666665554 44433 22467899998754 344444444443
No 85
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=95.71 E-value=0.012 Score=51.37 Aligned_cols=76 Identities=12% Similarity=0.231 Sum_probs=51.4
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHH-HHHHHhhhhhHHHhhcccc---------cccceEEecCCCC---Cc
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSV-LEQYAKFVKPAFDDFVLPS---------KKYADVIIPRGGD---NH 67 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v-~~~~~~~~~p~~~~~i~P~---------~~~ADiii~~~~~---~~ 67 (298)
.|+.||+++|.++++.|-..| ||..+.. -.+|++.++..|+.|.++. .....++|++..+ +.
T Consensus 150 pd~~i~l~~~~~~~~~R~~~R-----~r~~e~~~~~~~~~~v~~~y~~~~~~~~~p~~~~~~~~~~~~~Id~~~~~~~v~ 224 (241)
T 2ocp_A 150 LHGFIYLQASPQVCLKRLYQR-----AREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEV 224 (241)
T ss_dssp CCEEEEEECCHHHHHHHHHHS-----CCTTTTTCCHHHHHHHHHHHHHHHTSCCSCCCCTTGGGCCEEEEECCSCTTTCH
T ss_pred CCEEEEEECCHHHHHHHHHhc-----CCcccccCCHHHHHHHHHHHHHHHhhccccccccccCCCCEEEEECCCChhhCH
Confidence 388999999999999885544 4444332 2356677999999998763 3345677776553 23
Q ss_pred hhHHHHHHHHhhhc
Q 022342 68 VAIDLIVQHIHTKL 81 (298)
Q Consensus 68 ~~~~~i~~~i~~~l 81 (298)
..+..+++.|.+.+
T Consensus 225 ~~i~~i~~~i~~~l 238 (241)
T 2ocp_A 225 TKQEDLMREVNTFV 238 (241)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35677777776654
No 86
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=95.50 E-value=0.0098 Score=48.40 Aligned_cols=71 Identities=23% Similarity=0.320 Sum_probs=42.0
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCC---CHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHH
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGR---DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr---~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (298)
.|+.||+++|.++++.|-..|+ .|.. ..+.+.+.|.. ..| .+++ ||++| ++. ..++.+.+.|
T Consensus 93 ~~~~i~l~~~~e~~~~R~~~r~--~r~~~~~~~~~i~~~~~~-~~~-------~~~~-~~~~i-~~~---~~~~~~~~~i 157 (168)
T 2pt5_A 93 RGTTVFIDIPFEVFLERCKDSK--ERPLLKRPLDEIKNLFEE-RRK-------IYSK-ADIKV-KGE---KPPEEVVKEI 157 (168)
T ss_dssp TSEEEEEECCHHHHHHHCBCTT--CCBGGGSCGGGTHHHHHH-HHH-------HHTT-SSEEE-ECS---SCHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHhCCC--CCCCCcchHHHHHHHHHH-HHH-------HHHh-CCEEE-CCC---CCHHHHHHHH
Confidence 3789999999999998877764 2211 12333344432 222 2244 99999 542 2355666666
Q ss_pred hhhcccccc
Q 022342 78 HTKLGQHDL 86 (298)
Q Consensus 78 ~~~l~~~~l 86 (298)
.+.+.+.++
T Consensus 158 ~~~l~~~~~ 166 (168)
T 2pt5_A 158 LLSLEGNAL 166 (168)
T ss_dssp HHHHHTSCC
T ss_pred HHHHHhccC
Confidence 666655544
No 87
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=94.98 E-value=0.042 Score=45.31 Aligned_cols=53 Identities=15% Similarity=0.305 Sum_probs=33.3
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCC
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRG 63 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~ 63 (298)
.|+.||+++|.++++.|...||.. +.+ ++.+.++..|+.+..-. .++++|++.
T Consensus 123 ~d~vi~l~~~~e~~~~Rl~~r~~~----~~~----~~~~~~~~~~~~~~~~~--~~~~~Id~~ 175 (195)
T 2pbr_A 123 PDITLLLDIPVDIALRRLKEKNRF----ENK----EFLEKVRKGFLELAKEE--ENVVVIDAS 175 (195)
T ss_dssp CSEEEEEECCHHHHHHHHHTTTCC----CCH----HHHHHHHHHHHHHHHHS--TTEEEEETT
T ss_pred CCEEEEEeCCHHHHHHHhhccCcc----chH----HHHHHHHHHHHHHHhhC--CCEEEEECC
Confidence 378999999999999887655432 222 23444555565554321 355999874
No 88
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=94.71 E-value=0.044 Score=46.01 Aligned_cols=46 Identities=24% Similarity=0.570 Sum_probs=33.2
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCC---CHHHH---HHHHHhhhhhHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGR---DVDSV---LEQYAKFVKPAFDDF 48 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr---~~~~v---~~~~~~~~~p~~~~~ 48 (298)
|+.||+++|.++++.|...|+.. +|+ +.+.+ +..|.+...|.++.|
T Consensus 122 ~~~i~l~~~~e~~~~Rl~~R~~~-~~~~~~~~e~~~~r~~~~~~~~~~~~~~~ 173 (203)
T 1ukz_A 122 KFILFFDCPEDIMLERLLERGKT-SGRSDDNIESIKKRFNTFKETSMPVIEYF 173 (203)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHH-HCCTTCSHHHHHHHHHHHHHTTHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHhcccc-CCCCCCCHHHHHHHHHHHHHhhHHHHHHH
Confidence 78999999999999998888642 233 35554 445666677777666
No 89
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=94.34 E-value=0.097 Score=43.02 Aligned_cols=72 Identities=17% Similarity=0.386 Sum_probs=45.7
Q ss_pred CeEEEEeCCchhHHHhhhhcccc-cCCC-C---HHHHHHHHHhhhhhHHHhhcccccccceE-EecCCCCCchhHHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTV-ERGR-D---VDSVLEQYAKFVKPAFDDFVLPSKKYADV-IIPRGGDNHVAIDLIVQ 75 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~-ergr-~---~~~v~~~~~~~~~p~~~~~i~P~~~~ADi-ii~~~~~~~~~~~~i~~ 75 (298)
|+.||+++|.++++.|...|+.. .|-. + +...+++|.+...|..+.|- +.+++ +|++.. .++.+.+
T Consensus 115 ~~~i~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~----~~~~~~~id~~~----~~~~v~~ 186 (196)
T 1tev_A 115 SFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYE----EMGKVKKIDASK----SVDEVFD 186 (196)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHTSSCCSCCHHHHHHHHHHHHHHHHHHHHHHH----HTTCEEEEETTS----CHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHcccccCCCCCCCHHHHHHHHHHHHHhHHHHHHHHH----hcCCEEEEECCC----CHHHHHH
Confidence 57899999999999999988753 2221 2 23456777777777655553 34665 787642 3444545
Q ss_pred HHhhhc
Q 022342 76 HIHTKL 81 (298)
Q Consensus 76 ~i~~~l 81 (298)
.|.+.+
T Consensus 187 ~i~~~l 192 (196)
T 1tev_A 187 EVVQIF 192 (196)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544443
No 90
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=94.30 E-value=0.094 Score=44.05 Aligned_cols=72 Identities=15% Similarity=0.111 Sum_probs=46.3
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
++.||+++|.++++.|-..|+.. ..+ +++++.+ +..+-.|....+|++|++.. .++.+.+.|.+.+
T Consensus 112 ~~vi~l~~~~e~~~~Rl~~R~~~--~~~-~~~~~~~-------~~~~~~~~~~~~~~~Id~~~----~~~e~~~~I~~~l 177 (202)
T 3t61_A 112 LAFVFLHGSESVLAERMHHRTGH--FMP-SSLLQTQ-------LETLEDPRGEVRTVAVDVAQ----PLAEIVREALAGL 177 (202)
T ss_dssp CEEEEEECCHHHHHHHHHHHHSS--CCC-HHHHHHH-------HHHCCCCTTSTTEEEEESSS----CHHHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHhhcc--CCC-HHHHHHH-------HHhcCCCCCCCCeEEEeCCC----CHHHHHHHHHHHH
Confidence 47899999999999998888642 223 4444433 33344566778999999853 3455555555555
Q ss_pred cccccc
Q 022342 82 GQHDLC 87 (298)
Q Consensus 82 ~~~~l~ 87 (298)
.+.++.
T Consensus 178 ~~~~~~ 183 (202)
T 3t61_A 178 ARLAEN 183 (202)
T ss_dssp HHHHHH
T ss_pred HHhhhc
Confidence 554443
No 91
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=94.28 E-value=0.15 Score=42.56 Aligned_cols=59 Identities=15% Similarity=0.370 Sum_probs=39.5
Q ss_pred CeEEEEeCCchhHHHhhh-hcccccC---CCC-------HHHHHHHHHhhhhhHHHhhcccccccceEEecCCC
Q 022342 2 NMKIFVDTDADVRLARRI-RRDTVER---GRD-------VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGG 64 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri-~RD~~er---gr~-------~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~ 64 (298)
|+.||+++|.++++.|-. .|+...| |.+ .+.. ..|.+.+++.|..+... +++++|++..
T Consensus 123 ~~vi~l~~~~e~~~~Rl~~~R~~~~~~~~g~~~~~~~d~~e~~-~~~~~r~~~~~~~~~~~---~~~~~Id~~~ 192 (213)
T 2plr_A 123 DITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGF-LKYQGLITEVYDKLVKD---ENFIVIDGTK 192 (213)
T ss_dssp SEEEEEECCHHHHHHHHHHTTCCCCTTTTTTTTCTTSCHHHHH-HHHHHHHHHHHHHHTTT---TTCEEEETTS
T ss_pred CEEEEEeCCHHHHHHHHhcccccccccccccccccccchhhhH-HHHHHHHHHHHHHHHhh---CCEEEEECCC
Confidence 789999999999888776 6752122 221 3333 45666677788877543 3789998743
No 92
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=94.27 E-value=0.031 Score=46.71 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=24.6
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (298)
..|||.+|+...|.+|+. +||++.++.+++.+...+.. ..+.. +..+|+||.|. +...+.+.+.+.|.
T Consensus 116 ~~i~i~~p~~~~l~~Rl~----~Rg~~~~~~i~~rl~~~~~~-~~~~~--~~~~d~vi~nd-~~~~a~~~l~~~i~ 183 (186)
T 3a00_A 116 RFLFIAPPSVEDLKKRLE----GRGTETEESINKRLSAAQAE-LAYAE--TGAHDKVIVND-DLDKAYKELKDFIF 183 (186)
T ss_dssp EEEEEECSCC----------------------------------------CCCCSEEEECS-SHHHHHHHHHHHHT
T ss_pred EEEEEECcCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHH-HHhhc--ccCCcEEEECc-CHHHHHHHHHHHHH
Confidence 469999999777777765 68888888887766655543 22222 57789999874 44455555555543
No 93
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=94.23 E-value=0.061 Score=43.42 Aligned_cols=70 Identities=9% Similarity=0.004 Sum_probs=41.1
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCC-chhHHHHHHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDN-HVAIDLIVQHIHT 79 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~-~~~~~~i~~~i~~ 79 (298)
|+.||+++|.++.+.|-..|. |..... .+.+.++..|+.....+. .++++|++.+.+ ....+.|.+.++.
T Consensus 96 ~~~i~l~~~~e~~~~R~~~r~---r~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~id~~~~~~~ev~~~I~~~~~~ 166 (173)
T 3kb2_A 96 AKVVYLHADPSVIKKRLRVRG---DEYIEG----KDIDSILELYREVMSNAG-LHTYSWDTGQWSSDEIAKDIIFLVEL 166 (173)
T ss_dssp EEEEEEECCHHHHHHHHHHHS---CSCCCH----HHHHHHHHHHHHHHHTCS-SCEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcC---Ccchhh----hHHHHHHHHHHHHHhhcC-CCEEEEECCCCCHHHHHHHHHHHHhC
Confidence 688999999999888876661 222222 233335555666544333 799999975422 2333444444443
No 94
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=94.08 E-value=0.05 Score=46.59 Aligned_cols=73 Identities=23% Similarity=0.331 Sum_probs=45.5
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHH---HHHhhhhhHHHhh--ccccc-ccceEEecCCCCC-chhHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLE---QYAKFVKPAFDDF--VLPSK-KYADVIIPRGGDN-HVAIDLIV 74 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~---~~~~~~~p~~~~~--i~P~~-~~ADiii~~~~~~-~~~~~~i~ 74 (298)
.++||+++|.+.|..|+..|+ |.+.+++.+ +-.+.+++-|..| +.|.. ..+|++|+.+.-. ..+++.|+
T Consensus 118 ~~~V~L~A~~e~r~~R~~~~~----~~~~~~~~~~i~~~d~~R~~~y~~~~~~~~~~~~~~dl~Idt~~l~~eevv~~I~ 193 (201)
T 3fdi_A 118 MISAFILGDKDTKTKRVMERE----GVDEKTALNMMKKMDKMRKVYHNFYCESKWGDSRTYDICIKIGKVDVDTATDMII 193 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHH----TCCHHHHHHHHHHHHHHHHHHHHHHCSSCTTBGGGCSEEEEESSSCHHHHHHHHH
T ss_pred eEEEEEECCHHHHHHHHHHHh----CCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCEEEECCCCCHHHHHHHHH
Confidence 379999999999999988763 556555433 3334456666665 34443 3489999985443 23334444
Q ss_pred HHHh
Q 022342 75 QHIH 78 (298)
Q Consensus 75 ~~i~ 78 (298)
+.++
T Consensus 194 ~~i~ 197 (201)
T 3fdi_A 194 KYID 197 (201)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 95
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=94.06 E-value=0.12 Score=43.75 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=39.1
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHH-HHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVL-EQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~-~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+.||+++++...+.+|+. .||++-++.+ +.+.+..++.... +...||++|.+. +...+.+.+.+.|+..
T Consensus 128 ~~i~l~~~s~e~l~~Rl~----~R~~~~~~~i~~rl~~~~~~~~~~----~~~~~d~vi~n~-~~e~~~~~i~~~i~~~ 197 (204)
T 2qor_A 128 IYIFVKPPSIDILLGRLK----NRNTEKPEEINKRMQELTREMDEA----DKVGFNYFIVND-DLARTYAELREYLLGS 197 (204)
T ss_dssp EEEEEECSCHHHHHHHHH----TCTTSCHHHHHHHHHHHHHHHHHH----HHHTCSEEEECS-SHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHh----hhccCcEEEECc-CHHHHHHHHHHHHHHH
Confidence 689999555555666663 4665444444 4444333333211 456789998874 3344556666666544
No 96
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=93.78 E-value=0.065 Score=44.38 Aligned_cols=67 Identities=13% Similarity=0.279 Sum_probs=38.1
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+++|.++++.|...||..+. + ++.+.++..|....... ....++|+++.. ++.+.+.|.+.+
T Consensus 123 d~vi~l~~~~e~~~~Rl~~R~~~~~----~----~~~~~~~~~~~~~~~~~-~~~~~~Id~~~~----~e~~~~~i~~~l 189 (197)
T 2z0h_A 123 DLTFYIDVDVETALKRKGELNRFEK----R----EFLERVREGYLVLAREH-PERIVVLDGKRS----IEEIHRDVVREV 189 (197)
T ss_dssp SEEEEEECCHHHHHHHC---CCCCC----H----HHHHHHHHHHHHHHHHC-TTTEEEEETTSC----HHHHHHHHHHHT
T ss_pred CEEEEEeCCHHHHHHHHhccCcccH----H----HHHHHHHHHHHHHHHhC-CCCEEEEeCCCC----HHHHHHHHHHHH
Confidence 7899999999999999888843222 2 34444555666554322 335677886433 444444444433
No 97
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=93.71 E-value=0.25 Score=41.40 Aligned_cols=72 Identities=19% Similarity=0.282 Sum_probs=42.3
Q ss_pred CeEEEEeCCchhHHHhhh-hccccc--CCCCHHH---HHHHHHhhhhhHHHhhcccccccceEEecCCCC-CchhHHHHH
Q 022342 2 NMKIFVDTDADVRLARRI-RRDTVE--RGRDVDS---VLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGD-NHVAIDLIV 74 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri-~RD~~e--rgr~~~~---v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~-~~~~~~~i~ 74 (298)
++.||+++|.++++.|-. .|.... .+.+.++ .+.++...+.|.|. . ||++|++.+. -...++.|.
T Consensus 119 ~~vi~L~~~~e~l~~Rl~~~~~~Rp~~~~~~~~~~~~~i~~~~~~r~~~y~-------~-ad~~Idt~~~s~ee~~~~I~ 190 (199)
T 3vaa_A 119 GKTVFLNVHPDVLFRRLRIAKQQRPILQGKEDDELMDFIIQALEKRAPFYT-------Q-AQYIFNADELEDRWQIESSV 190 (199)
T ss_dssp SEEEEEECCHHHHHHHHHHTGGGCGGGTTCCHHHHHHHHHHHHHHHHHHHT-------T-SSEEEECCCCSSHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHhcCCCCCCCcCCCChhhHHHHHHHHHHHHHHHHh-------h-CCEEEECCCCCHHHHHHHHH
Confidence 578999999999866544 221111 2444433 34443444555442 2 8999998663 345566677
Q ss_pred HHHhhhc
Q 022342 75 QHIHTKL 81 (298)
Q Consensus 75 ~~i~~~l 81 (298)
+.+...|
T Consensus 191 ~~l~~~l 197 (199)
T 3vaa_A 191 QRLQELL 197 (199)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 7766554
No 98
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=93.55 E-value=0.027 Score=52.77 Aligned_cols=47 Identities=9% Similarity=0.126 Sum_probs=39.6
Q ss_pred EEEe-CCch--hHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhccccccc
Q 022342 5 IFVD-TDAD--VRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKY 55 (298)
Q Consensus 5 ifvd-~d~d--~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ 55 (298)
+|++ +|.+ +|+.||+.| ..++|+ +++.+|++.+.|.|.++|+|.-.+
T Consensus 118 ~~~~~~d~~~~~Rlrrrl~r-~~~~G~---~~l~~~L~~vdP~~a~~I~p~d~~ 167 (340)
T 3d3q_A 118 FEDESISEDKMKQVKLKLKE-LEHLNN---NKLHEYLASFDKESAKDIHPNNRK 167 (340)
T ss_dssp CC---CCHHHHHHHHHHHHT-TSSSCH---HHHHHHHHHHCHHHHHHSCTTCHH
T ss_pred ccCCCCChHHHHHHHHHHHH-HHhcCH---HHHHHHHHhhCcHHHhhcCccCch
Confidence 6788 8888 899999999 999997 488999999999999999887543
No 99
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=93.50 E-value=0.071 Score=43.35 Aligned_cols=67 Identities=15% Similarity=0.286 Sum_probs=38.8
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCC--CHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGR--DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr--~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (298)
|+.||+++|.++++.|...|....|+. +.+.+.+.|.. +.|.| +++||++|++.+ .++.+.+.|.+
T Consensus 98 ~~vi~l~~~~e~~~~Rl~~r~~~~r~~~~~~~~~~~~~~~-r~~~~-------~~~a~~~Id~~~----~~e~~~~~I~~ 165 (168)
T 1zuh_A 98 GTTFYLKMDFETLIKRLNQKEREKRPLLNNLTQAKELFEK-RQALY-------EKNASFIIDARG----GLNNSLKQVLQ 165 (168)
T ss_dssp EEEEEEECCHHHHHHHHCC--------CCTTHHHHHHHHH-HHHHH-------HHTCSEEEEGGG----CHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHhccCCCCCCCccCHHHHHHHHHH-HHHHH-------HHHCCEEEECCC----CHHHHHHHHHH
Confidence 689999999999998877662111221 13444444443 44444 345899998744 34555555544
Q ss_pred h
Q 022342 80 K 80 (298)
Q Consensus 80 ~ 80 (298)
.
T Consensus 166 ~ 166 (168)
T 1zuh_A 166 F 166 (168)
T ss_dssp C
T ss_pred H
Confidence 3
No 100
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=93.39 E-value=0.15 Score=44.53 Aligned_cols=72 Identities=22% Similarity=0.182 Sum_probs=45.1
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHH---HHHHHhhhhhHHHhh--ccccc-ccceEEecCCCCCc-hhHHHHHH
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSV---LEQYAKFVKPAFDDF--VLPSK-KYADVIIPRGGDNH-VAIDLIVQ 75 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v---~~~~~~~~~p~~~~~--i~P~~-~~ADiii~~~~~~~-~~~~~i~~ 75 (298)
++||+++|.+.|..|...| .|++.++. +.+..+.++|-|..| +.|.. ..+|++|+.+.-.. .+++.|.+
T Consensus 139 ~~VfL~A~~e~r~~Ri~~~----~~~~~~~a~~~I~~~d~~R~~~Y~~ytg~~~~~~~~~dl~IdT~~l~~eevv~~I~~ 214 (223)
T 3hdt_A 139 IRIFVYTDKVKKVQRVMEV----DCIDEERAKRRIKKIEKERKEYYKYFTGSEWHSMKNYDLPINTTKLTLEETAELIKA 214 (223)
T ss_dssp EEEEEECCHHHHHHHHHHH----HTCCHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGCSEEEECTTCCHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcccCeEEEECCCCCHHHHHHHHHH
Confidence 7999999999999988765 35555444 344445567767655 23333 35999999754332 33344444
Q ss_pred HHh
Q 022342 76 HIH 78 (298)
Q Consensus 76 ~i~ 78 (298)
.++
T Consensus 215 ~i~ 217 (223)
T 3hdt_A 215 YIR 217 (223)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 101
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=93.30 E-value=0.14 Score=44.98 Aligned_cols=72 Identities=14% Similarity=0.231 Sum_probs=39.2
Q ss_pred CeEEEEeCCchhHHHhhhhccc-ccCCCCHHHHHHHHHhhhhhHHHhhcc-----cc----cccceEEecCCCCCchhHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDT-VERGRDVDSVLEQYAKFVKPAFDDFVL-----PS----KKYADVIIPRGGDNHVAID 71 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~-~ergr~~~~v~~~~~~~~~p~~~~~i~-----P~----~~~ADiii~~~~~~~~~~~ 71 (298)
|+.||+++|.++.+.|...|.- .+++.+ ..|.+.++..|+.|.+ |. .+...++|+....-....+
T Consensus 176 d~vi~L~~~~e~~~~Ri~~R~r~~~~~~~-----~~~~~~l~~~~~~~~~~~~v~~~y~~~~~~~~~~Id~~~~~eev~~ 250 (263)
T 1p5z_B 176 DGIIYLQATPETCLHRIYLRGRNEEQGIP-----LEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYE 250 (263)
T ss_dssp SEEEEEECCHHHHHHHHHHHCCGGGTTCC-----HHHHHHHHHHHHHHHTTCCCCCSCGGGGGSCEEEEECCSCHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHhcCCccccCcc-----HHHHHHHHHHHHHHHhhccchhhhhhhccCCEEEEECCCCHHHHHH
Confidence 7899999999999988766532 123322 2333344555555522 11 1234788887542222234
Q ss_pred HHHHHHh
Q 022342 72 LIVQHIH 78 (298)
Q Consensus 72 ~i~~~i~ 78 (298)
.|.+.|.
T Consensus 251 ~I~~~l~ 257 (263)
T 1p5z_B 251 SLVEKVK 257 (263)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 102
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=93.29 E-value=0.091 Score=43.55 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=39.5
Q ss_pred CCeEEEEeCCchhHHHhhhhcccccCCCCH---HHHHH---HHHhhhhhHHHhhcccccccce-EEecCCCCCchhHHHH
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTVERGRDV---DSVLE---QYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDNHVAIDLI 73 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~ergr~~---~~v~~---~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~~~~~~~i 73 (298)
.|+.||+++|.++++.|...|+. .+++.. +.+.+ .|....+|..+.|- ..++ ++|+++..-....+.|
T Consensus 116 ~~~~i~l~~~~~~~~~R~~~R~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~id~~~~~e~v~~~i 190 (199)
T 2bwj_A 116 PQLVICMDCSADTMTNRLLQMSR-SSLPVDDTTKTIAKRLEAYYRASIPVIAYYE----TKTQLHKINAEGTPEDVFLQL 190 (199)
T ss_dssp CSEEEEEECCHHHHHHHHHHTCC-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHSEEEEEETTSCHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH----hcCCEEEEECCCCHHHHHHHH
Confidence 37899999999999888888864 234322 22222 23333444333332 2345 7787533222333444
Q ss_pred HHHHh
Q 022342 74 VQHIH 78 (298)
Q Consensus 74 ~~~i~ 78 (298)
.+.+.
T Consensus 191 ~~~l~ 195 (199)
T 2bwj_A 191 CTAID 195 (199)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 103
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=93.24 E-value=0.17 Score=41.45 Aligned_cols=71 Identities=18% Similarity=0.398 Sum_probs=42.4
Q ss_pred CeEEEEeCCchhHHHhhhhcccc-cCCC-CHHHH---HHHHHhhhhhHHHhhcccccccce--EEecCCCCCchhHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTV-ERGR-DVDSV---LEQYAKFVKPAFDDFVLPSKKYAD--VIIPRGGDNHVAIDLIV 74 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~-ergr-~~~~v---~~~~~~~~~p~~~~~i~P~~~~AD--iii~~~~~~~~~~~~i~ 74 (298)
|+.||+++|.++++.|-..|+.. .|.. +.+.+ ++.|.....|.++.| +.+| ++|+++. .++.+.
T Consensus 112 ~~vi~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~ri~~~~~~~~~~~~~~-----~~~~~~~~id~~~----~~~~~~ 182 (194)
T 1qf9_A 112 KFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHY-----NKFDKVKIIPANR----DVNEVY 182 (194)
T ss_dssp EEEEEEECCHHHHHHHHHHHHTTSCCTTCSHHHHHHHHHHHHHTHHHHHHHH-----HHTTCEEEEECSS----CHHHHH
T ss_pred CEEEEEECCHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHhHHHHHHHH-----HhCCCEEEEECCC----CHHHHH
Confidence 67899999999999998888642 2222 23443 333444455666655 3367 7787742 234444
Q ss_pred HHHhhhc
Q 022342 75 QHIHTKL 81 (298)
Q Consensus 75 ~~i~~~l 81 (298)
+.|.+.+
T Consensus 183 ~~i~~~l 189 (194)
T 1qf9_A 183 NDVENLF 189 (194)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 104
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=93.07 E-value=0.26 Score=40.30 Aligned_cols=26 Identities=42% Similarity=0.606 Sum_probs=20.8
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCC
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRD 29 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~ 29 (298)
|+.||+++|.++++.||+..+. ||++
T Consensus 116 ~~~i~l~~~~~~~~~rRl~~~~--R~r~ 141 (192)
T 1kht_A 116 DLIIVVETTGDEILMRRMSDET--RVRD 141 (192)
T ss_dssp SEEEEEECCHHHHHHHHHTSSS--CSSS
T ss_pred CEEEEEeCCHHHHHHHHhhhcc--cCCC
Confidence 7899999999999988887653 4443
No 105
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=92.89 E-value=0.079 Score=43.72 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=45.1
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHh--hhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAK--FVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~--~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (298)
++.||+++|.++.+.|-..|... ..|.+...-..|.. ...-.|+.|-.+....++++|+.........+.+++.|.+
T Consensus 106 ~~~v~l~~~~e~~~~R~~~R~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Idt~~~~~~~~~~i~~~i~~ 184 (193)
T 2rhm_A 106 PIQIRCVASGDVLVERILSRIAQ-GARHPGHCDDRSPADLELVRSRGDIPPLPLGGPLLTVDTTFPEQIDMNAIVQWVRQ 184 (193)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHT-TCC--------CHHHHHHHHHSCCCCCCCCCSCEEEEECSSGGGCCHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHhcCc-cccCcccccCccCcchhhHHHHhcCCCccCCCCEEEEeCCCCcccCHHHHHHHHHH
Confidence 46899999999988887777532 11222211112221 1122244443333347999999866555566777788776
Q ss_pred hcc
Q 022342 80 KLG 82 (298)
Q Consensus 80 ~l~ 82 (298)
.+.
T Consensus 185 ~l~ 187 (193)
T 2rhm_A 185 HLQ 187 (193)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 106
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=92.78 E-value=0.29 Score=40.14 Aligned_cols=72 Identities=14% Similarity=0.208 Sum_probs=45.4
Q ss_pred CeEEEEeCCchhHHHhhhhccccc--CCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVE--RGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~e--rgr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (298)
+..||+++|.++++.|-..|+... ...+.++.++.+...+.|.| ++.+|++|++... .++.+.+.|.+
T Consensus 95 ~~vV~L~~~~e~~~~Rl~~r~~r~~~~~~~~~~~i~~~~~~r~~~~-------~~~~~~~Idt~~~---s~ee~~~~I~~ 164 (184)
T 2iyv_A 95 HTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLY-------RRVATMRVDTNRR---NPGAVVRHILS 164 (184)
T ss_dssp SCEEEEECCHHHHHHHTTCCCCCSSTTSCCHHHHHHHHHHHHHHHH-------HHHCSEEEECSSS---CHHHHHHHHHT
T ss_pred CeEEEEeCCHHHHHHHHhCCCCCCCccCCCHHHHHHHHHHHHHHHH-------hccCCEEEECCCC---CHHHHHHHHHH
Confidence 578999999999998876664311 12244555555444345544 3668999987432 35666666666
Q ss_pred hccc
Q 022342 80 KLGQ 83 (298)
Q Consensus 80 ~l~~ 83 (298)
.+..
T Consensus 165 ~l~~ 168 (184)
T 2iyv_A 165 RLQV 168 (184)
T ss_dssp TSCC
T ss_pred HHhh
Confidence 6543
No 107
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=92.75 E-value=0.16 Score=42.49 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=43.1
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCC-CCHH---HHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERG-RDVD---SVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~erg-r~~~---~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (298)
|+.||+++|.++++.|-..|. |. .+.+ ..++.|.....|.++.| ..++++|++.. .++.+.+.|
T Consensus 128 ~~vi~l~~~~e~~~~Rl~~R~---r~~~~~e~~~~r~~~~~~~~~~~~~~~-----~~~~~~Id~~~----~~eev~~~I 195 (201)
T 2cdn_A 128 DAVLEFRVSEEVLLERLKGRG---RADDTDDVILNRMKVYRDETAPLLEYY-----RDQLKTVDAVG----TMDEVFARA 195 (201)
T ss_dssp CEEEEEECCHHHHHHHHHHHC---CTTCSHHHHHHHHHHHHHHTTTHHHHT-----TTTEEEEECCS----CHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHcCC---CCCCCHHHHHHHHHHHHHhhHHHHHHh-----cCcEEEEeCCC----CHHHHHHHH
Confidence 689999999999988877763 21 1233 33445555556666666 45889998732 345555555
Q ss_pred hhhc
Q 022342 78 HTKL 81 (298)
Q Consensus 78 ~~~l 81 (298)
.+.+
T Consensus 196 ~~~l 199 (201)
T 2cdn_A 196 LRAL 199 (201)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5543
No 108
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=92.74 E-value=0.11 Score=43.03 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=42.5
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (298)
..|||++|+..+|.|| ++.++++.+..++.+..| ..++|++|.|. +...+.+.+.+.|.+
T Consensus 119 ~~ifi~~p~~~~l~~R------------~~~i~r~~~~~~~~~~~~----~~~~d~~i~n~-~~~~~~~~l~~~i~~ 178 (180)
T 1kgd_A 119 FVVFIAAPTITPGLNE------------DESLQRLQKESDILQRTY----AHYFDLTIINN-EIDETIRHLEEAVEL 178 (180)
T ss_dssp EEEEEECCSCCTTSCC------------SHHHHHHHHHHHHHHHHH----GGGCSEEEECS-SHHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHhh------------HHHHHHHHHHHHHHHHhh----hCCCcEEEECc-CHHHHHHHHHHHHHH
Confidence 6799999988888876 355577777666665443 36899999874 455666766666653
No 109
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=92.49 E-value=0.11 Score=45.45 Aligned_cols=72 Identities=15% Similarity=0.119 Sum_probs=38.7
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+|+|.++.+.|. .||..|+ .-..|++.++-.|..+.+-. ....++|++...-... +.|.+.|.+.|
T Consensus 147 Dl~I~Ldv~~e~~~~Ri-~rdr~E~------~~~e~~~rv~~~y~~la~~~-~~~~~vIDa~~sieeV-~~I~~~l~~~l 217 (223)
T 3ld9_A 147 DITFIIDVDINESLSRS-CKNGYEF------ADMEFYYRVRDGFYDIAKKN-PHRCHVITDKSETYDI-DDINFVHLEVI 217 (223)
T ss_dssp SEEEEEECC-----------------------CHHHHHHHHHHHHHHHHHC-TTTEEEEESSCSSSCC-CHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHh-ccCcccc------chHHHHHHHHHHHHHHHHHC-CCCEEEEcCCCCHHHH-HHHHHHHHHHH
Confidence 89999999999999987 4443332 22346666777777775433 2368899986665444 77777776655
Q ss_pred c
Q 022342 82 G 82 (298)
Q Consensus 82 ~ 82 (298)
.
T Consensus 218 g 218 (223)
T 3ld9_A 218 K 218 (223)
T ss_dssp H
T ss_pred h
Confidence 3
No 110
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=92.44 E-value=0.2 Score=40.90 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=43.9
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCC--HHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRD--VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~--~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (298)
++.||+++|.++++.|...|....|... .+.+.+.|.. +.|.|. +.+|++|+.... .++.+.+.|.+
T Consensus 94 ~~~i~l~~~~e~~~~R~~~r~~~~r~~~~~~~~i~~~~~~-r~~~y~-------~~~~~~Idt~~~---~~eev~~~I~~ 162 (175)
T 1via_A 94 GFCIYLKADFEYLKKRLDKDEISKRPLFYDEIKAKKLYNE-RLSKYE-------QKANFILNIENK---NIDELLSEIKK 162 (175)
T ss_dssp CEEEEEECCHHHHTTCCCGGGTTTSCTTCCHHHHHHHHHH-HHHHHH-------HHCSEEEECTTC---CHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHhcccCCCCCCcccHHHHHHHHHH-HHHHHH-------hcCCEEEECCCC---CHHHHHHHHHH
Confidence 5789999999999888766631223222 4555555554 555543 457999987433 35566666666
Q ss_pred hccc
Q 022342 80 KLGQ 83 (298)
Q Consensus 80 ~l~~ 83 (298)
.+..
T Consensus 163 ~l~~ 166 (175)
T 1via_A 163 VIKE 166 (175)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 5553
No 111
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=92.29 E-value=0.26 Score=40.42 Aligned_cols=68 Identities=22% Similarity=0.359 Sum_probs=37.6
Q ss_pred eEEEEeCCchhHHHhhh--hcccccCCCC----HHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCC-chhHHHHHH
Q 022342 3 MKIFVDTDADVRLARRI--RRDTVERGRD----VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDN-HVAIDLIVQ 75 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri--~RD~~ergr~----~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~-~~~~~~i~~ 75 (298)
+.||+++|.+++ .+|+ .++. .|+-. ..+.+.+....+.|.|. ++||++|++...+ ....+.|.+
T Consensus 100 ~vi~L~~~~e~l-~~Rl~~~~~~-~rp~~~~~~~~~~l~~~~~~r~~~y~-------~~ad~~Idt~~~~~~e~~~~I~~ 170 (185)
T 3trf_A 100 VVIYLTASIDTQ-LKRIGQKGEM-RRPLFIKNNSKEKLQQLNEIRKPLYQ-------AMADLVYPTDDLNPRQLATQILV 170 (185)
T ss_dssp EEEEEECCHHHH-HHHHHCCTTC-SSCCCCCHHHHHHHHHHHHHHHHHHH-------HHCSEEEECTTCCHHHHHHHHHH
T ss_pred cEEEEECCHHHH-HHHHhhcCCC-CCCCCCCCCHHHHHHHHHHHHHHHHh-------hcCCEEEECCCCCHHHHHHHHHH
Confidence 679999999985 5555 3332 23321 12334443344556554 3499999985533 233444444
Q ss_pred HHhh
Q 022342 76 HIHT 79 (298)
Q Consensus 76 ~i~~ 79 (298)
.+..
T Consensus 171 ~l~~ 174 (185)
T 3trf_A 171 DIKQ 174 (185)
T ss_dssp HSCC
T ss_pred HHHH
Confidence 4443
No 112
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=92.23 E-value=0.12 Score=45.62 Aligned_cols=76 Identities=13% Similarity=0.249 Sum_probs=43.2
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+|+|.++.+.|...|...+| .+.--..|++.++..|..+.+-... .++|++...-....+.|.+.|.+.|
T Consensus 156 Dlvi~Ldv~~e~~~~Ri~~R~~~dr---~E~~~~~~~~rv~~~y~~la~~~~~--~~vIDa~~sieeV~~~I~~~l~~~l 230 (236)
T 3lv8_A 156 DLTLYLDIDPKLGLERARGRGELDR---IEKMDISFFERARERYLELANSDDS--VVMIDAAQSIEQVTADIRRALQDWL 230 (236)
T ss_dssp SEEEEEECCHHHHHHC-----CCCT---TTTSCHHHHHHHHHHHHHHHHHCTT--EEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCCcch---hhhhHHHHHHHHHHHHHHHHHHCCC--EEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 8999999999999998777742222 1111134566677778777642222 7888875443334455555555554
Q ss_pred c
Q 022342 82 G 82 (298)
Q Consensus 82 ~ 82 (298)
.
T Consensus 231 ~ 231 (236)
T 3lv8_A 231 S 231 (236)
T ss_dssp T
T ss_pred H
Confidence 3
No 113
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=92.14 E-value=0.3 Score=39.91 Aligned_cols=72 Identities=15% Similarity=0.131 Sum_probs=39.8
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCC-CH--HHHHHHHHhhhhhHHHhhcccccccceEEe-cCCCCCchhHHHHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGR-DV--DSVLEQYAKFVKPAFDDFVLPSKKYADVII-PRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr-~~--~~v~~~~~~~~~p~~~~~i~P~~~~ADiii-~~~~~~~~~~~~i~~~i 77 (298)
|+.||+++|.++++.||+..+ .||+ +. .+.+.. .+.++..|...........-++| ++. ..++.+.+.|
T Consensus 117 ~~vi~l~~~~~~~~~rr~~~~--~R~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~I~d~~----~~~e~v~~~I 189 (194)
T 1nks_A 117 SVIFLLEADPKIILSRQKRDT--TRNRNDYSDESVILE-TINFARYAATASAVLAGSTVKVIVNVE----GDPSIAANEI 189 (194)
T ss_dssp SEEEEEECCHHHHHHHHHHCT--TTCCCCCCSHHHHHH-HHHHHHHHHHHHHHHHTCEEEEEECCS----SCHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhhc--ccCCCCccCHHHHHH-HHHHHHHHHHHHHHhcCCcEEEEeCCC----CCHHHHHHHH
Confidence 688999999999999987542 2455 21 223332 23355556655433322223677 542 2345555555
Q ss_pred hhh
Q 022342 78 HTK 80 (298)
Q Consensus 78 ~~~ 80 (298)
.+.
T Consensus 190 ~~~ 192 (194)
T 1nks_A 190 IRS 192 (194)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 114
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=91.99 E-value=0.22 Score=42.42 Aligned_cols=66 Identities=14% Similarity=0.282 Sum_probs=39.3
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
|+.+|+|.|.++.+.|+-.||--|. . .|++.++-.|....+..... =++|++.. .++.|.+.|.+.
T Consensus 123 Dl~i~Ld~~~e~~~~R~~~~dr~e~---~-----ef~~rv~~~y~~la~~~~~~-~~~IDa~~----~~eeV~~~I~~~ 188 (197)
T 3hjn_A 123 DLTFYIDVDVETALKRKGELNRFEK---R-----EFLERVREGYLVLAREHPER-IVVLDGKR----SIEEIHRDVVRE 188 (197)
T ss_dssp SEEEEEECCHHHHHHHC---CTTCC---H-----HHHHHHHHHHHHHHHHCTTT-EEEEETTS----CHHHHHHHHHHH
T ss_pred CceeecCcChHHHHHhCcCcCcccc---H-----HHHHHHHHHHHHHHHhCCCC-EEEEcCCC----CHHHHHHHHHHH
Confidence 8999999999999999877664332 1 46667887887775433222 24566533 244444444443
No 115
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=91.98 E-value=0.18 Score=43.73 Aligned_cols=75 Identities=12% Similarity=0.219 Sum_probs=45.3
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+|+|.++.+.|...|.-.+| .+.--..|++.++..|..+.+-. .--++|+....-....+.|.+.|.+.|
T Consensus 134 Dl~i~Ldv~~e~~~~Ri~~R~~~dr---~E~~~~~f~~rv~~~y~~la~~~--~~~~vIDa~~s~eeV~~~I~~~l~~~l 208 (213)
T 4tmk_A 134 DLTLYLDVTPEVGLKRARARGELDR---IEQESFDFFNRTRARYLELAAQD--KSIHTIDATQPLEAVMDAIRTTVTHWV 208 (213)
T ss_dssp SEEEEEECCHHHHHHHHHHHSSCCT---TTTSCHHHHHHHHHHHHHHHHTC--TTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCCccc---hhhhHHHHHHHHHHHHHHHHHHC--CcEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999888732111 12112346666888888876432 335777764433333344444454443
No 116
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=91.90 E-value=0.28 Score=41.00 Aligned_cols=67 Identities=12% Similarity=0.092 Sum_probs=39.1
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+++|.++++.|-..| .+| .+- .+|.+.++..|..... ..++++|++.. .++.+.+.|.+.+
T Consensus 132 d~vi~l~~~~e~~~~Rl~~r--~~r-~~~----~~~~~~~~~~~~~~~~---~~~~~~Id~~~----~~~~~~~~i~~~l 197 (212)
T 2wwf_A 132 DVVFYLNVPPNYAQNRSDYG--EEI-YEK----VETQKKIYETYKHFAH---EDYWINIDATR----KIEDIHNDIVKEV 197 (212)
T ss_dssp SEEEEEECCTTGGGGSTTTT--SST-TCS----HHHHHHHHHHGGGGTT---CTTEEEEECSS----CHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHhhccC--ccc-ccH----HHHHHHHHHHHHHHhc---cCCEEEEECCC----CHHHHHHHHHHHH
Confidence 78999999999987764332 112 121 2344444445554433 67899998742 3445555555544
Q ss_pred c
Q 022342 82 G 82 (298)
Q Consensus 82 ~ 82 (298)
.
T Consensus 198 ~ 198 (212)
T 2wwf_A 198 T 198 (212)
T ss_dssp T
T ss_pred H
Confidence 3
No 117
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=91.77 E-value=0.27 Score=43.63 Aligned_cols=75 Identities=12% Similarity=0.048 Sum_probs=39.9
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCC-----C------HHHHHHHHHhhhhhHHHhhcccccccceEEe----------
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGR-----D------VDSVLEQYAKFVKPAFDDFVLPSKKYADVII---------- 60 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr-----~------~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii---------- 60 (298)
+++||+++|.++++.|...|....|+- . ..+.+.+....+.|.|+. ||++|
T Consensus 143 ~~vV~L~a~~e~l~~Rl~~~~~~~Rpl~~~~~~~d~~~~~~~~l~~l~~eR~~lY~~--------ad~vi~~~~~~~~~~ 214 (250)
T 3nwj_A 143 GISIWLDVPLEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEAYTK--------ASARVSLENITLKLG 214 (250)
T ss_dssp SEEEEEECCHHHHHHHHHC----------------CHHHHHHHHHHHHHHHHHHHTT--------SSEEEEHHHHHHHHT
T ss_pred CcEEEEECCHHHHHHHHhhcCCCCCCcccCCCcccchhhHHHHHHHHHHHHHHHHhh--------CCEEEEecccccccc
Confidence 579999999999877765533222321 1 012344444446666543 89998
Q ss_pred --cCCCCC-chhHHHHHHHHhhhcccc
Q 022342 61 --PRGGDN-HVAIDLIVQHIHTKLGQH 84 (298)
Q Consensus 61 --~~~~~~-~~~~~~i~~~i~~~l~~~ 84 (298)
+....+ ...++.|++.+...+..+
T Consensus 215 ~iDTs~~s~eev~~~I~~~i~~~~~~~ 241 (250)
T 3nwj_A 215 YRSVSDLTPAEIAIEAFEQVQSYLEKE 241 (250)
T ss_dssp CSSGGGCCHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCCCCHHHHHHHHHHHHHHHhhcc
Confidence 332222 234456666666655433
No 118
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=91.66 E-value=0.31 Score=41.49 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=18.4
Q ss_pred CeEEEEeCCchhHHHhhhhcc
Q 022342 2 NMKIFVDTDADVRLARRIRRD 22 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD 22 (298)
|+.||+|+|.++.+.|...|.
T Consensus 110 ~~vi~L~~~~~~~~~R~~~r~ 130 (222)
T 1zak_A 110 DTFILLDVPDELLVERVVGRR 130 (222)
T ss_dssp SEEEEEECCHHHHHHHHTTEE
T ss_pred CEEEEEECCHHHHHHHHHcCC
Confidence 789999999999998877664
No 119
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=91.22 E-value=0.4 Score=40.19 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=41.7
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhcc
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLG 82 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l~ 82 (298)
..||+++|.++++.|-..|+... .+.+.+ +-.+..+..++...||++|++.. .++.+.+.|.+.+.
T Consensus 127 ~vv~l~~~~e~l~~Rl~~R~~~~--~~~~~l--------~~~~~~~~~~~~~~~~~~Id~~~----~~~e~~~~I~~~l~ 192 (200)
T 4eun_A 127 DFLHLDGPAEVIKGRMSKREGHF--MPASLL--------QSQLATLEALEPDESGIVLDLRQ----PPEQLIERALTWLD 192 (200)
T ss_dssp EEEEEECCHHHHHHHHTTCSCCS--SCGGGH--------HHHHHHCCCCCTTSCEEEEETTS----CHHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHhcccCC--CCHHHH--------HHHHHHhCCCCCCCCeEEEECCC----CHHHHHHHHHHHHH
Confidence 46899999999888776665422 222222 22345555667777999999743 35555555555554
No 120
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=91.05 E-value=0.57 Score=40.10 Aligned_cols=78 Identities=14% Similarity=0.186 Sum_probs=43.0
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+|+|.++.+.|...|.-. ..| .+.--..|++.++-.|.++.+-.... =++|+....-....+.|.+.|.+.|
T Consensus 126 Dl~i~Ld~~~e~~~~Ri~~r~~~-~dr-~e~~~~~f~~~v~~~Y~~l~~~~~~~-~~~IDa~~~~e~V~~~i~~~i~~~L 202 (205)
T 4hlc_A 126 DLTIYLNVSAEVGRERIIKNSRD-QNR-LDQEDLKFHEKVIEGYQEIIHNESQR-FKSVNADQPLENVVEDTYQTIIKYL 202 (205)
T ss_dssp SEEEEEECCHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHHHHSCCTT-EEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEeeeCCCHHHHHHHHHhcCCc-ccc-hhccCHHHHHHHHHHHHHHHHhCCCC-EEEEECCCCHHHHHHHHHHHHHHHH
Confidence 89999999999999887665321 111 12222346667888888876533222 2456653332223344555555544
Q ss_pred c
Q 022342 82 G 82 (298)
Q Consensus 82 ~ 82 (298)
+
T Consensus 203 ~ 203 (205)
T 4hlc_A 203 E 203 (205)
T ss_dssp C
T ss_pred h
Confidence 3
No 121
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=90.85 E-value=0.56 Score=39.13 Aligned_cols=72 Identities=8% Similarity=0.071 Sum_probs=38.5
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+++|.++++.|- .|+ .+| .+. .++.+.++..|..+.... ....++|+++..-....+.|.+.+...+
T Consensus 131 d~vi~l~~~~e~~~~Rl-~r~-~~~-~~~----~~~~~~~~~~~~~~~~~~-~~~~~~Id~~~~~e~~~~~i~~~l~~~l 202 (215)
T 1nn5_A 131 DLVLFLQLQLADAAKRG-AFG-HER-YEN----GAFQERALRCFHQLMKDT-TLNWKMVDASKSIEAVHEDIRVLSEDAI 202 (215)
T ss_dssp SEEEEEECCHHHHHHC-------CT-TCS----HHHHHHHHHHHHHHTTCT-TSCEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHh-ccC-ccc-cch----HHHHHHHHHHHHHHHHhC-CCCEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 78999999999887764 443 122 111 234445666777765433 2345788763322233444445554443
No 122
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=90.47 E-value=0.81 Score=37.06 Aligned_cols=65 Identities=15% Similarity=0.173 Sum_probs=39.0
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhccc-ccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLP-SKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P-~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
..||+++|.++++.|-..|+-... + ..+++. .+..|-.| +...||++|++.. .++.+.+.|.+.+
T Consensus 106 ~vv~l~~~~e~~~~R~~~R~~~~~--~-~~~~~~-------~~~~~~~~~~~~~~~~~Id~~~----~~~~~~~~i~~~l 171 (175)
T 1knq_A 106 SFIYLKGDFDVIESRLKARKGHFF--K-TQMLVT-------QFETLQEPGADETDVLVVDIDQ----PLEGVVASTIEVI 171 (175)
T ss_dssp EEEEEECCHHHHHHHHHTSTTCCC--C-HHHHHH-------HHHHCCCCCTTCTTEEEEECSS----CHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHhccCCCC--c-hHHHHH-------HHHhhhCcccCCCCeEEEeCCC----CHHHHHHHHHHHH
Confidence 589999999999888777752211 1 333332 12333334 5667999999742 3445555555443
No 123
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=90.37 E-value=0.64 Score=40.33 Aligned_cols=77 Identities=13% Similarity=0.153 Sum_probs=45.5
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+++|.++.+.|...|.. +.++-.. --..|.+.++..|........ ..-++|++...-....+.|.+.|.+.|
T Consensus 150 d~vi~L~~~~e~~~~R~~~R~~-~~dr~e~-~~~~~~~rv~~~y~~l~~~~~-~~~~vIDa~~s~eev~~~I~~~l~~~l 226 (229)
T 4eaq_A 150 DLTIYLNVSAEVGRERIIKNSR-DQNRLDQ-EDLKFHEKVIEGYQEIIHNES-QRFKSVNADQPLENVVEDTYQTIIKYL 226 (229)
T ss_dssp SEEEEEECCHHHHHHHHHHC------CCCH-HHHHHHHHHHHHHHHHTTTCT-TTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCC-Cccchhh-hhHHHHHHHHHHHHHHHHhCC-CCEEEEeCCCCHHHHHHHHHHHHHHHh
Confidence 7899999999999888777642 1222211 233455667777877754332 345778875444444455555555544
No 124
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=90.13 E-value=0.28 Score=40.39 Aligned_cols=22 Identities=18% Similarity=0.462 Sum_probs=19.1
Q ss_pred CeEEEEeCCchhHHHhhhhccc
Q 022342 2 NMKIFVDTDADVRLARRIRRDT 23 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~ 23 (298)
|+.||+++|.++++.|...|+.
T Consensus 114 ~~vi~l~~~~e~~~~R~~~R~~ 135 (196)
T 2c95_A 114 TLLLYVDAGPETMTQRLLKRGE 135 (196)
T ss_dssp SEEEEEECCHHHHHHHHHHHHT
T ss_pred CEEEEEECCHHHHHHHHHccCC
Confidence 7899999999999998777763
No 125
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=90.12 E-value=0.38 Score=39.93 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=35.8
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (298)
..||+.+++...+.+|+. +||++-++.+.+......+..+. .+.||+||.+. +...+.+.+.+.|+
T Consensus 120 ~~v~~~~~~~e~l~~Rl~----~R~~~~~~~i~~rl~~~~~~~~~-----~~~~d~vi~n~-~~~~~~~~l~~~i~ 185 (205)
T 3tr0_A 120 LSIFILPPSIEALRERLI----KRRQDDTAIIEQRLALAREEMAH-----YKEFDYLVVND-NFDQAVQNLIHIIS 185 (205)
T ss_dssp EEEEEECSCHHHHHHHHH----TCTTSCSSTHHHHHHHHHHHHTT-----GGGCSEEEECS-SHHHHHHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHH----HhCCCCHHHHHHHHHHHHHHHhc-----ccCCCEEEECC-CHHHHHHHHHHHHH
Confidence 468998876666666654 34444444444444444444322 27789999864 33334444444443
No 126
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=89.89 E-value=0.22 Score=40.30 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=35.3
Q ss_pred CeEEEEeCCchhHHHhhhhccccc--CCCC--HHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVE--RGRD--VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~e--rgr~--~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (298)
++.+|++++.+++..|...|.... ++.+ .+.+..+|. .+.|.| ++.||++|++... .++.+.+.|
T Consensus 98 ~~~i~l~~~~~~l~~R~~~r~~r~~~~~~~~~~~~~~~~~~-~r~~~~-------~~~a~~~id~~~~---~~~~~~~~i 166 (173)
T 1kag_A 98 GVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALAN-ERNPLY-------EEIADVTIRTDDQ---SAKVVANQI 166 (173)
T ss_dssp SEEEECCCCHHHHHSCC------CCSSSSCCCHHHHHHHHH-HHHHHH-------HHHCSEEC--------CHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHhCCCCCCCCCCCCchHHHHHHHHH-HHHHHH-------HhhCCEEEECCCC---CHHHHHHHH
Confidence 678999999999888877663211 2222 444445544 355544 3558999987432 234444444
Q ss_pred hhhc
Q 022342 78 HTKL 81 (298)
Q Consensus 78 ~~~l 81 (298)
.+.+
T Consensus 167 ~~~l 170 (173)
T 1kag_A 167 IHML 170 (173)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 127
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=89.53 E-value=0.36 Score=42.22 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=43.9
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
|+.||+|+|.++.+.|...|.-. ...|.--..|++.++..|..+.+-. ...-++|+... .++.+.+.|.+.
T Consensus 153 Dl~I~Ldv~~e~~~~Ri~~R~~~---dr~E~~~~ef~~rv~~~Y~~la~~~-~~~~~vIDa~~----s~eeV~~~I~~~ 223 (227)
T 3v9p_A 153 DLTVLFDVPPQIASARRGAVRMP---DKFESESDAFFARTRAEYLRRAQEA-PHRFVIVDSSE----PIAQIRKQLEGV 223 (227)
T ss_dssp SEEEEEECCSSCGGGTTTCCCCC------CCHHHHHHHHHHHHHHHHHHHC-TTTEEEEETTS----CHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhccCc---cchhhhhHHHHHHHHHHHHHHHHHh-cCCEEEEeCCC----CHHHHHHHHHHH
Confidence 89999999999999988777411 1222222456667888888876433 12357788643 344454444443
No 128
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=89.37 E-value=0.23 Score=40.17 Aligned_cols=72 Identities=8% Similarity=0.034 Sum_probs=37.8
Q ss_pred CeEEEEeCCchhHHHhhh--hcccccCCCC-HHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHh
Q 022342 2 NMKIFVDTDADVRLARRI--RRDTVERGRD-VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri--~RD~~ergr~-~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (298)
|+.||+++|.++++.|-. .|. ..|... .++..+. ++..|......++. ||++|++... .++.+.+.|.
T Consensus 95 ~~~i~l~~~~e~~~~R~~~~~r~-~~r~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~Id~~~~---~~~~~~~~i~ 165 (173)
T 1e6c_A 95 GTVVYLFAPAEELALRLQASLQA-HQRPTLTGRPIAEE----MEAVLREREALYQD-VAHYVVDATQ---PPAAIVCELM 165 (173)
T ss_dssp SEEEEEECCHHHHHHHHHHHHCS-CCCCCTTHHHHHHH----HHHHHHHHHHHHHH-HCSEEEETTS---CHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHhhccCC-CCCCcCCCCCHHHH----HHHHHHHHHHHHHh-CcEEEECCCC---CHHHHHHHHH
Confidence 689999999999987766 552 112211 1222111 11122222111233 8999987432 3455555555
Q ss_pred hhcc
Q 022342 79 TKLG 82 (298)
Q Consensus 79 ~~l~ 82 (298)
+.+.
T Consensus 166 ~~l~ 169 (173)
T 1e6c_A 166 QTMR 169 (173)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 5543
No 129
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=89.23 E-value=0.082 Score=44.71 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=26.2
Q ss_pred HHHHHHHHhhhhhHHHhhcccc--cccceEEecCC
Q 022342 31 DSVLEQYAKFVKPAFDDFVLPS--KKYADVIIPRG 63 (298)
Q Consensus 31 ~~v~~~~~~~~~p~~~~~i~P~--~~~ADiii~~~ 63 (298)
+++.+.|.+...|+++.|++|. +++||+||+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~~~~~~~~~AD~vI~N~ 200 (201)
T 1rz3_A 166 KQNIQKFINRYWKAEDYYLETEEPIKRADVVFDMT 200 (201)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHCHHHHCSEEEC--
T ss_pred HHHHHHHHhheeHHHHHHhCCCCcHhhCcEEecCC
Confidence 7888888777899999999888 68999999874
No 130
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=88.93 E-value=0.37 Score=41.57 Aligned_cols=76 Identities=12% Similarity=0.150 Sum_probs=44.0
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+|+|.++.+.|...|.-.+| .+.--..|++.++..|..+.+-.. ..-++|+....-....+.|.+.|.+.|
T Consensus 133 Dlvi~Ld~~~e~~~~Ri~~R~~~dr---~E~~~~~~~~rv~~~y~~l~~~~~-~~~~vIDa~~s~eeV~~~I~~~l~~~l 208 (213)
T 4edh_A 133 DLTLVFDLPVEIGLARAAARGRLDR---FEQEDRRFFEAVRQTYLQRAAQAP-ERYQVLDAGLPLAEVQAGLDRLLPNLL 208 (213)
T ss_dssp SEEEEEECCHHHHHHHHCCCSSCCT---TTTSCHHHHHHHHHHHHHHHHHCT-TTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhcCCcCc---ccccHHHHHHHHHHHHHHHHHHCC-CcEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999877732111 111112355557777776654222 346788875433333344444444443
No 131
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=88.93 E-value=0.72 Score=37.60 Aligned_cols=72 Identities=14% Similarity=0.260 Sum_probs=38.6
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHH-HhhhhhHHHhhcccccccceEEecCCCCCchh----HHHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQY-AKFVKPAFDDFVLPSKKYADVIIPRGGDNHVA----IDLIVQH 76 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~-~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~----~~~i~~~ 76 (298)
|+.||+++|.++++.|...| |++-....+.. ....+-.|......+. +|++|+..+.+... ++.++++
T Consensus 98 ~~vi~L~~~~e~l~~R~~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~y~--~~~~i~~~~~~~~ev~~~v~~i~~~ 170 (180)
T 3iij_A 98 HIVFVLRTDTNVLYERLETR-----GYNEKKLTDNIQCEIFQVLYEEATASYK--EEIVHQLPSNKPEELENNVDQILKW 170 (180)
T ss_dssp SEEEEEECCHHHHHHHHHHT-----TCCHHHHHHHHHHHHTTHHHHHHHHHSC--GGGEEEEECSSHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 68999999999999887665 33332222211 1222333333322222 58888765555333 3455555
Q ss_pred Hhhh
Q 022342 77 IHTK 80 (298)
Q Consensus 77 i~~~ 80 (298)
|++.
T Consensus 171 l~~~ 174 (180)
T 3iij_A 171 IEQW 174 (180)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 132
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=87.96 E-value=0.81 Score=38.49 Aligned_cols=21 Identities=29% Similarity=0.419 Sum_probs=19.0
Q ss_pred CCeEEEEeCCchhHHHhhhhc
Q 022342 1 MNMKIFVDTDADVRLARRIRR 21 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~R 21 (298)
+|+.||+++|.++++.|-..|
T Consensus 107 ~d~vi~l~~~~e~~~~Rl~~R 127 (216)
T 3dl0_A 107 IDYVINIQVDKDVLMERLTGR 127 (216)
T ss_dssp CSEEEEEECCGGGHHHHHHTE
T ss_pred CCEEEEEECCHHHHHHHHHCC
Confidence 378999999999999998888
No 133
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=87.42 E-value=0.58 Score=40.61 Aligned_cols=74 Identities=15% Similarity=0.177 Sum_probs=45.1
Q ss_pred CeEEEE-eCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhccc---ccccceEEec-CCCCCchhHHHHHHH
Q 022342 2 NMKIFV-DTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLP---SKKYADVIIP-RGGDNHVAIDLIVQH 76 (298)
Q Consensus 2 d~kifv-d~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P---~~~~ADiii~-~~~~~~~~~~~i~~~ 76 (298)
|+.||+ |.|.++.+.|.-. |+...|. ..|++.++-.|.++.+- ....--++|+ .+..-....+.|.+.
T Consensus 127 Dlti~L~dv~pe~~~~R~~~-----~~dr~E~--~~f~~rvr~~Y~~la~~~~~~~~~~~~vID~a~~s~eeV~~~I~~~ 199 (216)
T 3tmk_A 127 DLTLFLSTQDVDNNAEKSGF-----GDERYET--VKFQEKVKQTFMKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQI 199 (216)
T ss_dssp SEEEEEECSCCSCGGGCCSS-----SCCTTCC--HHHHHHHHHHHHHHHHHHHHTTCCSEEEEECTTCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCHHHHHHHhcc-----CcccccH--HHHHHHHHHHHHHHHHhccccCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 899999 9999998877432 2222333 47888899999998753 1222347788 433322333445555
Q ss_pred Hhhhcc
Q 022342 77 IHTKLG 82 (298)
Q Consensus 77 i~~~l~ 82 (298)
|.+.+.
T Consensus 200 i~~~l~ 205 (216)
T 3tmk_A 200 VEPVLS 205 (216)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555443
No 134
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=87.19 E-value=2.4 Score=37.13 Aligned_cols=68 Identities=24% Similarity=0.345 Sum_probs=42.6
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccc----cceEEecCCCCCchhHHHHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKK----YADVIIPRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~----~ADiii~~~~~~~~~~~~i~~~i 77 (298)
++.||+++|.++++.|-..|. +..+. ++++. .+..|-+|... .++++|+.... ..++.+.+.|
T Consensus 101 ~~vi~l~~~~e~~~~R~~~R~---~~~~~-~~l~~-------~~~~~e~~~~~~~~~~~~~~Id~~~~--~~~~ei~~~I 167 (260)
T 3a4m_A 101 YAIIYLKASLDVLIRRNIERG---EKIPN-EVIKK-------MYEKFDEPGKKYKWDEPFLIIDTTKD--IDFNEIAKKL 167 (260)
T ss_dssp EEEEEEECCHHHHHHHHHHTT---CSSCH-HHHHH-------HHHHCCCTTSSCGGGCCSEEEETTSC--CCHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHhCC---CCCCH-HHHHH-------HHHHhcCccccCCCCCCEEEEeCCCC--CCHHHHHHHH
Confidence 578999999999998876653 22222 23322 35567677653 48999987552 2355666666
Q ss_pred hhhcc
Q 022342 78 HTKLG 82 (298)
Q Consensus 78 ~~~l~ 82 (298)
.+.+.
T Consensus 168 ~~~l~ 172 (260)
T 3a4m_A 168 IEKSK 172 (260)
T ss_dssp HHHHT
T ss_pred Hhccc
Confidence 55544
No 135
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=85.04 E-value=1.7 Score=35.69 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=17.2
Q ss_pred CCeEEEEeCCchhHHHhhhhc
Q 022342 1 MNMKIFVDTDADVRLARRIRR 21 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~R 21 (298)
.|..||+++|.++++.|-..|
T Consensus 101 ~~~vi~l~~~~e~~~~Rl~~R 121 (184)
T 1y63_A 101 FHMVVVLHTSTEVLFERLTKR 121 (184)
T ss_dssp CSEEEEEECCHHHHHHHHHHT
T ss_pred CCEEEEEECCHHHHHHHHHhC
Confidence 367899999999988776655
No 136
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=84.82 E-value=1.1 Score=36.46 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=41.4
Q ss_pred CeEEEEeCCchhHHHhhhhcccc-cCC-CCHHHH---HHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHH
Q 022342 2 NMKIFVDTDADVRLARRIRRDTV-ERG-RDVDSV---LEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQH 76 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~-erg-r~~~~v---~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~ 76 (298)
|+.||+++|.++++.|-..|+.. .|. .+.+.+ ++.|.....|.++.|-+ ...+++|++. ..++.+.+.
T Consensus 107 ~~vi~l~~~~e~~~~R~~~R~~~~~r~~~~~~~~~~r~~~~~~~~~~l~~~~~~---~~~~~~id~~----~~~~~v~~~ 179 (186)
T 3cm0_A 107 LGVVLVEVPEEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEA---RGVLKRVDGL----GTPDEVYAR 179 (186)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHH---TTCEEEEECC----SCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh---cCcEEEEECC----CCHHHHHHH
Confidence 67899999999998887777521 121 233433 34444444555555421 1226888763 234555555
Q ss_pred Hhhhc
Q 022342 77 IHTKL 81 (298)
Q Consensus 77 i~~~l 81 (298)
|.+.+
T Consensus 180 i~~~l 184 (186)
T 3cm0_A 180 IRAAL 184 (186)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55443
No 137
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=84.43 E-value=1.5 Score=36.17 Aligned_cols=70 Identities=13% Similarity=0.173 Sum_probs=38.1
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKL 81 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l 81 (298)
|+.||+++|.++++. .|+- ++ .+. .+|.+.++..|..+..-. ....++|++...-....+.|.+.+.+.+
T Consensus 123 d~vi~l~~~~e~~~~---~R~~-d~---~e~--~~~~~rl~~~y~~~~~~~-~~~~~~Id~~~~~~~v~~~i~~~l~~~l 192 (204)
T 2v54_A 123 DLVIFLESGSKEINR---NVGE-EI---YED--VTFQQKVLQEYKKMIEEG-DIHWQIISSEFEEDVKKELIKNIVIEAI 192 (204)
T ss_dssp SEEEEECCCHHHHTT---CCSS-ST---TCC--SHHHHHHHHHHHHHHTTC-SSCEEEECTTSCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHh---hcCc-cc---ccH--HHHHHHHHHHHHHHHHhC-CCcEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 789999999998876 3421 11 110 244555666676664322 2345788764332333444455554443
No 138
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=84.26 E-value=0.96 Score=38.51 Aligned_cols=21 Identities=19% Similarity=0.066 Sum_probs=18.6
Q ss_pred CeEEEEeCCchhHHHhhhhcc
Q 022342 2 NMKIFVDTDADVRLARRIRRD 22 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD 22 (298)
|+.||+++|.++++.|...|.
T Consensus 109 ~~vi~L~~~~~~~~~R~~~R~ 129 (227)
T 1zd8_A 109 DTVINLNVPFEVIKQRLTARW 129 (227)
T ss_dssp CEEEEEECCHHHHHHHHTCEE
T ss_pred CEEEEEECCHHHHHHHHHcCc
Confidence 789999999999999887774
No 139
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=84.05 E-value=0.92 Score=38.06 Aligned_cols=21 Identities=10% Similarity=0.248 Sum_probs=18.8
Q ss_pred CCeEEEEeCCchhHHHhhhhc
Q 022342 1 MNMKIFVDTDADVRLARRIRR 21 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~R 21 (298)
+|+.||+++|.++++.|-..|
T Consensus 107 ~d~vi~l~~~~e~~~~Rl~~R 127 (216)
T 3fb4_A 107 LDYVLNIKVEQEELMKRLTGR 127 (216)
T ss_dssp CSEEEEEECCHHHHHHHHHSE
T ss_pred CCEEEEEECCHHHHHHHHHcC
Confidence 378999999999999998888
No 140
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=82.64 E-value=0.26 Score=41.30 Aligned_cols=72 Identities=10% Similarity=0.152 Sum_probs=43.7
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCC--C-HHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGR--D-VDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr--~-~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (298)
|+.||+++|.++++.|-..|+...+|+ + .+. -.+|.+.++..|..+.+.......++|++. -.++.+.+.|.
T Consensus 134 d~~i~l~~~~~~~~~R~~~R~~~~~~~~~d~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~vId~~----~~~~~v~~~i~ 208 (214)
T 1gtv_A 134 DWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGAVYAELAAQGWGGRWLVVGAD----VDPGRLAATLA 208 (214)
T ss_dssp EEEEEEEEEHHHHHHHHHHHHHEBBEEEEEEEEE-EHHHHHHHHHHHHHHHHEEEEEEEEEEEEE----EBHHHHHHHHC
T ss_pred CEEEEEeCCHHHHHHHHHcccccccccccccccc-cHHHHHHHHHHHHHHHHhCCCCCEEEEeCC----CCHHHHHHHhc
Confidence 678999999999999988887542222 1 111 135566677777776543221223777752 34566666554
No 141
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=80.20 E-value=1.7 Score=36.98 Aligned_cols=52 Identities=23% Similarity=0.195 Sum_probs=26.1
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCC
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRG 63 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~ 63 (298)
..||+.+++...+.+|+. .||+.-++.+.+..+...|..+ ....||+||.+.
T Consensus 142 ~~v~v~~~~~~~l~~Rl~----~R~~~~~~~i~~rl~~~~~~~~-----~~~~~d~vI~n~ 193 (231)
T 3lnc_A 142 VSIFIMPPSMEELRRRLC----GRRADDSEVVEARLKGAAFEIS-----HCEAYDYVIVNE 193 (231)
T ss_dssp EEEEEECSCHHHHHHC------------------CHHHHHHHHT-----TGGGSSEEEECS
T ss_pred EEEEEECCcHHHHHHHHH----HcCCCCHHHHHHHHHHHHHHHh-----hhcCCeEEEECc
Confidence 468888877777777663 3454444445444554555433 357899999864
No 142
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=79.96 E-value=4.7 Score=34.33 Aligned_cols=21 Identities=14% Similarity=0.033 Sum_probs=18.4
Q ss_pred CeEEEEeCCchhHHHhhhhcc
Q 022342 2 NMKIFVDTDADVRLARRIRRD 22 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD 22 (298)
|+.||+++|.++.+.|-..|.
T Consensus 124 d~vi~L~~~~e~~~~Rl~~R~ 144 (233)
T 1ak2_A 124 DSVIEFSIPDSLLIRRITGRL 144 (233)
T ss_dssp CEEEEEECCHHHHHHHHHTCE
T ss_pred CEEEEEECCHHHHHHHHHcCC
Confidence 789999999999998877774
No 143
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=75.87 E-value=5.8 Score=31.83 Aligned_cols=18 Identities=22% Similarity=0.145 Sum_probs=15.2
Q ss_pred EEEeCCchhHHHhhhhcc
Q 022342 5 IFVDTDADVRLARRIRRD 22 (298)
Q Consensus 5 ifvd~d~d~rl~Rri~RD 22 (298)
||+++|.++++.|-..|.
T Consensus 109 i~l~~~~e~~~~R~~~R~ 126 (183)
T 2vli_A 109 FTLIAPLNVVLERLRRDG 126 (183)
T ss_dssp EEEECCHHHHHHHHHTC-
T ss_pred EEEeCCHHHHHHHHHhcc
Confidence 999999999988877774
No 144
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=75.11 E-value=3.9 Score=34.23 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=19.8
Q ss_pred CCeEEEEeCCchhHHHhhhhccc
Q 022342 1 MNMKIFVDTDADVRLARRIRRDT 23 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~ 23 (298)
.|+.||+++|.++++.|...|..
T Consensus 103 ~d~vi~l~~~~e~~~~R~~~R~~ 125 (214)
T 1e4v_A 103 VDYVLEFDVPDELIVDRIVGRRV 125 (214)
T ss_dssp CSEEEEEECCHHHHHHHHHTEEE
T ss_pred CCEEEEEECCHHHHHHHHHCCcc
Confidence 37899999999999999887763
No 145
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=74.99 E-value=3 Score=33.79 Aligned_cols=18 Identities=28% Similarity=0.422 Sum_probs=15.0
Q ss_pred CeEEEEeCCchhHHHhhh
Q 022342 2 NMKIFVDTDADVRLARRI 19 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri 19 (298)
|+.||+++|.++++.|-.
T Consensus 106 ~~~i~l~~~~e~~~~R~~ 123 (179)
T 2pez_A 106 FFEVFVDAPLHVCEQRDV 123 (179)
T ss_dssp EEEEEEECCHHHHHHHCT
T ss_pred eEEEEEeCCHHHHHHHHh
Confidence 478999999999988743
No 146
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=73.80 E-value=8.3 Score=32.26 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=19.0
Q ss_pred CCeEEEEeCCchhHHHhhhhcc
Q 022342 1 MNMKIFVDTDADVRLARRIRRD 22 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD 22 (298)
.|+.||+++|.++.+.|-..|.
T Consensus 112 ~d~vi~L~~~~e~~~~R~~~r~ 133 (220)
T 1aky_A 112 LEKAIELKVDDELLVARITGRL 133 (220)
T ss_dssp CCEEEEEECCHHHHHHHHHTEE
T ss_pred CCEEEEEECCHHHHHHHHhCCC
Confidence 3689999999999999887775
No 147
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=70.94 E-value=2.3 Score=34.77 Aligned_cols=17 Identities=18% Similarity=0.378 Sum_probs=14.3
Q ss_pred CeEEEEeCCchhHHHhh
Q 022342 2 NMKIFVDTDADVRLARR 18 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rr 18 (298)
++.||+++|.++++.|-
T Consensus 114 ~~~v~L~~~~e~~~~R~ 130 (186)
T 2yvu_A 114 FLEIYVKASLEEVIRRD 130 (186)
T ss_dssp EEEEEEECCHHHHHHHC
T ss_pred eEEEEEeCCHHHHHHhh
Confidence 57899999999998763
No 148
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=70.74 E-value=11 Score=31.84 Aligned_cols=69 Identities=10% Similarity=0.103 Sum_probs=48.9
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHT 79 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~ 79 (298)
.++|+.++.-..|.+++. .++++.++.+.++....++... +.+ ..+||.||.+. +...|+..+.+.|..
T Consensus 139 ~~~ll~~~~~~~Lde~~~----~~d~~~~~~i~~~l~~~~~~~~-~~h--~~~~d~iiv~~-~~~ea~~~~~~ii~~ 207 (218)
T 1z6g_A 139 LYIFIKPPSTDVLLSRLL----TRNTENQEQIQKRMEQLNIELH-EAN--LLNFNLSIIND-DLTLTYQQLKNYLLN 207 (218)
T ss_dssp EEEEEECSCHHHHHHHHH----HTCCCCHHHHHHHHHHHHHHHH-HHT--TSCCSEEEECS-SHHHHHHHHHHHHHH
T ss_pred EEEEEeCcCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHHH-hhc--ccCCCEEEECC-CHHHHHHHHHHHHHH
Confidence 679999888888888764 6777777777777766776655 444 37899988763 455677666666654
No 149
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=70.06 E-value=2.4 Score=35.61 Aligned_cols=16 Identities=25% Similarity=0.472 Sum_probs=14.3
Q ss_pred CeEEEEeCCchhHHHh
Q 022342 2 NMKIFVDTDADVRLAR 17 (298)
Q Consensus 2 d~kifvd~d~d~rl~R 17 (298)
|+.||+|+|.++++.|
T Consensus 133 ~~vi~Ld~~~e~~~~R 148 (211)
T 1m7g_A 133 FVEVYVDVPVEVAEQR 148 (211)
T ss_dssp EEEEEEECCHHHHHTS
T ss_pred eEEEEEeCCHHHHHHh
Confidence 5789999999999877
No 150
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=66.33 E-value=8.1 Score=32.66 Aligned_cols=21 Identities=24% Similarity=0.186 Sum_probs=18.6
Q ss_pred CeEEEEeCCchhHHHhhhhcc
Q 022342 2 NMKIFVDTDADVRLARRIRRD 22 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD 22 (298)
|+.||+++|.++.+.|-..|.
T Consensus 107 d~vi~l~~~~e~~~~Rl~~R~ 127 (223)
T 2xb4_A 107 NFVIEILLPREVAKNRIMGRR 127 (223)
T ss_dssp CEEEEEECCHHHHHHHHHTBC
T ss_pred CEEEEEECCHHHHHHHHHccc
Confidence 689999999999998887775
No 151
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=64.93 E-value=7.3 Score=33.58 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=19.7
Q ss_pred CCeEEEEeCCchhHHHhhhhccc
Q 022342 1 MNMKIFVDTDADVRLARRIRRDT 23 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~ 23 (298)
.|..||+++|.++++.|-..|..
T Consensus 136 ~d~vi~l~~p~e~~~~Rl~~R~~ 158 (243)
T 3tlx_A 136 LDGVFYFNVPDEVLVNRISGRLI 158 (243)
T ss_dssp CCEEEEEECCHHHHHHHHHTEEE
T ss_pred CceEEEEeCCHHHHHHHHHcCCC
Confidence 37889999999999999888863
No 152
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=63.57 E-value=6.3 Score=33.95 Aligned_cols=78 Identities=18% Similarity=0.373 Sum_probs=42.5
Q ss_pred CCeEEEEeCCchhHHHhhhhcccc-cCCCCHHHHH----HHHHhhhhhHHHhhcccccccce-EEecCCCCCchhHHHHH
Q 022342 1 MNMKIFVDTDADVRLARRIRRDTV-ERGRDVDSVL----EQYAKFVKPAFDDFVLPSKKYAD-VIIPRGGDNHVAIDLIV 74 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~~-ergr~~~~v~----~~~~~~~~p~~~~~i~P~~~~AD-iii~~~~~~~~~~~~i~ 74 (298)
.|+.||+++|.++.+.|-..|-.. .|-.|-++++ +.|.+...|--+-| + +.-- +.|++.+ .++.|.
T Consensus 133 ~~~vi~l~v~~e~~~~Rl~~R~~~~~R~DD~~e~i~~Rl~~Y~~~t~pl~~~Y-~---~~~~l~~Idg~~----~~eeV~ 204 (217)
T 3umf_A 133 CLCVINFDVSEEVMRKRLLKRAETSNRVDDNEETIVKRFRTFNELTKPVIEHY-K---QQNKVITIDASG----TVDAIF 204 (217)
T ss_dssp CSEEEEEECCHHHHHHHHSCC------CHHHHHHHHHHHHHHHHHTHHHHHHH-H---TTTCEEEEETTS----CHHHHH
T ss_pred cCEEEeccCCHHHHHHHHhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-H---hcCCEEEEECCC----CHHHHH
Confidence 378899999999988777666332 1333333333 34555555543333 1 1111 3455522 466777
Q ss_pred HHHhhhcccccc
Q 022342 75 QHIHTKLGQHDL 86 (298)
Q Consensus 75 ~~i~~~l~~~~l 86 (298)
+.|.+.|++.++
T Consensus 205 ~~I~~~l~k~G~ 216 (217)
T 3umf_A 205 DKVNHELQKFGV 216 (217)
T ss_dssp HHHHHHHHTTTC
T ss_pred HHHHHHHHHcCC
Confidence 777777766553
No 153
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=62.16 E-value=19 Score=30.15 Aligned_cols=67 Identities=15% Similarity=0.258 Sum_probs=40.3
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHH
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (298)
+.||+.+|+...|.+|+. .||++-++.+++-+...+-... +- .....|.||-| .+-..|.+.+.+-|
T Consensus 116 ~~Ifi~pps~e~L~~RL~----~Rg~e~~e~i~~Rl~~a~~e~~-~~--~~~~fD~vIvN-ddle~a~~~l~~iI 182 (186)
T 1ex7_A 116 RFLFIAPPSVEDLKKRLE----GRGTETEESINKRLSAAQAELA-YA--ETGAHDKVIVN-DDLDKAYKELKDFI 182 (186)
T ss_dssp EEEEEECSCHHHHHHHHH----HHCCSCHHHHHHHHHHHHHHHH-HH--TTTCSSEEEEC-SSHHHHHHHHHHHH
T ss_pred eEEEEeCCCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHHh-hc--cccCCcEEEEC-cCHHHHHHHHHHHH
Confidence 469999999999999985 4787777766654443332222 11 12345777765 23344555554444
No 154
>1p6x_A Thymidine kinase; P-loop, LID, transferase; HET: THM; 2.00A {Equid herpesvirus 4} SCOP: c.37.1.1 PDB: 1p72_A* 1p73_A* 1p75_A*
Probab=61.19 E-value=2.9 Score=38.69 Aligned_cols=45 Identities=9% Similarity=0.049 Sum_probs=31.4
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhccc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLP 51 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P 51 (298)
|+.||+|+|.++.+.|--.| ||+.|.+-..|++.++-.|.++..-
T Consensus 159 DLtIyLd~~pe~~l~RI~~R-----gR~~Eri~~eyl~~vr~~Y~~l~~~ 203 (334)
T 1p6x_A 159 GNIVVTTLNVEEHIRRLRTR-----ARIGEQIDITLIATLRNVYFMLVNT 203 (334)
T ss_dssp EEEEEEECCHHHHHHHHHHH-----SCTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHhc-----CCCcccCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999884344 3332222236777788888887643
No 155
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=58.27 E-value=9.7 Score=31.77 Aligned_cols=65 Identities=20% Similarity=0.165 Sum_probs=30.1
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHH
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 77 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i 77 (298)
..||+.+++...+.+|+. .||++-++.+.......+... +....+|++|.|. +...+.+.+.+.|
T Consensus 122 ~~i~i~~ps~~~l~~Rl~----~R~~~~~e~i~~Rl~~~~~e~-----~~~~~~d~vivN~-~~~~~~~~l~~~i 186 (208)
T 3tau_A 122 IFIFLTPPDLSELKNRII----GRGTESMEVVEERMETAKKEI-----EMMASYDYAVVND-VVANAVQKIKGIV 186 (208)
T ss_dssp EEEEEECTTTTTSSCC-----------CCHHHHHHHHHHHHHH-----HHGGGSSEEEECS-SHHHHHHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHH----hcCCCCHHHHHHHHHHHHHHH-----HhhccCCEEEECc-CHHHHHHHHHHHH
Confidence 568999886555555543 455433344433333333321 2235789888763 2223344444433
No 156
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=57.02 E-value=8.9 Score=31.28 Aligned_cols=25 Identities=12% Similarity=0.239 Sum_probs=15.7
Q ss_pred cccceEEecCCCCCchhHHHHHHHHhhhcc
Q 022342 53 KKYADVIIPRGGDNHVAIDLIVQHIHTKLG 82 (298)
Q Consensus 53 ~~~ADiii~~~~~~~~~~~~i~~~i~~~l~ 82 (298)
...||++|.+. .++.+.+.|.+.+.
T Consensus 161 ~~~~d~vI~n~-----~~e~~~~~i~~~l~ 185 (207)
T 2j41_A 161 MNLYDYVVVND-----EVELAKNRIQCIVE 185 (207)
T ss_dssp GGGCSEEEECS-----SHHHHHHHHHHHHH
T ss_pred cccCCEEEECC-----CHHHHHHHHHHHHH
Confidence 46799999874 25555555555543
No 157
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=52.29 E-value=43 Score=27.72 Aligned_cols=22 Identities=23% Similarity=0.238 Sum_probs=19.0
Q ss_pred CeEEEEeCCchhHHHhhhhccc
Q 022342 2 NMKIFVDTDADVRLARRIRRDT 23 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~ 23 (298)
|+.||+++|.++.+.|-..|..
T Consensus 113 d~vi~L~~~~e~~~~Rl~~R~~ 134 (217)
T 3be4_A 113 TSVIYFEIDDSEIIERISGRCT 134 (217)
T ss_dssp CEEEEEECCHHHHHHHHHTEEE
T ss_pred CEEEEEECCHHHHHHHHHcCCC
Confidence 7899999999999998877753
No 158
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=51.85 E-value=16 Score=31.87 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=28.2
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKP 43 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p 43 (298)
+.||+++|.++++.|-..|.. +..+.+.+.++|.+...|
T Consensus 108 ~~i~l~~~~e~~~~R~~~R~~--~~~~~e~i~~~~~~~~~~ 146 (301)
T 1ltq_A 108 EHKVFDVPWTELVKRNSKRGT--KAVPIDVLRSMYKSMREY 146 (301)
T ss_dssp EEEECCCCHHHHHHHHHHCGG--GCCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHhccC--CCCCHHHHHHHHHHHhcc
Confidence 679999999999999888864 344566666666654444
No 159
>3ix9_A Dihydrofolate reductase; central beta sheet surrounded by 4 alpha helices, oxidoreductase; HET: NDP MTX; 1.95A {Streptococcus pneumoniae}
Probab=49.94 E-value=46 Score=27.95 Aligned_cols=53 Identities=11% Similarity=0.264 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhhccCC
Q 022342 224 NSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 296 (298)
Q Consensus 224 ~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR~fgt 296 (298)
+++..|++.|++.| ++|.+ +.+.+=.+.+....+ +++.. ++|..|+ ||++|..
T Consensus 101 ~~~~eal~~lk~~~---~~i~V---iGG~~ly~~~l~liD--el~lt-----------~ip~~g~-Gd~lFp~ 153 (190)
T 3ix9_A 101 HDVQSVLDWYSAQE---KNLYI---VGGKQIFQAFEPYLD--EVIVT-----------HIHARVE-GDTYFPA 153 (190)
T ss_dssp SSHHHHHHHHHTSC---SCEEE---EECHHHHHHHGGGCS--EEEEE-----------EESSCCC-CSEECCC
T ss_pred CCHHHHHHHHHhCC---CCEEE---ECCHHHHHHHHhhCC--EEEEE-----------EeCcccc-cCCcCCC
Confidence 46888999998763 45544 456655566655455 45544 3454543 6777753
No 160
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=49.92 E-value=3 Score=41.40 Aligned_cols=16 Identities=13% Similarity=0.027 Sum_probs=14.5
Q ss_pred eEEEEeCCchhHHHhh
Q 022342 3 MKIFVDTDADVRLARR 18 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rr 18 (298)
+.||+++|.++++.|+
T Consensus 498 ~~V~Lda~~ev~~~R~ 513 (573)
T 1m8p_A 498 FLVHVATPLEHCEQSD 513 (573)
T ss_dssp EEEEECCCHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHh
Confidence 7899999999999884
No 161
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=44.75 E-value=22 Score=29.20 Aligned_cols=16 Identities=31% Similarity=0.480 Sum_probs=14.1
Q ss_pred eEEEEeCCchhHHHhh
Q 022342 3 MKIFVDTDADVRLARR 18 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rr 18 (298)
+.||+++|.+++..|+
T Consensus 125 ~~v~L~a~~e~~~~R~ 140 (200)
T 3uie_A 125 VEVFMDVPLSVCEARD 140 (200)
T ss_dssp EEEEECCCHHHHHHHC
T ss_pred EEEEEeCCHHHHHHhc
Confidence 4699999999998886
No 162
>1osn_A Thymidine kinase, VZV-TK; chickenpox, BVDU-MP, transferase; HET: BVP ADP; 3.20A {Human herpesvirus 3} SCOP: c.37.1.1
Probab=44.46 E-value=8.7 Score=35.59 Aligned_cols=44 Identities=11% Similarity=0.167 Sum_probs=28.3
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVL 50 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~ 50 (298)
|+.||+|.|.++.+.|--.| ||+.+.+=..|++.++-.|..+..
T Consensus 168 DltI~Ld~~pe~~l~RI~~R-----gR~~Erie~~yl~rvr~~Y~~l~~ 211 (341)
T 1osn_A 168 TNLVVCTVSLPSHLSRVSKR-----ARPGETVNLPFVMVLRNVYIMLIN 211 (341)
T ss_dssp CEEEEEECCHHHHHHHCC-----------CCCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHhh-----CCCcccCCHHHHHHHHHHHHHHHH
Confidence 88999999999998874333 322111113677778888888764
No 163
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=44.29 E-value=21 Score=28.14 Aligned_cols=37 Identities=16% Similarity=0.150 Sum_probs=25.0
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFV 41 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~ 41 (298)
..||+++|.++++.|-..|... ..+.+.+..+|....
T Consensus 108 ~~i~l~~~~~~~~~R~~~R~~~--~~~~~~i~~~~~~~~ 144 (181)
T 1ly1_A 108 EHKVFDVPWTELVKRNSKRGTK--AVPIDVLRSMYKSMR 144 (181)
T ss_dssp EEEECCCCHHHHHHHHTTCGGG--CCCHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHhccccC--CCCHHHHHHHHHHhh
Confidence 5799999999999988877642 334444445444433
No 164
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=39.87 E-value=69 Score=23.39 Aligned_cols=45 Identities=20% Similarity=0.230 Sum_probs=34.2
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCC
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPS 264 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~ 264 (298)
++.|++.+ .+|.....|...|++.|. +++.+ -..|+..+.++...
T Consensus 52 ~~~ivvyc---~~g~rs~~a~~~L~~~G~--~~v~~-----l~GG~~~W~~~g~~ 96 (106)
T 3hix_A 52 SRDIYVYG---AGDEQTSQAVNLLRSAGF--EHVSE-----LKGGLAAWKAIGGP 96 (106)
T ss_dssp TSCEEEEC---SSHHHHHHHHHHHHHTTC--SCEEE-----CTTHHHHHHHTTCC
T ss_pred CCeEEEEE---CCCChHHHHHHHHHHcCC--cCEEE-----ecCCHHHHHHCCCC
Confidence 46677765 479999999999999999 46543 35789988887653
No 165
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=39.44 E-value=38 Score=28.52 Aligned_cols=23 Identities=13% Similarity=0.260 Sum_probs=19.1
Q ss_pred CCeEEEEeCCchhHHHhhhhccc
Q 022342 1 MNMKIFVDTDADVRLARRIRRDT 23 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~ 23 (298)
+|..||+++|.++.+.|-..|-+
T Consensus 104 ~~~vi~l~v~~e~l~~Rl~~R~~ 126 (206)
T 3sr0_A 104 VDHVLLFEVPDEVVIERLSGRRI 126 (206)
T ss_dssp CCEEEEEECCHHHHHHHHHTEEE
T ss_pred cceeeecCCCHHHHHHHHhCCcc
Confidence 46789999999999888877743
No 166
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=38.21 E-value=74 Score=24.89 Aligned_cols=19 Identities=26% Similarity=0.244 Sum_probs=14.0
Q ss_pred eEEEEeCCchhHHHhhhhc
Q 022342 3 MKIFVDTDADVRLARRIRR 21 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~R 21 (298)
..||+++|.+++..|-..|
T Consensus 115 ~~v~l~~~~e~l~~R~~~r 133 (178)
T 1qhx_A 115 LWVGVRCDGAVAEGRETAR 133 (178)
T ss_dssp EEEEEECCHHHHHHHHHHT
T ss_pred EEEEEECCHHHHHHHHHhh
Confidence 4678999988877665555
No 167
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=37.93 E-value=20 Score=35.06 Aligned_cols=70 Identities=16% Similarity=0.247 Sum_probs=34.3
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhcc
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLG 82 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l~ 82 (298)
+.||+++|.++++.|- .|.... .+....+.++.. ++ +.|-+| +.||++|++.+. .++.+.+.|.+.+.
T Consensus 472 ~vV~L~~~~e~~~~Rl-~r~~~~--~~~~~~i~~~~~-vr---~~~e~~--~~adivIDts~~---s~eev~~~I~~~L~ 539 (546)
T 2gks_A 472 IEVFVDAPVEVCEERD-VKGLYK--KAKEGLIKGFTG-VD---DPYEPP--VAPEVRVDTTKL---TPEESALKILEFLK 539 (546)
T ss_dssp EEEEEECCGGGHHHHC-CSSHHH--HC------CCBT-TT---BCCCCC--SSCSEEEETTTS---CHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHh-hccccc--cccHHHHHHHHh-hh---hccccc--cCCcEEEECCCC---CHHHHHHHHHHHHH
Confidence 6899999999987763 332100 011112222221 11 123333 578999987432 24455555555544
Q ss_pred cc
Q 022342 83 QH 84 (298)
Q Consensus 83 ~~ 84 (298)
++
T Consensus 540 ~~ 541 (546)
T 2gks_A 540 KE 541 (546)
T ss_dssp HH
T ss_pred Hc
Confidence 43
No 168
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=36.80 E-value=47 Score=28.28 Aligned_cols=63 Identities=16% Similarity=0.106 Sum_probs=36.9
Q ss_pred EEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCc---hhHHHHHHHHhhh
Q 022342 4 KIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNH---VAIDLIVQHIHTK 80 (298)
Q Consensus 4 kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~---~~~~~i~~~i~~~ 80 (298)
.|+|.++.++|+.|-. ...+|++-.+ -+.=+.+. ..||++|.|.+... ..++.++..++..
T Consensus 130 iirI~as~~~R~~Rg~---~~~~~~Dd~e------------sE~gL~~~-~~~D~vI~Ndgt~eel~~~v~~ll~~~~~~ 193 (202)
T 3ch4_B 130 TVRVVALEQSRQQRGW---VFTPGVDDAE------------SECGLDNF-GDFDWVIENHGVEQRLEEQLENLIEFIRSR 193 (202)
T ss_dssp EEEEEECHHHHHHTTC---CCCTTTTTSH------------HHHTTTTC-CCCSEEEEECSCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCHHHHHHHhh---hccccccccc------------cccCCCCC-CcCCEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 5899999999999931 1123344211 13334555 78999999865432 1234455555555
Q ss_pred cc
Q 022342 81 LG 82 (298)
Q Consensus 81 l~ 82 (298)
|.
T Consensus 194 ~~ 195 (202)
T 3ch4_B 194 LK 195 (202)
T ss_dssp CC
T ss_pred Hh
Confidence 44
No 169
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=36.71 E-value=85 Score=26.36 Aligned_cols=22 Identities=18% Similarity=0.146 Sum_probs=17.8
Q ss_pred CCeEEEEeCCchhHHHhhhhcc
Q 022342 1 MNMKIFVDTDADVRLARRIRRD 22 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD 22 (298)
+|+.||+++|.++.+.|...|.
T Consensus 128 ~~~vi~L~~~~~~~l~r~~~r~ 149 (246)
T 2bbw_A 128 VDLVISLNIPFETLKDRLSRRW 149 (246)
T ss_dssp CCEEEEEECCHHHHHHHHHTEE
T ss_pred CCEEEEEECCHHHHHHHHHcCC
Confidence 3678999999999988766664
No 170
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=36.63 E-value=92 Score=26.55 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=32.1
Q ss_pred cchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCC
Q 022342 221 ATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVAL 276 (298)
Q Consensus 221 ATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l 276 (298)
.|-.++..|++..++.|+ ++|++++ ++.+.-.++.+.+.+++|++-.=..++
T Consensus 27 NT~~tl~la~era~e~~I--k~iVVAS--~sG~TA~k~~e~~~~i~lVvVTh~~GF 78 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGI--KHLVVAS--SYGDTAMKALEMAEGLEVVVVTYHTGF 78 (201)
T ss_dssp GHHHHHHHHHHHHHHHTC--CEEEEEC--SSSHHHHHHHHHCTTCEEEEEECCTTS
T ss_pred cHHHHHHHHHHHHHHcCC--CEEEEEe--CCChHHHHHHHHhcCCeEEEEeCcCCC
Confidence 477888888888888887 4554433 344444555556666776665543333
No 171
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=36.24 E-value=87 Score=28.48 Aligned_cols=74 Identities=18% Similarity=0.249 Sum_probs=51.3
Q ss_pred HHHHHHHHhccCCccceEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchH----HHHHHHHHHHHcCCCCccEEE
Q 022342 170 SMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGN----SANQAIQLLIEKGVPESHIIF 245 (298)
Q Consensus 170 ~m~~~~~~~~p~a~~g~i~i~R~~~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~----t~~~ai~~L~~~g~~~~~I~v 245 (298)
.+.+.+-+.+ +.+.|.+.+.|=++. ..|.+++.++.|+.|+|+=+....-+ .+.-.++.|++.|+ ++|.+
T Consensus 18 ~La~~ia~~l-g~~l~~~~~~~F~dG---E~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA--~rIt~ 91 (319)
T 3dah_A 18 ALAQEVVKIL-GIPLGKAMVSRFSDG---EIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASA--GRITA 91 (319)
T ss_dssp HHHHHHHHHH-TSCCCCEEEEECTTS---CEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTB--SEEEE
T ss_pred HHHHHHHHHh-CCceeeeEEEECCCC---CEEEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHHHcCC--cEEEE
Confidence 3444444433 667787777654332 34667888999999999977665433 35667888999998 79998
Q ss_pred EEEE
Q 022342 246 LNLI 249 (298)
Q Consensus 246 v~~v 249 (298)
+.+.
T Consensus 92 ViPY 95 (319)
T 3dah_A 92 AIPY 95 (319)
T ss_dssp EESS
T ss_pred EccC
Confidence 8864
No 172
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=36.08 E-value=72 Score=28.53 Aligned_cols=66 Identities=12% Similarity=0.223 Sum_probs=36.7
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+.|||.+|+--.|.+|+.| ||.+-.. ..+.+..+ ....| ..+.|.||.| .+...|.+.+.+.|...
T Consensus 212 i~IFI~PpS~e~L~~r~~~----r~~e~~~--~~~~r~~k-~e~e~----~~~fD~vIvN-ddle~a~~~l~~iI~~e 277 (292)
T 3tvt_A 212 VAVFIKPKSVDSVMEMNRR----MTEEQAK--KTYERAIK-MEQEF----GEYFTGVVQG-DTIEEIYSKVKSMIWSQ 277 (292)
T ss_dssp EEEEECCSCHHHHHHTCTT----SCTTHHH--HHHHHHHH-HHHHH----TTTCSEEECC-SSHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHhC----CCchhHH--HHHHHHHH-HHHhh----hhhCCEEEEC-cCHHHHHHHHHHHHHHh
Confidence 5799999998888877654 3333322 22222221 22333 3468988875 23344555555555543
No 173
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=35.46 E-value=39 Score=31.21 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=43.8
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhhcc
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLG 82 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~l~ 82 (298)
+.|||-+|+-..|.+|+. .||.+.+..++.-.....-.+ +-+....|.||-| .+-..|.+.+.+.|...+.
T Consensus 253 i~IFI~PPS~eeLe~RL~----~RGt~~~~rl~~al~~ae~E~----~~~~~~FDyvIVN-DdLe~A~~~L~~iI~~~~~ 323 (337)
T 4dey_A 253 IVVYVKISSPKVLQRLIK----SRGKSQAKHLNVQMVAADKLA----QCPPELFDVILDE-NQLEDACEHLADYLEAYWK 323 (337)
T ss_dssp EEEEECCSCHHHHHHHHH----TTCHHHHTTHHHHHHHHHHHH----HSCGGGCSEEECC-SSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHH----hCCchHHHHHHHHHHHHHHHH----hhCcccCCEEEEC-CCHHHHHHHHHHHHHHHHh
Confidence 579999999999999976 467655555544322122111 2223567888876 3344577777776666544
No 174
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=34.32 E-value=56 Score=23.84 Aligned_cols=44 Identities=25% Similarity=0.467 Sum_probs=32.5
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCC
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFP 263 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p 263 (298)
++.|++.. .+|.....|...|++.|. +++..+ ..|+..+.+++|
T Consensus 58 ~~~ivvyc---~~g~rs~~a~~~L~~~G~--~~v~~l-----~GG~~~W~~~~p 101 (108)
T 1gmx_A 58 DTPVMVMC---YHGNSSKGAAQYLLQQGY--DVVYSI-----DGGFEAWQRQFP 101 (108)
T ss_dssp TSCEEEEC---SSSSHHHHHHHHHHHHTC--SSEEEE-----TTHHHHHHHHCG
T ss_pred CCCEEEEc---CCCchHHHHHHHHHHcCC--ceEEEe-----cCCHHHHHHhCC
Confidence 56677765 478888899999999998 565533 467888777666
No 175
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=34.02 E-value=33 Score=29.94 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=42.0
Q ss_pred cccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHH---------hCCCcEEEEEeecCCCCCCCceeCCCCch
Q 022342 219 VLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCK---------RFPSLKIVTSEIDVALNEEFRVIPGLGEF 289 (298)
Q Consensus 219 ~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~---------~~p~v~i~~a~id~~l~~~~~ivPGlGD~ 289 (298)
.|.||.|+..+|+.|-++-.. +...+.++-+|...-+...+ ..|.+.++.-.-|+- |.+...+-|-|-+
T Consensus 26 GlGTGSTv~~~i~~L~~~~~~-~~l~i~~V~tS~~t~~~a~~~Gi~l~~l~~~~~iD~~iDGADEv-d~~l~lIKGGGga 103 (228)
T 4gmk_A 26 GLGTGSTVKYMVDALGKRVNE-EGLDIVGVTTSIRTAEQAKSLGIVIKDIDEVDHIDLTIDGADEI-SSDFQGIKGGGAA 103 (228)
T ss_dssp EECCSHHHHHHHHHHHHHHHH-HCCCCEEEESSHHHHHHHHHTTCCBCCGGGSSCEEEEEECCSEE-CTTSCEECCTTSC
T ss_pred EECchHHHHHHHHHHHHHHhh-cCCcEEEEeCcHHHHHHHHHcCCceeChHHCCccceEeccHHHh-hhchhhhhcchHH
Confidence 789999999999999553211 12234455455554444443 235567777665543 5566677776644
No 176
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=33.24 E-value=1.7e+02 Score=24.27 Aligned_cols=55 Identities=15% Similarity=0.372 Sum_probs=34.8
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEE
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKI 267 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i 267 (298)
+++++|+|. -+||+-=.+..+.|.+.|. ++++++.--..++.++.+.+.++..++
T Consensus 3 l~~k~vlVt---Gas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~~~~~~l~~~~~~~~~ 57 (254)
T 1sby_A 3 LTNKNVIFV---AALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNI 57 (254)
T ss_dssp CTTCEEEEE---TTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEE
T ss_pred CCCcEEEEE---CCCChHHHHHHHHHHHCCC--cEEEEEecCchHHHHHHHHHhCCCceE
Confidence 567888876 4567766777788888887 335444322233667777777654343
No 177
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=33.19 E-value=34 Score=33.57 Aligned_cols=67 Identities=16% Similarity=0.317 Sum_probs=22.4
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCc-hhHHHHHHHHh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNH-VAIDLIVQHIH 78 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~-~~~~~i~~~i~ 78 (298)
+.||+++|.+++..| ..|..-.+. ....+.++.....| |..| ..||++|+...... ..++.|++.++
T Consensus 471 ~~V~L~~~~e~~~~R-~~r~l~~~~--~~~~i~~l~~~r~~----~e~P--~~adl~Idt~~~s~~e~v~~Il~~L~ 538 (552)
T 3cr8_A 471 VEIHVATPIETCESR-DRKGLYAKA--RAGLIPEFTGVSDP----YEVP--ETPELAIDTTGLAIDEAVQQILLKLE 538 (552)
T ss_dssp EEEEECC--------------------------------CC----CCCC--SSCSEEECCSSCCHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHh-ccccccccc--cHhHHHHHHhcccc----ccCC--CCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 679999999988776 333322111 11123333322332 3344 46899998644332 23444444443
No 178
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=32.40 E-value=1.2e+02 Score=25.75 Aligned_cols=56 Identities=25% Similarity=0.447 Sum_probs=37.1
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH------HHHHHHHHhCCCcEEEEEeec
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP------EGIHCVCKRFPSLKIVTSEID 273 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~------~gl~~l~~~~p~v~i~~a~id 273 (298)
++.++|+||...++.. .++.|++.|. +| -.++.+- .|+..+.+.+|+++||+..-+
T Consensus 27 ~~~~ilID~g~~~~~~---~~~~l~~~g~---~i--~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~ 88 (245)
T 2gcu_A 27 DKPALLIDPVDKTVDR---DLKLIDELGL---KL--IYAMNTHVHADHVTGTGLLKTKLPGVKSVISKAS 88 (245)
T ss_dssp TCEEEEESCBGGGHHH---HHHHHHHHTC---EE--EEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGG
T ss_pred CCcEEEEeCCCchHHH---HHHHHHHCCC---ee--eEEEeCCCChhhhhhHHHHHHhCCCCeEEecccc
Confidence 4679999999865443 4455666676 23 3333332 477788877899999987543
No 179
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=32.23 E-value=1.1e+02 Score=25.61 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=38.9
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCC-CHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGR-DVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIH 78 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr-~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~ 78 (298)
..||+-++.--.+.+|+ ..||. +.+++...+.+ .+... +.....|.+|.| .+-..|.+.+.+.|.
T Consensus 131 ~tI~i~th~~~~l~~Rl----~~rG~~~~e~i~~rl~~-a~~e~-----~~~~~~d~~i~N-d~l~~a~~~l~~ii~ 196 (219)
T 1s96_A 131 RSIFILPPSKIELDRRL----RGRGQDSEEVIAKRMAQ-AVAEM-----SHYAEYDYLIVN-DDFDTALTDLKTIIR 196 (219)
T ss_dssp EEEEEECSSHHHHHHHH----HTTSCSCHHHHHHHHHH-HHHHH-----TTGGGSSEEEEC-SSHHHHHHHHHHHHH
T ss_pred EEEEEECCCHHHHHHHH----HHcCCCCHHHHHHHHHH-HHHHH-----hhccCCCEEEEC-cCHHHHHHHHHHHHH
Confidence 57899888777777776 46775 45555555544 22221 233567888876 333456666655554
No 180
>1c3p_A Protein (HDLP (histone deacetylase-like protein) ); alpha/beta fold, lyase; 1.80A {Aquifex aeolicus} SCOP: c.42.1.2 PDB: 1c3r_A* 1c3s_A*
Probab=32.08 E-value=40 Score=31.48 Aligned_cols=61 Identities=15% Similarity=0.239 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHcCCCCccEEEEEE-EeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchhhh
Q 022342 225 SANQAIQLLIEKGVPESHIIFLNL-ISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDR 292 (298)
Q Consensus 225 t~~~ai~~L~~~g~~~~~I~vv~~-vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~GdR 292 (298)
.+.-|++.|+++|. ++|.++=+ +=-.+|.+.+...-| +|.+.++... ..|+.||-|+..++
T Consensus 146 nvAiAa~~l~~~g~--~RV~IvD~DvHHGnGtq~iF~~dp--~Vl~~SiH~~---~~~ffPgtG~~~e~ 207 (375)
T 1c3p_A 146 NPAVGIEYLRKKGF--KRILYIDLDAHHCDGVQEAFYDTD--QVFVLSLHQS---PEYAFPFEKGFLEE 207 (375)
T ss_dssp HHHHHHHHHHHTTC--CCEEEEECSSSCCHHHHHHHTTCS--SEEEEEEEEC---TTTSTTSSSCCTTC
T ss_pred HHHHHHHHHHHhCC--CeEEEEecCCCCCHHHHHHhccCC--CEEEEecccC---CCCCCCCCCCcccc
Confidence 45567777888887 68766665 557789999999888 5555555542 35667888865443
No 181
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=31.92 E-value=62 Score=29.26 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=29.3
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNL 248 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~ 248 (298)
++++++|+|+ .+||+..+++..|.+.|+ ++|.+++-
T Consensus 145 ~l~gk~~lVl----GAGGaaraia~~L~~~G~--~~v~v~nR 180 (312)
T 3t4e_A 145 DMRGKTMVLL----GAGGAATAIGAQAAIEGI--KEIKLFNR 180 (312)
T ss_dssp CCTTCEEEEE----CCSHHHHHHHHHHHHTTC--SEEEEEEC
T ss_pred CcCCCEEEEE----CcCHHHHHHHHHHHHcCC--CEEEEEEC
Confidence 5778999876 469999999999999999 57776653
No 182
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=30.91 E-value=56 Score=28.87 Aligned_cols=55 Identities=16% Similarity=0.307 Sum_probs=36.9
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEE-Ee-CHHHHHHHHHhCCCcEE
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNL-IS-APEGIHCVCKRFPSLKI 267 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~-va-s~~gl~~l~~~~p~v~i 267 (298)
+.++++++| +.+||+..+++-.|.+.|+ ++|.+++- .. +.+-.+.+...+|.+.+
T Consensus 122 ~~~~~~~li----lGaGGaarai~~aL~~~g~--~~i~i~nRt~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 122 EPAGKRALV----IGCGGVGSAIAYALAEAGI--ASITLCDPSTARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CCTTCEEEE----ECCSHHHHHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHHCTTCEE
T ss_pred CcccCeEEE----EecHHHHHHHHHHHHHhCC--CeEEEeCCCHHHHHHHHHHHhccCCccee
Confidence 456788876 4789999999999999999 57777652 11 11223345556765543
No 183
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=30.73 E-value=84 Score=26.79 Aligned_cols=56 Identities=14% Similarity=0.215 Sum_probs=34.5
Q ss_pred cEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeC------HHHHHHHHHhCCCcEEEEEe
Q 022342 211 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA------PEGIHCVCKRFPSLKIVTSE 271 (298)
Q Consensus 211 ~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas------~~gl~~l~~~~p~v~i~~a~ 271 (298)
..++|+||... ......++.|++. ...++|.. ++.+ -.|+..+.+++|+++||+..
T Consensus 51 ~~~iLID~G~~--~~~~~~~~~l~~~-~~~~~i~~--IilTH~H~DH~gg~~~l~~~~~~~~v~~~~ 112 (262)
T 3hnn_A 51 DKTAIIDPPVE--SFMKIYLEALQQT-VNLKKLDY--VILGHFSPNRIPTFKALLELAPQITFVCSL 112 (262)
T ss_dssp SSEEEECCCCH--HHHHHHHHHHHHH-SCGGGEEE--EECSSCCGGGHHHHHHHHHHCTTCEEEECH
T ss_pred CCEEEEECCCc--chHHHHHHHHHHh-CChhhCCE--EEECCCCcchhchHHHHHHHCCCCEEEECH
Confidence 35899999765 2233344455543 22245532 2332 35888999999999999864
No 184
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=30.46 E-value=81 Score=25.95 Aligned_cols=52 Identities=19% Similarity=0.348 Sum_probs=31.0
Q ss_pred cEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCchh
Q 022342 211 RHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFG 290 (298)
Q Consensus 211 ~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~G 290 (298)
++|.|+|=....=.|+..| |++.|+. +. ++..++-++. .++-|+||-|+++
T Consensus 3 ~~I~iiD~g~~n~~si~~a---l~~~G~~---~~---v~~~~~~l~~--------------------~D~lilPG~g~~~ 53 (211)
T 4gud_A 3 QNVVIIDTGCANISSVKFA---IERLGYA---VT---ISRDPQVVLA--------------------ADKLFLPGVGTAS 53 (211)
T ss_dssp CCEEEECCCCTTHHHHHHH---HHHTTCC---EE---EECCHHHHHH--------------------CSEEEECCCSCHH
T ss_pred CEEEEEECCCChHHHHHHH---HHHCCCE---EE---EECCHHHHhC--------------------CCEEEECCCCCHH
Confidence 4688899655332555555 5667983 32 2445443221 2366889999887
Q ss_pred h
Q 022342 291 D 291 (298)
Q Consensus 291 d 291 (298)
+
T Consensus 54 ~ 54 (211)
T 4gud_A 54 E 54 (211)
T ss_dssp H
T ss_pred H
Confidence 6
No 185
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=30.41 E-value=58 Score=28.89 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=28.0
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 247 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~ 247 (298)
++++++|+|+ .+||...+++..|.+.|+ ++|.+++
T Consensus 124 ~l~~k~vlVl----GaGG~g~aia~~L~~~G~--~~v~i~~ 158 (283)
T 3jyo_A 124 NAKLDSVVQV----GAGGVGNAVAYALVTHGV--QKLQVAD 158 (283)
T ss_dssp TCCCSEEEEE----CCSHHHHHHHHHHHHTTC--SEEEEEC
T ss_pred CcCCCEEEEE----CCcHHHHHHHHHHHHCCC--CEEEEEE
Confidence 5778999877 358988999999999998 5676654
No 186
>3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A*
Probab=29.97 E-value=1.4e+02 Score=23.99 Aligned_cols=45 Identities=0% Similarity=0.051 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEEeecCCC
Q 022342 225 SANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVAL 276 (298)
Q Consensus 225 t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a~id~~l 276 (298)
++..+++.|++.+. ++|. ++.+.+=.+.+....+ +++...|+..+
T Consensus 78 ~~~~~l~~lk~~~~--~~i~---viGG~~l~~~~l~l~D--el~lT~i~~~~ 122 (162)
T 3dfr_A 78 DVAAVFAYAKQHLD--QELV---IAGGAQIFTAFKDDVD--TLLVTRLAGSF 122 (162)
T ss_dssp SHHHHHHHHHHCCS--SCEE---ECCCHHHHHHTGGGCC--EEEEEEESSCC
T ss_pred CHHHHHHHHhcCCC--CCEE---EECCHHHHHHHHhhCC--EEEEEEecccc
Confidence 68889999998754 4553 4455555555554445 67777777766
No 187
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=29.88 E-value=56 Score=28.10 Aligned_cols=60 Identities=18% Similarity=0.258 Sum_probs=41.3
Q ss_pred eccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEE
Q 022342 201 YEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVT 269 (298)
Q Consensus 201 y~klP~~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~ 269 (298)
|..+--+++|+.|+|+ ..|......++.|.+.|+ +|++++.=.++ .++.+.+. .+++++.
T Consensus 22 ~~Pifl~L~gk~VLVV----GgG~va~~ka~~Ll~~GA---~VtVvap~~~~-~l~~l~~~-~~i~~i~ 81 (223)
T 3dfz_A 22 MYTVMLDLKGRSVLVV----GGGTIATRRIKGFLQEGA---AITVVAPTVSA-EINEWEAK-GQLRVKR 81 (223)
T ss_dssp CCEEEECCTTCCEEEE----CCSHHHHHHHHHHGGGCC---CEEEECSSCCH-HHHHHHHT-TSCEEEC
T ss_pred ccccEEEcCCCEEEEE----CCCHHHHHHHHHHHHCCC---EEEEECCCCCH-HHHHHHHc-CCcEEEE
Confidence 3333347889999987 468888999999999998 57777764443 46666654 3455443
No 188
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=29.74 E-value=1.4e+02 Score=27.14 Aligned_cols=73 Identities=10% Similarity=0.119 Sum_probs=49.7
Q ss_pred HHHHHHHhccCCccceEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchH----HHHHHHHHHHHcCCCCccEEEE
Q 022342 171 MENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGN----SANQAIQLLIEKGVPESHIIFL 246 (298)
Q Consensus 171 m~~~~~~~~p~a~~g~i~i~R~~~t~~~~~y~klP~~i~~~~Vil~Dp~lATG~----t~~~ai~~L~~~g~~~~~I~vv 246 (298)
+.+.+-+.+ +++.|.+.+.|=++. ..|.+++.++.|+.|+++=++...=+ .+.-.++.+++.|+ ++|.++
T Consensus 15 La~~ia~~l-g~~l~~~~~~~F~dG---E~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA--~rIt~V 88 (326)
T 3s5j_B 15 LSQKIADRL-GLELGKVVTKKFSNQ---ETCVEIGESVRGEDVYIVQSGCGEINDNLMELLIMINACKIASA--SRVTAV 88 (326)
T ss_dssp HHHHHHHHT-TCCCCCEEEEECTTS---CEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTC--SEEEEE
T ss_pred HHHHHHHHh-CCceeeeEEeECCCC---CEEEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHHHHHhcCC--cEEEEe
Confidence 334433333 567777776654332 34677888999999999988765422 45567788898999 799988
Q ss_pred EEE
Q 022342 247 NLI 249 (298)
Q Consensus 247 ~~v 249 (298)
.+.
T Consensus 89 iPY 91 (326)
T 3s5j_B 89 IPC 91 (326)
T ss_dssp ESS
T ss_pred ccC
Confidence 864
No 189
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=29.73 E-value=18 Score=36.22 Aligned_cols=68 Identities=12% Similarity=0.329 Sum_probs=35.2
Q ss_pred CeEEEEeCCchhHHHhhhhcccc-cCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCC-chhHHHHHHHHhh
Q 022342 2 NMKIFVDTDADVRLARRIRRDTV-ERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDN-HVAIDLIVQHIHT 79 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~-ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~-~~~~~~i~~~i~~ 79 (298)
++.||+++|.++++.|..++... .|... +..|. .+++.|+. | ..+|++|+....+ ....+.|++.+..
T Consensus 153 ~~vV~Ldap~Evl~~Rl~r~ly~~aR~~~----~~~~~-~~~~~Ye~---p--~~~dlvIDts~~s~eevv~~Il~~L~~ 222 (630)
T 1x6v_B 153 FFEVFVDAPLHVCEQRDVKGLYKKARAGE----IKGFT-GIDSEYEK---P--EAPELVLKTDSCDVNDCVQQVVELLQE 222 (630)
T ss_dssp EEEEEEECCHHHHHHHCTTSHHHHHTTC--------CB-TTTBCCCC---C--SSCSEEEETTSSCHHHHHHHHHHHHHH
T ss_pred eEEEEEECCHHHHHHHhccccchhhhhhh----HHHHH-Hhhhhhcc---c--CCCcEEEECCCCCHHHHHHHHHHHHHh
Confidence 46899999999998775422111 12111 11222 24444332 3 5789999875432 2334455555543
No 190
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=29.66 E-value=88 Score=21.59 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=24.3
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEE
Q 022342 209 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFL 246 (298)
Q Consensus 209 ~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv 246 (298)
+++.|++.. .+|.....|...|++.|. +++.++
T Consensus 40 ~~~~ivv~C---~~g~rs~~aa~~L~~~G~--~~v~~l 72 (85)
T 2jtq_A 40 KNDTVKVYC---NAGRQSGQAKEILSEMGY--THVENA 72 (85)
T ss_dssp TTSEEEEEE---SSSHHHHHHHHHHHHTTC--SSEEEE
T ss_pred CCCcEEEEc---CCCchHHHHHHHHHHcCC--CCEEec
Confidence 356666665 468888889999999998 466543
No 191
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=29.64 E-value=95 Score=26.73 Aligned_cols=52 Identities=17% Similarity=0.345 Sum_probs=35.6
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH------HHHHHHHHhCCCcEEEEEe
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP------EGIHCVCKRFPSLKIVTSE 271 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~------~gl~~l~~~~p~v~i~~a~ 271 (298)
++..+|+||. .+. ..++.|++.|. +| -.++.+- .|+..+.+.+|+++||+..
T Consensus 22 ~~~~vlID~G--~~~---~i~~~l~~~g~---~i--~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~ 79 (260)
T 1qh5_A 22 TKEAAIVDPV--QPQ---KVVDAARKHGV---KL--TTVLTTHHHWDHAGGNEKLVKLESGLKVYGGD 79 (260)
T ss_dssp TTEEEEESCS--SHH---HHHHHHHHHTC---EE--EEEECCCSSHHHHTTHHHHHHHSTTCEEEESC
T ss_pred CCEEEEEcCC--CHH---HHHHHHHHcCC---Cc--cEEEeCCCCccccCCHHHHHHHCCCCEEEECc
Confidence 4678999997 333 34556666676 23 3444432 4788899999999999864
No 192
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=28.27 E-value=87 Score=29.23 Aligned_cols=58 Identities=12% Similarity=0.094 Sum_probs=36.2
Q ss_pred CcEEEEEcCcccchHHHHH--HHHHHHHcCCCCccEEEEEEEeC-HHHHHHHHHhCCCcEEEE
Q 022342 210 ERHVLLLDPVLATGNSANQ--AIQLLIEKGVPESHIIFLNLISA-PEGIHCVCKRFPSLKIVT 269 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~--ai~~L~~~g~~~~~I~vv~~vas-~~gl~~l~~~~p~v~i~~ 269 (298)
++.+||.||| .+|.|+.+ ++..++..+.. .++.++|+.+- .+=.+.+.+.+|+.++.+
T Consensus 56 ~~~~ilad~~-GlGKT~~ai~~i~~~~~~~~~-~~~LIv~P~~l~~qw~~e~~~~~~~~~v~~ 116 (500)
T 1z63_A 56 GFGICLADDM-GLGKTLQTIAVFSDAKKENEL-TPSLVICPLSVLKNWEEELSKFAPHLRFAV 116 (500)
T ss_dssp TCCEEECCCT-TSCHHHHHHHHHHHHHHTTCC-SSEEEEECSTTHHHHHHHHHHHCTTSCEEE
T ss_pred CCCEEEEeCC-CCcHHHHHHHHHHHHHhcCCC-CCEEEEccHHHHHHHHHHHHHHCCCceEEE
Confidence 4678888887 56999764 34455555543 57888887332 233456666677765544
No 193
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=27.93 E-value=66 Score=24.16 Aligned_cols=67 Identities=16% Similarity=0.136 Sum_probs=42.1
Q ss_pred ccceEEecCCCCCchhH-----------------HHHHHHHhhhccccccccCCCceeeccchHHHHHHhHhh-hcCCCC
Q 022342 54 KYADVIIPRGGDNHVAI-----------------DLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLI-RDRGIS 115 (298)
Q Consensus 54 ~~ADiii~~~~~~~~~~-----------------~~i~~~i~~~l~~~~l~~~~~~l~vl~~~~~l~~llt~L-Rd~~T~ 115 (298)
..||+||.|.....+|+ +.+...|++.-++++ +-+++++++++.|...+ .+...+
T Consensus 7 ~~A~vvitNPth~AVAL~Yd~~~~~aP~VvAKG~~~~A~~I~~~A~e~g-------VPi~e~~~LAr~L~~~~~ig~~IP 79 (97)
T 3t7y_A 7 KHASAVVSAPKDIAVAIGYMPEKYKAPWIIAMGVNLRAKRIIAEAEKYG-------VPIMRNVPLAHQLLDEGKELKFIP 79 (97)
T ss_dssp GGCSEEEEETTTEEEEEECCTTTCSSCEEEEEEEHHHHHHHHHHHHHHT-------CCEEECHHHHHHHHHHCCBTSBCC
T ss_pred CCCCEEEECCCcEEEEEEecCCCCCCCEEEEEeCcHHHHHHHHHHHHcC-------CeEEECHHHHHHHHHcCCCCCccC
Confidence 57888887655543333 455566665555444 66788888888887444 477777
Q ss_pred hhhHHHHHHHHH
Q 022342 116 KHDFVFYSDRLI 127 (298)
Q Consensus 116 ~~~Fr~~~~rl~ 127 (298)
...|.--++-|.
T Consensus 80 ~ely~aVAeiLa 91 (97)
T 3t7y_A 80 ETTYEAVGEILL 91 (97)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 766655444433
No 194
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=27.71 E-value=1.5e+02 Score=26.11 Aligned_cols=64 Identities=17% Similarity=0.302 Sum_probs=45.3
Q ss_pred CCccceEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccc-hH--HHHHHHHHHHHcCCCCccEEEEEEE
Q 022342 181 GIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLAT-GN--SANQAIQLLIEKGVPESHIIFLNLI 249 (298)
Q Consensus 181 ~a~~g~i~i~R~~~t~~~~~y~klP~~i~~~~Vil~Dp~lAT-G~--t~~~ai~~L~~~g~~~~~I~vv~~v 249 (298)
+.+.|.+.+.|=++. ..|.+++.++.|+.|+++-+.... .. .+.-.++.+++.|+ ++|.++.+.
T Consensus 21 ~~~l~~~~~~~F~dG---E~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~~~a--~~i~~v~Py 87 (284)
T 1u9y_A 21 NTKLTRVEYKRFPDN---EIYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDALRDEGV--KKITLVAPY 87 (284)
T ss_dssp TCCEECEEEEECTTC---CEEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHTTTC--CEEEEECSS
T ss_pred CCeeeeeEEEECCCC---CEEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--ceEEEEecc
Confidence 566777766653221 356778888999999999987653 12 45556788888898 789888753
No 195
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=25.02 E-value=1.5e+02 Score=21.64 Aligned_cols=45 Identities=20% Similarity=0.323 Sum_probs=33.4
Q ss_pred CCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCC
Q 022342 209 SERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPS 264 (298)
Q Consensus 209 ~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~ 264 (298)
+++.|++.. .+|.....|...|++.|. ++..+ ..|+....++...
T Consensus 54 ~~~~ivvyC---~~G~rs~~aa~~L~~~G~---~v~~l-----~GG~~~W~~~~~~ 98 (108)
T 3gk5_A 54 RDKKYAVIC---AHGNRSAAAVEFLSQLGL---NIVDV-----EGGIQSWIEEGYP 98 (108)
T ss_dssp TTSCEEEEC---SSSHHHHHHHHHHHTTTC---CEEEE-----TTHHHHHHHTTCC
T ss_pred CCCeEEEEc---CCCcHHHHHHHHHHHcCC---CEEEE-----cCcHHHHHHcCCC
Confidence 356777776 689989999999999997 33322 6788888876653
No 196
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=24.62 E-value=1.5e+02 Score=24.48 Aligned_cols=48 Identities=10% Similarity=0.172 Sum_probs=32.3
Q ss_pred cEEEEE-cCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH---HHHHHHHHhC
Q 022342 211 RHVLLL-DPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP---EGIHCVCKRF 262 (298)
Q Consensus 211 ~~Vil~-Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~---~gl~~l~~~~ 262 (298)
|.||++ |+.-.+...+..+++.+++.|+ +|.++++=... + ++.+.++-
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi---~v~~Ig~G~~~~~~~-l~~la~~~ 159 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNV---AIDIIHIGELQNESA-LQHFIDAA 159 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTE---EEEEEEESCC---CH-HHHHHHHH
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCC---EEEEEEeCCCCccHH-HHHHHHhc
Confidence 336666 5554456788999999999987 56666653322 4 88887763
No 197
>1e2k_A Thymidine kinase; transferase, antiviral drug, enzyme-prodrug gene therapy, sugar ring pucker; HET: TMC; 1.7A {Herpes simplex virus} SCOP: c.37.1.1 PDB: 1e2i_A* 1e2h_A* 1e2m_A* 1e2n_A* 1e2p_A* 1ki2_A* 1ki3_A* 1ki4_A* 1ki6_B* 1ki7_A* 1ki8_A* 3rdp_A* 2ki5_A* 1kim_A* 1qhi_A* 1p7c_A* 1vtk_A* 2vtk_A* 3vtk_A* 3f0t_A* ...
Probab=24.41 E-value=31 Score=31.64 Aligned_cols=44 Identities=9% Similarity=0.069 Sum_probs=28.3
Q ss_pred CeEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcc
Q 022342 2 NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVL 50 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~ 50 (298)
|+.+++|.|.++.+.|--.| ||+.|.+-..|++.++-.|..+..
T Consensus 156 dlt~lldl~pe~~l~RI~~R-----gr~~Eri~~~yl~rvr~~Y~~l~~ 199 (331)
T 1e2k_A 156 TNIVLGALPEDRHIDRLAKR-----QRPGERLDLAMLAAIRRVYGLLAN 199 (331)
T ss_dssp CEEEEEECCHHHHHHHHHHS-----CCTTCCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHhc-----CCCcccCCHHHHHHHHHHHHHHHH
Confidence 56777788999998884444 433222224567777777777653
No 198
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=24.13 E-value=1.7e+02 Score=25.97 Aligned_cols=66 Identities=12% Similarity=0.175 Sum_probs=36.7
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+.|||.+|+--.|.+ + ..||.+ +++-..+.+..+ ....| ....|.+|.|. +-..|.+.+.+.|...
T Consensus 217 i~IfI~pps~~~L~~-L----~~R~t~-~~i~~rl~~a~~-~e~~~----~~~fd~vivNd-~le~a~~~l~~ii~~~ 282 (295)
T 1kjw_A 217 IAIFIRPRSLENVLE-I----NKRITE-EQARKAFDRATK-LEQEF----TECFSAIVEGD-SFEEIYHKVKRVIEDL 282 (295)
T ss_dssp EEEEECCSSHHHHHH-H----CTTSCH-HHHHHHHHHHHH-HHHHH----GGGCSEEECCS-SHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHH-H----HhcCCH-HHHHHHHHHHHH-HHHhc----cccCeEEEECc-CHHHHHHHHHHHHHhc
Confidence 679999887766666 3 347754 444444443222 11222 24578888763 4445666666666543
No 199
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=24.12 E-value=2.7e+02 Score=25.57 Aligned_cols=50 Identities=22% Similarity=0.368 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHcCCCCccEEEEEEEeC------------------HHHHHHHHHhCCCcEEEEE-eecC
Q 022342 223 GNSANQAIQLLIEKGVPESHIIFLNLISA------------------PEGIHCVCKRFPSLKIVTS-EIDV 274 (298)
Q Consensus 223 G~t~~~ai~~L~~~g~~~~~I~vv~~vas------------------~~gl~~l~~~~p~v~i~~a-~id~ 274 (298)
=..+.+.++.+.+.|+ ..|.+..++-. +.+++.+.++||++-|+|- |+|+
T Consensus 68 id~l~~~~~~~~~lGi--~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~VitDvcLc~ 136 (342)
T 1h7n_A 68 VNRLKDYLKPLVAKGL--RSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCE 136 (342)
T ss_dssp HHHHHHHHHHHHHTTC--CEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTT
T ss_pred HHHHHHHHHHHHHCCC--CEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEEEeeeccc
Confidence 3578999999999999 57887777532 3678999999999888874 4444
No 200
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=24.04 E-value=41 Score=29.13 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=20.2
Q ss_pred CCeEEEEeCCchhHHHhhhhccc
Q 022342 1 MNMKIFVDTDADVRLARRIRRDT 23 (298)
Q Consensus 1 ~d~kifvd~d~d~rl~Rri~RD~ 23 (298)
.|+.||+++|.++.+.|-..|.+
T Consensus 111 ~d~VI~Ldvp~e~l~~Rl~~R~~ 133 (230)
T 3gmt_A 111 IDYVLEIDVPFSEIIERMSGRRT 133 (230)
T ss_dssp CSEEEEECCCHHHHHHHHHTEEE
T ss_pred ccEEEEEeCCHHHHHHHHHcCCc
Confidence 47899999999999999888864
No 201
>3bzs_A ESCU; auto cleavage protein, intein, T3SS, TTSS, asparagine cycliz membrane, membrane protein, protein transport; 1.48A {Escherichia coli} PDB: 3bzr_A 3bzp_A 3bzt_A 3c03_A
Probab=23.89 E-value=75 Score=25.43 Aligned_cols=67 Identities=16% Similarity=0.126 Sum_probs=42.9
Q ss_pred ccceEEecCCCCCchhH-----------------HHHHHHHhhhccccccccCCCceeeccchHHHHHHh-HhhhcCCCC
Q 022342 54 KYADVIIPRGGDNHVAI-----------------DLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMH-TLIRDRGIS 115 (298)
Q Consensus 54 ~~ADiii~~~~~~~~~~-----------------~~i~~~i~~~l~~~~l~~~~~~l~vl~~~~~l~~ll-t~LRd~~T~ 115 (298)
..||+||.|.....+|+ +.+...|++.-.+++ |-+++++++++.|. +.=.+...+
T Consensus 46 ~~A~vvi~NPth~AVAL~Yd~~~~~AP~VvAKG~g~~A~~I~e~A~e~g-------VPi~e~~~LAr~Ly~~~~ig~~IP 118 (137)
T 3bzs_A 46 KKSTVIVKDPTHIAICLYYKLGETPLPLVIETGKDAKALQIIKLAELYD-------IPVIEDIPLARSLYKNIHKGQYIT 118 (137)
T ss_dssp HHCSEEEEETTTEEEEEECCTTTCSSCEEEEEEETHHHHHHHHHHHHHT-------CCEEECHHHHHHHHHHSCTTCBCC
T ss_pred CCCCEEEECCCcEEEEEEeCCCCCCCCEEEEEeCCHHHHHHHHHHHHcC-------CCEEeCHHHHHHHHHhCCCCCccC
Confidence 67888888876654443 345555555544444 77888888888887 444477777
Q ss_pred hhhHHHHHHHHH
Q 022342 116 KHDFVFYSDRLI 127 (298)
Q Consensus 116 ~~~Fr~~~~rl~ 127 (298)
...|+.-+.-|.
T Consensus 119 ~ely~aVAeiLa 130 (137)
T 3bzs_A 119 EDFFEPVAQLIR 130 (137)
T ss_dssp GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 776666444443
No 202
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=23.46 E-value=75 Score=25.62 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=43.9
Q ss_pred ccceEEecCCCCCchhH-----------------HHHHHHHhhhccccccccCCCceeeccchHHHHHHh-HhhhcCCCC
Q 022342 54 KYADVIIPRGGDNHVAI-----------------DLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMH-TLIRDRGIS 115 (298)
Q Consensus 54 ~~ADiii~~~~~~~~~~-----------------~~i~~~i~~~l~~~~l~~~~~~l~vl~~~~~l~~ll-t~LRd~~T~ 115 (298)
..||+||.|.....+|+ +.+...|.+.-.+++ |-+++++++++.|. +.=.+...+
T Consensus 45 ~~A~vvi~NPth~AVAL~Yd~~~~~AP~VvAKG~g~~A~~I~e~A~e~g-------VPi~e~~~LAr~Ly~~~~ig~~IP 117 (144)
T 2jlj_A 45 KRSSVVVAAATHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEG-------VPILQRIPLARALYWDALVDHYIP 117 (144)
T ss_dssp HTCSEEEEETTTEEEEEECCTTTCSSCEEEEEEETHHHHHHHHHHHHHT-------CCEEECHHHHHHHHHHCCTTSBCC
T ss_pred CCCCEEEECCCcEEEEEEeCCCCCCCCEEEEEeCCHHHHHHHHHHHHcC-------CCEEeCHHHHHHHHHhCCCCCccC
Confidence 67999998876655443 344555555544444 77888888888887 444477777
Q ss_pred hhhHHHHHHHHHH
Q 022342 116 KHDFVFYSDRLIR 128 (298)
Q Consensus 116 ~~~Fr~~~~rl~~ 128 (298)
...|+.-+.-|.+
T Consensus 118 ~ely~aVAeiLa~ 130 (144)
T 2jlj_A 118 AEQIEATAEVLRW 130 (144)
T ss_dssp GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777665544443
No 203
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=23.41 E-value=1.1e+02 Score=23.73 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=32.3
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHh
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKR 261 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~ 261 (298)
++.|++++ .+|.....|...|++.|. +++.+ -..|+..+.++
T Consensus 56 ~~~ivvyC---~~g~rs~~aa~~L~~~G~--~~v~~-----l~GG~~~W~~~ 97 (141)
T 3ilm_A 56 SRDIYVYG---AGDEQTSQAVNLLRSAGF--EHVSE-----LKGGLAAWKAI 97 (141)
T ss_dssp TSEEEEEC---SSHHHHHHHHHHHHHTTC--CSEEE-----CTTHHHHHHHT
T ss_pred CCeEEEEE---CCChHHHHHHHHHHHcCC--CCEEE-----ecCHHHHHHHC
Confidence 56777775 489999999999999999 46543 35788888775
No 204
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=23.02 E-value=1.1e+02 Score=27.56 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=28.5
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN 247 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~ 247 (298)
++++++++|+= +||...+++..|.+.|+ ++|.+++
T Consensus 151 ~l~gk~~lVlG----aGG~g~aia~~L~~~Ga--~~V~i~n 185 (315)
T 3tnl_A 151 DIIGKKMTICG----AGGAATAICIQAALDGV--KEISIFN 185 (315)
T ss_dssp CCTTSEEEEEC----CSHHHHHHHHHHHHTTC--SEEEEEE
T ss_pred CccCCEEEEEC----CChHHHHHHHHHHHCCC--CEEEEEE
Confidence 57899998763 58888999999999999 5777665
No 205
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=22.96 E-value=85 Score=27.17 Aligned_cols=22 Identities=18% Similarity=0.143 Sum_probs=19.2
Q ss_pred CeEEEEeCCchhHHHhhhhccc
Q 022342 2 NMKIFVDTDADVRLARRIRRDT 23 (298)
Q Consensus 2 d~kifvd~d~d~rl~Rri~RD~ 23 (298)
|..|.+|++.+.++.|=..|+.
T Consensus 169 d~VvVvdv~~~~qieRl~~rg~ 190 (241)
T 1dek_A 169 DYYIVPDTRQDHEMDAARAMGA 190 (241)
T ss_dssp SEEEECCCCSHHHHHHHHHTTC
T ss_pred CEEEEEcCCcHHHHHHHHHCCC
Confidence 6678999999999999888874
No 206
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=22.25 E-value=1.8e+02 Score=19.84 Aligned_cols=14 Identities=29% Similarity=0.430 Sum_probs=7.3
Q ss_pred cEEEEEcCcccchH
Q 022342 211 RHVLLLDPVLATGN 224 (298)
Q Consensus 211 ~~Vil~Dp~lATG~ 224 (298)
++|+++|+--....
T Consensus 2 ~~iliv~~~~~~~~ 15 (119)
T 2j48_A 2 GHILLLEEEDEAAT 15 (119)
T ss_dssp CEEEEECCCHHHHH
T ss_pred CEEEEEeCCHHHHH
Confidence 45666666544333
No 207
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=22.16 E-value=42 Score=33.28 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=22.7
Q ss_pred cCcccchHHHHHHHHHHHHcCCCCcc
Q 022342 217 DPVLATGNSANQAIQLLIEKGVPESH 242 (298)
Q Consensus 217 Dp~lATG~t~~~ai~~L~~~g~~~~~ 242 (298)
-||+-||+++.++|+.|++.|.-++.
T Consensus 461 ap~~vtg~~~~~~i~~l~~~~~l~~~ 486 (611)
T 4a57_A 461 APMIVTGGGMLAAINTLKDHRLLRSD 486 (611)
T ss_dssp SCEEEECHHHHHHHHHHHHTTSSCTT
T ss_pred CCeEEechhHhhHHHHHHHcCCCccc
Confidence 68999999999999999999985443
No 208
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=21.86 E-value=2.1e+02 Score=24.41 Aligned_cols=53 Identities=13% Similarity=0.259 Sum_probs=35.8
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH------HHHHHHHHhCCCcEEEEEee
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP------EGIHCVCKRFPSLKIVTSEI 272 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~------~gl~~l~~~~p~v~i~~a~i 272 (298)
++.++|+||.- +. ..++.|++.|. +| -.++.+- .|+..+.+.+|+++||+..-
T Consensus 28 ~~~~vlID~G~--~~---~i~~~l~~~g~---~i--~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~ 86 (258)
T 2qed_A 28 EGRCVIVDPGE--AA---PVLKAIAEHKW---MP--EAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAE 86 (258)
T ss_dssp TSEEEEECCSC--HH---HHHHHHHHHTC---EE--EEEECCSCCHHHHTTHHHHHHHCTTCEEEECGG
T ss_pred CCcEEEEeCCC--cH---HHHHHHHHcCC---CC--CEEEeCCCCccccCCHHHHHHHCCCCEEEeccc
Confidence 46789999973 33 34556666675 23 3344432 47888999999899998753
No 209
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=21.58 E-value=34 Score=30.24 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEE
Q 022342 224 NSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVT 269 (298)
Q Consensus 224 ~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~ 269 (298)
.-+..+++.|.++|+ +-|+++|=-++.-+++.+++.+|++.|+-
T Consensus 56 ~~~~~~~~~L~~~g~--~~iVIACNTa~~~al~~lr~~~~~iPvig 99 (268)
T 3out_A 56 KFAAQTAKFLIDQEV--KAIIIACNTISAIAKDIVQEIAKAIPVID 99 (268)
T ss_dssp HHHHHHHHHHHHTTC--SEEEECCHHHHHHHHHHHHHHHTTSCEEE
T ss_pred HHHHHHHHHHHHCCC--CEEEEeCCChHHHHHHHHHHhcCCCCEEe
Confidence 344667889999999 45666665556668899999986666654
No 210
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=21.53 E-value=90 Score=27.73 Aligned_cols=62 Identities=16% Similarity=0.282 Sum_probs=40.1
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCC----------CcEEEEEeecCCC
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFP----------SLKIVTSEIDVAL 276 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p----------~v~i~~a~id~~l 276 (298)
++++++|+|+ .+|++..+++..|.+.|+ ++|.+++ =+++-.+.+.+.+. +..|+..+..-++
T Consensus 119 ~~~~k~vlvl----GaGGaaraia~~L~~~G~--~~v~v~n--Rt~~ka~~La~~~~~~~~~~l~~l~~DivInaTp~Gm 190 (282)
T 3fbt_A 119 EIKNNICVVL----GSGGAARAVLQYLKDNFA--KDIYVVT--RNPEKTSEIYGEFKVISYDELSNLKGDVIINCTPKGM 190 (282)
T ss_dssp CCTTSEEEEE----CSSTTHHHHHHHHHHTTC--SEEEEEE--SCHHHHHHHCTTSEEEEHHHHTTCCCSEEEECSSTTS
T ss_pred CccCCEEEEE----CCcHHHHHHHHHHHHcCC--CEEEEEe--CCHHHHHHHHHhcCcccHHHHHhccCCEEEECCccCc
Confidence 4678898876 468888889999999998 5787765 33444444433221 3456666655443
No 211
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=21.36 E-value=44 Score=30.21 Aligned_cols=67 Identities=25% Similarity=0.268 Sum_probs=37.2
Q ss_pred EEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCH---HHHHHHHHhCCCcEEEEEeecCCCCCCCceeCCCCch
Q 022342 213 VLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAP---EGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEF 289 (298)
Q Consensus 213 Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~---~gl~~l~~~~p~v~i~~a~id~~l~~~~~ivPGlGD~ 289 (298)
=+|+||...+|.|+.+|.+. | -.++++=..+ +-++-..+..-+ ++.+|.. .+-.++...-++
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~----~-----r~~ig~e~~~~~~~~~~~~~~Rl~~----~~~~~~~--~~~~~~~~~~~~ 308 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQE----G-----RNSICTDAAPVFKEYYQKQLTFLQD----DGLIDKA--RSYEIVEGAANF 308 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHH----T-----CEEEEEESSTHHHHHHHHHHHHC---------------CCEEEEECGGGT
T ss_pred CEEEecCCCCCHHHHHHHHc----C-----CcEEEEECCccHHHHHHHHHHHHHH----ccCCccc--ceeeecchHHHH
Confidence 36899999999999999876 3 2344554455 444433333332 1233321 123466666777
Q ss_pred hhhcc
Q 022342 290 GDRYF 294 (298)
Q Consensus 290 GdR~f 294 (298)
.|+++
T Consensus 309 ~~~~~ 313 (319)
T 1eg2_A 309 GAALQ 313 (319)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 77766
No 212
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=21.17 E-value=2e+02 Score=21.03 Aligned_cols=49 Identities=12% Similarity=0.066 Sum_probs=22.0
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCC
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPS 264 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~ 264 (298)
..+|+|+|+--.....+. +.|.+.|. ...+.+.-...++++.+.+..|+
T Consensus 5 ~~~ILivdd~~~~~~~l~---~~L~~~~~---~~~v~~~~~~~~a~~~l~~~~~d 53 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIR---RVLDRKDI---HCQLEFVDNGAKALYQVQQAKYD 53 (144)
T ss_dssp CEEEEEECCCHHHHHHHH---HHHHHTTC---CEEEEEESSHHHHHHHHTTCCCS
T ss_pred CCEEEEEeCCHHHHHHHH---HHHHhcCC---CeeEEEECCHHHHHHHhhcCCCC
Confidence 456777777544333222 23344454 22233333344455555444443
No 213
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=21.13 E-value=2.7e+02 Score=25.66 Aligned_cols=64 Identities=11% Similarity=0.169 Sum_probs=45.4
Q ss_pred CCccceEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccc--hH--HHHHHHHHHHHcCCCCccEEEEEEE
Q 022342 181 GIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLAT--GN--SANQAIQLLIEKGVPESHIIFLNLI 249 (298)
Q Consensus 181 ~a~~g~i~i~R~~~t~~~~~y~klP~~i~~~~Vil~Dp~lAT--G~--t~~~ai~~L~~~g~~~~~I~vv~~v 249 (298)
+++.|.+.+.|=.+ | ..|.+++.++.|+.|+|+-+.... .. .+.-.++.|++.++ ++|.++.+.
T Consensus 53 g~~l~~~~~~~F~d-G--E~~v~i~esvrg~dV~iiqs~~~~~nd~lmeLl~~idA~k~asA--~rit~ViPY 120 (379)
T 2ji4_A 53 GVEMGKVQVYQEPN-R--ETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCA--KSIIGVIPY 120 (379)
T ss_dssp TCCCCCEEEEECTT-S--CEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHTTC--SEEEEECSS
T ss_pred CCceEeeEEEECCC-C--CEEEEeCCCcCCCEEEEEeCCCCCccHHHHHHHHHHHHHHhcCC--ceEEEEEec
Confidence 56677777665322 1 236777888999999999998652 22 45566778899998 789988753
No 214
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=21.04 E-value=1.6e+02 Score=26.85 Aligned_cols=44 Identities=23% Similarity=0.377 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCCCcEEEEE
Q 022342 224 NSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTS 270 (298)
Q Consensus 224 ~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p~v~i~~a 270 (298)
.....+++.|.+.|+ ++++.+-..-.+.+.++.+.||++.++..
T Consensus 73 ~d~~~~l~~l~~~g~---d~Ii~~g~~~~~~~~~vA~~~Pdv~fv~i 116 (356)
T 3s99_A 73 ADAERSIKRIARAGN---KLIFTTSFGYMDPTVKVAKKFPDVKFEHA 116 (356)
T ss_dssp HHHHHHHHHHHHTTC---SEEEECSGGGHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHHHHHHHCCC---CEEEECCHHHHHHHHHHHHHCCCCEEEEE
Confidence 445778999999998 46666655566788999999999887654
No 215
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=20.99 E-value=61 Score=28.04 Aligned_cols=27 Identities=11% Similarity=0.192 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHcCCCCccEEEEEEEeCH
Q 022342 224 NSANQAIQLLIEKGVPESHIIFLNLISAP 252 (298)
Q Consensus 224 ~t~~~ai~~L~~~g~~~~~I~vv~~vas~ 252 (298)
=++..+++.|.+.|+ ++|.++.++..+
T Consensus 187 P~~~~~l~~l~~~G~--~~v~v~P~~l~~ 213 (269)
T 2xvy_A 187 PSFDNVMAELDVRKA--KRVWLMPLMAVA 213 (269)
T ss_dssp SCHHHHHHHHHHHTC--SEEEEEEESSSC
T ss_pred CCHHHHHHHHHHCCC--CEEEEECCcccc
Confidence 357778899988898 688888775443
No 216
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=20.84 E-value=3.2e+02 Score=25.19 Aligned_cols=70 Identities=10% Similarity=0.032 Sum_probs=39.3
Q ss_pred eEEEEeCCchhHHHhhhhcccccCCCCHHHHHHHHHhhhhhHHHhhcccccccceEEecCCCCCchhHHHHHHHHhhh
Q 022342 3 MKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTK 80 (298)
Q Consensus 3 ~kifvd~d~d~rl~Rri~RD~~ergr~~~~v~~~~~~~~~p~~~~~i~P~~~~ADiii~~~~~~~~~~~~i~~~i~~~ 80 (298)
+.|||.+|+-..|.+|..|-..+ +.+ .++...+.+.-....| ..+.|.||-|..-+..|.+.+.+.|...
T Consensus 312 ~~IFI~PPS~~~L~~~~~r~~~~---s~e-~~~~~~~~a~~~e~~~----~~~fd~vivNd~l~~~a~~~l~~ii~~~ 381 (391)
T 3tsz_A 312 IVVFLNPDSKQGVKTMRMRLCPE---SRK-SARKLYERSHKLRKNN----HHLFTTTINLNSMNDGWYGALKEAIQQQ 381 (391)
T ss_dssp EEEEEECCCHHHHHHHHHHHCSS---CCC-CHHHHHHHHHHHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEeCcCHHHHHHHHhcCCCC---CHH-HHHHHHHHHHHHHHhc----cccCcEEEECCCcHHHHHHHHHHHHHHh
Confidence 57999999999988764442222 222 2333222232222233 2467888876433335777776666554
No 217
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=20.79 E-value=43 Score=30.11 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=26.1
Q ss_pred EEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHH
Q 022342 213 VLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCK 260 (298)
Q Consensus 213 Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~ 260 (298)
=+|+||...+|.|+.+|.+. |. .++++=..+...+-..+
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~----gr-----~~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERE----SR-----KWISFEMKPEYVAASAF 292 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHT----TC-----EEEEEESCHHHHHHHHG
T ss_pred CEEEECCCCCCHHHHHHHHc----CC-----CEEEEeCCHHHHHHHHH
Confidence 36899999999999998765 32 34555455554444333
No 218
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=20.59 E-value=2.7e+02 Score=24.94 Aligned_cols=83 Identities=14% Similarity=0.189 Sum_probs=54.9
Q ss_pred CcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeC---------------HHHHHHHHHhCCCcEEEEEeecC
Q 022342 210 ERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISA---------------PEGIHCVCKRFPSLKIVTSEIDV 274 (298)
Q Consensus 210 ~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas---------------~~gl~~l~~~~p~v~i~~a~id~ 274 (298)
...+++.-|.-.+=..+..+++.|++.|++. .=++++-+.. .++++++.+.|+...+...-+++
T Consensus 238 ~~~vlV~~p~~~~~~e~~r~~~~l~~~~i~v-~gvV~N~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~l~~iPl~~ 316 (349)
T 3ug7_A 238 TAFRLVVIPEEMSILESERAMKALQKYGIPI-DAVIVNQLIPEDVQCDFCRARRELQLKRLEMIKEKFGDKVIAYVPLLR 316 (349)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHTTCCE-EEEEEEEECCSCCCSHHHHHHHHHHHHHHHHHHHHSTTSEEEEEECCS
T ss_pred ceEEEEECCCccHHHHHHHHHHHHHHCCCCe-eEEEEcCCccccCCCchHHHHHHHHHHHHHHHHHHcCCCcEEEecCCC
Confidence 3468889999999999999999999999852 2234443322 36889999999877766655544
Q ss_pred CCCCCCceeCCCCchhhhccCC
Q 022342 275 ALNEEFRVIPGLGEFGDRYFGT 296 (298)
Q Consensus 275 ~l~~~~~ivPGlGD~GdR~fgt 296 (298)
.-- .| +..|..+++.+|+.
T Consensus 317 ~e~-~g--~~~L~~~~~~l~~~ 335 (349)
T 3ug7_A 317 TEA-KG--IETLKQIAKILYGE 335 (349)
T ss_dssp SCS-CS--HHHHHHHHHHHC--
T ss_pred CCC-CC--HHHHHHHHHHHcCC
Confidence 310 01 12356667777764
No 219
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=20.12 E-value=1.2e+02 Score=26.64 Aligned_cols=49 Identities=20% Similarity=0.357 Sum_probs=35.0
Q ss_pred CCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEEEEeCHHHHHHHHHhCC
Q 022342 207 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFP 263 (298)
Q Consensus 207 ~i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~~vas~~gl~~l~~~~p 263 (298)
++++++++|+ .+|+...+++..|.+.|+ ++|.+++ -+++-.+.+.+.+.
T Consensus 117 ~l~~k~~lvl----GaGg~~~aia~~L~~~G~--~~v~i~~--R~~~~a~~la~~~~ 165 (272)
T 3pwz_A 117 PLRNRRVLLL----GAGGAVRGALLPFLQAGP--SELVIAN--RDMAKALALRNELD 165 (272)
T ss_dssp CCTTSEEEEE----CCSHHHHHHHHHHHHTCC--SEEEEEC--SCHHHHHHHHHHHC
T ss_pred CccCCEEEEE----CccHHHHHHHHHHHHcCC--CEEEEEe--CCHHHHHHHHHHhc
Confidence 5678998876 468888999999999998 5666554 24555666665543
No 220
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=20.04 E-value=86 Score=27.63 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=46.4
Q ss_pred CCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEEEE-EEeCHHHHHHHHHhCCCcE
Q 022342 208 ISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLN-LISAPEGIHCVCKRFPSLK 266 (298)
Q Consensus 208 i~~~~Vil~Dp~lATG~t~~~ai~~L~~~g~~~~~I~vv~-~vas~~gl~~l~~~~p~v~ 266 (298)
+....+++=+--..|+..+..+.+.|+++|.+.+++++|+ ..-.+-++.-+.+.+|++.
T Consensus 112 Vp~~~IllE~~S~nT~ENa~~s~~ll~~~g~~~~~iiLVTs~~Hm~RA~~~f~~~~~~~~ 171 (266)
T 3ca8_A 112 IPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNP 171 (266)
T ss_dssp CCGGGEEEECCCCSHHHHHHHHHHHHHTCSSCCSCEEEECCTTTHHHHHHHHHHHHCCCT
T ss_pred CCHHHEEeCCCCccHHHHHHHHHHHHHhcCCCCCeEEEECChhHHHHHHHHHHHhCCCCC
Confidence 4455778888889999999999999999987556787777 4555677777888888765
Done!