Query 022346
Match_columns 298
No_of_seqs 357 out of 1777
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:00:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fsp_A A/G-specific adenine gl 99.9 4.9E-23 1.7E-27 193.5 0.4 207 17-269 124-345 (369)
2 3grn_A MUTT related protein; s 99.8 3.6E-19 1.2E-23 146.0 14.3 112 126-269 8-119 (153)
3 2yvp_A NDX2, MUTT/nudix family 99.8 2.7E-19 9.2E-24 151.1 9.1 134 126-292 41-177 (182)
4 2w4e_A MUTT/nudix family prote 99.8 6.3E-19 2.2E-23 143.7 9.7 128 125-284 4-133 (145)
5 3r03_A Nudix hydrolase; struct 99.8 1.3E-18 4.6E-23 140.6 11.3 133 128-297 10-142 (144)
6 3i7u_A AP4A hydrolase; nudix p 99.8 3.3E-19 1.1E-23 143.9 7.4 106 126-270 4-113 (134)
7 2fkb_A Putative nudix hydrolas 99.8 2.4E-18 8.2E-23 144.8 12.1 117 126-274 37-154 (180)
8 3gwy_A Putative CTP pyrophosph 99.8 1.4E-18 4.8E-23 140.3 10.2 106 129-269 9-116 (140)
9 1sjy_A MUTT/nudix family prote 99.8 4.2E-18 1.4E-22 139.9 11.5 116 126-272 13-133 (159)
10 2rrk_A ORF135, CTP pyrophospho 99.8 4E-18 1.4E-22 137.0 10.5 123 128-286 10-132 (140)
11 3ees_A Probable pyrophosphohyd 99.8 2.1E-18 7.1E-23 140.6 8.9 110 126-269 21-130 (153)
12 1rya_A GDP-mannose mannosyl hy 99.7 7.8E-18 2.7E-22 138.5 12.1 111 126-269 18-138 (160)
13 1vcd_A NDX1; nudix protein, di 99.7 2.7E-18 9.2E-23 135.7 8.5 106 126-269 2-107 (126)
14 1vhz_A ADP compounds hydrolase 99.7 4.6E-18 1.6E-22 146.1 9.8 128 126-286 49-178 (198)
15 1q27_A Putative nudix hydrolas 99.7 6.1E-18 2.1E-22 141.1 10.1 121 126-277 34-156 (171)
16 3hhj_A Mutator MUTT protein; n 99.7 1.2E-17 4.1E-22 137.5 11.3 118 127-278 30-147 (158)
17 2pbt_A AP4A hydrolase; nudix p 99.7 5E-18 1.7E-22 135.4 8.1 105 126-269 4-112 (134)
18 1mk1_A ADPR pyrophosphatase; n 99.7 5.2E-18 1.8E-22 146.7 8.5 163 57-286 11-176 (207)
19 3shd_A Phosphatase NUDJ; nudix 99.7 2.4E-17 8.3E-22 134.8 12.0 108 126-268 5-114 (153)
20 1mut_A MUTT, nucleoside tripho 99.7 3.6E-18 1.2E-22 135.2 6.6 112 131-278 9-120 (129)
21 3exq_A Nudix family hydrolase; 99.7 1E-17 3.4E-22 138.9 8.9 116 126-278 10-128 (161)
22 1v8y_A ADP-ribose pyrophosphat 99.7 1.2E-17 4.1E-22 139.5 9.4 125 126-284 34-161 (170)
23 3i9x_A MUTT/nudix family prote 99.7 4.9E-17 1.7E-21 138.0 12.6 135 127-293 28-178 (187)
24 3eds_A MUTT/nudix family prote 99.7 2.4E-18 8.3E-23 141.3 4.1 112 126-274 21-140 (153)
25 3oga_A Nucleoside triphosphata 99.7 1.8E-17 6.3E-22 137.4 9.2 112 126-269 27-149 (165)
26 4dyw_A MUTT/nudix family prote 99.7 8.7E-18 3E-22 138.7 7.2 111 125-268 28-140 (157)
27 3id9_A MUTT/nudix family prote 99.7 2.7E-17 9.2E-22 137.2 10.2 114 126-270 23-136 (171)
28 3son_A Hypothetical nudix hydr 99.7 1.4E-16 4.9E-21 129.7 14.2 130 125-294 4-144 (149)
29 1ktg_A Diadenosine tetraphosph 99.7 3E-17 1E-21 131.6 9.9 113 126-270 3-119 (138)
30 3f6a_A Hydrolase, nudix family 99.7 1.2E-17 4E-22 137.9 6.2 107 126-269 6-133 (159)
31 3q93_A 7,8-dihydro-8-oxoguanin 99.7 3.7E-17 1.3E-21 137.7 9.0 109 126-269 24-134 (176)
32 1hzt_A Isopentenyl diphosphate 99.7 4.3E-17 1.5E-21 138.7 9.0 113 127-271 33-152 (190)
33 1nqz_A COA pyrophosphatase (MU 99.7 6E-17 2E-21 138.1 9.1 114 126-270 34-152 (194)
34 1g0s_A Hypothetical 23.7 kDa p 99.7 3.2E-16 1.1E-20 135.7 13.2 136 125-286 56-197 (209)
35 2o1c_A DATP pyrophosphohydrola 99.7 1.4E-16 4.7E-21 129.1 9.5 111 125-269 8-132 (150)
36 3fcm_A Hydrolase, nudix family 99.7 1.9E-16 6.6E-21 135.5 10.8 134 126-297 45-190 (197)
37 3gg6_A Nudix motif 18, nucleos 99.7 3E-17 1E-21 134.7 5.4 110 127-269 21-130 (156)
38 2b0v_A Nudix hydrolase; struct 99.7 1E-16 3.4E-21 130.8 8.3 111 126-269 8-120 (153)
39 1f3y_A Diadenosine 5',5'''-P1, 99.7 2.6E-16 9E-21 129.6 10.9 131 126-292 14-162 (165)
40 3u53_A BIS(5'-nucleosyl)-tetra 99.7 2E-16 6.7E-21 130.1 10.1 100 135-270 21-126 (155)
41 1x51_A A/G-specific adenine DN 99.7 3.1E-16 1.1E-20 128.8 10.1 107 129-269 22-133 (155)
42 2jvb_A Protein PSU1, mRNA-deca 99.7 4.1E-16 1.4E-20 126.4 10.5 109 129-272 7-117 (146)
43 2yyh_A MUTT domain, 8-OXO-DGTP 99.7 1.6E-16 5.5E-21 127.8 7.9 106 125-267 8-119 (139)
44 2b06_A MUTT/nudix family prote 99.6 2.2E-16 7.6E-21 129.2 8.2 114 126-278 8-126 (155)
45 3h95_A Nucleoside diphosphate- 99.6 2.3E-16 7.9E-21 135.3 8.6 118 122-271 22-142 (199)
46 3o6z_A GDP-mannose pyrophospha 99.6 5.4E-16 1.9E-20 132.3 10.7 134 125-287 44-185 (191)
47 3gz5_A MUTT/nudix family prote 99.6 6.9E-16 2.4E-20 136.5 11.7 122 125-281 21-149 (240)
48 3q1p_A Phosphohydrolase (MUTT/ 99.6 2E-16 6.9E-21 136.5 7.8 110 122-269 64-178 (205)
49 2dsc_A ADP-sugar pyrophosphata 99.6 3E-16 1E-20 136.0 7.3 107 138-271 77-185 (212)
50 3o8s_A Nudix hydrolase, ADP-ri 99.6 2.7E-16 9.4E-21 135.7 6.6 109 122-269 66-179 (206)
51 2fb1_A Conserved hypothetical 99.6 1.6E-16 5.5E-21 139.3 5.0 112 125-269 12-128 (226)
52 2azw_A MUTT/nudix family prote 99.6 3.1E-16 1.1E-20 127.0 5.9 106 126-269 18-130 (148)
53 3cng_A Nudix hydrolase; struct 99.6 4.8E-16 1.6E-20 132.3 7.4 106 125-267 39-144 (189)
54 3q91_A Uridine diphosphate glu 99.6 1.1E-15 3.6E-20 133.4 9.0 126 125-275 35-194 (218)
55 3e57_A Uncharacterized protein 99.6 1.8E-16 6.1E-21 137.3 3.5 117 132-275 73-194 (211)
56 1vk6_A NADH pyrophosphatase; 1 99.6 1.2E-15 4E-20 137.2 8.0 103 131-269 144-246 (269)
57 1k2e_A Nudix homolog; nudix/MU 99.6 1.5E-15 5.3E-20 124.9 7.8 57 127-211 2-58 (156)
58 3fk9_A Mutator MUTT protein; s 99.6 1.7E-15 5.8E-20 128.9 8.2 103 129-269 7-114 (188)
59 2fvv_A Diphosphoinositol polyp 99.6 6E-16 2.1E-20 132.5 5.3 109 127-270 41-151 (194)
60 2kdv_A RNA pyrophosphohydrolas 99.6 3.7E-15 1.3E-19 124.0 9.6 112 126-268 8-134 (164)
61 2pqv_A MUTT/nudix family prote 99.6 6.8E-16 2.3E-20 126.3 4.5 107 126-269 19-129 (154)
62 3f13_A Putative nudix hydrolas 99.6 3.4E-15 1.2E-19 124.3 7.6 95 126-263 15-109 (163)
63 2qjo_A Bifunctional NMN adenyl 99.6 4.2E-15 1.4E-19 137.1 8.7 124 127-282 204-335 (341)
64 2a6t_A SPAC19A8.12; alpha/beta 99.6 5E-15 1.7E-19 133.3 8.1 113 125-270 100-213 (271)
65 2dho_A Isopentenyl-diphosphate 99.5 1.2E-14 3.9E-19 128.2 9.1 119 127-271 60-192 (235)
66 2pny_A Isopentenyl-diphosphate 99.5 1.5E-14 5.2E-19 128.3 8.9 119 127-271 71-203 (246)
67 2fml_A MUTT/nudix family prote 99.5 4.2E-14 1.4E-18 127.3 11.2 115 122-269 35-157 (273)
68 2qjt_B Nicotinamide-nucleotide 99.5 4.3E-14 1.5E-18 131.0 11.0 122 127-278 209-338 (352)
69 1u20_A U8 snoRNA-binding prote 99.5 1.2E-14 3.9E-19 126.2 4.6 112 129-269 47-165 (212)
70 3fjy_A Probable MUTT1 protein; 99.4 5.4E-13 1.8E-17 124.7 12.3 105 135-269 35-158 (364)
71 3dup_A MUTT/nudix family prote 99.4 4.4E-13 1.5E-17 121.8 10.9 120 126-272 118-245 (300)
72 3qsj_A Nudix hydrolase; struct 99.4 1.7E-12 5.8E-17 114.0 10.8 68 139-208 25-92 (232)
73 2xsq_A U8 snoRNA-decapping enz 99.2 6E-12 2.1E-16 109.5 6.4 99 139-267 66-171 (217)
74 3kvh_A Protein syndesmos; NUDT 99.1 1.8E-10 6.2E-15 96.9 7.9 97 139-267 45-147 (214)
75 1q33_A Pyrophosphatase, ADP-ri 99.1 1.7E-10 5.9E-15 104.6 8.4 42 139-207 140-181 (292)
76 3rh7_A Hypothetical oxidoreduc 98.9 1.3E-09 4.5E-14 100.0 6.1 94 125-269 182-276 (321)
77 3bho_A Cleavage and polyadenyl 98.5 8.4E-08 2.9E-12 81.5 3.9 53 125-205 57-112 (208)
78 3n5n_X A/G-specific adenine DN 95.3 0.00012 4.2E-09 65.7 -9.1 85 17-109 135-222 (287)
79 1kea_A Possible G-T mismatches 94.9 0.0003 1E-08 60.8 -7.4 86 17-110 121-208 (221)
80 1kg2_A A/G-specific adenine gl 92.9 0.00042 1.5E-08 60.0 -10.5 86 17-110 115-203 (225)
81 2abk_A Endonuclease III; DNA-r 92.7 0.00078 2.7E-08 57.7 -9.0 83 17-109 115-197 (211)
82 1orn_A Endonuclease III; DNA r 89.1 0.0019 6.6E-08 55.9 -10.1 83 17-109 119-202 (226)
83 4e9f_A Methyl-CPG-binding doma 78.0 0.31 1.1E-05 39.6 -0.9 38 17-56 110-148 (161)
84 1pu6_A 3-methyladenine DNA gly 40.3 3.6 0.00012 34.8 -1.4 34 17-53 127-160 (218)
85 4b21_A Probable DNA-3-methylad 27.7 9.5 0.00032 32.6 -0.8 37 17-54 156-192 (232)
86 3fhg_A Mjogg, N-glycosylase/DN 20.4 12 0.00041 31.2 -1.6 33 17-53 123-156 (207)
No 1
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.85 E-value=4.9e-23 Score=193.46 Aligned_cols=207 Identities=15% Similarity=0.166 Sum_probs=144.2
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHHHhhCcCC-c--CCcceeeeceEeecCCCCCCcceEEEEecCcc
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSL-F--NGQKFRYGGHIMRGEGGSSVESHVCLHLGLTD 93 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~~~~~p~l-f--ng~~f~~~~~~~~~~~~~~~~~~~~l~lg~T~ 93 (298)
||||+.|++++++-+|++ |.+. +|.+|.|+..++..-.... + +-..++.....+.+.+...+++++.|++|.+
T Consensus 124 ~GIG~~tA~~il~~~~~~-~~~~--vD~~v~Rv~~rl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~G~~- 199 (369)
T 3fsp_A 124 KGVGPYTVGAVLSLAYGV-PEPA--VDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGAL- 199 (369)
T ss_dssp TTCCHHHHHHHHHHHHCC-CCCC--CCHHHHHHHHHHTTCCSCTTSHHHHHHHHHHHHHHCCSSSHHHHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHCCC-Cccc--ccHHHHHHHHHHcCcccCccccchHHHHHHHHHHhCChhhHHHHHHHHHHHHHH-
Confidence 899999999999999999 7654 8999999998875421111 1 1112322222333344566789999999999
Q ss_pred cccccccCCCcchhhcc----CCCCchh------hhhccc--cCCcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCc
Q 022346 94 YRTFVGTNLNPLWEKFL----VPSEDDV------IQCQHT--ASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGG 161 (298)
Q Consensus 94 yr~~v~T~~~p~~~~~~----~~~~~~~------~~~~~~--~~~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG 161 (298)
+||+.+|.|..|. |...... .+.... .....++++|.+.+|+|||+||... +.++|+|+||||
T Consensus 200 ----~C~~~~P~C~~Cpl~~~C~~~~~~~~~~~PvK~~kk~~~~~~~~~~vi~~~~g~vLL~rR~~~-g~~~GlWefPGG 274 (369)
T 3fsp_A 200 ----VCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEGRVLIRKRDST-GLLANLWEFPSC 274 (369)
T ss_dssp ----TSCSSSCCTTTCTTGGGCHHHHHTCGGGCSCCCCCCCCEEEEEEEEEEECSSSEEEEEECCSS-STTTTCEECCEE
T ss_pred ----hcCCCCCCCCCCCChhhhHHHhcCCcccCCccccccCcceEEEEEEEEEeCCCEEEEEECCCC-CCcCCcccCCCc
Confidence 9999999998773 2221111 111111 1122345666678899999999875 579999999999
Q ss_pred ccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCCCCCCeeEEeecccccCCceEEEEEEecCChhh
Q 022346 162 HPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNE 241 (298)
Q Consensus 162 ~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~e 241 (298)
++|+| ++ .++++||+.||||+.+.... +++...+.++++....+++.+....+
T Consensus 275 ~ve~g-t~----------------------~~al~REl~EE~Gl~v~~~~---~l~~~~h~~~h~~~~~~~~~~~~~~~- 327 (369)
T 3fsp_A 275 ETDGA-DG----------------------KEKLEQMVGEQYGLQVELTE---PIVSFEHAFSHLVWQLTVFPGRLVHG- 327 (369)
T ss_dssp ECSSS-CT----------------------HHHHHHHHTTSSSCCEEECC---CCCEEEEECSSEEEEEEEEEEEECCS-
T ss_pred ccCCC-Cc----------------------HHHHHHHHHHHhCCceeeec---ccccEEEEcceEEEEEEEEEEEEcCC-
Confidence 99999 74 69999999999999987665 55555555555444445555543321
Q ss_pred HHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 242 IQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 242 v~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
..|..++.|++++++.++
T Consensus 328 ----------~~e~~~~~Wv~~~el~~~ 345 (369)
T 3fsp_A 328 ----------GPVEEPYRLAPEDELKAY 345 (369)
T ss_dssp ----------SCCCTTEEEEEGGGGGGS
T ss_pred ----------CCCccccEEeeHHHhhhC
Confidence 347789999999999875
No 2
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.81 E-value=3.6e-19 Score=145.96 Aligned_cols=112 Identities=22% Similarity=0.339 Sum_probs=86.7
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.++|++++++.+|+|||++|+...+.++|.|.||||++|+||+ +.+||+||+.||||+
T Consensus 8 ~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~----------------------~~~aa~REl~EE~Gl 65 (153)
T 3grn_A 8 IISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDES----------------------LKEGVAREVWEETGI 65 (153)
T ss_dssp EEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred EEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCC----------------------HHHHHHhhhhhhhCc
Confidence 4567778888899999999998755789999999999999998 479999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+.... +++...+.+.......+++.+....+++. . ..|..++.|++++++.++
T Consensus 66 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 66 TMVPGD---IAGQVNFELTEKKVIAIVFDGGYVVADVK------L-SYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp CCCCCS---EEEEEEEECSSCEEEEEEEEEEECCCCCC------C-CTTEEEEEEECHHHHTTC
T ss_pred Eeecce---EEEEEEEecCCceEEEEEEEEEecCCcEe------c-CCCcceEEEEEHHHhhhc
Confidence 998776 77776555444444444444443433332 2 358899999999999976
No 3
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.78 E-value=2.7e-19 Score=151.12 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=90.9
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
+.+|++++++.+|+|||+||+.. ..++|.|+||||++|+||+ +.+||+||+.||||+
T Consensus 41 ~~~v~v~i~~~~~~vLL~~r~~~-~~~~~~w~~PgG~ve~gEs----------------------~~~aa~REl~EEtGl 97 (182)
T 2yvp_A 41 VAASFVLPVTERGTALLVRQYRH-PTGKFLLEVPAGKVDEGET----------------------PEAAARRELREEVGA 97 (182)
T ss_dssp CEEEEEEEBCTTSEEEEEEEEEG-GGTEEEEECCEEECCTTCC----------------------HHHHHHHHHHHHHCE
T ss_pred CCEEEEEEEcCCCEEEEEEeccC-CCCCcEEEeccccCCCCcC----------------------HHHHHHHHHHHHhCC
Confidence 55778888889999999999865 2568999999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCCh--hhHHhhhccCCCCCcccceEEEcHHHHhchhccCCC-CchhHHH
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQS--NEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPG-CHQGGFA 282 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~--~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~-~~~g~~~ 282 (298)
.+..+. +++.............++|.+.... +++. .+..|..++.|++++++.++...... +.+..++
T Consensus 98 ~~~~~~---~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~------~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~a 168 (182)
T 2yvp_A 98 EAETLI---PLPSFHPQPSFTAVVFHPFLALKARVVTPPT------LEEGELLESLELPLTEVYALLAKGEIQDASTALT 168 (182)
T ss_dssp ECSCEE---ECCCBCSCTTTBCCEEEEEEECSCEECSCCC------CCTTCCEEEEEEEHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcccEE---EEEEEeCCCCccccEEEEEEEeccccCCCCC------CCCCceEEEEEEEHHHHHHHHHcCCcCChHHHHH
Confidence 987654 5554332222222233334443221 1111 45678999999999999998743222 4554444
Q ss_pred HHHHHHHHHh
Q 022346 283 LYKLMVEAMN 292 (298)
Q Consensus 283 ~y~~~~~~~~ 292 (298)
+| ..+..++
T Consensus 169 l~-~~~~~~~ 177 (182)
T 2yvp_A 169 LF-YAEPHLK 177 (182)
T ss_dssp HH-HHHHHHH
T ss_pred HH-HHHHHHH
Confidence 43 3333333
No 4
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.78 E-value=6.3e-19 Score=143.65 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=80.8
Q ss_pred CCcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 125 ~~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
.+-+|++++++.+|++||+++.+.. ..++.|+||||++|+||+ +.+||+||++||||
T Consensus 4 ~~~~v~vi~~~~~~~vLLv~~~r~~-~~~~~w~~PgG~ve~gEt----------------------~~~aa~REl~EEtG 60 (145)
T 2w4e_A 4 GPRAVFILPVTAQGEAVLIRQFRYP-LRATITEIVAGGVEKGED----------------------LGAAAARELLEEVG 60 (145)
T ss_dssp CCEEEEEEEEETTSEEEEEEEEETT-TTEEEEECEEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred eCCEEEEEEEcCCCEEEEEEEEecC-CCCCEEEeCCccCCCCCC----------------------HHHHHHHHHHHhhC
Confidence 3667888888899999998766542 346799999999999998 47999999999999
Q ss_pred CCCCCCCCCeeEEeecccccCCceEEEEEEec-CChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCC-CchhHHH
Q 022346 205 VPSESLCNPLFIGISRRRLNVRPAAFFFIKCS-LQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPG-CHQGGFA 282 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~-~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~-~~~g~~~ 282 (298)
+.+..+. +++.............++|.+. ...+... .+..|..++.|++++++.++...... +.++..+
T Consensus 61 l~~~~~~---~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~------~~~~E~~~~~w~~~~el~~~~~~~~~~~~~~~~a 131 (145)
T 2w4e_A 61 GAASEWV---PLPGFYPQPSISGVVFYPLLALGVTLGAAQ------LEDTETIERVVLPLAEVYRMLEAGEIQDGPSSLT 131 (145)
T ss_dssp EECSEEE---ECCCBBSCTTTCCCEEEEEEEEEEEEC--------------CEEEEEEEHHHHHHHHHHTCCCBHHHHHH
T ss_pred CccCeEE---EEecCcCCCCccCceEEEEEEEecccCCCC------CCCCCeEEEEEEeHHHHHHHHHcCCcCcHHHHHH
Confidence 9887554 4443222111111122222222 1222222 45668899999999999988743222 4554444
Q ss_pred HH
Q 022346 283 LY 284 (298)
Q Consensus 283 ~y 284 (298)
++
T Consensus 132 ~~ 133 (145)
T 2w4e_A 132 LW 133 (145)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 5
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.77 E-value=1.3e-18 Score=140.60 Aligned_cols=133 Identities=21% Similarity=0.335 Sum_probs=91.2
Q ss_pred ccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCC
Q 022346 128 GNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (298)
Q Consensus 128 gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (298)
.+++++++.+|+|||+||... +.++|+|.||||++|++|+ +.+||+||+.||||+.+
T Consensus 10 ~~~~vi~~~~~~vLl~~r~~~-~~~~g~w~lPgG~ve~gE~----------------------~~~aa~RE~~EE~Gl~~ 66 (144)
T 3r03_A 10 VTAAALIDPDGRVLLAQRPPG-KSLAGLWEFPGGKLEPGET----------------------PEAALVRELAEELGVDT 66 (144)
T ss_dssp EEEEEEBCTTSCEEEEECCTT-SSSTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCCBC
T ss_pred EEEEEEEcCCCEEEEEEeCCC-CCCCCcEECCCcEecCCCC----------------------HHHHHHHHHHHHhCcee
Confidence 445667777899999999876 3689999999999999998 57999999999999998
Q ss_pred CCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCchhHHHHHHHH
Q 022346 208 ESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQGGFALYKLM 287 (298)
Q Consensus 208 ~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~~g~~~~y~~~ 287 (298)
..... ..++...+.........++|.+....++ ....|..++.|++++++.++ .+++..+ .+++.+
T Consensus 67 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~--~~~~~~~---~~l~~~ 132 (144)
T 3r03_A 67 RASCL-APLAFASHSYDTFHLLMPLYACRSWRGR--------ATAREGQTLAWVRAERLREY--PMPPADL---PLIPIL 132 (144)
T ss_dssp CGGGC-EEEEEEEEECSSSEEEEEEEEECCCBSC--------CCCCSSCEEEEECGGGGGGS--CCCTTTT---THHHHH
T ss_pred eccce-EEEEeeeccCCCeEEEEEEEEEEecCCc--------cCCCCcceEEEEeHHHhccC--CCCcchH---HHHHHH
Confidence 77641 1233333444445555566666555443 23558889999999999976 4555433 455556
Q ss_pred HHHHhhCCCC
Q 022346 288 VEAMNNIPQN 297 (298)
Q Consensus 288 ~~~~~~~~~~ 297 (298)
.+..+.++.|
T Consensus 133 ~~~~~~~~~~ 142 (144)
T 3r03_A 133 QDWLEGHHHH 142 (144)
T ss_dssp HHHC------
T ss_pred hCcccccccc
Confidence 5555444433
No 6
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.77 E-value=3.3e-19 Score=143.86 Aligned_cols=106 Identities=23% Similarity=0.322 Sum_probs=76.9
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.+++++||+ .||+|||+||. .|.|.||||++|+||+ +.+||+||++||||+
T Consensus 4 ~~aag~vv~-~~~~vLL~~r~------~g~W~~PgG~ve~gEt----------------------~~~aa~RE~~EEtGl 54 (134)
T 3i7u_A 4 EFSAGGVLF-KDGEVLLIKTP------SNVWSFPKGNIEPGEK----------------------PEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEE-ETTEEEEEECT------TSCEECCEEECCTTCC----------------------HHHHHHHHHHHHHSE
T ss_pred EEEEEEEEE-ECCEEEEEEeC------CCcEECCeeEecCCCC----------------------HHHHHHHHHHHhcCc
Confidence 456777776 67999999985 2689999999999999 479999999999999
Q ss_pred CCCCCCCCeeEEeecccc--cCC--ceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchh
Q 022346 206 PSESLCNPLFIGISRRRL--NVR--PAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMA 270 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~--~~~--~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~ 270 (298)
.+.... +++...+.+ .+. ....+||.+....+++. + ..|+.++.|++++++.++.
T Consensus 55 ~~~~~~---~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~------~-~~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 55 KGEILD---YIGEIHYWYTLKGERIFKTVKYYLMKYKEGEPR------P-SWEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp EEEEEE---EEEEEEEEEEETTEEEEEEEEEEEEEEEEECCC------C-CTTSSEEEEEEHHHHHHHB
T ss_pred eEEEee---eeeeeeEEecCCCceEEEEEEEEEEEEcCCcCc------C-ChhheEEEEEEHHHHhhhc
Confidence 887655 666543322 121 12234455554444443 3 3589999999999998763
No 7
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.77 E-value=2.4e-18 Score=144.79 Aligned_cols=117 Identities=17% Similarity=0.190 Sum_probs=85.7
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEc-CCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVF-PGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~-PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
..++++++++.+|+|||++|+.....++|+|+| |||++|+||+ +.+||+||++||||
T Consensus 37 ~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~----------------------~~~aa~REl~EEtG 94 (180)
T 2fkb_A 37 HRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQ----------------------LLESARREAEEELG 94 (180)
T ss_dssp EEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCC----------------------HHHHHHHHHHHHHC
T ss_pred eeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCC----------------------HHHHHHHHHHHHHC
Confidence 346677788888999999998765567999999 9999999998 57999999999999
Q ss_pred CCCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCC
Q 022346 205 VPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMP 274 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~ 274 (298)
+.+..+. +++...+.........++|.+. ..+++. .+..|..++.|++++++.++...++
T Consensus 95 l~~~~~~---~l~~~~~~~~~~~~~~~~f~~~-~~~~~~------~~~~E~~~~~W~~~~el~~~~~~~~ 154 (180)
T 2fkb_A 95 IAGVPFA---EHGQFYFEDKNCRVWGALFSCV-SHGPFA------LQEDEVSEVCWLTPEEITARCDEFT 154 (180)
T ss_dssp CBSCCCE---EEEEEEEEETTEEEEEEEEEEE-CCCCCC------CCTTTEEEEEEECHHHHHTTGGGBC
T ss_pred CCccceE---EEEEEEecCCCceEEEEEEEEe-cCCCcC------CChhHhheEEEecHHHHHHHHHHhC
Confidence 9887665 5665433333323333444444 222322 4567899999999999998754333
No 8
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.77 E-value=1.4e-18 Score=140.34 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=76.6
Q ss_pred cEEEEEeCCCeEEEEEecCCCCC--CCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCC
Q 022346 129 NGAVVETSDKKILLLQRSNNVGE--FPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (298)
Q Consensus 129 V~~vl~~~dg~vLl~rRs~~~~~--~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (298)
|++++. .+|+|||+||+... . ++|+|.||||++|++|+ +.+||+||++||||+.
T Consensus 9 v~~vi~-~~~~vLL~~r~~~~-~~~~~g~w~lPgG~ve~gE~----------------------~~~aa~REl~EE~Gl~ 64 (140)
T 3gwy_A 9 VAAVIR-LGEKYLCVQRGQTK-FSYTSFRYEFPGGKVEEGES----------------------LQEALQREIMEEMDYV 64 (140)
T ss_dssp EEEEEE-ETTEEEEEEC----------CCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCCC
T ss_pred EEEEEE-eCCEEEEEEecCCC-CCCCCCeEECCCccCCCCCC----------------------HHHHHHHHHHHhhCcE
Confidence 455555 48999999998773 4 78999999999999998 4799999999999998
Q ss_pred CCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 207 SESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 207 ~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
+.... +++...+.+.......++|.+....++ .+..|..++.|++++++.++
T Consensus 65 ~~~~~---~~~~~~~~~~~~~~~~~~f~~~~~~~~--------~~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 65 IEVGE---KLLTVHHTYPDFEITMHAFLCHPVGQR--------YVLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp EEEEE---EEEEEECCCSSCCEEEEEEEEEECCSC--------CCCCSSCEEEEECHHHHTTS
T ss_pred EEece---EEEEEEEEeCCceEEEEEEEEEecCCc--------ccccccceeEeccHHHHhhC
Confidence 87665 677655555555555555555544433 23458899999999999976
No 9
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.76 E-value=4.2e-18 Score=139.94 Aligned_cols=116 Identities=20% Similarity=0.184 Sum_probs=84.7
Q ss_pred CcccEEEEEeCCCeEEEEEecCC--CCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhh
Q 022346 126 PLGNGAVVETSDKKILLLQRSNN--VGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~--~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (298)
..++++++++.+|++||+||+.. .+.++|.|+||||++|++|+ +.+||+||+.|||
T Consensus 13 ~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEt 70 (159)
T 1sjy_A 13 LRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGEN----------------------PQDAAVREACEET 70 (159)
T ss_dssp EEEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSC----------------------HHHHHHHHHHHHH
T ss_pred EEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCC----------------------HHHHHHHHHHHHH
Confidence 34667778778899999999862 23578999999999999998 5799999999999
Q ss_pred CCCCCCCCCCeeEEeecccccC-CceEEEEEEecCChhh-HHhhhccCC-CCCcccceEEEcHHHHhchhcc
Q 022346 204 GVPSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNE-IQQLYSTAQ-DGYESTQLFAVSMIELENMASK 272 (298)
Q Consensus 204 Gl~~~~~~~p~~l~~~~~~~~~-~~~~~~~~~~~~~~~e-v~~~~~~~~-d~~E~~~~~wv~~~el~~l~~~ 272 (298)
|+.+.... +++...+.+.. .....++|.+....++ +. . +..|+.++.|++++++.++...
T Consensus 71 Gl~~~~~~---~l~~~~~~~~~~~~~~~~~f~~~~~~~~~~~------~~~~~E~~~~~W~~~~el~~~~~~ 133 (159)
T 1sjy_A 71 GLRVRPVK---FLGAYLGRFPDGVLILRHVWLAEPEPGQTLA------PAFTDEIAEASFVSREDFAQLYAA 133 (159)
T ss_dssp SCCEEEEE---EEEEEEEECTTSCEEEEEEEEEEECSSCCCC------CCCCSSEEEEEEECHHHHHHHHHT
T ss_pred CccceeeE---EEEEEecccCCCceEEEEEEEEEccCCCccc------cCCCCceeEEEEecHHHHHHhhhc
Confidence 99987665 66655433322 3333444555444333 32 3 5678999999999999988643
No 10
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.75 E-value=4e-18 Score=136.95 Aligned_cols=123 Identities=20% Similarity=0.235 Sum_probs=86.6
Q ss_pred ccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCC
Q 022346 128 GNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (298)
Q Consensus 128 gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (298)
.+++++++.+|+|||+||+.. +.++|+|+||||++|++|+ +.+||+||+.||||+.+
T Consensus 10 ~~~~~ii~~~~~vLl~~r~~~-~~~~g~w~lPgG~ve~gE~----------------------~~~aa~RE~~EE~Gl~~ 66 (140)
T 2rrk_A 10 EVVAAIIERDGKILLAQRPAQ-SDQAGLWEFAGGKVEPDES----------------------QRQALVRELREELGIEA 66 (140)
T ss_dssp EEEEEEEEETTEEEEEECCSS-CSCCCCEECCEEECCTTSC----------------------HHHHHHHHHHHHSCEEE
T ss_pred eEEEEEEEcCCEEEEEEcCCC-CCCCCEEECCceecCCCCC----------------------HHHHHHHHHHHHHCCee
Confidence 333444468899999999866 3689999999999999998 57999999999999988
Q ss_pred CCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCchhHHHHHHH
Q 022346 208 ESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQGGFALYKL 286 (298)
Q Consensus 208 ~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~~g~~~~y~~ 286 (298)
.... +++...+.+++.....++|.+....+. ....|..++.|++++++.++ .+++..+-.+..|..
T Consensus 67 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~--~~~~~~~~~l~~~~~ 132 (140)
T 2rrk_A 67 TVGE---YVASHQREVSGRIIHLHAWHVPDFHGT--------LQAHEHQALVWCSPEEALQY--PLAPADIPLLEAFMA 132 (140)
T ss_dssp ECCE---EEEEEEEEETTEEEEEEEEEESEEEEC--------CCCSSCSCEEEECHHHHTTS--CCCTTHHHHHHHHHH
T ss_pred eccc---EEEEEEEecCCcEEEEEEEEEEeeCCC--------cCCCccceeEEeCHHHHhhC--CCChhHHHHHHHHHH
Confidence 7654 666655544444444445555433322 23457889999999999976 355544434444433
No 11
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.75 E-value=2.1e-18 Score=140.59 Aligned_cols=110 Identities=23% Similarity=0.226 Sum_probs=86.3
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
++.+++++++.+|+|||++|... +.++|.|.||||++|++|+ +.+||+||+.||||+
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~-~~~~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE~Gl 77 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPEN-NSLAGQWEFPGGKIENGET----------------------PEEALARELNEELGI 77 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTT-STTTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHSC
T ss_pred eEEEEEEEEEECCEEEEEEeCCC-CCCCCeEECCceeeCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 56666677778899999999877 4789999999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+.... +++...+.+++.....++|.+....++ .+..|..++.|++++++.++
T Consensus 78 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 78 EAEVGE---LKLACTHSYGDVGILILFYEILYWKGE--------PRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp EEECCC---EEEEEEEEETTEEEEEEEEEECEEESC--------CCCSSSSEEEEECGGGGGGS
T ss_pred ccccCc---eEEEEEEecCCCeEEEEEEEEEECCCC--------cCCCccceEEEecHHHhhhC
Confidence 987776 676655555555444555666544332 34568889999999999976
No 12
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.75 E-value=7.8e-18 Score=138.45 Aligned_cols=111 Identities=16% Similarity=0.204 Sum_probs=82.4
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.++|++++++.+++|||+||+.. .++|.|.||||++|++|+ +.+||+||++||||+
T Consensus 18 ~~~v~~vi~~~~~~vLl~~r~~~--~~~g~w~~PgG~ve~gE~----------------------~~~aa~REl~EEtGl 73 (160)
T 1rya_A 18 LVSLDFIVENSRGEFLLGKRTNR--PAQGYWFVPGGRVQKDET----------------------LEAAFERLTMAELGL 73 (160)
T ss_dssp EEEEEEEEECTTSCEEEEEECSS--SSTTSEECCEEECCTTCC----------------------HHHHHHHHHHHHHSS
T ss_pred EEEEEEEEEcCCCEEEEEeccCC--CCCCEEECCccccCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 46778888877999999999875 468999999999999998 579999999999999
Q ss_pred CCC--CCCCCeeEEeecccccCC--------ceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSE--SLCNPLFIGISRRRLNVR--------PAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~--~~~~p~~l~~~~~~~~~~--------~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+. .+. +++...+.+... ....++|.+....+++. .+..|..++.|++++++.++
T Consensus 74 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~------~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 74 RLPITAGQ---FYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELL------LPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp CCCGGGSE---EEEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCC------CCSSSEEEEEEECHHHHHHC
T ss_pred CCCcccce---EEEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccc------cCCCccceEEEecHHHHhhc
Confidence 864 333 666554322211 22334455555544432 45668999999999999975
No 13
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.75 E-value=2.7e-18 Score=135.68 Aligned_cols=106 Identities=28% Similarity=0.279 Sum_probs=79.7
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
++++++++++.+|+|||+||+. |.|.||||++|++|+ +.+||+||++||||+
T Consensus 2 ~~~~~~vi~~~~~~vLl~~r~~------g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE~Gl 53 (126)
T 1vcd_A 2 ELGAGGVVFNAKREVLLLRDRM------GFWVFPKGHPEPGES----------------------LEEAAVREVWEETGV 53 (126)
T ss_dssp EEEEEEEEECTTSCEEEEECTT------SCEECCEECCCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred eeEEEEEEEcCCCEEEEEEECC------CCccCCcCcCCCCCC----------------------HHHHHHHHHHHhhCc
Confidence 5788889998899999999874 789999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+.... +++...+...+.....++|.+....++. .+..|..++.|++++++.++
T Consensus 54 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~e~~~~~w~~~~el~~~ 107 (126)
T 1vcd_A 54 RAEVLL---PLYPTRYVNPKGVEREVHWFLMRGEGAP-------RLEEGMTGAGWFSPEEARAL 107 (126)
T ss_dssp EEEEEE---EEEEEEEECTTSCEEEEEEEEEEEESCC-------CCCTTCCEEEEECHHHHHHH
T ss_pred Eeeecc---EEeEEEEecCCceEEEEEEEEEEcCCCC-------CCCcceeeeEEcCHHHHHHh
Confidence 887655 6666544333433333444443333221 33468899999999999976
No 14
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.74 E-value=4.6e-18 Score=146.15 Aligned_cols=128 Identities=14% Similarity=0.155 Sum_probs=86.9
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
+-+|++++++.+ +|||+||.+. +..+|.|+||||++|+||+ +.+||+||++||||+
T Consensus 49 ~~av~vl~~~~~-~vLLvrq~r~-~~~~~~welPgG~ve~gEs----------------------~~~aA~REl~EEtGl 104 (198)
T 1vhz_A 49 REAVMIVPIVDD-HLILIREYAV-GTESYELGFSKGLIDPGES----------------------VYEAANRELKEEVGF 104 (198)
T ss_dssp CCEEEEEEEETT-EEEEEEEEET-TTTEEEEECEEEECCTTCC----------------------HHHHHHHHHHHHHSE
T ss_pred CCEEEEEEEECC-EEEEEEcccC-CCCCcEEEeCcccCCCCcC----------------------HHHHHHHHHHHHHCC
Confidence 456676667666 9999998765 3568899999999999998 479999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCChh-hHHhhhccCCCCCcccceEEEcHHHHhchhccCCC-CchhHHHH
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSN-EIQQLYSTAQDGYESTQLFAVSMIELENMASKMPG-CHQGGFAL 283 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~-ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~-~~~g~~~~ 283 (298)
.+..+. +++.............++|.+..... .. ..+..|..++.|++++++.++...... ++++.+++
T Consensus 105 ~~~~~~---~l~~~~~~~~~~~~~~~~f~a~~~~~~~~------~~~~~E~~~~~w~~~~el~~~~~~~~i~~~~~~~al 175 (198)
T 1vhz_A 105 GANDLT---FLKKLSMAPSYFSSKMNIVVAQDLYPESL------EGDEPEPLPQVRWPLAHMMDLLEDPDFNEARNVSAL 175 (198)
T ss_dssp EEEEEE---EEEEEECCTTTCCCEEEEEEEEEEEECCC------CCCCSSCCCEEEEEGGGGGGGGGCTTTCBHHHHHHH
T ss_pred CcCceE---EEEEEeCCCCccCcEEEEEEEEeCCcccC------CCCCCceEEEEEEEHHHHHHHHHcCCCCCHHHHHHH
Confidence 987665 56654332222122222233322111 11 145678899999999999998754333 46655555
Q ss_pred HHH
Q 022346 284 YKL 286 (298)
Q Consensus 284 y~~ 286 (298)
+..
T Consensus 176 ~~~ 178 (198)
T 1vhz_A 176 FLV 178 (198)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 15
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.74 E-value=6.1e-18 Score=141.11 Aligned_cols=121 Identities=12% Similarity=0.046 Sum_probs=87.7
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEE-cCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFV-FPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~-~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
..++++++++.+|+|||+||+...+.++|+|+ ||||++|++|+ +.+||+||++||||
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs----------------------~~~aa~REl~EEtG 91 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGET----------------------YEEAFRREAREELN 91 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSC----------------------HHHHHHHHHHHHHS
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCC----------------------HHHHHHHHHHHHHC
Confidence 45677778888999999999776656799998 99999999998 47999999999999
Q ss_pred CCCCCCCCCeeEEeec-ccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCc
Q 022346 205 VPSESLCNPLFIGISR-RRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCH 277 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~-~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~ 277 (298)
+.+.... ...++... +...... ..++|.+.. .+++. .+..|+.++.|++++++.++...++...
T Consensus 92 l~~~~~~-l~~~~~~~~~~~~~~~-~~~~f~~~~-~~~~~------~~~~E~~~~~W~~~~el~~~~~~~~~~~ 156 (171)
T 1q27_A 92 VEIDALS-WRPLASFSPFQTTLSS-FMCVYELRS-DATPI------FNPNDISGGEWLTPEHLLARIAAGEAAK 156 (171)
T ss_dssp CTTSSSC-EEEEEEECSSSSCCSS-EEEEEEEEC-CCCCC------SCTTTCSCCEEECHHHHHHHHHHHSSCC
T ss_pred Ccccccc-eEEEEEEeccCCCCcc-EEEEEEEEE-CCccc------cCchhhheEEEecHHHHHHHHhcCCCCc
Confidence 9987753 12444433 3332222 334445544 33332 4566889999999999998765555543
No 16
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.74 E-value=1.2e-17 Score=137.54 Aligned_cols=118 Identities=22% Similarity=0.321 Sum_probs=86.8
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCC
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (298)
..+++++++.+|+|||+||... +.++|.|.||||++|++|+ +.+||+||+.||||+.
T Consensus 30 ~~~~~~i~~~~~~vLL~~r~~~-~~~~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEtGl~ 86 (158)
T 3hhj_A 30 IVVACALLDQDNRVLLTQRPEG-KSLAGLWEFPGGKVEQGET----------------------PEASLIRELEEELGVH 86 (158)
T ss_dssp EEEEEEEBCTTSEEEEEECCCT-TSCCCCCBCCEEECCTTCC----------------------HHHHHHHHHHHHHCCB
T ss_pred EEEEEEEEeCCCEEEEEEeCCC-CCCCCEEECCceeecCCCC----------------------HHHHHHHHHHHHhCcE
Confidence 3456667778899999999876 4789999999999999998 5799999999999999
Q ss_pred CCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCch
Q 022346 207 SESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQ 278 (298)
Q Consensus 207 ~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~~ 278 (298)
+..... ..++...+.+.+.....++|.+....+. .+..|..++.|++++++.++ .++...+
T Consensus 87 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~--~~~~~~~ 147 (158)
T 3hhj_A 87 VQADNL-FPLTFASHGYETFHLLMPLYFCSHYKGV--------AQGREGQNLKWIFINDLDKY--PMPEADK 147 (158)
T ss_dssp CCGGGC-EEEEEEEEECSSCEEEEEEEEESCCBSC--------CCCTTSCEEEEEEGGGGGGS--CCCTTTH
T ss_pred eecceE-EEEEEEeeccCCcEEEEEEEEEEECCCc--------cCCccccceEEEcHHHHhhC--CCCcchH
Confidence 877641 1244444444455555566666554432 33568889999999999876 3555444
No 17
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.73 E-value=5e-18 Score=135.42 Aligned_cols=105 Identities=23% Similarity=0.295 Sum_probs=76.7
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
..+|++++++ +|+|||+||+. |.|.||||++|++|+ +.+||+||++||||+
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE~Gl 54 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEK----------------------PEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCC----------------------HHHHHHHHHHHHHSE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECCccccCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 4567777775 78999999964 899999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeeccccc--C--CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGISRRRLN--V--RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~--~--~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+.... +++...+.+. + .....++|.+....+++. ... |..++.|++++++.++
T Consensus 55 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-e~~~~~W~~~~el~~~ 112 (134)
T 2pbt_A 55 KGEILD---YIGEIHYWYTLKGERIFKTVKYYLMKYKEGEPR------PSW-EVKDAKFFPIKEAKKL 112 (134)
T ss_dssp EEEEEE---EEEEEEEEEEETTEEEEEEEEEEEEEEEEECCC------CCT-TSSEEEEEEHHHHHHH
T ss_pred ccEEee---eeeEEEEEeeCCCcEEEEEEEEEEEEecCCCcC------CCc-ceeEEEEEcHHHHHhh
Confidence 987665 6665433222 1 122334455544443332 233 8899999999999976
No 18
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.73 E-value=5.2e-18 Score=146.66 Aligned_cols=163 Identities=11% Similarity=0.013 Sum_probs=99.0
Q ss_pred CcCCcCCcceeeeceEeecCCCCCCcceEEEEecCcccccccccCCCcchhhccCCCCchhhhhccccCCcccEEEEEeC
Q 022346 57 NKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQHTASPLGNGAVVETS 136 (298)
Q Consensus 57 ~p~lfng~~f~~~~~~~~~~~~~~~~~~~~l~lg~T~yr~~v~T~~~p~~~~~~~~~~~~~~~~~~~~~~~gV~~vl~~~ 136 (298)
...+|+|+.|.+....+. +..|.+..++++ ..+-+|++++++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~------------~p~G~~~~~~~~-------------------------~~~~av~v~i~~~ 53 (207)
T 1mk1_A 11 SETLHTGAIFALRRDQVR------------MPGGGIVTREVV-------------------------EHFGAVAIVAMDD 53 (207)
T ss_dssp EEEEEECSSEEEEEEEEC-----------------CEEEEEE-------------------------EECCEEEEEECCT
T ss_pred EEEEEeCCEEEEEEEEEE------------CCCCCEEEEEEE-------------------------eCCCEEEEEEEcC
Confidence 345899998888777662 334444333333 1255777888888
Q ss_pred CCeEEEEEecCCCCCCCCcEEcCCcccC-CCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCCCCCCee
Q 022346 137 DKKILLLQRSNNVGEFPGHFVFPGGHPE-PQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLF 215 (298)
Q Consensus 137 dg~vLl~rRs~~~~~~~g~w~~PGG~vE-~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~~~~p~~ 215 (298)
+|+|||+||.+.. .++|.|+||||++| ++|+ +.+||+||+.||||+.+..+. +
T Consensus 54 ~~~vLLvrr~r~~-~~~~~w~lPgG~ve~~gEs----------------------~~~aa~REl~EEtGl~~~~~~---~ 107 (207)
T 1mk1_A 54 NGNIPMVYQYRHT-YGRRLWELPAGLLDVAGEP----------------------PHLTAARELREEVGLQASTWQ---V 107 (207)
T ss_dssp TSEEEEEEEEETT-TTEEEEECCEEECCSTTCC----------------------HHHHHHHHHHHHHCEEEEEEE---E
T ss_pred CCEEEEEEeecCC-CCCcEEEeCCccccCCCCC----------------------HHHHHHHHHHHHHCCcccccE---E
Confidence 9999999988663 56899999999999 9998 479999999999999887665 5
Q ss_pred EEeecccccCCce-EEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCC-CchhHHHHHHH
Q 022346 216 IGISRRRLNVRPA-AFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPG-CHQGGFALYKL 286 (298)
Q Consensus 216 l~~~~~~~~~~~~-~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~-~~~g~~~~y~~ 286 (298)
++.. +...+... ..++|.+......... ...+..|..++.|++++++.++...... +.+..++++..
T Consensus 108 l~~~-~~~~~~~~~~~~~f~~~~~~~~~~~---~~~~~~E~~~~~Wv~~~el~~~~~~~~i~~~~~~~al~~~ 176 (207)
T 1mk1_A 108 LVDL-DTAPGFSDESVRVYLATGLREVGRP---EAHHEEADMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAV 176 (207)
T ss_dssp EEEE-CSCTTTBCCCEEEEEEEEEEECCC-------------CEEEEEHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred EEEE-EcCCCccccEEEEEEEEccccCCCC---CCCCCCceEEEEEEEHHHHHHHHHcCCcCCHHHHHHHHHH
Confidence 5544 22222211 2222333222211110 0134568899999999999998754333 34444444443
No 19
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.73 E-value=2.4e-17 Score=134.76 Aligned_cols=108 Identities=20% Similarity=0.254 Sum_probs=77.7
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.++|++++ ..+|+|||+||+. ..+|.|.||||++|+||+ +.+||+||++||||+
T Consensus 5 ~~~v~~ii-~~~~~vLl~~r~~---~~~~~w~~PgG~ve~gEs----------------------~~~aa~REl~EEtGl 58 (153)
T 3shd_A 5 HVTVACVV-HAEGKFLVVEETI---NGKALWNQPAGHLEADET----------------------LVEAAARELWEETGI 58 (153)
T ss_dssp EEEEEEEE-EETTEEEEEEEEE---TTEEEEECSEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred ceEEEEEE-EeCCEEEEEEecC---CCCCCEECCeEEeCCCCC----------------------HHHHHHHHHHHHHCc
Confidence 34455544 4689999999983 347899999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccC-CceEEEEEEecCChhh-HHhhhccCCCCCcccceEEEcHHHHhc
Q 022346 206 PSESLCNPLFIGISRRRLNV-RPAAFFFIKCSLQSNE-IQQLYSTAQDGYESTQLFAVSMIELEN 268 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~-~~~~~~~~~~~~~~~e-v~~~~~~~~d~~E~~~~~wv~~~el~~ 268 (298)
.+.... ++++....... .....++|.+...... .. .+..|..++.|++++++..
T Consensus 59 ~~~~~~---~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~------~~~~E~~~~~W~~~~el~~ 114 (153)
T 3shd_A 59 SAQPQH---FIRMHQWIAPDKTPFLRFLFAIELEQICPTQ------PHDSDIDCCRWVSAEEILQ 114 (153)
T ss_dssp CCCCCE---EEEEEEECCTTSCCEEEEEEEEECSSCCCCC------CCSTTCCEEEEECHHHHHT
T ss_pred ccccCc---EEEEEEEecCCCceEEEEEEEEEccccCcCC------CCcccceeeEEecHHHhhc
Confidence 988765 67765333322 2333344555444332 12 4567899999999999943
No 20
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.73 E-value=3.6e-18 Score=135.19 Aligned_cols=112 Identities=18% Similarity=0.341 Sum_probs=79.9
Q ss_pred EEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCCC
Q 022346 131 AVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESL 210 (298)
Q Consensus 131 ~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~~ 210 (298)
+++++.+|+|||+||+.. +.++|+|+||||++|++|++ .+||+||+.||||+.+...
T Consensus 9 ~ii~~~~~~vLl~~r~~~-~~~~g~w~~PgG~~e~gE~~----------------------~~aa~RE~~EE~G~~~~~~ 65 (129)
T 1mut_A 9 GIIRNENNEIFITRRAAD-AHMANKLEFPGGKIEMGETP----------------------EQAVVRELQEEVGITPQHF 65 (129)
T ss_dssp EECEETTTEEEEEECSSC-CSSSCCEECCCCCSSSCSST----------------------THHHHHHHHTTTCCSSCEE
T ss_pred EEEEecCCEEEEEEeCCC-CCCCCeEECCccCcCCCCCH----------------------HHHHHHHHHHHhCCccccc
Confidence 345578899999999876 37899999999999999985 4999999999999998765
Q ss_pred CCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCch
Q 022346 211 CNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQ 278 (298)
Q Consensus 211 ~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~~ 278 (298)
. +++...+.++......++|.+....+. ....|..++.|++++++.++ .+++..+
T Consensus 66 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~--~~~~~~~ 120 (129)
T 1mut_A 66 S---LFEKLEYEFPDRHITLWFWLVERWEGE--------PWGKEGQPGEWMSLVGLNAD--DFPPANE 120 (129)
T ss_dssp C---CCCCCBCCCSSCEEECCCEEEEECSSC--------CCCCSSCCCEEEESSSCCTT--TSCTTCH
T ss_pred e---EEEEEEEecCCceEEEEEEEEEccCCc--------cCCcccceeEEeCHHHcccc--cCCchhH
Confidence 5 455444444443333333444333222 23457889999999999876 3554443
No 21
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.72 E-value=1e-17 Score=138.85 Aligned_cols=116 Identities=19% Similarity=0.244 Sum_probs=83.7
Q ss_pred CcccEEEEEeCC-CeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 126 PLGNGAVVETSD-KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 126 ~~gV~~vl~~~d-g~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
.++|.+++++.+ ++|||+||+.. .++|.|+||||++|++|+ +.+||+||+.||||
T Consensus 10 ~~~v~~vi~~~~~~~vLL~~r~~~--~~~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 65 (161)
T 3exq_A 10 ELVTMVMVTDPETQRVLVEDKVNV--PWKAGHSFPGGHVEVGEP----------------------CATAAIREVFEETG 65 (161)
T ss_dssp EEEEEEEEBCTTTCCEEEECCCCC--TTTCSBBCCCCBCCTTSC----------------------HHHHHHHHHHHHHC
T ss_pred eEEEEEEEEeCCCCEEEEEEccCC--CCCCCEEccceecCCCCC----------------------HHHHHHHHHHHhhC
Confidence 345566666555 69999999843 688899999999999998 57999999999999
Q ss_pred CCCCCCCCCeeEEeecccc--cCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCch
Q 022346 205 VPSESLCNPLFIGISRRRL--NVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQ 278 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~~~~--~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~~ 278 (298)
+.+.... ++++..... .......+++.+....+++ ...|..++.|++++++.++ .+++..+
T Consensus 66 l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~e~~~~~W~~~~el~~~--~~~~~~~ 128 (161)
T 3exq_A 66 LRLSGVT---FCGTCEWFDDDRQHRKLGLLYRASNFTGTL--------KASAEGQLSWLPITALTRE--NSAASLP 128 (161)
T ss_dssp CEESCCE---EEEEEEEECSSCSSEEEEEEEEECCEESCC--------CGGGTTTEEEECGGGCCTT--TBCTTHH
T ss_pred cEecCCc---EEEEEecccCCCCeEEEEEEEEEeccCCcc--------CCCccceEEEeeHHHhhhC--ccChHHH
Confidence 9987665 677654433 2334445556665544432 2457788999999999876 3444433
No 22
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.72 E-value=1.2e-17 Score=139.53 Aligned_cols=125 Identities=13% Similarity=0.120 Sum_probs=81.0
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
+.+|++++++ +|++||+||.+.. .++|.|+||||++|++|+ +.+||+||+.||||+
T Consensus 34 ~~~v~vii~~-~~~vLL~~~~r~~-~~~~~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 89 (170)
T 1v8y_A 34 KPAVAVIALR-EGRMLFVRQMRPA-VGLAPLEIPAGLIEPGED----------------------PLEAARRELAEQTGL 89 (170)
T ss_dssp CCEEEEEEEE-TTEEEEEECCBTT-TTBCCBBCSEEECCTTCC----------------------HHHHHHHHHHHHHSE
T ss_pred CCeEEEEEEE-CCEEEEEEEEeCC-CCCCEEECCccccCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 5677788887 9999999987653 578999999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCCh-hhHHhhhccCCCCCcccceEEEcHHHHhchhcc--CCCCchhHHH
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQS-NEIQQLYSTAQDGYESTQLFAVSMIELENMASK--MPGCHQGGFA 282 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~-~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~--~~~~~~g~~~ 282 (298)
+..+. +++.............++|.+.... .... .+..|..++.|++++++.++... +..++++.++
T Consensus 90 -~~~~~---~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~------~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~a 159 (170)
T 1v8y_A 90 -SGDLT---YLFSYFVSPGFTDEKTHVFLAENLKEVEAH------PDEDEAIEVVWMRPEEALERHQRGEVEFSATGLVG 159 (170)
T ss_dssp -EEEEE---EEEEEESCTTTBCCEEEEEEEEEEEECC--------------CEEEEECHHHHHHHHHTTSCCBCHHHHHH
T ss_pred -CcCce---eeEEEecCCCccccEEEEEEEEeccccCCC------CCCCceEEEEEEEHHHHHHHHHCCCEecCHHHHHH
Confidence 66554 5555432222212223333333222 1221 35668999999999999998743 3314555444
Q ss_pred HH
Q 022346 283 LY 284 (298)
Q Consensus 283 ~y 284 (298)
++
T Consensus 160 l~ 161 (170)
T 1v8y_A 160 VL 161 (170)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 23
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.72 E-value=4.9e-17 Score=138.01 Aligned_cols=135 Identities=16% Similarity=0.202 Sum_probs=85.3
Q ss_pred cccEEEEEe---C----CCeEEEEEecC-----CCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHH
Q 022346 127 LGNGAVVET---S----DKKILLLQRSN-----NVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDS 194 (298)
Q Consensus 127 ~gV~~vl~~---~----dg~vLl~rRs~-----~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~a 194 (298)
++|+++++. . +++|||+||+. ....++|.|.||||++|+||+ +.+|
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs----------------------~~~a 85 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENES----------------------AEQA 85 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSC----------------------HHHH
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCC----------------------HHHH
Confidence 566655553 1 45899999965 223678999999999999998 5799
Q ss_pred HHHhhhhhhCCCCCCCCCCeeEEeeccccc---CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhc
Q 022346 195 ITREVVEEIGVPSESLCNPLFIGISRRRLN---VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMAS 271 (298)
Q Consensus 195 a~REl~EEtGl~~~~~~~p~~l~~~~~~~~---~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~ 271 (298)
|+||++|||||.+..+. ++++...... .+....+|+.. ......... ....|..++.|++++++.++
T Consensus 86 a~REl~EEtGl~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~E~~~~~W~~~~el~~~-- 155 (187)
T 3i9x_A 86 AERELEEETSLTDIPLI---PFGVFDKPGRDPRGWIISRAFYAI-VPPEALEKR----AAGDDAAEIGLFPMTEALEL-- 155 (187)
T ss_dssp HHHHHHHHHCCCSCCCE---EEEEECCTTSSTTSSEEEEEEEEE-CCHHHHHHH----HHSTTTTTEEEEEHHHHTTS--
T ss_pred HHHHHHHHHCCCCcceE---EEEEEcCCccCCCCCEEEEEEEEE-EcCcccCCc----CCCCceeEEEEEeHHHcccC--
Confidence 99999999999887766 7776543221 12222222222 222221100 23458889999999999965
Q ss_pred cCCCCchhHHH-HHHHHHHHHhh
Q 022346 272 KMPGCHQGGFA-LYKLMVEAMNN 293 (298)
Q Consensus 272 ~~~~~~~g~~~-~y~~~~~~~~~ 293 (298)
.+...++..+. .++.++...++
T Consensus 156 ~l~~~~~~il~~a~~~l~~~~~~ 178 (187)
T 3i9x_A 156 PLAFDHLDMLKKAFSAITEEFLL 178 (187)
T ss_dssp CBSTTHHHHHHHHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHHHHhhhhc
Confidence 34444444444 23334433433
No 24
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.71 E-value=2.4e-18 Score=141.33 Aligned_cols=112 Identities=21% Similarity=0.242 Sum_probs=74.4
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
..+|++++++.+|+|||++|+ +|.|.||||++|++|+ +.+||+||++|||||
T Consensus 21 ~~~v~~ii~~~~~~vLL~~r~------~~~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 72 (153)
T 3eds_A 21 XPSVAAVIKNEQGEILFQYPG------GEYWSLPAGAIELGET----------------------PEEAVVREVWEETGL 72 (153)
T ss_dssp EEEEEEEEBCTTCCEEEECC---------CBBCSEEECCTTSC----------------------HHHHHHHHHHHHHCE
T ss_pred eeeEEEEEEcCCCeEEEEEcC------CCcEECCccccCCCCC----------------------HHHHHHHHHHHHHCc
Confidence 456677777888999999887 5899999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeec-----ccccC-Cc--eEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCC
Q 022346 206 PSESLCNPLFIGISR-----RRLNV-RP--AAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMP 274 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~-----~~~~~-~~--~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~ 274 (298)
.+.... ++++.. ..+.. .. ...++|.+....+++. .+..|..++.|++++++.++.-..|
T Consensus 73 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~------~~~~E~~~~~W~~~~el~~l~~~~p 140 (153)
T 3eds_A 73 KVQVKK---QKGVFGGKEYRYTYSNGDEVEYIVVVFECEVTSGELR------SIDGESLKLQYFSLSEKPPLALPYP 140 (153)
T ss_dssp EEEEEE---EEEEECSGGGEEECTTSCEEEEEEEEEEEEEEEECCC-------------CEEEECGGGCCCBSSCCC
T ss_pred cceeee---EEEEecccceeeecCCCCeEEEEEEEEEEEecCCccc------cCCCcEEEEEEECHHHCchhcccCc
Confidence 987665 666542 11122 11 1234455544444433 4456889999999999998864444
No 25
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.71 E-value=1.8e-17 Score=137.40 Aligned_cols=112 Identities=21% Similarity=0.241 Sum_probs=73.8
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
...+++++++.+|+|||+||+...+.++|.|.||||++|++|+ +.+||+||++||||+
T Consensus 27 ~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~----------------------~~~aa~REl~EEtGl 84 (165)
T 3oga_A 27 QRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGER----------------------IEEALRREIREELGE 84 (165)
T ss_dssp EEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCC----------------------HHHHHHHHHHHHHCS
T ss_pred eEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCC----------------------HHHHHHHHHHHHhCC
Confidence 4445555666889999999997766789999999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEee------cccccCCc-----eEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGIS------RRRLNVRP-----AAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~------~~~~~~~~-----~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+.... ++++. ...+.... ...+++.+....+.+. ...|..++.|++++++.++
T Consensus 85 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 85 QLILSD---ITPWTFRDDIRIKTYADGRQEEIYMIYLIFDCVSANRDIC-------INDEFQDYAWVKPEELALY 149 (165)
T ss_dssp SCCEEE---EEEEEEEEEEEEEEC--CCEEEEEEEEEEEEEEESCCCCC-------CCTTEEEEEEECGGGGGGS
T ss_pred Cccccc---eeeeeeecceeeEecCCCCceeEEEEEEEEEeeccCCCcc-------CCchheeeEEccHHHHhhC
Confidence 987554 43321 11222111 1223444443333322 2358899999999999976
No 26
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.71 E-value=8.7e-18 Score=138.67 Aligned_cols=111 Identities=20% Similarity=0.239 Sum_probs=82.1
Q ss_pred CCcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 125 ~~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
..++|++++++ +|+|||+||+.. .++|.|.||||++|++|+ +.+||+||++||||
T Consensus 28 ~~~~v~~vi~~-~~~vLL~~r~~~--~~~~~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 82 (157)
T 4dyw_A 28 PRVGCGAAIVR-DGRILLIKRKRA--PEAGCWGLPGGKVDWLEP----------------------VERAVCREIEEELG 82 (157)
T ss_dssp CEEEEEEEEEE-TTEEEEEEECSS--SSTTCEECCEEECCTTCC----------------------HHHHHHHHHHHHHS
T ss_pred ceeEEEEEEEE-CCEEEEEEecCC--CCCCEEECCcccCCCCCC----------------------HHHHHHHHHHHHHC
Confidence 45677777775 899999999975 378999999999999998 57999999999999
Q ss_pred CCCCCCCCCeeEEeeccccc--CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhc
Q 022346 205 VPSESLCNPLFIGISRRRLN--VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELEN 268 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~~~~~--~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~ 268 (298)
|.+.... ++++..+.+. ......++|.+....+++. ..+..|..++.|++++++.+
T Consensus 83 l~~~~~~---~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-----~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 83 IALERAT---LLCVVDHIDAANGEHWVAPVYLAHAFSGEPR-----VVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp CEEESCE---EEEEEEEEETTTTEEEEEEEEEESEEESCCC-----CSCTTTEEEEEEEETTSCCS
T ss_pred cccccCc---EEEEEEeeccCCCcEEEEEEEEEEEcCCCcc-----cCCCCcEeEEEEECHHHccc
Confidence 9987765 6666544332 2223334455544333322 13456899999999999886
No 27
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.71 E-value=2.7e-17 Score=137.19 Aligned_cols=114 Identities=18% Similarity=0.218 Sum_probs=76.6
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.++|+++++ .+|+|||+||... +|.|+||||++|++|+ +.+||+||++||||+
T Consensus 23 ~~~v~~ii~-~~~~vLL~~r~~~----~~~w~~PgG~ve~gEs----------------------~~~aa~REl~EEtGl 75 (171)
T 3id9_A 23 QVRVTGILI-EDEKVLLVKQKVA----NRDWSLPGGRVENGET----------------------LEEAMIREMREETGL 75 (171)
T ss_dssp EEEEEEEEE-ETTEEEEEECSST----TCCEECCEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred EEEEEEEEE-ECCEEEEEEEECC----CCeEECCCccCCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 556777776 5799999999864 6999999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchh
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMA 270 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~ 270 (298)
.+.... ++++............+++.+....+++... ....+..|..++.|++++++.++.
T Consensus 76 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~E~~~~~w~~~~el~~~~ 136 (171)
T 3id9_A 76 EVKIKK---LLYVCDKPDASPSLLHITFLLERIEGEITLP-SNEFDHNPIHDVQMVPINELSYYG 136 (171)
T ss_dssp CEEEEE---EEEEEEETTSSSCEEEEEEEEEEC--------------CCCCCEEEEETGGGGGGT
T ss_pred ccccce---EEEEEcccCCCCcEEEEEEEEEEcCCcccCC-ccCCCcCeeeeEEEEeHHHHhhCC
Confidence 986554 6666543332222233334444444443310 011356789999999999999873
No 28
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.71 E-value=1.4e-16 Score=129.66 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=84.6
Q ss_pred CCcccEEEEE---eCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhh
Q 022346 125 SPLGNGAVVE---TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (298)
Q Consensus 125 ~~~gV~~vl~---~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (298)
.+.+|.++++ +.+++|||++|+.. |.|.||||++|+||+ +.+||+||++|
T Consensus 4 ~~~~v~vvi~~~~~~~~~vLl~~r~~~-----g~w~~PgG~ve~gE~----------------------~~~aa~REl~E 56 (149)
T 3son_A 4 QPFQVLVIPFIKTEANYQFGVLHRTDA-----DVWQFVAGGGEDEEA----------------------ISETAKRESIE 56 (149)
T ss_dssp CCCEEEEEEEEECSSSEEEEEEEESSS-----SCEECEEEECCTTCC----------------------HHHHHHHHHHH
T ss_pred CceEEEEEEEEecCCCeEEEEEEEcCC-----CCEeCCccccCCCCC----------------------HHHHHHHHHHH
Confidence 4666766665 56679999999863 899999999999998 57999999999
Q ss_pred hhCCCCCCCCCCeeEEee-----cccccC-CceEEEEEEecCC--hhhHHhhhccCCCCCcccceEEEcHHHHhchhccC
Q 022346 202 EIGVPSESLCNPLFIGIS-----RRRLNV-RPAAFFFIKCSLQ--SNEIQQLYSTAQDGYESTQLFAVSMIELENMASKM 273 (298)
Q Consensus 202 EtGl~~~~~~~p~~l~~~-----~~~~~~-~~~~~~~~~~~~~--~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~ 273 (298)
||||.+.... ..+.++. ...+.. .....++|.+... .+++. . ..|+.++.|++++++.++. +
T Consensus 57 EtGl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~------~-~~E~~~~~W~~~~el~~~~--~ 126 (149)
T 3son_A 57 ELNLDVDVKM-YSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTSCSYQVT------L-SLEHSELRWVSYESAIQLL--E 126 (149)
T ss_dssp HHTCCSCCCE-EEEEEEEEEEGGGTCSSSCSEEEEEEEEEECTTTGGGCC------C-CTTEEEEEEECHHHHHHHC--C
T ss_pred HhCCCcccce-EEEEeeecccceeeccCCceEeEEEEEEEEcCCCCCccc------C-CCceeeEEEeCHHHHHHHh--c
Confidence 9999987631 0122221 111121 2333445556555 33433 3 3689999999999999763 2
Q ss_pred CCCchhHHHHHHHHHHHHhhC
Q 022346 274 PGCHQGGFALYKLMVEAMNNI 294 (298)
Q Consensus 274 ~~~~~g~~~~y~~~~~~~~~~ 294 (298)
.+. ...++..+.+.++++
T Consensus 127 ~~~---~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 127 WDS---NKTALYELNERLKNN 144 (149)
T ss_dssp CHH---HHHHHHHHHHHHHTT
T ss_pred CHH---HHHHHHHHHHHHhhc
Confidence 222 334455555555443
No 29
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.71 E-value=3e-17 Score=131.64 Aligned_cols=113 Identities=21% Similarity=0.213 Sum_probs=76.3
Q ss_pred CcccEEEEEeC---CCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhh
Q 022346 126 PLGNGAVVETS---DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEE 202 (298)
Q Consensus 126 ~~gV~~vl~~~---dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EE 202 (298)
..++++++++. +++|||+||+. .+|.|.||||++|++|+ +.+||+||++||
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE 56 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGED----------------------EWQAAIRETKEE 56 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTCC----------------------HHHHHHHHHHHH
T ss_pred eEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCCC----------------------HHHHHHHHHHHH
Confidence 34567777755 46899999973 26899999999999998 579999999999
Q ss_pred hCCCCCCCCCC-eeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchh
Q 022346 203 IGVPSESLCNP-LFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMA 270 (298)
Q Consensus 203 tGl~~~~~~~p-~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~ 270 (298)
||+.+..+... .+++...+.........++|.+....+... .+..|..++.|++++++.++.
T Consensus 57 tGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~------~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 57 ANITKEQLTIHEDCHETLFYEAKGKPKSVKYWLAKLNNPDDV------QLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp HCCCGGGEEEEEEEEEEEEEEETTEEEEEEEEEEEECSCCCC------CCCTTEEEEEEECHHHHHHHH
T ss_pred HCCCccceEEeccccceEEEEeCCCceEEEEEEEEecCCccc------CCCchhcEeEeccHHHHHHhh
Confidence 99977655411 122332222223233334444544332111 345689999999999999863
No 30
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.70 E-value=1.2e-17 Score=137.87 Aligned_cols=107 Identities=21% Similarity=0.148 Sum_probs=76.9
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.++|++++++ +|+|||+||+. +|.|.||||++|+||+ +.+||+||++|||||
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 57 (159)
T 3f6a_A 6 HFTVSVFIVC-KDKVLLHLHKK-----AKKMLPLGGHIEVNEL----------------------PEEACIREAKEEAGL 57 (159)
T ss_dssp CEEEEEEEEE-TTEEEEEECSS-----SCCEECEEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred eEEEEEEEEE-CCEEEEEEcCC-----CCeEECCccCccCCCC----------------------HHHHHHHHHHHHhCC
Confidence 5667777775 88999999874 4899999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeec--------------------ccc-cCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHH
Q 022346 206 PSESLCNPLFIGISR--------------------RRL-NVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMI 264 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~--------------------~~~-~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~ 264 (298)
.+.... ++++.. +.+ .......++|.+....+++. .+..|..++.|++++
T Consensus 58 ~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~------~~~~E~~~~~W~~~~ 128 (159)
T 3f6a_A 58 NVTLYN---PIDINLKKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETS------PEIGESKILKWYSKE 128 (159)
T ss_dssp CCEECC---CCCHHHHHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCC------CCTTSCCCEEEECSS
T ss_pred Cceecc---cccccccccccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcC------CCCCcccceEEeeHH
Confidence 987665 332210 001 11112223455555544443 456799999999999
Q ss_pred HHhch
Q 022346 265 ELENM 269 (298)
Q Consensus 265 el~~l 269 (298)
++.++
T Consensus 129 el~~~ 133 (159)
T 3f6a_A 129 DLKNA 133 (159)
T ss_dssp SSTTC
T ss_pred HHhhC
Confidence 99876
No 31
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.69 E-value=3.7e-17 Score=137.68 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=79.6
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
+..++++++..+|+|||++|... .++|.|.||||++|++|+ +.+||+||++||||+
T Consensus 24 ~~~~~~~vi~~~~~vLL~~r~~~--~~~g~W~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 79 (176)
T 3q93_A 24 SRLYTLVLVLQPQRVLLGMKKRG--FGAGRWNGFGGKVQEGET----------------------IEDGARRELQEESGL 79 (176)
T ss_dssp EEEEEEEEEECSSEEEEEEECSS--TTTTSEECEEEECCTTSC----------------------HHHHHHHHHHHHHSC
T ss_pred CcEEEEEEEEeCCEEEEEEEcCC--CCCCeEECceecCCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 33344455668899999999654 578999999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccC--CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGISRRRLNV--RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~--~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+..+. +++...+.+.. .....++|.+....+++ ...|..++.|++++++.++
T Consensus 80 ~~~~~~---~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~--------~~~e~~~~~W~~~~el~~~ 134 (176)
T 3q93_A 80 TVDALH---KVGQIVFEFVGEPELMDVHVFCTDSIQGTP--------VESDEMRPCWFQLDQIPFK 134 (176)
T ss_dssp EESCCE---EEEEEEEEETTCSCEEEEEEEEESCEESCC--------CCCSSEEEEEEETTCCCGG
T ss_pred cceeeE---EEEEEEEEcCCCCcEEEEEEEEEECCCCCc--------CCCcceeeEEeeHHHcccc
Confidence 987665 77765444333 23334555665444332 2346678899999999876
No 32
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.69 E-value=4.3e-17 Score=138.65 Aligned_cols=113 Identities=15% Similarity=0.137 Sum_probs=82.0
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEc-CCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVF-PGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~-PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.+|++++++.+|+|||+||+.....++|.|+| |||++|+||+ +.+||+||++||||+
T Consensus 33 ~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt----------------------~~~aa~REl~EEtGl 90 (190)
T 1hzt_A 33 LAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGES----------------------NEDAVIRRCRYELGV 90 (190)
T ss_dssp ECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred EEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 36777888889999999998765568999999 9999999998 579999999999999
Q ss_pred CCCCC-CCCeeEEeeccc--cc-CC--ceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhc
Q 022346 206 PSESL-CNPLFIGISRRR--LN-VR--PAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMAS 271 (298)
Q Consensus 206 ~~~~~-~~p~~l~~~~~~--~~-~~--~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~ 271 (298)
.+..+ . +++..... +. +. ....++|.+... +++. .+..|+.++.|++++++.++..
T Consensus 91 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~------~~~~E~~~~~W~~~~el~~~~~ 152 (190)
T 1hzt_A 91 EITPPES---IYPDFRYRATDPSGIVENEVCPVFAARTT-SALQ------INDDEVMDYQWCDLADVLHGID 152 (190)
T ss_dssp CBSCCEE---EETTCEEEEECTTSCEEEEECCEEEEEBC-SCCC------CCTTTEEEEEEECHHHHHHHHH
T ss_pred Cchhhhe---eeeeEEEEeeCCCCCcceEEEEEEEEecC-CCCc------CCccceeeEEEecHHHHHHHHH
Confidence 98766 3 44432211 11 11 111223344332 2332 4567999999999999998864
No 33
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.68 E-value=6e-17 Score=138.10 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=78.1
Q ss_pred CcccEEEEEeCCC--eEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhh
Q 022346 126 PLGNGAVVETSDK--KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (298)
Q Consensus 126 ~~gV~~vl~~~dg--~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (298)
+.++++++++.+| +|||+||+...+.++|.|+||||++|++|+ +.+||+||++|||
T Consensus 34 ~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEt 91 (194)
T 1nqz_A 34 RRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGET----------------------PTQAALREAQEEV 91 (194)
T ss_dssp EEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCC----------------------HHHHHHHHHHHHH
T ss_pred ceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCC----------------------HHHHHHHHHHHHH
Confidence 4455556667888 999999987645678999999999999998 5799999999999
Q ss_pred CCCCCCCCCCeeEEeecccccCCceEEEEEEecCChh-h-HHhhhccCCCCCcccceEEEcHHHH-hchh
Q 022346 204 GVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSN-E-IQQLYSTAQDGYESTQLFAVSMIEL-ENMA 270 (298)
Q Consensus 204 Gl~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~-e-v~~~~~~~~d~~E~~~~~wv~~~el-~~l~ 270 (298)
|+.+..+. +++...+.........++|.+....+ + .. .+..|+.++.|++++++ .+..
T Consensus 92 Gl~~~~~~---~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~------~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 92 ALDPAAVT---LLGELDDVFTPVGFHVTPVLGRIAPEALDTL------RVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp CCCGGGCE---EEEECCCEEETTTEEEEEEEEEECGGGGGGC------CCCTTEEEEECCBHHHHHHSCC
T ss_pred CCCccceE---EEEEccCccCCCCeEEEEEEEEecCCccccC------CCccceeEEEEEEHHHhccCCC
Confidence 99987765 67665433322222233333433321 1 22 56679999999999999 6643
No 34
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.68 E-value=3.2e-16 Score=135.73 Aligned_cols=136 Identities=13% Similarity=0.017 Sum_probs=85.8
Q ss_pred CCcccEEEEEe-CCCeEEEEEecCCCCC----CCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhh
Q 022346 125 SPLGNGAVVET-SDKKILLLQRSNNVGE----FPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (298)
Q Consensus 125 ~~~gV~~vl~~-~dg~vLl~rRs~~~~~----~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (298)
++-+|++++++ .+++|||+|+.+.... .++.|+||||++|+||+ +.+||+||+
T Consensus 56 ~~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~----------------------~~~aA~REl 113 (209)
T 1g0s_A 56 RGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGES----------------------VEDVARREA 113 (209)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCC----------------------HHHHHHHHH
T ss_pred CCCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcC----------------------HHHHHHHHH
Confidence 35677888887 5789999987654211 26889999999999998 479999999
Q ss_pred hhhhCCCCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCC-Cch
Q 022346 200 VEEIGVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPG-CHQ 278 (298)
Q Consensus 200 ~EEtGl~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~-~~~ 278 (298)
+||||+.+..+. +++.............++|.+.......... ....+..|..++.|++++++.++...... +++
T Consensus 114 ~EEtGl~~~~~~---~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~-~~~~~e~E~~~~~w~~~~el~~~i~~g~i~d~~ 189 (209)
T 1g0s_A 114 IEEAGLIVKRTK---PVLSFLASPGGTSERSSIMVGEVDATTASGI-HGLADENEDIRVHVVSREQAYQWVEEGKIDNAA 189 (209)
T ss_dssp HHHHCCCCCCEE---EEEEEESCTTTBCCEEEEEEEECCGGGCC---------CCSCEEEEEEHHHHHHHHHTTSSCBHH
T ss_pred HHHcCcccCcEE---EeEEEecCCCccCcEEEEEEEEEccccccCC-CCCCCCCcEEEEEEEEHHHHHHHHHcCCCCCHH
Confidence 999999997665 5654422211111222333333222111000 00145668889999999999998755443 466
Q ss_pred hHHHHHHH
Q 022346 279 GGFALYKL 286 (298)
Q Consensus 279 g~~~~y~~ 286 (298)
+.++++..
T Consensus 190 t~~al~~~ 197 (209)
T 1g0s_A 190 SVIALQWL 197 (209)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65555443
No 35
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.67 E-value=1.4e-16 Score=129.12 Aligned_cols=111 Identities=19% Similarity=0.171 Sum_probs=77.5
Q ss_pred CCcccEEEEEeCC-CeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhh
Q 022346 125 SPLGNGAVVETSD-KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (298)
Q Consensus 125 ~~~gV~~vl~~~d-g~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (298)
.+++|++++++.+ |++||+||+.. +|.|.||||++|+||+ +.+||+||++|||
T Consensus 8 ~~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEt 61 (150)
T 2o1c_A 8 RPVSILVVIYAQDTKRVLMLQRRDD----PDFWQSVTGSVEEGET----------------------APQAAMREVKEEV 61 (150)
T ss_dssp CSEEEEEEEEETTTCEEEEEECSSS----TTCEESEEEECCTTCC----------------------HHHHHHHHHHHHH
T ss_pred CceEEEEEEEeCCCCEEEEEEecCC----CCceECCccccCCCCC----------------------HHHHHHHHHHHHh
Confidence 4678888888775 99999998764 6899999999999998 4799999999999
Q ss_pred CCCCCCCCCCeeEEeec-----------cccc-C-CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 204 GVPSESLCNPLFIGISR-----------RRLN-V-RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 204 Gl~~~~~~~p~~l~~~~-----------~~~~-~-~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
|+.+.... ..++++.. +.+. + .....++|.+....+.. ....|..++.|++++++.++
T Consensus 62 Gl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~-------~~~~E~~~~~W~~~~el~~~ 132 (150)
T 2o1c_A 62 TIDVVAEQ-LTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQ-------IVFTEHLAYKWLDAPAAAAL 132 (150)
T ss_dssp CCCHHHHT-CCEEEEEEEEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCC-------CCCSSSSCEEEEEHHHHHHH
T ss_pred CCCccccc-eeEEeeeceeeeeeecccccccCCCCcceEEEEEEEEcCCCCC-------cChhHhhccEeecHHHHHhh
Confidence 99886532 01443321 1111 1 12333444444333222 12368899999999999976
No 36
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.67 E-value=1.9e-16 Score=135.50 Aligned_cols=134 Identities=13% Similarity=0.245 Sum_probs=78.2
Q ss_pred CcccEEEEEeCCC-eEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 126 PLGNGAVVETSDK-KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 126 ~~gV~~vl~~~dg-~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
.+++++++++.++ +|||+||.. +|.|.||||++|+||+ +.+||+||++||||
T Consensus 45 h~~~~~vv~~~~~~~vLL~~r~~-----~g~w~lPgG~ve~gEs----------------------~~eaa~REl~EEtG 97 (197)
T 3fcm_A 45 HLTSSAFAVNKERNKFLMIHHNI-----YNSWAWTGGHSDNEKD----------------------QLKVAIKELKEETG 97 (197)
T ss_dssp EEEEEEEEECTTSCEEEEEEETT-----TTEEECEEEECTTCCB----------------------HHHHHHHHHHHHHC
T ss_pred cEEEEEEEEECCCCEEEEEEecC-----CCCEECCccccCCCCC----------------------HHHHHHHHHHHHHC
Confidence 3566778887776 999999873 4799999999999999 57999999999999
Q ss_pred CC-CCCCC-CCeeEEeeccc---ccCC--c--e-EEEEEEecCChh-hHHhhhccCCCCCcccceEEEcHHHHhchhccC
Q 022346 205 VP-SESLC-NPLFIGISRRR---LNVR--P--A-AFFFIKCSLQSN-EIQQLYSTAQDGYESTQLFAVSMIELENMASKM 273 (298)
Q Consensus 205 l~-~~~~~-~p~~l~~~~~~---~~~~--~--~-~~~~~~~~~~~~-ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~ 273 (298)
|. +.... .+..+...... ..+. + . ..+++.+....+ .+. .+..|+.++.|++++++.++..
T Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~E~~~~~W~~~~el~~~~~-- 169 (197)
T 3fcm_A 98 VKNPTPLLDKAFALDVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLM------LKEDENSGVMWIPFNEISKYCS-- 169 (197)
T ss_dssp CSSCEESCSSCSEEEEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCC------CCC----CEEEEEGGGHHHHCC--
T ss_pred CCcccccCCCceEEEEeeecCccccCcccCCceeEEEEEEEEeCCCcccC------CCcccccceEEccHHHHHhhcC--
Confidence 98 43221 11122211100 0011 0 0 001122222222 122 4567999999999999998742
Q ss_pred CCCchhHHHHHHHHHHHHhhCCCC
Q 022346 274 PGCHQGGFALYKLMVEAMNNIPQN 297 (298)
Q Consensus 274 ~~~~~g~~~~y~~~~~~~~~~~~~ 297 (298)
.+ ....++..+.+.++++.++
T Consensus 170 ~~---~~~~il~~~~~~l~~~~~~ 190 (197)
T 3fcm_A 170 EP---HMIPIYEKLINKLKTQSKE 190 (197)
T ss_dssp CG---GGHHHHHHHHHHHHC----
T ss_pred CH---HHHHHHHHHHHHHHhcccc
Confidence 11 2345666676777665544
No 37
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.67 E-value=3e-17 Score=134.75 Aligned_cols=110 Identities=22% Similarity=0.298 Sum_probs=79.1
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCC
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (298)
..|++++++.+++|||+||+.. .++|.|.||||++|++|+ +.+||+||++||||+.
T Consensus 21 ~~v~~~i~~~~~~vLl~~r~~~--~~~~~w~~PgG~ve~gE~----------------------~~~aa~REl~EEtGl~ 76 (156)
T 3gg6_A 21 YVVLAVFLSEQDEVLLIQEAKR--ECRGSWYLPAGRMEPGET----------------------IVEALQREVKEEAGLH 76 (156)
T ss_dssp EEEEEECBCTTSEEEEEECCCT--TSTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCEE
T ss_pred EEEEEEEEeCCCEEEEEEecCC--CCCCEEECCeeeccCCCC----------------------HHHHHHHHHHHhhCce
Confidence 3456677778999999999865 478999999999999998 5799999999999998
Q ss_pred CCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 207 SESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 207 ~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
+.... ++++..+.. . ...++|.+....+++.. ...+..|..++.|++++++.++
T Consensus 77 ~~~~~---~~~~~~~~~-~--~~~~~f~~~~~~~~~~~---~~~~~~E~~~~~W~~~~el~~~ 130 (156)
T 3gg6_A 77 CEPET---LLSVEERGP-S--WVRFVFLARPTGGILKT---SKEADAESLQAAWYPRTSLPTP 130 (156)
T ss_dssp EEEEE---EEEEEESST-T--EEEEEEEEEEEEECCCC---GGGCSSSCSEEEEEETTSCCSS
T ss_pred eEeee---EEEEEcCCC-C--EEEEEEEEEeeCCeecc---CCCCCcceeeeEEEcHHHCccc
Confidence 87665 676654321 1 12233334333333220 0134568999999999999865
No 38
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.67 E-value=1e-16 Score=130.79 Aligned_cols=111 Identities=21% Similarity=0.202 Sum_probs=77.5
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.++|.+++ ..+|+|||+||+... . +|.|.||||++|++|+ +.+||+||++||||+
T Consensus 8 ~~~v~~ii-~~~~~vLl~~r~~~~-~-~~~w~lPgG~ve~gE~----------------------~~~aa~RE~~EEtGl 62 (153)
T 2b0v_A 8 NVTVAAVI-EQDDKYLLVEEIPRG-T-AIKLNQPAGHLEPGES----------------------IIQACSREVLEETGH 62 (153)
T ss_dssp EEEEEEEC-EETTEEEEEEECSSS-S-CCEEECSEEECCTTSC----------------------HHHHHHHHHHHHHSE
T ss_pred CEEEEEEE-eeCCEEEEEEEcCCC-C-CCeEECCCcCcCCCCC----------------------HHHHHHHHHHHhhCc
Confidence 34455544 478999999998763 4 8999999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccC--CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGISRRRLNV--RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~--~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+.... ++++..+.... .....++|.+....+... .....|..++.|++++++.++
T Consensus 63 ~~~~~~---~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-----~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 63 SFLPEV---LTGIYHWTCASNGTTYLRFTFSGQVVSFDPD-----RKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEE---EEEEEEEEETTTTEEEEEEEEEEEEEEECTT-----SCCCTTEEEEEEEEHHHHHHT
T ss_pred Eeccce---EEEEEEEeCCCCCcEEEEEEEEEEeCCCCCC-----CCCCCCeeeEEEecHHHHhhh
Confidence 987654 66654333222 122223344433322211 133568899999999999986
No 39
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.67 E-value=2.6e-16 Score=129.61 Aligned_cols=131 Identities=21% Similarity=0.238 Sum_probs=82.5
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
..+|++++++.+|+|||+||+.. +|.|+||||++|++|+ +.+||+||++|||||
T Consensus 14 ~~~v~~~i~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEtGl 67 (165)
T 1f3y_A 14 RRNVGICLMNNDKKIFAASRLDI----PDAWQMPQGGIDEGED----------------------PRNAAIRELREETGV 67 (165)
T ss_dssp CCEEEEEEECTTSCEEEEEETTE----EEEEECCEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred eeeEEEEEECCCCcEEEEecCCC----CCcEECCeeccCCCCC----------------------HHHHHHHHHHHhhCC
Confidence 45677788888999999999743 5899999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEe--eccccc----------------CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHh
Q 022346 206 PSESLCNPLFIGI--SRRRLN----------------VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELE 267 (298)
Q Consensus 206 ~~~~~~~p~~l~~--~~~~~~----------------~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~ 267 (298)
.+..+. .... ..+.+. +....+|.+.+.....++... ....+..|..++.|++++++.
T Consensus 68 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~-~~~~~~~E~~~~~W~~~~el~ 143 (165)
T 1f3y_A 68 TSAEVI---AEVPYWLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLL-GDGSEKPEFGEWSWVTPEQLI 143 (165)
T ss_dssp CSEEEE---EECSSCCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCC-CCSSSCCSEEEEEEECHHHHH
T ss_pred Chhhhh---cccccceeeecCccccccccccccccccCceEEEEEEEecCCccccccc-CCCCCCChhheeEEecHHHHH
Confidence 874321 1100 111111 112233333332222222200 001246689999999999999
Q ss_pred chhccCCCCchhHHHHHHHHHHHHh
Q 022346 268 NMASKMPGCHQGGFALYKLMVEAMN 292 (298)
Q Consensus 268 ~l~~~~~~~~~g~~~~y~~~~~~~~ 292 (298)
++...+ ....|..+.+.++
T Consensus 144 ~~~~~~------~~~~~~~~~~~l~ 162 (165)
T 1f3y_A 144 DLTVEF------KKPVYKEVLSVFA 162 (165)
T ss_dssp HHBCGG------GHHHHHHHHHHHG
T ss_pred HHhhhh------hHHHHHHHHHHhh
Confidence 874221 2355555555554
No 40
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.67 E-value=2e-16 Score=130.12 Aligned_cols=100 Identities=25% Similarity=0.330 Sum_probs=67.9
Q ss_pred eCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCCCCCCe
Q 022346 135 TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPL 214 (298)
Q Consensus 135 ~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~~~~p~ 214 (298)
+.++++||++|+.. +|.|.||||++|+||+ +.+||+||++||||+.+....
T Consensus 21 n~~~e~LL~~r~~~----~~~W~lPgG~ve~gEt----------------------~~~aa~REl~EEtGl~~~~~~--- 71 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWTPPKGHVEPGED----------------------DLETALRETQEEAGIEAGQLT--- 71 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEECSEEECCSSCC----------------------HHHHHHHHHHHHHCCCGGGEE---
T ss_pred CCCcEEEEEEecCC----CCCEECCeeeccCCCC----------------------HHHHHHHHHHHHHCCccccce---
Confidence 34568999999865 5899999999999999 479999999999999887654
Q ss_pred eEEeecc----cccCCce--EEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchh
Q 022346 215 FIGISRR----RLNVRPA--AFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMA 270 (298)
Q Consensus 215 ~l~~~~~----~~~~~~~--~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~ 270 (298)
+++.... ....... .+|++.+......+ ...+|+.++.|++++|+.++.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~E~~~~~W~~~~ea~~~~ 126 (155)
T 3u53_A 72 IIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEI-------RLSHEHQAYRWLGLEEACQLA 126 (155)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEESCTTCCC-------CCCTTEEEEEEECHHHHHHHH
T ss_pred eeeeEeeeeecCCCcceeEEEEEEEEEeccCCcc-------CCCcceeEEEEeEHHHHHHHc
Confidence 4433211 1111122 22223332222222 234589999999999998764
No 41
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.66 E-value=3.1e-16 Score=128.75 Aligned_cols=107 Identities=20% Similarity=0.270 Sum_probs=76.3
Q ss_pred cEEEEEeC---CCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHH-HHHHHhhhhhhC
Q 022346 129 NGAVVETS---DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMF-DSITREVVEEIG 204 (298)
Q Consensus 129 V~~vl~~~---dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~-~aa~REl~EEtG 204 (298)
+.++|.+. +|+|||+||... +.++|+|+||||++|++|+ .. +|++||+.||||
T Consensus 22 ~~~vi~~~~~~~~~vLl~~R~~~-~~~~g~w~~PgG~~e~gE~----------------------~~~~a~~REl~EE~g 78 (155)
T 1x51_A 22 ATCVLEQPGALGAQILLVQRPNS-GLLAGLWEFPSVTWEPSEQ----------------------LQRKALLQELQRWAG 78 (155)
T ss_dssp EEEEEEEECSSSEEEEEEECCCC-STTCSCEECCEEECCSSHH----------------------HHHHHHHHHHHHHSC
T ss_pred EEEEEEecCCCCCEEEEEECCCC-CCCCceecCCccccCCCCC----------------------HHHHHHHHHHHHHhC
Confidence 34445544 589999999875 5789999999999999998 44 999999999999
Q ss_pred -CCCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 205 -VPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 205 -l~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
+.+.... +++...+.++++....++|.+....+++ ...|..++.|++++++.++
T Consensus 79 ~l~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 79 PLPATHLR---HLGEVVHTFSHIKLTYQVYGLALEGQTP--------VTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp CCCSTTCE---ECCCBCCBCSSCEEEEEEEEEECSSCCC--------CCCCCTTEEEEEHHHHHHS
T ss_pred Ccceeeee---ecceEEEecCCccEEEEEEEEEEcCCCC--------CCCCCCccEEccHHHhhhc
Confidence 8766544 5554445554444444445554443322 2346778999999999875
No 42
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.66 E-value=4.1e-16 Score=126.42 Aligned_cols=109 Identities=21% Similarity=0.287 Sum_probs=71.0
Q ss_pred cEEEEEeCC-CeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCC
Q 022346 129 NGAVVETSD-KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (298)
Q Consensus 129 V~~vl~~~d-g~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (298)
+++++++.+ ++|||+||.. +|.|.||||++|+||+ +.+||+||++||||+.+
T Consensus 7 ~~~~i~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gEs----------------------~~~aa~RE~~EEtGl~~ 59 (146)
T 2jvb_A 7 RGAAIFNENLSKILLVQGTE-----SDSWSFPRGKISKDEN----------------------DIDCCIREVKEEIGFDL 59 (146)
T ss_dssp EEEEEBCTTSSEEEEECCSS-----SSCCBCCEECCCSSSC----------------------HHHHHHHHHHHHTSCCC
T ss_pred EEEEEEeCCCCEEEEEEEcC-----CCcEECCcccCCCCCC----------------------HHHHHHHHHHHHHCCCc
Confidence 455666665 8999998764 4899999999999998 57999999999999988
Q ss_pred CCCCCCeeEEeecccccCCceEEEEEEecCChh-hHHhhhccCCCCCcccceEEEcHHHHhchhcc
Q 022346 208 ESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSN-EIQQLYSTAQDGYESTQLFAVSMIELENMASK 272 (298)
Q Consensus 208 ~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~-ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~ 272 (298)
..+.. +..+......+....+|+ .+..... ... ..+..|+.++.|++++++.++...
T Consensus 60 ~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~E~~~~~W~~~~el~~~~~~ 117 (146)
T 2jvb_A 60 TDYID--DNQFIERNIQGKNYKIFL-ISGVSEVFNFK-----PQVRNEIDKIEWFDFKKISKTMYK 117 (146)
T ss_dssp SSSSC--SSCEEEEEETTEEEEEEE-ECCCCSSSCCC-----CCCSSSCCCEEEEEHHHHHTGGGC
T ss_pred hHhcc--cccccccccCCceEEEEE-EEeccccccCC-----cCCcchhheeEEeEHHHHHhhhcc
Confidence 76431 111111111222222222 2211111 111 134668999999999999987643
No 43
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.66 E-value=1.6e-16 Score=127.85 Aligned_cols=106 Identities=17% Similarity=0.263 Sum_probs=75.6
Q ss_pred CCcccEEEEEe--CCCe--EEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhh
Q 022346 125 SPLGNGAVVET--SDKK--ILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVV 200 (298)
Q Consensus 125 ~~~gV~~vl~~--~dg~--vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~ 200 (298)
..++|+++++. .+|+ |||+||+.. ++.|.||||++|++|+ +.+||+||++
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~PgG~ve~gE~----------------------~~~aa~RE~~ 61 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYP----PVGLALPGGFVEVGER----------------------VEEAAAREMR 61 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECCEEECCTTCC----------------------HHHHHHHHHH
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECccccCCCCCC----------------------HHHHHHHHHH
Confidence 35667777775 6788 999999865 3459999999999998 5799999999
Q ss_pred hhhCCCCCCCCCCeeEEeeccccc--CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHh
Q 022346 201 EEIGVPSESLCNPLFIGISRRRLN--VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELE 267 (298)
Q Consensus 201 EEtGl~~~~~~~p~~l~~~~~~~~--~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~ 267 (298)
||||+.+.... ++++..+... ......++|.+.. .+++ ....|..++.|++++++.
T Consensus 62 EEtGl~~~~~~---~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~-------~~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 62 EETGLEVRLHK---LMGVYSDPERDPRAHVVSVVWIGDA-QGEP-------KAGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp HHHCCCCEEEE---EEEEECCTTSCTTSCEEEEEEEEEE-ESCC-------CCCTTEEEEEEECTTSCC
T ss_pred HHHCCCcccce---EEEEECCCCcCCCceEEEEEEEEec-CCcc-------CCCCCcceEEEEEHHHCC
Confidence 99999987554 6666543221 1223333444433 2332 234588999999999998
No 44
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.65 E-value=2.2e-16 Score=129.25 Aligned_cols=114 Identities=24% Similarity=0.321 Sum_probs=76.3
Q ss_pred CcccEEEEEeCCCe----EEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhh
Q 022346 126 PLGNGAVVETSDKK----ILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (298)
Q Consensus 126 ~~gV~~vl~~~dg~----vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (298)
..+|++++.+ +++ ||+++|+.. .++| |.||||++|++|+ +.+||+||+.|
T Consensus 8 ~~~~~~ii~~-~~~~~~~vLl~~r~~~--~~~g-w~lPgG~ve~gE~----------------------~~~aa~RE~~E 61 (155)
T 2b06_A 8 ILTNICLIED-LETQRVVMQYRAPENN--RWSG-YAFPGGHVENDEA----------------------FAESVIREIYE 61 (155)
T ss_dssp EEEEEEEEEE-TTTTEEEEEEEC-------CCE-EECCCCBCCTTSC----------------------HHHHHHHHHHH
T ss_pred EEEEEEEEEE-CCCCeEEEEEEECCCC--CCCC-EeccceecCCCCC----------------------HHHHHHHHHHH
Confidence 4556666664 667 999888766 3678 9999999999998 57999999999
Q ss_pred hhCCCCCCCCCCeeEEeeccccc-CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCch
Q 022346 202 EIGVPSESLCNPLFIGISRRRLN-VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQ 278 (298)
Q Consensus 202 EtGl~~~~~~~p~~l~~~~~~~~-~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~~ 278 (298)
|||+.+.... ++++...... +.....+++.+....++ ....|..++.|++++++.++. +++..+
T Consensus 62 EtGl~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~~--~~~~~~ 126 (155)
T 2b06_A 62 ETGLTIQNPQ---LVGIKNWPLDTGGRYIVICYKATEFSGT--------LQSSEEGEVSWVQKDQIPNLN--LAYDML 126 (155)
T ss_dssp HHSEEEESCE---EEEEEEEECTTSCEEEEEEEEECEEEEC--------CCCBTTBEEEEEEGGGGGGSC--BCTTHH
T ss_pred HhCccccCCc---EEEEEeeccCCCceEEEEEEEEEecCCC--------CCCCcceeeEEeeHHHhhhCC--CChhHH
Confidence 9999987665 6665443322 23333445555433322 223578899999999999763 444443
No 45
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.65 E-value=2.3e-16 Score=135.31 Aligned_cols=118 Identities=24% Similarity=0.339 Sum_probs=76.5
Q ss_pred cccCCcccEEEEEeC-CCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhh
Q 022346 122 HTASPLGNGAVVETS-DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVV 200 (298)
Q Consensus 122 ~~~~~~gV~~vl~~~-dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~ 200 (298)
+..+.++|++++++. +++|||+||... .+|.|.||||++|+||+ +.+||+||++
T Consensus 22 ~~~~~v~v~~~v~~~~~~~vLL~~r~~~---~~g~w~lPGG~ve~gEs----------------------~~~aA~REl~ 76 (199)
T 3h95_A 22 SMSHQVGVAGAVFDESTRKILVVQDRNK---LKNMWKFPGGLSEPEED----------------------IGDTAVREVF 76 (199)
T ss_dssp ----CCEEEEEEEETTTTEEEEEEESSS---STTSBBCCEEECCTTCC----------------------HHHHHHHHHH
T ss_pred cCcccceEEEEEEeCCCCEEEEEEEcCC---CCCCEECCccccCCCCC----------------------HHHHHHHHHH
Confidence 345688887777765 489999998653 47999999999999998 5799999999
Q ss_pred hhhCCCCCCCCCCeeEEeec-ccccC-CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhc
Q 022346 201 EEIGVPSESLCNPLFIGISR-RRLNV-RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMAS 271 (298)
Q Consensus 201 EEtGl~~~~~~~p~~l~~~~-~~~~~-~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~ 271 (298)
|||||.+.... ++++.. ....+ .....+|+.+........ ...+..|+.++.|++++++.++..
T Consensus 77 EEtGl~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~E~~~~~W~~~~el~~~~~ 142 (199)
T 3h95_A 77 EETGIKSEFRS---VLSIRQQHTNPGAFGKSDMYIICRLKPYSFT----INFCQEECLRCEWMDLNDLAKTEN 142 (199)
T ss_dssp HHHCCCEEEEE---EEEEEECC---------CEEEEEEEEESCCC----CCCCTTTEEEEEEEEHHHHHHCSS
T ss_pred HHhCCccccce---EEEEEeeecCCCCceeEEEEEEEEEcCCCcc----cCCCccceeeeEEEeHHHHhhhhh
Confidence 99999977544 555422 11211 111112222222211111 114567999999999999998753
No 46
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.65 E-value=5.4e-16 Score=132.33 Aligned_cols=134 Identities=13% Similarity=0.048 Sum_probs=84.9
Q ss_pred CCcccEEEEEeC-CCeEEEEEecCCC----CC-CCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHh
Q 022346 125 SPLGNGAVVETS-DKKILLLQRSNNV----GE-FPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITRE 198 (298)
Q Consensus 125 ~~~gV~~vl~~~-dg~vLl~rRs~~~----~~-~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~RE 198 (298)
.+-+|++++++. ++++||+|+.+.. +. .++.|+||||++| ||+ +.+||+||
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~----------------------~~~aa~RE 100 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDE----------------------PEVCIRKE 100 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSC----------------------HHHHHHHH
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCC----------------------HHHHHHHH
Confidence 356677777774 5899999987531 11 5789999999999 998 47999999
Q ss_pred hhhhhCCCCCCCCCCeeEEeecccccCCceEEEEEEecCChh-hHHhhhccCCCCCcccceEEEcHHHHhchhccCCC-C
Q 022346 199 VVEEIGVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSN-EIQQLYSTAQDGYESTQLFAVSMIELENMASKMPG-C 276 (298)
Q Consensus 199 l~EEtGl~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~-ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~-~ 276 (298)
++||||+.+..+. +++.............++|.+..... .+.. ......|..++.|++++++.++...... +
T Consensus 101 l~EEtG~~~~~~~---~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~---~~~~~~E~~~~~w~~~~el~~~~~~g~i~d 174 (191)
T 3o6z_A 101 AIEETGYEVGEVR---KLFELYMSPGGVTELIHFFIAEYSDNQRANA---GGGVEDEAIEVLELPFSQALEMIKTGEIRD 174 (191)
T ss_dssp HHHHC-CCCSCEE---EEEEEESCTTTBCCEEEEEEEECCTTCC-----------CCSSEEEEEEHHHHHHHHHHSSCCB
T ss_pred HHHHhCCccCcEE---EEEEEEeCCCccCcEEEEEEEEEcccccccC---CCCCCCcEEEEEEEEHHHHHHHHHcCCCCC
Confidence 9999999987665 66654322211222223333333321 1110 0011568999999999999998754333 5
Q ss_pred chhHHHHHHHH
Q 022346 277 HQGGFALYKLM 287 (298)
Q Consensus 277 ~~g~~~~y~~~ 287 (298)
+++.++++...
T Consensus 175 ~~t~~al~~~~ 185 (191)
T 3o6z_A 175 GKTVLLLNYLQ 185 (191)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666665443
No 47
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.65 E-value=6.9e-16 Score=136.50 Aligned_cols=122 Identities=17% Similarity=0.160 Sum_probs=83.2
Q ss_pred CCcccEEEEE---eCCCeEEEEEecCCCCCCCCcEEcCCcccCC--CCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhh
Q 022346 125 SPLGNGAVVE---TSDKKILLLQRSNNVGEFPGHFVFPGGHPEP--QDAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (298)
Q Consensus 125 ~~~gV~~vl~---~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~--~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (298)
..++|.++|+ +.+++|||++|+.. .++|.|.+|||++|+ +|+ +.+||+||+
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~~--~~~g~W~lPGG~ve~~~gEs----------------------~~~AA~REl 76 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSNH--PFLGLWGLPGGFIDETCDES----------------------LEQTVLRKL 76 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCSS--SSTTCEECSEEECCTTTCSB----------------------HHHHHHHHH
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcCC--CCCCCEECCccccCCCCCcC----------------------HHHHHHHHH
Confidence 4577777776 33459999999864 568999999999999 998 579999999
Q ss_pred hhhhCCCCCCCCCCeeEEeecccc--cCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCc
Q 022346 200 VEEIGVPSESLCNPLFIGISRRRL--NVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCH 277 (298)
Q Consensus 200 ~EEtGl~~~~~~~p~~l~~~~~~~--~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~ 277 (298)
+||||+.+..+. .++...... .......+++.+....+... ....|..++.|++++++.+. .+..++
T Consensus 77 ~EEtGl~~~~~~---~l~~~~~~~r~~~~~~~~~~y~a~~~~~~~~------~~~~e~~~~~W~~~~el~~~--~l~~dh 145 (240)
T 3gz5_A 77 AEKTAVVPPYIE---QLCTVGNNSRDARGWSVTVCYTALMSYQACQ------IQIASVSDVKWWPLADVLQM--PLAFDH 145 (240)
T ss_dssp HHHHSSCCSEEE---EEEEEEESSSSTTSCEEEEEEEEECCHHHHH------HHHTTCTTEEEEEHHHHTTS--CCSTTH
T ss_pred HHHHCCCCCcee---eEEEeCCCccCCCceEEEEEEEEEecccccC------CCCCcccceEEecHHHcccC--CcchhH
Confidence 999999987665 555543321 22222223333434444433 12457889999999999743 344455
Q ss_pred hhHH
Q 022346 278 QGGF 281 (298)
Q Consensus 278 ~g~~ 281 (298)
...+
T Consensus 146 ~~il 149 (240)
T 3gz5_A 146 LQLI 149 (240)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 48
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.64 E-value=2e-16 Score=136.49 Aligned_cols=110 Identities=21% Similarity=0.338 Sum_probs=79.5
Q ss_pred cccCCcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhh
Q 022346 122 HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (298)
Q Consensus 122 ~~~~~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (298)
|....++|+++|++ +|+|||+||+. +|.|.||||++|+||+ +.+||+||++|
T Consensus 64 ~~~~~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lPgG~ve~gEs----------------------~~~aa~REl~E 115 (205)
T 3q1p_A 64 YQTPKVDIRAVVFQ-NEKLLFVKEKS-----DGKWALPGGWADVGYT----------------------PTEVAAKEVFE 115 (205)
T ss_dssp SCCCEEEEEEEEEE-TTEEEEEEC--------CCEECSEEECCTTCC----------------------HHHHHHHHHHH
T ss_pred CCCCcceEEEEEEE-CCEEEEEEEcC-----CCcEECCcCccCCCCC----------------------HHHHHHHHHHH
Confidence 44456778878875 88999999873 5899999999999998 47999999999
Q ss_pred hhCCCCCCCCCCeeEEeecccc---c--CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 202 EIGVPSESLCNPLFIGISRRRL---N--VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 202 EtGl~~~~~~~p~~l~~~~~~~---~--~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
|||+.+.... ++++..... . ......+++.|....+++. .+ .|..++.|++++++.++
T Consensus 116 EtGl~v~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~E~~~~~w~~~~el~~l 178 (205)
T 3q1p_A 116 ETGYEVDHFK---LLAIFDKEKHQPSPSATHVYKIFIGCEIIGGEKK------TS-IETEEVEFFGENELPNL 178 (205)
T ss_dssp HHSEEEEEEE---EEEEEEHHHHSCCCCSSCEEEEEEEEEEEEECCC------CC-TTSCCEEEECTTSCCCB
T ss_pred HHCCccccce---EEEEEeccccCCCCCCceEEEEEEEEEecCCccC------CC-CcceEEEEEeHHHhhhc
Confidence 9999887655 666643211 1 1233344556655544443 33 68999999999999876
No 49
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.63 E-value=3e-16 Score=136.00 Aligned_cols=107 Identities=13% Similarity=0.027 Sum_probs=70.2
Q ss_pred CeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCCCCCCeeEE
Q 022346 138 KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPLFIG 217 (298)
Q Consensus 138 g~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~~~~p~~l~ 217 (298)
++|||++|.+.. ..++.|+||||++|++|+ +.+||+||++||||+.+.... +++
T Consensus 77 ~~vlLv~q~R~~-~~~~~welPgG~ve~gEs----------------------~~~aA~REl~EEtGl~~~~~~---~l~ 130 (212)
T 2dsc_A 77 ECIVLVKQFRPP-MGGYCIEFPAGLIDDGET----------------------PEAAALRELEEETGYKGDIAE---CSP 130 (212)
T ss_dssp CEEEEEEEEEGG-GTEEEEECCEEECCTTCC----------------------HHHHHHHHHHHHHCCCCEEEE---ECC
T ss_pred cEEEEEEeecCC-CCCcEEECCccccCCCCC----------------------HHHHHHHHHHHHhCCCccceE---Eec
Confidence 489999875542 346799999999999998 479999999999999876544 333
Q ss_pred eecc--cccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhc
Q 022346 218 ISRR--RLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMAS 271 (298)
Q Consensus 218 ~~~~--~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~ 271 (298)
.... .+......+|++.+........ .-....+..|..++.|++++++.++..
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 131 AVCMDPGLSNCTIHIVTVTINGDDAENA-RPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp CEESCTTTBCCEEEEEEEEEETTSGGGS-SCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred cEEcCCCccCceEEEEEEEEeCcccccc-CCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 3211 1122233344444433221100 000125677999999999999998764
No 50
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.63 E-value=2.7e-16 Score=135.74 Aligned_cols=109 Identities=26% Similarity=0.382 Sum_probs=79.4
Q ss_pred cccCCcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhh
Q 022346 122 HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (298)
Q Consensus 122 ~~~~~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (298)
|....++|.++|++ +|+|||+||+ +|.|.||||++|++|+ +.+||+||++|
T Consensus 66 y~~~~~~v~~vv~~-~~~vLLvrr~------~g~w~lPgG~ve~gEs----------------------~~~aa~REl~E 116 (206)
T 3o8s_A 66 YQTPKLDTRAAIFQ-EDKILLVQEN------DGLWSLPGGWCDVDQS----------------------VKDNVVKEVKE 116 (206)
T ss_dssp --CCEEEEEEEEEE-TTEEEEEECT------TSCEECSEEECCTTSC----------------------HHHHHHHHHHH
T ss_pred CCCCCccEEEEEEE-CCEEEEEEec------CCeEECCeeccCCCCC----------------------HHHHHHHHHHH
Confidence 44456778777774 6899999987 4899999999999998 47999999999
Q ss_pred hhCCCCCCCCCCeeEEeecc---ccc--CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 202 EIGVPSESLCNPLFIGISRR---RLN--VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 202 EtGl~~~~~~~p~~l~~~~~---~~~--~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
|||+.+.... ++++... ... ......+++.|....+++. .+ .|..++.|++++++.++
T Consensus 117 EtGl~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~E~~~~~w~~~~el~~l 179 (206)
T 3o8s_A 117 EAGLDVEAQR---VVAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQ------PN-SETVASGFFSLDDLPPL 179 (206)
T ss_dssp HHCEEEEEEE---EEEEEEHHHHCC-----CEEEEEEEEEEEEECCC------CC-SSCSEEEEECTTSCCCB
T ss_pred HHCCcceeee---EEEEEeccccCCCCCCceEEEEEEEEEecCCeec------CC-CCceEEEEEeHHHhhhc
Confidence 9999887665 6666532 111 1223344566655554433 33 68999999999999976
No 51
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.62 E-value=1.6e-16 Score=139.33 Aligned_cols=112 Identities=17% Similarity=0.196 Sum_probs=78.3
Q ss_pred CCcccEEEEE---eCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhh
Q 022346 125 SPLGNGAVVE---TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (298)
Q Consensus 125 ~~~gV~~vl~---~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (298)
..++|+++|+ +.+++|||++|... .++|.|.+|||++|++|+ +.+||+||++|
T Consensus 12 p~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lPGG~ve~gEs----------------------~~~Aa~REl~E 67 (226)
T 2fb1_A 12 FYLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLMGGFVQKDES----------------------VDDAAKRVLAE 67 (226)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECEEEECCTTSC----------------------HHHHHHHHHHH
T ss_pred CeEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECCeeccCCCCC----------------------HHHHHHHHHHH
Confidence 3577877777 45679999999875 568999999999999998 57999999999
Q ss_pred hhCCCCCCCCCCeeEEeecccc--cCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 202 EIGVPSESLCNPLFIGISRRRL--NVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 202 EtGl~~~~~~~p~~l~~~~~~~--~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
|||+.+..+. .++...... .......+++.+....+... .+..|..++.|++++++.++
T Consensus 68 EtGl~~~~~~---~l~~~~~~~r~~~~~~v~~~y~a~~~~~~~~------~~~~e~~~~~W~~~~el~~l 128 (226)
T 2fb1_A 68 LTGLENVYME---QVGAFGAIDRDPGERVVSIAYYALININEYD------RELVQKHNAYWVNINELPAL 128 (226)
T ss_dssp HHCCCSCEEE---EEEEECCTTSSSSSCEEEEEEEEECCTTSSC------HHHHHHTTEEEEETTSCCCB
T ss_pred HHCCCCCceE---EEEEeCCCCcCCCceEEEEEEEEEecCcccc------cCCccccceEEEEHHHhhhc
Confidence 9999987665 566554322 11222222223323332221 12357889999999998754
No 52
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.62 E-value=3.1e-16 Score=127.03 Aligned_cols=106 Identities=21% Similarity=0.311 Sum_probs=72.9
Q ss_pred CcccEEEEEeC-CCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 126 PLGNGAVVETS-DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 126 ~~gV~~vl~~~-dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
..++++++++. +|+|||+||. +|.|.||||++|+||+ +.+||+||+.||||
T Consensus 18 ~~~~~~vi~~~~~~~vLl~~r~------~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEtG 69 (148)
T 2azw_A 18 RYAAYIIVSKPENNTMVLVQAP------NGAYFLPGGEIEGTET----------------------KEEAIHREVLEELG 69 (148)
T ss_dssp CCEEEEECEEGGGTEEEEEECT------TSCEECSEEECCTTCC----------------------HHHHHHHHHHHHHS
T ss_pred eeEEEEEEECCCCCeEEEEEcC------CCCEeCCCcccCCCCC----------------------HHHHHHHHHHHHhC
Confidence 55676777765 6999999973 2899999999999998 47999999999999
Q ss_pred CCCCCCCCCeeEEeecc-cc--cC---CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 205 VPSESLCNPLFIGISRR-RL--NV---RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~~-~~--~~---~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
+.+.... +++.... .+ .. .....++|.+....+.. ....|..++.|++++++.++
T Consensus 70 l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~e~~~~~W~~~~el~~~ 130 (148)
T 2azw_A 70 ISVEIGC---YLGEADEYFYSNHRQTAYYNPGYFYVANTWRQLS-------EPLERTNTLHWVAPEEAVRL 130 (148)
T ss_dssp EEEEEEE---EEEEEEEEEEETTTTEEEEEEEEEEEEEEEEECS-------SCC-CCSEEEEECHHHHHHH
T ss_pred CeeEeee---EEEEEEEEEcCCCCCcceEEEEEEEEEEcCcCCc-------CCCCceeeEEEeeHHHHHhh
Confidence 9986654 5554321 11 11 11223344443332221 22357789999999999976
No 53
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.62 E-value=4.8e-16 Score=132.26 Aligned_cols=106 Identities=19% Similarity=0.299 Sum_probs=75.8
Q ss_pred CCcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 125 ~~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
..++|++++.+ +|+|||+||.... .+|.|.||||++|++|+ +.+||+||++||||
T Consensus 39 ~~~~v~~ii~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 93 (189)
T 3cng_A 39 PKVIVGCIPEW-ENKVLLCKRAIAP--YRGKWTLPAGFMENNET----------------------LVQGAARETLEEAN 93 (189)
T ss_dssp CEEEEEEEEEE-TTEEEEEEESSSS--STTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred CceEEEEEEEe-CCEEEEEEccCCC--CCCeEECceeeccCCCC----------------------HHHHHHHHHHHHHC
Confidence 34566666665 8999999998763 47999999999999998 57999999999999
Q ss_pred CCCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHh
Q 022346 205 VPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELE 267 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~ 267 (298)
+.+.... ++++... .......++|.+....+++. ...|..++.|++++++.
T Consensus 94 l~~~~~~---~~~~~~~--~~~~~~~~~f~~~~~~~~~~-------~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 94 ARVEIRE---LYAVYSL--PHISQVYMLFRAKLLDLDFF-------PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp CCEEEEE---EEEEEEE--GGGTEEEEEEEEEECCSCCC-------CCTTEEEEEEECTTTCC
T ss_pred Cccccce---eEEEEec--CCCcEEEEEEEEEeCCCccC-------CCccceeEEEECHHHcC
Confidence 9876543 5555322 22233333444443333322 24588999999999997
No 54
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.61 E-value=1.1e-15 Score=133.42 Aligned_cols=126 Identities=8% Similarity=-0.009 Sum_probs=77.1
Q ss_pred CCcccEEEEEe-CCCeEEEEEecCCCC------------------------------CCCCcEEcCCcccCC-CCCCCCC
Q 022346 125 SPLGNGAVVET-SDKKILLLQRSNNVG------------------------------EFPGHFVFPGGHPEP-QDAGITS 172 (298)
Q Consensus 125 ~~~gV~~vl~~-~dg~vLl~rRs~~~~------------------------------~~~g~w~~PGG~vE~-~E~~~~~ 172 (298)
.+-+|++++++ .++++||+|+.+... ..++.|+||||++|+ ||+
T Consensus 35 ~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs---- 110 (218)
T 3q91_A 35 THDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLS---- 110 (218)
T ss_dssp CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCC----
T ss_pred cCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCC----
Confidence 36677888877 468999999765320 116899999999999 998
Q ss_pred CCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCC--CCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCC
Q 022346 173 HPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS--ESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQ 250 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~--~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~ 250 (298)
+.+||+||++||||+.+ ..+. .++.............++|.+..........-....
T Consensus 111 ------------------~~eaA~REl~EEtGl~~~~~~l~---~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~ 169 (218)
T 3q91_A 111 ------------------LEEVACKEAWEECGYHLAPSDLR---RVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLV 169 (218)
T ss_dssp ------------------HHHHHHHHHHHHHCBCCCGGGCE---EEEEEEEC---CCEEEEEEEEEECGGGBCC------
T ss_pred ------------------HHHHHHHHHHHHhCCccccCceE---EEEEEecCCCccceEEEEEEEEECCcccccCCCCCC
Confidence 47999999999999998 5554 555432211111112222333222211000000115
Q ss_pred CCCcccceEEEcHHHHhchhccCCC
Q 022346 251 DGYESTQLFAVSMIELENMASKMPG 275 (298)
Q Consensus 251 d~~E~~~~~wv~~~el~~l~~~~~~ 275 (298)
+..|..++.|++++++.++......
T Consensus 170 d~~E~~ev~wv~l~el~~~i~~g~i 194 (218)
T 3q91_A 170 EEGELIEVVHLPLEGAQAFADDPDI 194 (218)
T ss_dssp ---CCEEEEEEEGGGHHHHHHCTTS
T ss_pred CCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 6679999999999999998854443
No 55
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.61 E-value=1.8e-16 Score=137.26 Aligned_cols=117 Identities=21% Similarity=0.295 Sum_probs=73.4
Q ss_pred EEEeCCCeEEEEEecCCCCC--CCCcEEc-CCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCC
Q 022346 132 VVETSDKKILLLQRSNNVGE--FPGHFVF-PGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSE 208 (298)
Q Consensus 132 vl~~~dg~vLl~rRs~~~~~--~~g~w~~-PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~ 208 (298)
+++..+|+|||++|....+. .+|.|.+ ||||+|+||+.. -...+.+||+||++|||||.+.
T Consensus 73 ~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~----------------p~EtleeAa~REl~EEtGl~v~ 136 (211)
T 3e57_A 73 VVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGAT----------------PREAFLKGLEREVNEEVDVSLR 136 (211)
T ss_dssp EEEEETTEEEEEEC------------CBSSEECCCBGGGCSS----------------HHHHHHHHHHHHHHHHEEEEEE
T ss_pred EEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCC----------------chhhHHHHHHHHHHHHhCCeee
Confidence 34456899999999876432 5689998 999999999710 0011579999999999999876
Q ss_pred CCCCCeeEEeeccccc--CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCC
Q 022346 209 SLCNPLFIGISRRRLN--VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPG 275 (298)
Q Consensus 209 ~~~~p~~l~~~~~~~~--~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~ 275 (298)
.+. ++++..+... +.....++|.|....+++ ...|..++.|+++++|.++...++.
T Consensus 137 ~~~---~ig~~~~~~~~~~~~~l~~~f~~~~~~g~~--------~~~E~~~~~W~~~~eL~~~~~~le~ 194 (211)
T 3e57_A 137 ELE---FLGLINSSTTEVSRVHLGALFLGRGKFFSV--------KEKDLFEWELIKLEELEKFSGVMEG 194 (211)
T ss_dssp EEE---EEEEEECCSSHHHHTEEEEEEEEEEEEEEE--------SCTTTCEEEEEEHHHHHHHGGGCCH
T ss_pred ccE---EEEEEeccCCCCCeEEEEEEEEEEeCCcee--------CCCCeEEEEEEEHHHHHHhHhhccc
Confidence 655 7887654221 111122234454433332 2447789999999999998766653
No 56
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.60 E-value=1.2e-15 Score=137.21 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=76.0
Q ss_pred EEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCCC
Q 022346 131 AVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESL 210 (298)
Q Consensus 131 ~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~~ 210 (298)
+++++.+++|||+||.... +|+|.+|||++|+||+ +++||+||++||||+.+..+
T Consensus 144 iv~v~~~~~vLL~rr~~~~---~g~w~lPgG~vE~GEt----------------------~eeAa~REv~EEtGl~v~~~ 198 (269)
T 1vk6_A 144 IVAIRRDDSILLAQHTRHR---NGVHTVLAGFVEVGET----------------------LEQAVAREVMEESGIKVKNL 198 (269)
T ss_dssp EEEEEETTEEEEEEETTTC---SSCCBCEEEECCTTCC----------------------HHHHHHHHHHHHHCCEEEEE
T ss_pred EEEEEeCCEEEEEEecCCC---CCcEECCcCcCCCCCC----------------------HHHHHHHHHHHHhCceeeeE
Confidence 3445578999999998753 6999999999999998 57999999999999998766
Q ss_pred CCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 211 CNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 211 ~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
. +++...+.+... ..++|.+....+++. .+..|..++.|++++++..+
T Consensus 199 ~---~~~~~~~~~~~~--~~~~f~a~~~~~~~~------~~~~E~~~~~W~~~~el~~l 246 (269)
T 1vk6_A 199 R---YVTSQPWPFPQS--LMTAFMAEYDSGDIV------IDPKELLEANWYRYDDLPLL 246 (269)
T ss_dssp E---EEEEEEEETTEE--EEEEEEEEEEECCCC------CCTTTEEEEEEEETTSCCSC
T ss_pred E---EEEEEecCCCCE--EEEEEEEEECCCCcC------CCCcceEEEEEEEHHHhhhc
Confidence 5 676654333222 222333433334443 55679999999999999864
No 57
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.59 E-value=1.5e-15 Score=124.85 Aligned_cols=57 Identities=28% Similarity=0.593 Sum_probs=48.5
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCC
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (298)
+.+++++++ +|+|||+||.. +|.|.||||++|+||+ +.+||+||++||||+.
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl~ 53 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYPGGHVEHNET----------------------PIEAVKREFEEETGIV 53 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECSEEECCTTCC----------------------HHHHHHHHHHHHHSEE
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECCeeecCCCCC----------------------HHHHHHHHHHHHHCCc
Confidence 356677776 89999999864 4899999999999998 5799999999999998
Q ss_pred CCCCC
Q 022346 207 SESLC 211 (298)
Q Consensus 207 ~~~~~ 211 (298)
+....
T Consensus 54 ~~~~~ 58 (156)
T 1k2e_A 54 VEPIG 58 (156)
T ss_dssp EEECC
T ss_pred ceecc
Confidence 76554
No 58
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.59 E-value=1.7e-15 Score=128.93 Aligned_cols=103 Identities=22% Similarity=0.327 Sum_probs=72.4
Q ss_pred cEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCC
Q 022346 129 NGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSE 208 (298)
Q Consensus 129 V~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~ 208 (298)
+++++. .+|+|||+||.. +|.|.||||++|+||+ +.+||+||++||||+.+.
T Consensus 7 ~~~vi~-~~~~vLL~~r~~-----~g~W~lPGG~ve~gEs----------------------~~~aa~REl~EEtGl~~~ 58 (188)
T 3fk9_A 7 TNCIVV-DHDQVLLLQKPR-----RGWWVAPGGKMEAGES----------------------ILETVKREYWEETGITVK 58 (188)
T ss_dssp EEEEEE-ETTEEEEEECTT-----TCCEECCEEECCTTCC----------------------HHHHHHHHHHHHHSCEES
T ss_pred EEEEEE-ECCEEEEEEeCC-----CCeEECCeecccCCCC----------------------HHHHHHHHHHHHHCCCCC
Confidence 344454 589999999853 5899999999999998 579999999999999988
Q ss_pred CCCCCeeEEeecccccC-C-ce---EEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 209 SLCNPLFIGISRRRLNV-R-PA---AFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 209 ~~~~p~~l~~~~~~~~~-~-~~---~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
... ++++....... . .. ..++|.+....+++. ...|..++.|++++++.++
T Consensus 59 ~~~---~~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~~-------~~~e~~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 59 NPE---LKGIFSMVIFDEGKIVSEWMLFTFKATEHEGEML-------KQSPEGKLEWKKKDEVLEL 114 (188)
T ss_dssp SCE---EEEEEEEEEEETTEEEEEEEEEEEEESCEESCCC-------SEETTEEEEEEEGGGGGGS
T ss_pred Cce---EEEEEEEEecCCCcceEEEEEEEEEEECCCCCCc-------CCCCCEeEEEEEHHHhhhC
Confidence 765 66665433221 1 11 334455544443332 2234468999999999865
No 59
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.59 E-value=6e-16 Score=132.53 Aligned_cols=109 Identities=17% Similarity=0.270 Sum_probs=71.1
Q ss_pred cccEEEEE--eCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhC
Q 022346 127 LGNGAVVE--TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (298)
Q Consensus 127 ~gV~~vl~--~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (298)
..++++++ +.+++|||+||+.. +|.|+||||++|+||+ +.+||+||++||||
T Consensus 41 ~~~~~vi~~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEt----------------------~~eaa~REl~EEtG 94 (194)
T 2fvv_A 41 KRAACLCFRSESEEEVLLVSSSRH----PDRWIVPGGGMEPEEE----------------------PSVAAVREVCEEAG 94 (194)
T ss_dssp EEEEEEEESSTTCCEEEEEECSSC----TTSEECSEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred ccEEEEEEEECCCCEEEEEEEeCC----CCcEECCCCcCCCCcC----------------------HHHHHHHHHHHHhC
Confidence 44555555 44689999998754 5899999999999998 47999999999999
Q ss_pred CCCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchh
Q 022346 205 VPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMA 270 (298)
Q Consensus 205 l~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~ 270 (298)
+.+.... +++............+|++.+ . +.+.. . ..+..|..++.|++++++.++.
T Consensus 95 l~~~~~~---~l~~~~~~~~~~~~~~f~~~~--~-~~~~~-~--~~~~e~~~~~~W~~~~el~~~l 151 (194)
T 2fvv_A 95 VKGTLGR---LVGIFENQERKHRTYVYVLIV--T-EVLED-W--EDSVNIGRKREWFKIEDAIKVL 151 (194)
T ss_dssp EEEEEEE---EEEEEEETTTTEEEEEEEEEE--E-EECSS-C--HHHHHHCCCEEEEEHHHHHHHH
T ss_pred Cccccce---EEEEEEcCCCceEEEEEEEEE--c-cccCC-C--CCcccccceEEEEEHHHHHHHH
Confidence 9877655 666654322122222232221 1 11100 0 0011134689999999999865
No 60
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.59 E-value=3.7e-15 Score=123.97 Aligned_cols=112 Identities=17% Similarity=0.188 Sum_probs=75.0
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
..+|++++++.+|+|||++|+. +|.|.||||++|+||+ +.+||+||+.||||+
T Consensus 8 ~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p~G~~e~gE~----------------------~~~aa~RE~~EE~G~ 60 (164)
T 2kdv_A 8 RPNVGIVICNRQGQVMWARRFG-----QHSWQFPQGGINPGES----------------------AEQAMYRELFEEVGL 60 (164)
T ss_dssp EEEEEEEEECTTSEEEEEEETT-----CCCEECCEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred CcEEEEEEEccCCEEEEEEEcC-----CCeEECCeeecCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 3457778888899999999874 5899999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecc----cccC-----------CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhc
Q 022346 206 PSESLCNPLFIGISRR----RLNV-----------RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELEN 268 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~----~~~~-----------~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~ 268 (298)
.+..+. +++...+ .... .....++|.+....++..-. ....+..|+.++.|++++++.+
T Consensus 61 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-l~~~~~~E~~~~~W~~~~e~~~ 134 (164)
T 2kdv_A 61 SRKDVR---ILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEIN-MQTSSTPEFDGWRWVSYWYPVR 134 (164)
T ss_dssp CGGGEE---EEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCC-SCSSSSCSEEEEEEEETTTGGG
T ss_pred CccceE---EEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccc-cCCCCCchhceEEEecHHHhhh
Confidence 987655 5665321 1111 01122344443333221100 0001245899999999988765
No 61
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.58 E-value=6.8e-16 Score=126.31 Aligned_cols=107 Identities=19% Similarity=0.247 Sum_probs=73.2
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.++++++++ .+|+|||+|| +|.|.||||++|+||+ +.+||+||++||||+
T Consensus 19 ~~~~~~ii~-~~~~vLl~~r-------~~~w~lPgG~ve~gE~----------------------~~~aa~REl~EEtGl 68 (154)
T 2pqv_A 19 GVRATALIV-QNHKLLVTKD-------KGKYYTIGGAIQVNES----------------------TEDAVVREVKEELGV 68 (154)
T ss_dssp EEEEEECCE-ETTEEEEEEE-------TTEEECEEEECBTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred eEEEEEEEE-ECCEEEEEec-------CCeEECcccCcCCCCC----------------------HHHHHHHHHHHHhCC
Confidence 345666666 5889999999 4899999999999998 479999999999999
Q ss_pred CCCCCCCCeeEEeeccccc--CC--ceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 206 PSESLCNPLFIGISRRRLN--VR--PAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~--~~--~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
.+.... ++++..+.+. +. ....++|.+....+.... ..+..|..++.|++++++.++
T Consensus 69 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 69 KAQAGQ---LAFVVENRFEVDGVSYHNIEFHYLVDLLEDAPLT----MQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp CEEEEE---EEEEEEEEEEETTEEEEEEEEEEEEEESSCCCSE----EEETTEEEEEEEEEGGGGGGS
T ss_pred eeeece---EEEEEeeeecCCCCcceEEEEEEEEEecCCCCcc----cCCCCceeeEEEeEHHHHhhc
Confidence 887554 5555432221 21 112234444433322110 023457889999999999976
No 62
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.57 E-value=3.4e-15 Score=124.30 Aligned_cols=95 Identities=17% Similarity=0.237 Sum_probs=65.1
Q ss_pred CcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC
Q 022346 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (298)
Q Consensus 126 ~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (298)
.+.++++++..+|++||++|+ +|.|.||||++|+||+ +.+||+||++||||+
T Consensus 15 ~~~~~~~ii~~~~~vLL~~r~------~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 66 (163)
T 3f13_A 15 LARRATAIIEMPDGVLVTASR------GGRYNLPGGKANRGEL----------------------RSQALIREIREETGL 66 (163)
T ss_dssp CEEEEEEECEETTEEEEEECC---------BBCSEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEEeCCEEEEEEEC------CCeEECCceeCCCCCC----------------------HHHHHHHHHHHHHCc
Confidence 444555666688999999985 4899999999999998 579999999999999
Q ss_pred CCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcH
Q 022346 206 PSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSM 263 (298)
Q Consensus 206 ~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~ 263 (298)
.+..+. +++.... .. ...++|.+.. .+++. .+ .|+.++.|++.
T Consensus 67 ~~~~~~---~l~~~~~--~~--~~~~~f~~~~-~~~~~------~~-~E~~~~~W~~~ 109 (163)
T 3f13_A 67 RINSML---YLFDHIT--PF--NAHKVYLCIA-QGQPK------PQ-NEIERIALVSS 109 (163)
T ss_dssp CCCEEE---EEEEEEC--SS--EEEEEEEEEC--CCCC------CC-TTCCEEEEESS
T ss_pred ccceeE---EEEEEec--CC--eEEEEEEEEE-CCcCc------cC-CCceEEEEECc
Confidence 987665 5554322 12 2233344433 33332 33 38899999993
No 63
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.57 E-value=4.2e-15 Score=137.09 Aligned_cols=124 Identities=15% Similarity=0.194 Sum_probs=77.2
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCC
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (298)
++|++++. .+|+|||+||+.. ..+|.|.||||++|+||+ +.+||+||++||||+.
T Consensus 204 ~~v~~vi~-~~~~vLL~~r~~~--~~~g~w~lPgG~ve~gE~----------------------~~~aa~REl~EEtGl~ 258 (341)
T 2qjo_A 204 ITTDAVVV-QAGHVLMVRRQAK--PGLGLIALPGGFIKQNET----------------------LVEGMLRELKEETRLK 258 (341)
T ss_dssp EEEEEEEE-ETTEEEEEECCSS--SSTTCEECSEEECCTTSC----------------------HHHHHHHHHHHHHCCS
T ss_pred eEEEEEEE-eCCEEEEEEecCC--CCCCeEECCCCcCCCCCC----------------------HHHHHHHHHhhhhCCc
Confidence 56666666 6899999999865 458999999999999998 5799999999999999
Q ss_pred CCCCCCCeeE------Eeeccccc--CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhccCCCCch
Q 022346 207 SESLCNPLFI------GISRRRLN--VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASKMPGCHQ 278 (298)
Q Consensus 207 ~~~~~~p~~l------~~~~~~~~--~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~~~~~~~ 278 (298)
+.... ++ ........ ......++|.+....++.. ...+..|..++.|++++++.++...+++.++
T Consensus 259 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~----~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~ 331 (341)
T 2qjo_A 259 VPLPV---LRGSIVDSHVFDAPGRSLRGRTITHAYFIQLPGGELP----AVKGGDDAQKAWWMSLADLYAQEEQIYEDHF 331 (341)
T ss_dssp SCHHH---HHHTEEEEEEECCTTSCTTSCEEEEEEEEECCSSSCC----CCC------CEEEEEHHHHHHTGGGBCTTHH
T ss_pred ccccc---ccccccceEEEeCCCCCCCCcEEEEEEEEEecCCCcC----ccCCCCceeeEEEeeHHHHhhhhhhhchHHH
Confidence 87543 22 12111110 1112222223333333211 0134568899999999999987655666655
Q ss_pred hHHH
Q 022346 279 GGFA 282 (298)
Q Consensus 279 g~~~ 282 (298)
-.+.
T Consensus 332 ~il~ 335 (341)
T 2qjo_A 332 QIIQ 335 (341)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3433
No 64
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.56 E-value=5e-15 Score=133.27 Aligned_cols=113 Identities=17% Similarity=0.213 Sum_probs=71.0
Q ss_pred CCcccEEEEEeC-CCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhh
Q 022346 125 SPLGNGAVVETS-DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (298)
Q Consensus 125 ~~~gV~~vl~~~-dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (298)
...++++++++. +|+|||+||... +|.|.||||++|+||+ +.+||+||++|||
T Consensus 100 ~v~~v~avv~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEs----------------------~~eAA~REl~EEt 153 (271)
T 2a6t_A 100 RIPVRGAIMLDMSMQQCVLVKGWKA----SSGWGFPKGKIDKDES----------------------DVDCAIREVYEET 153 (271)
T ss_dssp CCCEEEEEEBCSSSSEEEEEEESST----TCCCBCSEEECCTTCC----------------------HHHHHHHHHHHHH
T ss_pred CCCeEEEEEEECCCCEEEEEEEeCC----CCeEECCcccCCCCcC----------------------HHHHHHHHHHHHh
Confidence 344457777765 489999999764 5899999999999999 5799999999999
Q ss_pred CCCCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchh
Q 022346 204 GVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMA 270 (298)
Q Consensus 204 Gl~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~ 270 (298)
|+.+..+....... ..........+|++.+........ ..+..|+.++.|++++++.++.
T Consensus 154 Gl~~~~l~~~~~~~--~~~~~~~~~~~f~~~~~~~~~~~~-----~~~~~E~~~~~W~~~~el~~~~ 213 (271)
T 2a6t_A 154 GFDCSSRINPNEFI--DMTIRGQNVRLYIIPGISLDTRFE-----SRTRKEISKIEWHNLMDLPTFK 213 (271)
T ss_dssp CCCCTTTCCTTCEE--EEEETTEEEEEEEECCCCTTCCCC-----------EEEEEEEEGGGSTTCC
T ss_pred CCCceeeeeeeeec--cCCcCCceEEEEEEEEecCcccCC-----CCCccceeEEEEEEHHHHHHHH
Confidence 99987754211110 001112222233333211111111 1245689999999999998865
No 65
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.54 E-value=1.2e-14 Score=128.24 Aligned_cols=119 Identities=19% Similarity=0.281 Sum_probs=81.6
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEcC-CcccCCC------CCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhh
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFP-GGHPEPQ------DAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~P-GG~vE~~------E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (298)
.+|.+++++.+|+|||+||+.....+||+|++| |||+++| |++. .+.+||+||+
T Consensus 60 ~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~-------------------~~~~Aa~REl 120 (235)
T 2dho_A 60 RAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDAL-------------------GVRRAAQRRL 120 (235)
T ss_dssp EEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGH-------------------HHHHHHHHHH
T ss_pred EEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccch-------------------hHHHHHHHHH
Confidence 456777888899999999998776799999999 5999999 5520 0369999999
Q ss_pred hhhhCCCCCCCC--CCeeEEeeccccc---CCc--eEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhc
Q 022346 200 VEEIGVPSESLC--NPLFIGISRRRLN---VRP--AAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMAS 271 (298)
Q Consensus 200 ~EEtGl~~~~~~--~p~~l~~~~~~~~---~~~--~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~ 271 (298)
.|||||.+..+. ...+++...+... ... ...++|.+... .++. ++..|+.++.|++++++.++..
T Consensus 121 ~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~-~~~~------~~~~Ev~~~~wv~~~el~~~l~ 192 (235)
T 2dho_A 121 KAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMN-VTLN------PDPNEIKSYCYVSKEELKELLK 192 (235)
T ss_dssp HHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECC-CCCC------CCTTTEEEEEEECHHHHHHHHH
T ss_pred HHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEEC-CCCc------CChHHEEEEEEEcHHHHHHHHh
Confidence 999999875321 1235554332211 111 11223334322 2332 5677999999999999998764
No 66
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.53 E-value=1.5e-14 Score=128.31 Aligned_cols=119 Identities=21% Similarity=0.335 Sum_probs=81.6
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCC-cccCCC------CCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhh
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPG-GHPEPQ------DAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PG-G~vE~~------E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (298)
.++.+++++.+|+|||+||+.....+||+|++|+ ||+++| |++. .+.+||+||+
T Consensus 71 ~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~-------------------~~~eAA~REl 131 (246)
T 2pny_A 71 RAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAI-------------------GVRRAAQRRL 131 (246)
T ss_dssp EEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGH-------------------HHHHHHHHHH
T ss_pred EEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccch-------------------hHHHHHHHHH
Confidence 4567778888999999999988767999999995 999999 6530 0269999999
Q ss_pred hhhhCCCCCCCC--CCeeEEeecccc--cCC---ceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhc
Q 022346 200 VEEIGVPSESLC--NPLFIGISRRRL--NVR---PAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMAS 271 (298)
Q Consensus 200 ~EEtGl~~~~~~--~p~~l~~~~~~~--~~~---~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~ 271 (298)
.|||||.+..+. ...+++.+.+.. ... ....++|.+... .++. ++..|+.++.|++++++.++..
T Consensus 132 ~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~-~~~~------~~~~Ev~~~~wv~~eel~~~l~ 203 (246)
T 2pny_A 132 QAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKN-VTLN------PDPSETKSILYLSQEELWELLE 203 (246)
T ss_dssp HHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECC-CCCC------CCTTTEEEEEEECHHHHHHHHH
T ss_pred HHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEEC-CCCC------CChHHeeEEEEEeHHHHHHHHH
Confidence 999999876431 123555433221 111 112223333322 2333 5677999999999999998763
No 67
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.52 E-value=4.2e-14 Score=127.31 Aligned_cols=115 Identities=18% Similarity=0.175 Sum_probs=75.2
Q ss_pred cccCCcccEEEEEe-C----CCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHH
Q 022346 122 HTASPLGNGAVVET-S----DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSIT 196 (298)
Q Consensus 122 ~~~~~~gV~~vl~~-~----dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~ 196 (298)
|....++|.+|++. . +++|||++|... .++|.|.+|||++|++|+ +.+||+
T Consensus 35 ~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lPGG~ve~gEs----------------------~~~AA~ 90 (273)
T 2fml_A 35 YEKPSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALPGGFVNRNES----------------------TEDSVL 90 (273)
T ss_dssp CCCCEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECCEEECCTTSC----------------------HHHHHH
T ss_pred CCCCceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECCccCCCCCcC----------------------HHHHHH
Confidence 34445677766664 2 248999999876 567999999999999998 579999
Q ss_pred HhhhhhhCCCCCCCCCCeeEEeeccccc---CCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 197 REVVEEIGVPSESLCNPLFIGISRRRLN---VRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 197 REl~EEtGl~~~~~~~p~~l~~~~~~~~---~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
||+.||||+.+.... ...++.+..... .+....+ |.+....+. . ....|..++.|++++++.+.
T Consensus 91 REl~EEtGl~v~~~~-l~~l~~~~~~~r~~~~~~~~~~-y~a~~~~~~-~------~~~~E~~~~~W~~~~e~~~~ 157 (273)
T 2fml_A 91 RETKEETGVVISQEN-IEQLHSFSRPDRDPRGWVVTVS-YLAFIGEEP-L------IAGDDAKEVHWFNLERHGQH 157 (273)
T ss_dssp HHHHHHHCCCCCGGG-EEEEEEECCTTSSTTSSEEEEE-EEEECCCCC-C------CCCTTEEEEEEEEEEEETTE
T ss_pred HHHHHHHCCCCCcCc-EEEEEEEcCCCCCCCceEEEEE-EEEEeCCCC-C------CCCcceeeEEEEEhhHhhhh
Confidence 999999998765432 113443322211 1222222 333333222 1 34568899999999986543
No 68
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.52 E-value=4.3e-14 Score=131.03 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=79.1
Q ss_pred cccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCC
Q 022346 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (298)
Q Consensus 127 ~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (298)
++|+++++ .+|+|||+||... ..+|.|.||||++|+||+ +.+||+||++||||+.
T Consensus 209 ~~v~~vv~-~~~~vLL~~r~~~--~~~g~w~lPgG~ve~gEt----------------------~~~aa~REl~EEtGl~ 263 (352)
T 2qjt_B 209 VTVDALVI-VNDHILMVQRKAH--PGKDLWALPGGFLECDET----------------------IAQAIIRELFEETNIN 263 (352)
T ss_dssp EEEEEEEE-ETTEEEEEEESSS--SSTTCEECSEEECCTTSC----------------------HHHHHHHHHHHHHCCS
T ss_pred eEEEEEEE-ECCEEEEEEEcCC--CCCCeEECCCCcCCCCCC----------------------HHHHHHHHHHHhhCCC
Confidence 45666666 7899999999875 357999999999999998 5799999999999999
Q ss_pred CCCCCCC-eeEEeecccccCC------ceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcH-HHHhchhccCCCCch
Q 022346 207 SESLCNP-LFIGISRRRLNVR------PAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSM-IELENMASKMPGCHQ 278 (298)
Q Consensus 207 ~~~~~~p-~~l~~~~~~~~~~------~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~-~el~~l~~~~~~~~~ 278 (298)
+...... .+..........+ ....|++.+ ..++.. ....+..|..++.|+++ +++.++...+++.++
T Consensus 264 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~--~~~~~~---~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~ 338 (352)
T 2qjt_B 264 LTHEQLAIAKRCEKVFDYPDRSVRGRTISHVGLFVF--DQWPSL---PEINAADDAKDVKWISLGSNIKNICDRMLEDHY 338 (352)
T ss_dssp CCHHHHHHHEEEEEEECCTTSCTTSEEEEEEEEEEE--CSCSSC---CCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHH
T ss_pred cccchhcceeeeeEEecCCCCCCCccEEEEEEEEEE--eCCCCC---CccCCCccceEEEEecHHHHHHhhhhhhChhHH
Confidence 8743200 0111111111111 122333333 222200 00124568999999999 999987555665554
No 69
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.49 E-value=1.2e-14 Score=126.18 Aligned_cols=112 Identities=21% Similarity=0.347 Sum_probs=75.7
Q ss_pred cEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCC-CCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCC
Q 022346 129 NGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQD-AGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (298)
Q Consensus 129 V~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E-~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (298)
|.+++++.+++|||.|| ++|.|+||||++|+|| + +.+||+||++||||+.+
T Consensus 47 vv~~i~~~~~~vLl~~r------~~g~w~~PGG~ve~gE~t----------------------~~~aa~REl~EEtGl~~ 98 (212)
T 1u20_A 47 KLFDRVPIRRVLLMMMR------FDGRLGFPGGFVDTRDIS----------------------LEEGLKRELEEELGPAL 98 (212)
T ss_dssp EETTTEECCEEEEEEEE------TTSCEECSEEEECTTTSC----------------------HHHHHHHHHHHHHCGGG
T ss_pred EEEEEEecCCEEEEEEe------CCCeEECCCcccCCCCCC----------------------HHHHHHHHHHHHHCCCc
Confidence 33345567789999988 2689999999999999 8 47999999999999988
Q ss_pred CCCC--CCeeEEeecccccCCceEEEEEEecCChhhHHhhhc----cCCCCCcccceEEEcHHHHhch
Q 022346 208 ESLC--NPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYS----TAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 208 ~~~~--~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~----~~~d~~E~~~~~wv~~~el~~l 269 (298)
.... ...+++...+.+. .....++|.+....+++...-. ...+..|..++.|++++++.+.
T Consensus 99 ~~~~l~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 99 ATVEVTEDDYRSSQVREHP-QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp GGCCCCGGGEEEEEEECTT-SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred cccceeeeeEEEeccccCC-CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 7543 1113444333333 2334445566666655432111 1134568889999999999764
No 70
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.44 E-value=5.4e-13 Score=124.65 Aligned_cols=105 Identities=16% Similarity=0.209 Sum_probs=70.3
Q ss_pred eCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCCCCCCe
Q 022346 135 TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLCNPL 214 (298)
Q Consensus 135 ~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~~~~p~ 214 (298)
+.+.+|||++|... |.|.||||++|+||+ +.+||+||++|||||.+....
T Consensus 35 ~~~~~vLLv~r~~~-----g~W~lPgG~ve~gEs----------------------~~~AA~REl~EEtGl~~~~~~--- 84 (364)
T 3fjy_A 35 LDSIEVCIVHRPKY-----DDWSWPKGKLEQNET----------------------HRHAAVREIGEETGSPVKLGP--- 84 (364)
T ss_dssp HTTEEEEEEEETTT-----TEEECCEEECCTTCC----------------------HHHHHHHHHHHHHSCCEEEEE---
T ss_pred CCceEEEEEEcCCC-----CCEECCcCCCCCCCC----------------------HHHHHHHHHHHHhCCeeeecc---
Confidence 44568999999543 899999999999998 579999999999999886654
Q ss_pred eEEeeccccc--C-----------CceEEEEEEecCChhhHH----hhhcc--CCCCCcccceEEEcHHHHhch
Q 022346 215 FIGISRRRLN--V-----------RPAAFFFIKCSLQSNEIQ----QLYST--AQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 215 ~l~~~~~~~~--~-----------~~~~~~~~~~~~~~~ev~----~~~~~--~~d~~E~~~~~wv~~~el~~l 269 (298)
+++...+.+. + .....+||.+....++.. ..+.. ..+..|+.++.|++++++.++
T Consensus 85 ~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~ 158 (364)
T 3fjy_A 85 YLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKI 158 (364)
T ss_dssp EEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHH
T ss_pred ccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHH
Confidence 5665433222 1 122334444444444321 01111 145679999999999999976
No 71
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.43 E-value=4.4e-13 Score=121.81 Aligned_cols=120 Identities=13% Similarity=0.174 Sum_probs=82.8
Q ss_pred CcccEEEEEeCCC---eEEEEEecCCCCCCCCcEE-cCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhh
Q 022346 126 PLGNGAVVETSDK---KILLLQRSNNVGEFPGHFV-FPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (298)
Q Consensus 126 ~~gV~~vl~~~dg---~vLl~rRs~~~~~~~g~w~-~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (298)
..||-+.+++.++ ++++.||+..+..+||+|+ ++||++++||+ ..+||+||+.|
T Consensus 118 ~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs----------------------~~eaA~REl~E 175 (300)
T 3dup_A 118 AYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLS----------------------LRQNLIKECAE 175 (300)
T ss_dssp EEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSC----------------------HHHHHHHHHHH
T ss_pred EEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCC----------------------HHHHHHHHHHH
Confidence 3455555666777 9999999999989999995 89999999998 47999999999
Q ss_pred hhCCCCCCCCCCeeEEeeccc--cc-C-CceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhchhcc
Q 022346 202 EIGVPSESLCNPLFIGISRRR--LN-V-RPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENMASK 272 (298)
Q Consensus 202 EtGl~~~~~~~p~~l~~~~~~--~~-~-~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l~~~ 272 (298)
|+||+...+.....++..... .. + .+...|.|.+.+..+ +. ..+++.|+.++.|++++|+.++...
T Consensus 176 ElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~-~~----p~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 176 EADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPED-FR----PHNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp HHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEEECCTT-CC----CCCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred HhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEEEecCC-Cc----CCCCchHhheEEEECHHHHHHHHhc
Confidence 999987543322234432211 11 1 122233344434332 11 1156779999999999999987754
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.38 E-value=1.7e-12 Score=114.03 Aligned_cols=68 Identities=26% Similarity=0.483 Sum_probs=46.8
Q ss_pred eEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCC
Q 022346 139 KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSE 208 (298)
Q Consensus 139 ~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~ 208 (298)
+|||+||+.....++|.|+||||++|++|........+... .........+..||+||++|||||.+.
T Consensus 25 ~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~--~~~~~~~~a~~~aAiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 25 EVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPV--CAEDDDDPALAVTALRETAEEIGWLLA 92 (232)
T ss_dssp EEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCB--TCCSTTHHHHHHHHHHHHHHHHSCCCS
T ss_pred EEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhccccc--ccccchhhHHHHHHHHHHHHHhCceec
Confidence 89999999987778999999999999998620000000000 000112334789999999999999864
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.25 E-value=6e-12 Score=109.49 Aligned_cols=99 Identities=24% Similarity=0.342 Sum_probs=64.0
Q ss_pred eEEEEEecCCCCCCCCcEEcCCcccCCCC-CCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCCCC--CCCCee
Q 022346 139 KILLLQRSNNVGEFPGHFVFPGGHPEPQD-AGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSES--LCNPLF 215 (298)
Q Consensus 139 ~vLl~rRs~~~~~~~g~w~~PGG~vE~~E-~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~--~~~p~~ 215 (298)
++||+.|. +|.|+||||++|++| + +.+||+||++||||+.+.. +.....
T Consensus 66 ~~ll~~r~------~g~w~lPGG~ve~gE~t----------------------~~eaa~REl~EEtGl~~~~~~l~~l~~ 117 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFPGGFVDTQDRS----------------------LEDGLNRELREELGEAAAAFRVERTDY 117 (217)
T ss_dssp EEEEEEET------TSCEECSEEECCTTCSS----------------------HHHHHHHHHHHHHCGGGGGCCCCGGGE
T ss_pred cEEEEEcc------CCeEECCceecCCCCCC----------------------HHHHHHHHHHHHHCCCCccceeEEEEE
Confidence 56676664 489999999999999 8 4799999999999998873 321112
Q ss_pred EEeecccccCCceEEEEEEecCChhhHHhhhc----cCCCCCcccceEEEcHHHHh
Q 022346 216 IGISRRRLNVRPAAFFFIKCSLQSNEIQQLYS----TAQDGYESTQLFAVSMIELE 267 (298)
Q Consensus 216 l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~----~~~d~~E~~~~~wv~~~el~ 267 (298)
+..... . ......++|.+.+..+++...-. ...+..|..++.|++++++.
T Consensus 118 ~~~~~~-~-~~~~~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 118 RSSHVG-S-GPRVVAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp EEEEEC-S-SSSEEEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred EeecCC-C-CCeEEEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 222111 1 11233344566666655421100 11345688999999999887
No 74
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.09 E-value=1.8e-10 Score=96.91 Aligned_cols=97 Identities=15% Similarity=0.229 Sum_probs=66.2
Q ss_pred eEEEEEecCCCCCCCCcEEcCCcccCCCC-CCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCC-CCCCCCCCeeE
Q 022346 139 KILLLQRSNNVGEFPGHFVFPGGHPEPQD-AGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV-PSESLCNPLFI 216 (298)
Q Consensus 139 ~vLl~rRs~~~~~~~g~w~~PGG~vE~~E-~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl-~~~~~~~p~~l 216 (298)
.|||+.|. .|+|+||||++|++| + +++++.||+.||+|+ .+.... ++
T Consensus 45 ~iLmQ~R~------~G~weFPGGkVe~gE~t----------------------~e~aL~REl~EElg~~~V~~~~---y~ 93 (214)
T 3kvh_A 45 SVLMQMRF------DGLLGFPGGFVDRRFWS----------------------LEDGLNRVLGLGLGCLRLTEAD---YL 93 (214)
T ss_dssp EEEEEEET------TSCEECSEEEECTTTCC----------------------HHHHHHHSCCSCC---CCCGGG---EE
T ss_pred eEEEeeee------CCEEeCCCccCCCCCCC----------------------HHHHHHHHHHHhhCCeeeeeee---eE
Confidence 35555554 389999999999999 6 579999999999997 455444 55
Q ss_pred EeecccccCCceEEEEEEecCChhhHHhhhcc---CC-CCCcccceEEEcHHHHh
Q 022346 217 GISRRRLNVRPAAFFFIKCSLQSNEIQQLYST---AQ-DGYESTQLFAVSMIELE 267 (298)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~---~~-d~~E~~~~~wv~~~el~ 267 (298)
....+.++ +.+..++|.|..+.+++...... +. -..|+..+.-||+=.+.
T Consensus 94 ~s~~~~yp-~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~ 147 (214)
T 3kvh_A 94 SSHLTEGP-HRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQK 147 (214)
T ss_dssp EEEEC-----CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCT
T ss_pred EEEeccCC-CEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEec
Confidence 55444444 45667788899999988755543 22 25588899999875444
No 75
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.09 E-value=1.7e-10 Score=104.62 Aligned_cols=42 Identities=24% Similarity=0.482 Sum_probs=37.7
Q ss_pred eEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhhCCCC
Q 022346 139 KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (298)
Q Consensus 139 ~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (298)
+|||++|... |.|.+|||++|+||+ +.+||+||++||||+.+
T Consensus 140 ~vLl~~r~~~-----g~W~lPGG~Ve~GEs----------------------~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 140 QFVAIKRKDC-----GEWAIPGGMVDPGEK----------------------ISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEECTTT-----CSEECCCEECCTTCC----------------------HHHHHHHHHHHHHSCGG
T ss_pred EEEEEEecCC-----CcEeCCCcccCCCCC----------------------HHHHHHHHHHHHhCCcc
Confidence 6999998753 899999999999999 57999999999999973
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.90 E-value=1.3e-09 Score=99.95 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=67.4
Q ss_pred CCcccEEEEEeCCCeEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhhhh-
Q 022346 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI- 203 (298)
Q Consensus 125 ~~~gV~~vl~~~dg~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt- 203 (298)
..+.|++++. .+|+|||+ . . .| |.+|||.++.++. ++|+||++|||
T Consensus 182 p~~~vgaii~-~~g~vLL~--~-~----~G-W~LPG~~~~~~~~------------------------~~a~RE~~EEtt 228 (321)
T 3rh7_A 182 GEIRLGAVLE-QQGAVFLA--G-N----ET-LSLPNCTVEGGDP------------------------ARTLAAYLEQLT 228 (321)
T ss_dssp SCEEEEEEEE-SSSCEEEB--C-S----SE-EBCCEEEESSSCH------------------------HHHHHHHHHHHH
T ss_pred CcceEEEEEE-ECCEEEEe--e-C----CC-ccCCcccCCCChh------------------------HHHHHHHHHHhc
Confidence 4666777665 78999999 2 1 47 9999997766664 69999999997
Q ss_pred CCCCCCCCCCeeEEeecccccCCceEEEEEEecCChhhHHhhhccCCCCCcccceEEEcHHHHhch
Q 022346 204 GVPSESLCNPLFIGISRRRLNVRPAAFFFIKCSLQSNEIQQLYSTAQDGYESTQLFAVSMIELENM 269 (298)
Q Consensus 204 Gl~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~ev~~~~~~~~d~~E~~~~~wv~~~el~~l 269 (298)
|+.+.... +++++...... ...++|.|....+ +..++.|+++++|+.+
T Consensus 229 Gl~v~~~~---L~~v~~~~~~~--~~~i~f~~~~~~g-------------~~~e~~~f~~~elp~~ 276 (321)
T 3rh7_A 229 GLNVTIGF---LYSVYEDKSDG--RQNIVYHALASDG-------------APRQGRFLRPAELAAA 276 (321)
T ss_dssp SSCEEEEE---EEEEEECTTTC--CEEEEEEEEECSS-------------CCSSSEEECHHHHTTC
T ss_pred CCEEeece---EEEEEEcCCCc--eEEEEEEEEeCCC-------------CeeeeEEECHHHCCCc
Confidence 99998665 88886543322 2234556644332 2367999999999976
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.46 E-value=8.4e-08 Score=81.54 Aligned_cols=53 Identities=25% Similarity=0.419 Sum_probs=42.2
Q ss_pred CCcccEEEEE-eCCC--eEEEEEecCCCCCCCCcEEcCCcccCCCCCCCCCCCCCCCchhhhhhhhhhhHHHHHHHhhhh
Q 022346 125 SPLGNGAVVE-TSDK--KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (298)
Q Consensus 125 ~~~gV~~vl~-~~dg--~vLl~rRs~~~~~~~g~w~~PGG~vE~~E~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (298)
...+|.++++ ..++ +|||+|+.. +.|.+|||++|+||++ .+|++|||.|
T Consensus 57 ~R~sV~avil~~~~~~phVLLlq~~~------~~f~LPGGkle~gE~~----------------------~eaL~REL~E 108 (208)
T 3bho_A 57 MRRTVEGVLIVHEHRLPHVLLLQLGT------TFFKLPGGELNPGEDE----------------------VEGLKRLMTE 108 (208)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEET------TEEECSEEECCTTCCH----------------------HHHHHHHHHH
T ss_pred CceEEEEEEEEcCCCCcEEEEEEcCC------CcEECCCcccCCCCCH----------------------HHHHHHHHHH
Confidence 4566755554 3444 699999842 4899999999999995 5999999999
Q ss_pred hhCC
Q 022346 202 EIGV 205 (298)
Q Consensus 202 EtGl 205 (298)
|+|+
T Consensus 109 ELg~ 112 (208)
T 3bho_A 109 ILGR 112 (208)
T ss_dssp HHCC
T ss_pred HhCC
Confidence 9997
No 78
>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens}
Probab=95.28 E-value=0.00012 Score=65.71 Aligned_cols=85 Identities=12% Similarity=0.109 Sum_probs=60.6
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHHHhhCc-CCcCC--cceeeeceEeecCCCCCCcceEEEEecCcc
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINK-SLFNG--QKFRYGGHIMRGEGGSSVESHVCLHLGLTD 93 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~~~~~p-~lfng--~~f~~~~~~~~~~~~~~~~~~~~l~lg~T~ 93 (298)
+|||+.|++++++.+|++ |.+. +|.+|.|+..++-.-.. .-+.. +.++.....+.+.+...+++++.|.+|.+
T Consensus 135 pGIG~kTA~~iL~~a~g~-p~~~--VDt~V~Rv~~Rlg~i~~~~~~~~~~~~l~~~a~~~lp~~~~~~~h~~L~~~Gr~- 210 (287)
T 3n5n_X 135 PGVGRYTAGAIASIAFGQ-ATGV--VDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGAT- 210 (287)
T ss_dssp TTCCHHHHHHHHHHHSCC-CCCC--CCHHHHHHHHHHTTCCSCTTSHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH-
T ss_pred CCCCHHHHHHHHHHhcCC-CCcc--ccHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhHH-
Confidence 799999999999999999 6543 89999999998853211 11110 11221112223444566789999999999
Q ss_pred cccccccCCCcchhhc
Q 022346 94 YRTFVGTNLNPLWEKF 109 (298)
Q Consensus 94 yr~~v~T~~~p~~~~~ 109 (298)
+||..+|.|..|
T Consensus 211 ----iC~~r~P~C~~C 222 (287)
T 3n5n_X 211 ----VCTPQRPLCSQC 222 (287)
T ss_dssp ----TSCSSSCCTTSC
T ss_pred ----HcCCCCCCCCCC
Confidence 999999999876
No 79
>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.96.1.2
Probab=94.94 E-value=0.0003 Score=60.83 Aligned_cols=86 Identities=8% Similarity=0.057 Sum_probs=59.6
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHHHh--hCcCCcCCcceeeeceEeecCCCCCCcceEEEEecCccc
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQ--INKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDY 94 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~~~--~~p~lfng~~f~~~~~~~~~~~~~~~~~~~~l~lg~T~y 94 (298)
||||+.|++++++-+|++ |.+ .+|.+|.++..++.. ..+.-..-+.+.-......+.+...+++++.|.+|.+
T Consensus 121 pGIG~~TA~~il~~~~~~-~~~--~vD~~v~Rv~~rl~gl~~~~~~~~~~~l~~~ae~~~P~~~~~~~~~~lv~~G~~-- 195 (221)
T 1kea_A 121 PGVGKYTCAAVMCLAFGK-KAA--MVDANFVRVINRYFGGSYENLNYNHKALWELAETLVPGGKCRDFNLGLMDFSAI-- 195 (221)
T ss_dssp TTCCHHHHHHHHHHTTCC-CCC--CCCHHHHHHHHHHHCGGGTTCCTTSHHHHHHHHHHSCTTCHHHHHHHHHHHHHH--
T ss_pred CCCcHHHHHHHHHHhcCC-Ccc--eecHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHhCChhhHHHHHHHHHHHHHH--
Confidence 799999999999999999 654 389999999988733 2221111111221111223333456678899999999
Q ss_pred ccccccCCCcchhhcc
Q 022346 95 RTFVGTNLNPLWEKFL 110 (298)
Q Consensus 95 r~~v~T~~~p~~~~~~ 110 (298)
+|+..+|.|..|.
T Consensus 196 ---~C~~~~P~C~~Cp 208 (221)
T 1kea_A 196 ---ICAPRKPKCEKCG 208 (221)
T ss_dssp ---TSCSSSCCGGGCT
T ss_pred ---HcCCCCCCCCCCC
Confidence 9999999998763
No 80
>1kg2_A A/G-specific adenine glycosylase; DNA repair, hydrolase; 1.20A {Escherichia coli} SCOP: a.96.1.2 PDB: 1kg3_A 1muy_A 1kg6_A 1kg5_A 1mun_A 1mud_A 1kg4_A 1weg_A 1wei_A* 1wef_A* 1kg7_A 1kqj_A
Probab=92.86 E-value=0.00042 Score=60.00 Aligned_cols=86 Identities=13% Similarity=0.093 Sum_probs=58.5
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHHHh-h-CcCC-cCCcceeeeceEeecCCCCCCcceEEEEecCcc
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQ-I-NKSL-FNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTD 93 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~~~-~-~p~l-fng~~f~~~~~~~~~~~~~~~~~~~~l~lg~T~ 93 (298)
||||+.|++++++-+|++ |.+ .+|.+|.|+..++.. . .+.. -.-..++-......+.+...+++++.|.+|.+
T Consensus 115 pGIG~~TA~~il~~a~~~-~~~--~vD~~v~Rv~~rl~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~lv~~G~~- 190 (225)
T 1kg2_A 115 PGVGRSTAGAILSLSLGK-HFP--ILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAM- 190 (225)
T ss_dssp TTCCHHHHHHHHHHHHCC-SCC--CCCHHHHHHHHHHHTCCSCTTSHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHH-
T ss_pred CCCcHHHHHHHHHHhCCC-Ccc--eeCHHHHHHHHHHcCCCCCCCccchHHHHHHHHHHHCCcccHHHHHHHHHHHHHH-
Confidence 799999999999999999 654 389999999988743 1 1100 00011111111122233455678899999999
Q ss_pred cccccccCCCcchhhcc
Q 022346 94 YRTFVGTNLNPLWEKFL 110 (298)
Q Consensus 94 yr~~v~T~~~p~~~~~~ 110 (298)
+||..+|.|..|.
T Consensus 191 ----~C~~~~P~C~~Cp 203 (225)
T 1kg2_A 191 ----ICTRSKPKCSLCP 203 (225)
T ss_dssp ----TSCSSSCCGGGCT
T ss_pred ----HcCCCCCCCCCCC
Confidence 9999999998764
No 81
>2abk_A Endonuclease III; DNA-repair, DNA glycosylase; 1.85A {Escherichia coli} SCOP: a.96.1.1
Probab=92.73 E-value=0.00078 Score=57.72 Aligned_cols=83 Identities=11% Similarity=0.037 Sum_probs=56.5
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHHHhhCcCCcCCcceeeeceEeecCCCCCCcceEEEEecCccccc
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYRT 96 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~~~~~p~lfng~~f~~~~~~~~~~~~~~~~~~~~l~lg~T~yr~ 96 (298)
||||+.|+++++.-+|++ |.. .+|.+|.++..++--..+. +-..+........+.+....++++.+.+|.+
T Consensus 115 ~GIG~~tA~~il~~~~~~-~~~--~vD~~v~Rv~~rlgl~~~~--~~~~~~~~~~~~~p~~~~~~~~~~l~~~G~~---- 185 (211)
T 2abk_A 115 PGVGRKTANVVLNTAFGW-PTI--AVDTHIFRVCNRTQFAPGK--NVEQVEEKLLKVVPAEFKVDCHHWLILHGRY---- 185 (211)
T ss_dssp TTCCHHHHHHHHHHHHCC-CCC--CCCHHHHHHHHHHCSSCCS--SHHHHHHHHHHHSCGGGTTTHHHHHHHHHHH----
T ss_pred CCCChHHHHHHHHHHCCC-CcC--CcCHHHHHHHHHhCCCCCC--CHHHHHHHHHHhcChhhHHHHHHHHHHHHHH----
Confidence 799999999999999998 543 3789999997765211110 1111111111222334456788899999999
Q ss_pred ccccCCCcchhhc
Q 022346 97 FVGTNLNPLWEKF 109 (298)
Q Consensus 97 ~v~T~~~p~~~~~ 109 (298)
+|+..+|.|..|
T Consensus 186 -~C~~~~P~C~~C 197 (211)
T 2abk_A 186 -TCIARKPRCGSC 197 (211)
T ss_dssp -TSCSSSCCGGGC
T ss_pred -HCCCCCCCCCCC
Confidence 999999999866
No 82
>1orn_A Endonuclease III; DNA repair, DNA glycosylase, [4Fe-4S] cluster, iron-sulfur cluster, hydrolase/DNA complex; HET: PED; 1.70A {Geobacillus stearothermophilus} SCOP: a.96.1.1 PDB: 1orp_A* 1p59_A*
Probab=89.10 E-value=0.0019 Score=55.89 Aligned_cols=83 Identities=10% Similarity=0.069 Sum_probs=54.8
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHHHhhC-cCCcCCcceeeeceEeecCCCCCCcceEEEEecCcccc
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQIN-KSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTDYR 95 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~~~~~-p~lfng~~f~~~~~~~~~~~~~~~~~~~~l~lg~T~yr 95 (298)
||||+.|+++++.-+|++ |.. .+|.+|.|+..++--.. +.-+ ..+........+.+...++++..+.+|.+
T Consensus 119 pGIG~~TA~~il~~a~g~-~~~--~vD~~v~Rv~~rlg~~~~~~~~--~~~~~~l~~~~p~~~~~~~~~~lv~~G~~--- 190 (226)
T 1orn_A 119 PGVGRKTANVVVSVAFGV-PAI--AVDTHVERVSKRLGFCRWDDSV--LEVEKTLMKIIPKEEWSITHHRMIFFGRY--- 190 (226)
T ss_dssp TTCCHHHHHHHHHHHHCC-CCC--CCCHHHHHHHHHHTSSCTTCCH--HHHHHHHHHHSCGGGHHHHHHHHHHHHHH---
T ss_pred CCccHHHHHHHHHHHCCC-cee--eeCHHHHHHHHHhCCCCCCCCH--HHHHHHHHHhcChhhHHHHHHHHHHHHHH---
Confidence 799999999999999999 643 38999999987752211 1111 01110011111222234567888889988
Q ss_pred cccccCCCcchhhc
Q 022346 96 TFVGTNLNPLWEKF 109 (298)
Q Consensus 96 ~~v~T~~~p~~~~~ 109 (298)
+|+..+|.|..|
T Consensus 191 --~C~~~~P~C~~C 202 (226)
T 1orn_A 191 --HCKAQSPQCPSC 202 (226)
T ss_dssp --TSCSSCCCGGGC
T ss_pred --HcCCCCCCCCCC
Confidence 999999999876
No 83
>4e9f_A Methyl-CPG-binding domain protein 4; HHH DNA glycosylase family, hydrolase-DNA complex; HET: DNA 3DR; 1.79A {Homo sapiens} PDB: 4e9e_A* 4e9g_A* 4e9h_A* 4ea5_A* 4dk9_A* 1ngn_A 4ea4_A* 4ew4_A* 4evv_A* 4ew0_A* 3iho_A
Probab=77.97 E-value=0.31 Score=39.64 Aligned_cols=38 Identities=8% Similarity=-0.069 Sum_probs=30.1
Q ss_pred CCCCCCceEEEeccCCCC-CCCCCcchhhHHHHHHHHHHhh
Q 022346 17 HGFSPSEVSVVFDESYDR-VPHPDNNLENSISEIWDSRVQI 56 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~-~p~p~~~~~~~I~~~w~~~~~~ 56 (298)
||||++|++++.+.+||+ ++.+ ..|.++.+.|+.+...
T Consensus 110 pGVG~yTAdav~~F~~~e~~~V~--p~D~~l~r~l~wl~~~ 148 (161)
T 4e9f_A 110 HGIGKYGNDSYRIFCVNEWKQVH--PEDHKLNKYHDWLWEN 148 (161)
T ss_dssp TTCCHHHHHHHHHHTSSCGGGCC--CCSHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHHHHCCCCCCCC--CCcHHHHHHHHHHHcC
Confidence 799999999999999995 2322 2678999998877654
No 84
>1pu6_A 3-methyladenine DNA glycosylase; helix-hairpin-helix, base excision repair, hydrolase; HET: KCX; 1.64A {Helicobacter pylori} SCOP: a.96.1.5 PDB: 1pu7_A* 1pu8_A*
Probab=40.26 E-value=3.6 Score=34.80 Aligned_cols=34 Identities=3% Similarity=0.001 Sum_probs=29.1
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHH
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSR 53 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~ 53 (298)
||||+.|+++++.-+|++ |.. .+|.+|.|+..++
T Consensus 127 pGIG~kTA~~il~~a~~~-~~~--~vD~~v~Ri~~rl 160 (218)
T 1pu6_A 127 KGIGKESADAILCYACAK-EVM--VVDKYSYLFLKKL 160 (218)
T ss_dssp TTCCHHHHHHHHHHTTCC-SCC--CCCHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHCCC-Ccc--ccCHHHHHHHHHc
Confidence 899999999999999998 643 3789999887763
No 85
>4b21_A Probable DNA-3-methyladenine glycosylase 2; hydrolase-DNA complex, helix-hairpin-helix; HET: BGC 3DR; 1.45A {Schizosaccharomyces pombe} PDB: 4b22_A* 4b23_A* 4b24_A*
Probab=27.70 E-value=9.5 Score=32.56 Aligned_cols=37 Identities=5% Similarity=-0.085 Sum_probs=30.3
Q ss_pred CCCCCCceEEEeccCCCCCCCCCcchhhHHHHHHHHHH
Q 022346 17 HGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRV 54 (298)
Q Consensus 17 ~g~~~~~v~~~~s~~f~~~p~p~~~~~~~I~~~w~~~~ 54 (298)
+|||+.|+++++.-+|++ |.-++..|-+|.++..+..
T Consensus 156 ~GIG~~TA~~ill~alg~-pd~fpv~D~~v~r~~~rl~ 192 (232)
T 4b21_A 156 KGVKRWTIEMYSIFTLGR-LDIMPADDSTLKNEAKEFF 192 (232)
T ss_dssp TTCCHHHHHHHHHHTSCC-SSCCCTTCHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHhCCC-CCeeeCccHHHHHHHHHHh
Confidence 899999999999999999 5433324889999988864
No 86
>3fhg_A Mjogg, N-glycosylase/DNA lyase, DNA-(apurinic; helix-hairpin-helix, 8-oxoguanine, 8-OXOG, DNA damage, DNA repair, glycosidase, hydrolase; 1.90A {Sulfolobus solfataricus}
Probab=20.41 E-value=12 Score=31.19 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=27.1
Q ss_pred CCCCCCceEEEecc-CCCCCCCCCcchhhHHHHHHHHH
Q 022346 17 HGFSPSEVSVVFDE-SYDRVPHPDNNLENSISEIWDSR 53 (298)
Q Consensus 17 ~g~~~~~v~~~~s~-~f~~~p~p~~~~~~~I~~~w~~~ 53 (298)
||||+.|+++++.- +| . +.+ .+|.+|.|+..++
T Consensus 123 pGIG~kTA~~il~~~~~-~-~~~--~vD~~v~Ri~~rl 156 (207)
T 3fhg_A 123 KGIGMQEASHFLRNVGY-F-DLA--IIDRHIIDFMRRI 156 (207)
T ss_dssp TTCCHHHHHHHHHHTTC-C-SSC--CCCHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHhCC-C-Ccc--eecHHHHHHHHHc
Confidence 89999999999985 66 3 544 3899999998886
Done!