Query 022349
Match_columns 298
No_of_seqs 120 out of 863
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 02:51:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022349.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022349hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1387 Glycosyltransferase [C 100.0 4E-56 8.7E-61 405.4 25.2 252 31-294 40-294 (465)
2 PLN02949 transferase, transfer 100.0 1.1E-53 2.5E-58 417.6 29.8 271 25-296 24-294 (463)
3 cd03806 GT1_ALG11_like This fa 100.0 1E-45 2.2E-50 357.8 26.1 262 35-297 1-264 (419)
4 cd03804 GT1_wbaZ_like This fam 99.8 3.7E-19 7.9E-24 166.8 18.7 219 36-295 1-220 (351)
5 cd03805 GT1_ALG2_like This fam 99.8 1.8E-18 3.8E-23 164.0 21.9 226 35-297 1-238 (392)
6 PF13439 Glyco_transf_4: Glyco 99.5 2.3E-14 4.9E-19 119.5 9.0 176 37-259 1-177 (177)
7 cd03818 GT1_ExpC_like This fam 99.5 3.1E-12 6.7E-17 122.5 19.8 223 36-297 1-239 (396)
8 PRK15179 Vi polysaccharide bio 99.5 1.4E-11 3E-16 126.1 23.0 76 221-297 458-544 (694)
9 cd04955 GT1_like_6 This family 99.4 6.6E-12 1.4E-16 116.8 18.5 208 36-296 1-219 (363)
10 cd03809 GT1_mtfB_like This fam 99.4 5E-12 1.1E-16 116.7 17.5 213 36-297 1-222 (365)
11 KOG0853 Glycosyltransferase [C 99.4 2.2E-13 4.7E-18 132.5 5.9 233 33-298 33-301 (495)
12 cd03796 GT1_PIG-A_like This fa 99.4 1.3E-11 2.9E-16 118.3 17.7 213 36-296 1-219 (398)
13 cd03819 GT1_WavL_like This fam 99.4 3.3E-11 7.1E-16 111.9 18.4 195 40-297 3-212 (355)
14 cd03820 GT1_amsD_like This fam 99.4 4.3E-11 9.3E-16 108.6 17.5 201 36-296 1-204 (348)
15 cd03811 GT1_WabH_like This fam 99.4 2.1E-11 4.5E-16 110.6 15.4 208 36-297 1-216 (353)
16 cd04962 GT1_like_5 This family 99.3 3.5E-11 7.7E-16 112.7 16.3 210 35-296 1-223 (371)
17 PRK10307 putative glycosyl tra 99.3 1E-10 2.2E-15 112.5 19.4 235 35-296 1-255 (412)
18 TIGR03088 stp2 sugar transfera 99.3 7.8E-11 1.7E-15 111.3 18.2 209 34-296 1-220 (374)
19 TIGR03449 mycothiol_MshA UDP-N 99.3 4.4E-11 9.6E-16 114.3 16.3 221 39-296 11-245 (405)
20 cd03812 GT1_CapH_like This fam 99.3 3.6E-11 7.9E-16 111.7 15.0 208 36-297 1-219 (358)
21 PRK09922 UDP-D-galactose:(gluc 99.3 4.6E-11 9.9E-16 113.0 15.5 201 35-296 1-208 (359)
22 TIGR02149 glgA_Coryne glycogen 99.3 1.2E-10 2.7E-15 110.1 17.0 213 35-296 1-227 (388)
23 PLN02871 UDP-sulfoquinovose:DA 99.3 1.3E-10 2.9E-15 113.9 17.7 218 32-295 56-288 (465)
24 cd03802 GT1_AviGT4_like This f 99.3 2.4E-10 5.2E-15 105.3 17.6 190 35-294 1-195 (335)
25 cd03801 GT1_YqgM_like This fam 99.3 4.1E-10 8.9E-15 102.3 18.4 216 36-297 1-226 (374)
26 cd03807 GT1_WbnK_like This fam 99.2 6.2E-10 1.3E-14 101.8 17.3 207 36-297 1-220 (365)
27 cd03795 GT1_like_4 This family 99.2 6.2E-10 1.4E-14 103.1 17.3 208 36-296 1-217 (357)
28 cd03822 GT1_ecORF704_like This 99.2 5.2E-10 1.1E-14 103.3 16.6 198 36-297 1-212 (366)
29 cd03799 GT1_amsK_like This is 99.2 8.4E-10 1.8E-14 102.1 17.8 202 36-297 1-206 (355)
30 PRK10125 putative glycosyl tra 99.2 2.1E-09 4.5E-14 104.0 20.2 79 215-295 184-268 (405)
31 cd05844 GT1_like_7 Glycosyltra 99.2 4.9E-10 1.1E-14 104.8 15.1 133 136-296 78-214 (367)
32 cd03821 GT1_Bme6_like This fam 99.2 2.4E-09 5.1E-14 98.3 17.7 217 36-297 1-230 (375)
33 cd03800 GT1_Sucrose_synthase T 99.1 2.3E-09 5E-14 101.0 17.7 81 215-296 157-246 (398)
34 cd03823 GT1_ExpE7_like This fa 99.1 1.9E-09 4.2E-14 98.8 16.7 73 223-296 145-217 (359)
35 cd04951 GT1_WbdM_like This fam 99.1 2.3E-09 5E-14 99.4 16.9 202 36-297 1-215 (360)
36 TIGR02472 sucr_P_syn_N sucrose 99.1 3.5E-09 7.7E-14 103.2 17.6 226 47-294 25-272 (439)
37 cd03808 GT1_cap1E_like This fa 99.1 1.1E-08 2.4E-13 93.1 19.9 209 36-296 1-214 (359)
38 cd03794 GT1_wbuB_like This fam 99.1 6.7E-09 1.5E-13 95.6 18.6 232 36-297 1-247 (394)
39 cd03798 GT1_wlbH_like This fam 99.1 8E-09 1.7E-13 94.3 18.2 130 138-297 91-229 (377)
40 cd03817 GT1_UGDG_like This fam 99.0 1.3E-08 2.9E-13 93.5 17.4 218 36-297 1-229 (374)
41 cd03792 GT1_Trehalose_phosphor 99.0 1.2E-08 2.6E-13 96.7 16.8 197 36-296 1-216 (372)
42 cd03814 GT1_like_2 This family 99.0 7.3E-09 1.6E-13 95.4 14.8 213 36-297 1-224 (364)
43 cd03816 GT1_ALG1_like This fam 99.0 2.4E-08 5.3E-13 96.7 18.7 85 209-296 148-258 (415)
44 PRK00654 glgA glycogen synthas 99.0 1.3E-08 2.9E-13 100.0 16.4 82 215-297 191-309 (466)
45 TIGR02468 sucrsPsyn_pln sucros 99.0 4.5E-08 9.7E-13 103.3 19.8 250 29-296 164-505 (1050)
46 cd03791 GT1_Glycogen_synthase_ 98.9 4.3E-08 9.3E-13 96.0 17.4 82 215-297 204-323 (476)
47 PRK15427 colanic acid biosynth 98.9 3.1E-08 6.6E-13 95.9 16.1 81 215-297 168-249 (406)
48 PF13579 Glyco_trans_4_4: Glyc 98.9 9.2E-09 2E-13 84.0 8.4 154 48-252 1-160 (160)
49 TIGR02095 glgA glycogen/starch 98.9 1.3E-07 2.8E-12 92.9 17.9 82 215-297 199-318 (473)
50 cd03825 GT1_wcfI_like This fam 98.8 2.4E-07 5.2E-12 86.0 17.4 78 219-297 133-220 (365)
51 TIGR02470 sucr_synth sucrose s 98.8 2.7E-07 5.8E-12 95.4 18.1 240 34-295 255-575 (784)
52 PLN02316 synthase/transferase 98.8 6.9E-07 1.5E-11 94.6 21.2 218 32-296 585-866 (1036)
53 PLN02275 transferase, transfer 98.8 3.8E-07 8.1E-12 87.0 17.3 83 209-295 153-238 (371)
54 PRK15484 lipopolysaccharide 1, 98.8 1.9E-07 4.1E-12 89.4 15.0 75 221-297 139-220 (380)
55 PRK15490 Vi polysaccharide bio 98.8 3E-07 6.6E-12 91.6 16.8 76 219-296 337-424 (578)
56 TIGR03087 stp1 sugar transfera 98.7 5.7E-07 1.2E-11 86.2 16.6 80 210-289 161-244 (397)
57 PRK00726 murG undecaprenyldiph 98.7 3.7E-07 8E-12 86.0 14.7 202 35-296 2-210 (357)
58 PRK14099 glycogen synthase; Pr 98.6 2.9E-06 6.3E-11 84.1 18.9 81 215-296 203-321 (485)
59 cd03785 GT1_MurG MurG is an N- 98.6 1.1E-06 2.3E-11 82.2 14.9 193 45-295 7-207 (350)
60 cd03813 GT1_like_3 This family 98.5 9.2E-07 2E-11 87.2 12.5 143 139-297 172-320 (475)
61 cd04949 GT1_gtfA_like This fam 98.5 2.4E-06 5.2E-11 80.5 12.9 133 139-297 98-231 (372)
62 cd04946 GT1_AmsK_like This fam 98.3 3.2E-06 6.9E-11 81.7 10.8 79 216-297 178-257 (407)
63 PLN00142 sucrose synthase 98.3 4.3E-06 9.4E-11 86.8 11.8 81 215-296 469-599 (815)
64 PRK14098 glycogen synthase; Pr 98.3 2.4E-05 5.2E-10 77.7 16.7 82 215-297 214-334 (489)
65 PLN02846 digalactosyldiacylgly 98.3 2.1E-05 4.5E-10 77.4 15.8 225 32-297 2-255 (462)
66 TIGR01133 murG undecaprenyldip 98.3 1.7E-05 3.6E-10 74.1 14.0 71 217-296 131-206 (348)
67 TIGR02918 accessory Sec system 98.2 2.6E-05 5.7E-10 77.6 14.4 137 134-297 205-346 (500)
68 PHA01630 putative group 1 glyc 98.1 1.2E-05 2.5E-10 76.0 9.4 76 219-297 92-169 (331)
69 PHA01633 putative glycosyl tra 98.1 1.5E-05 3.3E-10 75.4 8.7 76 219-297 90-175 (335)
70 PLN02939 transferase, transfer 98.1 0.001 2.3E-08 70.1 22.8 78 218-296 690-805 (977)
71 PLN02501 digalactosyldiacylgly 98.0 6.4E-05 1.4E-09 76.7 12.0 132 133-296 427-572 (794)
72 cd03793 GT1_Glycogen_synthase_ 97.9 5.1E-05 1.1E-09 76.0 8.7 81 214-296 219-325 (590)
73 PRK13609 diacylglycerol glucos 97.7 0.00032 7E-09 66.7 11.8 76 217-294 143-227 (380)
74 PRK05749 3-deoxy-D-manno-octul 97.7 0.0039 8.4E-08 60.3 19.1 79 213-296 170-257 (425)
75 PF09314 DUF1972: Domain of un 97.6 0.0061 1.3E-07 52.9 17.0 170 35-250 2-181 (185)
76 TIGR00215 lpxB lipid-A-disacch 97.3 0.0018 3.9E-08 62.3 10.6 127 131-296 80-220 (385)
77 cd03788 GT1_TPS Trehalose-6-Ph 97.2 0.0015 3.3E-08 64.3 9.4 53 244-297 227-291 (460)
78 PRK13608 diacylglycerol glucos 97.1 0.0028 6.1E-08 61.0 9.9 74 218-293 144-226 (391)
79 PLN02605 monogalactosyldiacylg 97.1 0.0025 5.5E-08 60.9 9.5 77 217-295 146-231 (382)
80 cd01635 Glycosyltransferase_GT 97.1 0.0053 1.1E-07 52.3 10.5 36 37-74 1-37 (229)
81 PF12038 DUF3524: Domain of un 97.0 0.013 2.9E-07 49.7 11.3 35 35-76 1-35 (168)
82 TIGR02400 trehalose_OtsA alpha 96.6 0.015 3.2E-07 57.5 10.5 53 244-297 222-286 (456)
83 cd04950 GT1_like_1 Glycosyltra 96.6 0.026 5.6E-07 53.8 11.7 74 213-289 145-225 (373)
84 PLN03063 alpha,alpha-trehalose 96.2 0.026 5.7E-07 59.5 10.0 53 244-297 242-306 (797)
85 KOG1111 N-acetylglucosaminyltr 96.1 0.012 2.7E-07 55.6 6.1 203 46-297 13-222 (426)
86 PF12000 Glyco_trans_4_3: Gkyc 95.9 0.23 5.1E-06 42.6 12.5 102 139-258 65-170 (171)
87 cd03786 GT1_UDP-GlcNAc_2-Epime 95.3 0.13 2.7E-06 48.2 9.9 76 219-296 139-228 (363)
88 PRK14501 putative bifunctional 95.3 0.082 1.8E-06 55.2 9.2 53 244-297 228-292 (726)
89 PF13477 Glyco_trans_4_2: Glyc 94.8 0.91 2E-05 36.2 12.2 126 51-229 10-139 (139)
90 PRK00025 lpxB lipid-A-disaccha 94.7 0.16 3.5E-06 48.0 8.7 74 219-296 132-215 (380)
91 COG0438 RfaG Glycosyltransfera 93.7 0.3 6.6E-06 43.1 7.9 75 221-297 150-226 (381)
92 TIGR03492 conserved hypothetic 93.4 0.46 9.9E-06 46.0 9.0 221 44-296 3-234 (396)
93 COG1519 KdtA 3-deoxy-D-manno-o 92.1 4.9 0.00011 39.1 13.9 185 49-297 60-256 (419)
94 TIGR02398 gluc_glyc_Psyn gluco 91.7 1.2 2.6E-05 44.4 9.7 52 245-297 249-312 (487)
95 TIGR00236 wecB UDP-N-acetylglu 90.9 0.9 2E-05 42.8 7.6 74 221-296 141-225 (365)
96 PRK09814 beta-1,6-galactofuran 90.0 2.8 6.1E-05 39.2 10.1 64 215-281 117-181 (333)
97 TIGR03713 acc_sec_asp1 accesso 88.3 0.93 2E-05 45.6 5.8 74 219-297 270-347 (519)
98 KOG2941 Beta-1,4-mannosyltrans 88.2 13 0.00028 35.7 12.7 224 29-295 8-280 (444)
99 PRK12446 undecaprenyldiphospho 85.3 13 0.00029 35.2 11.7 42 128-172 79-123 (352)
100 PLN03064 alpha,alpha-trehalose 85.1 4.4 9.5E-05 43.6 9.0 28 269-297 363-390 (934)
101 PF08660 Alg14: Oligosaccharid 84.2 17 0.00037 30.9 10.7 34 122-156 74-107 (170)
102 COG0707 MurG UDP-N-acetylgluco 82.8 11 0.00024 36.1 9.9 37 128-164 79-117 (357)
103 PF05693 Glycogen_syn: Glycoge 82.7 2 4.4E-05 43.8 5.0 124 160-295 166-319 (633)
104 PF04413 Glycos_transf_N: 3-De 81.9 18 0.00039 31.2 10.1 37 212-248 140-176 (186)
105 PF04007 DUF354: Protein of un 81.0 16 0.00035 34.6 10.2 97 52-172 14-114 (335)
106 PF08323 Glyco_transf_5: Starc 78.8 16 0.00035 32.8 9.1 34 41-77 10-43 (245)
107 PF13528 Glyco_trans_1_3: Glyc 78.2 19 0.00042 32.8 9.7 36 35-76 1-36 (318)
108 PRK10017 colanic acid biosynth 70.4 1.1E+02 0.0025 29.9 14.9 43 35-77 1-43 (426)
109 PF06925 MGDG_synth: Monogalac 66.5 19 0.00042 30.1 6.2 36 217-253 133-169 (169)
110 PF00982 Glyco_transf_20: Glyc 61.1 30 0.00065 34.5 7.3 27 270-297 277-303 (474)
111 PF11997 DUF3492: Domain of un 60.1 30 0.00065 31.7 6.7 86 140-241 172-264 (268)
112 COG4671 Predicted glycosyl tra 57.1 1.2E+02 0.0025 29.4 10.0 47 30-77 5-51 (400)
113 COG0297 GlgA Glycogen synthase 53.2 22 0.00048 35.5 4.9 80 216-296 203-320 (487)
114 PRK01021 lpxB lipid-A-disaccha 45.1 50 0.0011 34.0 6.0 37 133-172 303-346 (608)
115 TIGR02201 heptsyl_trn_III lipo 43.7 1.3E+02 0.0029 27.9 8.4 38 36-76 1-38 (344)
116 PF02684 LpxB: Lipid-A-disacch 39.1 69 0.0015 30.9 5.7 36 134-172 76-118 (373)
117 PF12273 RCR: Chitin synthesis 37.9 27 0.00059 28.2 2.4 8 27-34 22-29 (130)
118 PRK10422 lipopolysaccharide co 37.6 2.3E+02 0.005 26.5 9.0 42 32-76 3-44 (352)
119 cd03789 GT1_LPS_heptosyltransf 36.7 3E+02 0.0065 24.6 9.4 38 219-259 196-233 (279)
120 PRK10916 ADP-heptose:LPS hepto 35.6 2.9E+02 0.0063 25.7 9.4 38 35-75 1-38 (348)
121 PF11346 DUF3149: Protein of u 34.1 92 0.002 20.3 3.9 32 2-33 9-40 (42)
122 TIGR03472 HpnI hopanoid biosyn 33.2 3E+02 0.0064 26.0 9.1 34 35-72 41-75 (373)
123 PRK10964 ADP-heptose:LPS hepto 31.2 2.6E+02 0.0057 25.6 8.2 38 35-75 1-38 (322)
124 COG0380 OtsA Trehalose-6-phosp 30.0 5.3E+02 0.012 25.9 10.3 28 269-297 282-309 (486)
125 TIGR00696 wecB_tagA_cpsF bacte 28.3 2.2E+02 0.0048 24.3 6.6 34 32-72 46-79 (177)
126 KOG3339 Predicted glycosyltran 27.9 4.2E+02 0.0091 23.3 9.1 33 36-72 40-72 (211)
127 PF13844 Glyco_transf_41: Glyc 27.1 6.2E+02 0.013 25.3 10.2 109 35-172 1-112 (468)
128 PF13940 Ldr_toxin: Toxin Ldr, 26.3 1.4E+02 0.0031 18.4 3.5 25 2-26 4-28 (35)
129 cd06533 Glyco_transf_WecG_TagA 25.5 2.4E+02 0.0052 23.7 6.3 34 31-71 43-76 (171)
130 PF05762 VWA_CoxE: VWA domain 25.1 1.2E+02 0.0025 26.8 4.4 47 30-76 53-99 (222)
131 PF06024 DUF912: Nucleopolyhed 24.6 59 0.0013 25.2 2.1 29 4-32 61-92 (101)
132 PF06667 PspB: Phage shock pro 24.0 1.2E+02 0.0027 22.3 3.6 24 7-30 5-28 (75)
133 TIGR02094 more_P_ylases alpha- 22.5 77 0.0017 32.6 3.1 26 270-296 390-415 (601)
134 TIGR02195 heptsyl_trn_II lipop 22.0 5.6E+02 0.012 23.5 8.6 37 36-75 1-37 (334)
135 COG0859 RfaF ADP-heptose:LPS h 21.5 5.4E+02 0.012 23.9 8.5 40 34-76 1-40 (334)
No 1
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=4e-56 Score=405.39 Aligned_cols=252 Identities=38% Similarity=0.702 Sum_probs=225.7
Q ss_pred cCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecC-CCeEEEccccc
Q 022349 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLH-PPKVVHLYRRK 109 (298)
Q Consensus 31 ~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~-~~~~i~l~~~~ 109 (298)
++.-..||||||+|+.|||||||+|.+++++|+.+|++.++|||++.+++++.++++++..|++++++ .+.|+.|+.+.
T Consensus 40 ~k~~ktvgfFHPYCNAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~ 119 (465)
T KOG1387|consen 40 EKNVKTVGFFHPYCNAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNVTPENILNKVKNKFDIDLDSDNIFFIYLKLRY 119 (465)
T ss_pred hhhceEEEEecccccCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCCCHHHHHHHHHHhcCceecccceEEEEEEeee
Confidence 34446899999999999999999999999999999999999999998899999999999999999855 45999999999
Q ss_pred eeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccc-cccCCeEEEEeecCCcchHHhhhhhcccccc
Q 022349 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLA-RIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (298)
Q Consensus 110 ~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~-~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y 188 (298)
+++.+.|++||+++|++|+|+++++++-++.||++|||+|++|.+|+. ++.+.|+++|+|||.+|+||+..+..+..
T Consensus 120 lVea~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~-- 197 (465)
T KOG1387|consen 120 LVEASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQK-- 197 (465)
T ss_pred eeecccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhhh--
Confidence 999999999999999999999999999999999999999999999964 47899999999999999999998875432
Q ss_pred cchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCC
Q 022349 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTE 268 (298)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~ 268 (298)
++++...|..|||+|..+|.+++..||.+++||+||.+||+++|+ ..+..++||||++++.++....++++
T Consensus 198 --------s~~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~-~~~~~iVyPPC~~e~lks~~~te~~r 268 (465)
T KOG1387|consen 198 --------SGILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQ-SNTCSIVYPPCSTEDLKSKFGTEGER 268 (465)
T ss_pred --------cchhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhh-ccceeEEcCCCCHHHHHHHhcccCCc
Confidence 235666788999999999999999999999999999999999999 47889999999999887543334455
Q ss_pred CcEEEEEcCCCCccChH-HHHHHHHHh
Q 022349 269 YPAIISVAQFRPEKVRY-KLISTRYYS 294 (298)
Q Consensus 269 ~~~iLsvgRl~p~Kn~~-l~I~~Afa~ 294 (298)
++-+|++|||+||||+. ++++ |+..
T Consensus 269 ~~~ll~l~Q~RPEKnH~~Lql~-Al~~ 294 (465)
T KOG1387|consen 269 ENQLLSLAQFRPEKNHKILQLF-ALYL 294 (465)
T ss_pred ceEEEEEeecCcccccHHHHHH-HHHH
Confidence 89999999999999999 6666 6543
No 2
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.1e-53 Score=417.60 Aligned_cols=271 Identities=78% Similarity=1.346 Sum_probs=245.7
Q ss_pred HHhhhccCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEE
Q 022349 25 HVHNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVH 104 (298)
Q Consensus 25 ~~~~~~~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~ 104 (298)
-.++.+..+|++|+|+||+||.|||||||+|+++.+||+.+++++|+|||+++|.++++++.++.+.|+++++.++.|+.
T Consensus 24 ~~~~~~~~~~~~v~f~HP~~~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~~~~~~l~~~~~~~~i~~~~~~~~v~ 103 (463)
T PLN02949 24 SVLRARRSRKRAVGFFHPYTNDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDASPDSLAARARDRFGVELLSPPKVVH 103 (463)
T ss_pred HHHhcccCCCcEEEEECCCCCCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCCCHHHHHHHHHhhcceecCCCceEEE
Confidence 44788899999999999999999999999999999999999999999999999888888888888899999988889999
Q ss_pred ccccceeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhcc
Q 022349 105 LYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREG 184 (298)
Q Consensus 105 l~~~~~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~ 184 (298)
++.++|++++.||+||+++|+++++.++++++.+..||+++||+|+++++|++++.++|+++|||||++|.||+..++++
T Consensus 104 l~~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~ 183 (463)
T PLN02949 104 LRKRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTYPLARLFGCKVVCYTHYPTISSDMISRVRDR 183 (463)
T ss_pred eccccccccccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHHHHHHhcCCcEEEEEeCCcchHHHHHHHhhc
Confidence 97789999999999999999999999999998777889999999999999987766899999999999999999999999
Q ss_pred cccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC
Q 022349 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE 264 (298)
Q Consensus 185 ~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~ 264 (298)
+..|+|+++++++.+.+.+|.+|+++++++++++.+.+|.|++||+||++++++.|+.+.++.|+|||||++.+...+.+
T Consensus 184 ~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~~ 263 (463)
T PLN02949 184 SSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLE 263 (463)
T ss_pred ccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCcc
Confidence 99999999999988888899999999999999999999999999999999999999854578999999998766432222
Q ss_pred CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 265 RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
...++++++++|||+|+||++++|+ ||++++
T Consensus 264 ~~~~~~~il~vGR~~~~Kg~~llI~-A~~~l~ 294 (463)
T PLN02949 264 RSEDPPYIISVAQFRPEKAHALQLE-AFALAL 294 (463)
T ss_pred ccCCCCEEEEEEeeeccCCHHHHHH-HHHHHH
Confidence 2223579999999999999999999 999865
No 3
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1e-45 Score=357.80 Aligned_cols=262 Identities=50% Similarity=0.892 Sum_probs=230.9
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEcc-ccceeec
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY-RRKWIEE 113 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~-~~~~~~~ 113 (298)
..||||||+||.|||||||+|+++.+|++.+++++|+|||++++.+.+.++++..+.|++++.++++++.+. .+.++++
T Consensus 1 ~~~~f~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 80 (419)
T cd03806 1 NTVGFFHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEA 80 (419)
T ss_pred CeEEEECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeecc
Confidence 369999999999999999999999999999999999999999877776777888889999888888877653 5679999
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccccc-ccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
+.++++++++|+++.+.++++.+.+..|||+++++|++++.|+++ ++++|+|+|||+|.+|+||+..++.++..|+|+.
T Consensus 81 ~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~ 160 (419)
T cd03806 81 STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSA 160 (419)
T ss_pred ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCcc
Confidence 999999999999999999998876678999999999999999865 5789999999999999999988888888899999
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCcEE
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAI 272 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~i 272 (298)
++++++..+.+|.+||+++.++++++.+.+|.+++||+||++++++.|+...++.|||||||++.+...+.....++..+
T Consensus 161 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~~~~~~~i 240 (419)
T cd03806 161 TIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDEKTRENQI 240 (419)
T ss_pred chhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhcccccccccCCcEE
Confidence 99999888889999999999999999999999999999999999999974337899999999987753221111225799
Q ss_pred EEEcCCCCccChHHHHHHHHHhhhh
Q 022349 273 ISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 273 LsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
+++||++|+||++++|+ ||+++++
T Consensus 241 l~vgr~~~~K~~~~li~-A~~~l~~ 264 (419)
T cd03806 241 LSIAQFRPEKNHPLQLR-AFAKLLK 264 (419)
T ss_pred EEEEeecCCCCHHHHHH-HHHHHHH
Confidence 99999999999999999 9998864
No 4
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.83 E-value=3.7e-19 Score=166.77 Aligned_cols=219 Identities=18% Similarity=0.168 Sum_probs=133.7
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||||+|+++...|||||++.++++++. +++ ++|...+...... ... . ..++...+.. . +
T Consensus 1 ~i~~~~~~~~~~GG~E~~~~~l~~~l~----~~~--v~~~~~~~~~~~~--~~~----~---~~~~~~~~~~---~-~-- 59 (351)
T cd03804 1 KVAIVHDWLVNIGGGEKVVEALARLFP----DAD--IFTLVDDPDKLPR--LLR----L---KKIRTSFIQK---L-P-- 59 (351)
T ss_pred CEEEEEeccccCCCHHHHHHHHHHhCC----CCC--EEEEeecCCccch--hhc----C---Cceeechhhh---c-h--
Confidence 699999999989999999988888763 343 3443322111100 000 0 0000111100 0 0
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIA 195 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~ 195 (298)
...+.....+..+..+++.+...++|++++++. .....+....+.+++.|||.|. +++|+....| ..
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~-~~~~~~~~~~~~~~~~~~h~~~------~~~~~~~~~~-----~~ 126 (351)
T cd03804 60 -FARRRYRKYLPLMPLAIEQFDLSGYDLVISSSH-AVAKGVITRPDQLHICYCHTPM------RYAWDLYHDY-----LK 126 (351)
T ss_pred -hhHhhHhhhCchhhHHHHhccccCCCEEEEcCc-HHhccccCCCCCcEEEEeCCch------HHHhcCchHh-----hh
Confidence 000111111123333455566678998887643 2222222234789999999998 7777643222 11
Q ss_pred hchhh-hHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCcEEEE
Q 022349 196 QSNWL-SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIIS 274 (298)
Q Consensus 196 ~~~~~-~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLs 274 (298)
..... ........+.+..+...+.+++|.++++|+.+++.+++.++ .+..|+|||+|.+.+... .. +++++++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~--~~--~~~~il~ 200 (351)
T cd03804 127 ESGLGKRLALRLLLHYLRIWDRRSAARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPA--EE--KEDYYLS 200 (351)
T ss_pred hcccchhhHHHHHHHHHHHHHHHHhcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcC--CC--CCCEEEE
Confidence 11111 11112233445555677789999999999999999999997 788999999999887622 11 2579999
Q ss_pred EcCCCCccChHHHHHHHHHhh
Q 022349 275 VAQFRPEKVRYKLISTRYYSY 295 (298)
Q Consensus 275 vgRl~p~Kn~~l~I~~Afa~~ 295 (298)
+||+.++||++.+|+ ||+++
T Consensus 201 ~G~~~~~K~~~~li~-a~~~~ 220 (351)
T cd03804 201 VGRLVPYKRIDLAIE-AFNKL 220 (351)
T ss_pred EEcCccccChHHHHH-HHHHC
Confidence 999999999999999 98864
No 5
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.82 E-value=1.8e-18 Score=163.98 Aligned_cols=226 Identities=24% Similarity=0.363 Sum_probs=141.5
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
|||+|+||+++ .||+||++.+++++|.+. +++|.++|...+ ......+..+. +.. +... +.+.++.
T Consensus 1 mkIl~~~~~~~-~gG~e~~~~~la~~L~~~--G~~V~v~~~~~~--~~~~~~~~~~~-~~~------i~~~--~~~~~~~ 66 (392)
T cd03805 1 LRVAFIHPDLG-IGGAERLVVDAALALQSR--GHEVTIYTSHHD--PSHCFEETKDG-TLP------VRVR--GDWLPRS 66 (392)
T ss_pred CeEEEECCCCC-CchHHHHHHHHHHHHHhC--CCeEEEEcCCCC--chhcchhccCC-eeE------EEEE--eEEEcch
Confidence 68999999996 699999999999999887 578888886432 11111111100 011 1111 1122222
Q ss_pred cCCchhHHHHHHHHHHHHHH--HHhccCCcEEEeCCCccccccccc-ccCCeEEEEeecCCcchHHhhhhhcccccccch
Q 022349 115 TYPRFTMIGQSFGSVYLSWE--ALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~--~l~~~~pDv~i~s~~~~~~~p~~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~ 191 (298)
...++..++..+.....++. ..+..++|+++... .....++.. ..+.|++.++|+|. .. ++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~-~~~~~~~~~~~~~~~~i~~~h~~~------~~-~~~------- 131 (392)
T cd03805 67 IFGRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQ-VSACVPLLKLFSPSKILFYCHFPD------QL-LAQ------- 131 (392)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcC-cchHHHHHHHhcCCcEEEEEecCh------HH-hcC-------
Confidence 22333333333333222222 23456899877432 222233322 23478999999987 11 110
Q ss_pred hhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCC-ceEEcCCCCCCcccccCCC-----
Q 022349 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDR-IKRVYPPCDTSGLQVLPLE----- 264 (298)
Q Consensus 192 ~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~-~~VIYPPvd~~~~~~~~~~----- 264 (298)
. .+..+.++..++.++.++..+.+|.|+++|+++++.+.+.++. +.+ ..||||++|.+.+...+..
T Consensus 132 ----~---~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~~ 204 (392)
T cd03805 132 ----R---GSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPGL 204 (392)
T ss_pred ----C---CcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccccccc
Confidence 0 1233456666777778899999999999999999999998874 233 3599999998877532111
Q ss_pred --CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 --RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 --~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...+..+++++||+.++||++.+|+ |+.++.+
T Consensus 205 ~~~~~~~~~i~~~grl~~~Kg~~~ll~-a~~~l~~ 238 (392)
T cd03805 205 LIPKSGKKTFLSINRFERKKNIALAIE-AFAILKD 238 (392)
T ss_pred cccCCCceEEEEEeeecccCChHHHHH-HHHHHHh
Confidence 1122468899999999999999999 9988753
No 6
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.54 E-value=2.3e-14 Score=119.55 Aligned_cols=176 Identities=18% Similarity=0.124 Sum_probs=90.6
Q ss_pred EEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccC
Q 022349 37 VAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTY 116 (298)
Q Consensus 37 Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~ 116 (298)
|.+++.++...||+|+++.+++++|++. |+++.+++...+... ... ..... .. ...
T Consensus 1 ili~~~~~~~~GG~e~~~~~l~~~l~~~--G~~v~v~~~~~~~~~---~~~----~~~~~------~~---~~~------ 56 (177)
T PF13439_consen 1 ILITNIFLPNIGGAERVVLNLARALAKR--GHEVTVVSPGVKDPI---EEE----LVKIF------VK---IPY------ 56 (177)
T ss_dssp -EEECC-TTSSSHHHHHHHHHHHHHHHT--T-EEEEEESS-TTS----SST----EEEE------------TT-------
T ss_pred CEEEEecCCCCChHHHHHHHHHHHHHHC--CCEEEEEEcCCCccc---hhh----cccee------ee---eec------
Confidence 5678888889999999999999999996 677788875431110 000 00000 00 000
Q ss_pred CchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhh
Q 022349 117 PRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQ 196 (298)
Q Consensus 117 ~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~ 196 (298)
.........+.......+.+++.+||+++...............+.|.++.+|.+..... .+...
T Consensus 57 ~~~~~~~~~~~~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~~v~~~H~~~~~~~----~~~~~----------- 121 (177)
T PF13439_consen 57 PIRKRFLRSFFFMRRLRRLIKKEKPDIVHIHGPPAFWIALLACRKVPIVYTIHGPYFERR----FLKSK----------- 121 (177)
T ss_dssp SSTSS--HHHHHHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHHCSCEEEEE-HHH--HH----TTTTS-----------
T ss_pred ccccccchhHHHHHHHHHHHHHcCCCeEEecccchhHHHHHhccCCCEEEEeCCCccccc----ccccc-----------
Confidence 000011111212222344567789999964432222222111127899999998662110 01000
Q ss_pred chhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCccc
Q 022349 197 SNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQ 259 (298)
Q Consensus 197 ~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~ 259 (298)
.+....+ .........+.+|.++|||+++++.+.+ +|+ +.++.|||++||++.|.
T Consensus 122 ---~~~~~~~----~~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 122 ---LSPYSYL----NFRIERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ---CCCHHHH----HHCTTHHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred ---cchhhhh----hhhhhhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence 0011111 1122344578999999999999999999 997 67899999999999873
No 7
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.48 E-value=3.1e-12 Score=122.46 Aligned_cols=223 Identities=19% Similarity=0.166 Sum_probs=127.4
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||.|+|+.+- |- ...++++|.+. +++|.++|...+... .. +.+ ++.+..........
T Consensus 1 ~il~~~~~~p--~~----~~~la~~L~~~--G~~v~~~~~~~~~~~-------~~--~v~------~~~~~~~~~~~~~~ 57 (396)
T cd03818 1 RILFVHQNFP--GQ----FRHLAPALAAQ--GHEVVFLTEPNAAPP-------PG--GVR------VVRYRPPRGPTSGT 57 (396)
T ss_pred CEEEECCCCc--hh----HHHHHHHHHHC--CCEEEEEecCCCCCC-------CC--Cee------EEEecCCCCCCCCC
Confidence 5889999993 44 34578999887 788888886542111 10 122 22221110000011
Q ss_pred CCchhHHHHHHH---HHHHHHHHH--hccCCcEEEeCCCccccccccc-ccCCeEEEEeecCCcchHHhhhhhccccccc
Q 022349 116 YPRFTMIGQSFG---SVYLSWEAL--CKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (298)
Q Consensus 116 ~~~~~l~~~~l~---~~~~a~~~l--~~~~pDv~i~s~~~~~~~p~~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~ 189 (298)
++........+. .+......+ +..+||+++...++..+..++. ++++|.|.|+|+.... +.....++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~~~~~~~-------~~~~~~~~ 130 (396)
T cd03818 58 HPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAPLIGYFEFYYRA-------EGADVGFD 130 (396)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCCEEEEEeeeecC-------CCCCCCCC
Confidence 111111111111 111112222 3457999998877665555543 4678999999975511 11000111
Q ss_pred chhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCC----
Q 022349 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER---- 265 (298)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~---- 265 (298)
.. .. .........+..........+.+|.+|++|+++++.+.+.++ .++.|||++||++.+...+...
T Consensus 131 ~~--~~----~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~--~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 131 PE--FP----PSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR--SRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred CC--CC----CchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc--cceEEeCCCccccccCCCchhhhccc
Confidence 10 00 000000001111112446678999999999999999999886 7899999999998886321100
Q ss_pred -----CCCCcEEEEEcC-CCCccChHHHHHHHHHhhhh
Q 022349 266 -----STEYPAIISVAQ-FRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 266 -----~~~~~~iLsvgR-l~p~Kn~~l~I~~Afa~~~~ 297 (298)
..++..++++|| ++++|+++.+|+ |++.+.+
T Consensus 203 ~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~-a~~~l~~ 239 (396)
T cd03818 203 NGRVLTPGDEVITFVARNLEPYRGFHVFMR-ALPRLLR 239 (396)
T ss_pred ccccCCCCCeEEEEECCCcccccCHHHHHH-HHHHHHH
Confidence 012457899998 999999999999 9987653
No 8
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.45 E-value=1.4e-11 Score=126.12 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=59.3
Q ss_pred CCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC--------CC--CCCCcEEEEEcCCCCccChHHHHH
Q 022349 221 CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL--------ER--STEYPAIISVAQFRPEKVRYKLIS 289 (298)
Q Consensus 221 ~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~--------~~--~~~~~~iLsvgRl~p~Kn~~l~I~ 289 (298)
..+.+++||.++++.+.+.+|. +.++.|||++||.+.+...+. .. ..+..+++++||++|+|+++.+|+
T Consensus 458 ~~~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~ 537 (694)
T PRK15179 458 RGVALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE 537 (694)
T ss_pred CCeEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence 5689999999999999988886 567999999999877642110 00 111347889999999999999999
Q ss_pred HHHHhhhh
Q 022349 290 TRYYSYLD 297 (298)
Q Consensus 290 ~Afa~~~~ 297 (298)
||+++++
T Consensus 538 -A~a~l~~ 544 (694)
T PRK15179 538 -AAQRFAA 544 (694)
T ss_pred -HHHHHHH
Confidence 9987753
No 9
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.44 E-value=6.6e-12 Score=116.81 Aligned_cols=208 Identities=14% Similarity=0.053 Sum_probs=122.0
Q ss_pred EEEEEcCC--CCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeec
Q 022349 36 SVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (298)
Q Consensus 36 ~Va~~Hp~--l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~ 113 (298)
||||++.. ....||+|+++.+++++|++.+ +++.+.+........ .....++ +++.+....
T Consensus 1 ~i~~i~~~~~~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~-----~~~~~~i------~~~~~~~~~---- 63 (363)
T cd04955 1 KIAIIGTRGIPAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK-----ETEYNGV------RLIHIPAPE---- 63 (363)
T ss_pred CeEEEecCcCCcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc-----ccccCCc------eEEEcCCCC----
Confidence 58888663 4567999999999999999874 666676654311110 0011122 222221100
Q ss_pred ccCCchhHHHHHHHHHHHHHHHH-hccCCcEEEeCCCccccccc---ccccCCeEEEEeecCCcchHHhhhhhccccccc
Q 022349 114 STYPRFTMIGQSFGSVYLSWEAL-CKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (298)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~a~~~l-~~~~pDv~i~s~~~~~~~p~---~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~ 189 (298)
........+. +...++.+ .+.++|++++.... ..+. .+..+.|++..+|....... .+
T Consensus 64 -~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~~~----------~~- 125 (363)
T cd04955 64 -IGGLGTIIYD----ILAILHALFVKRDIDHVHALGPA--IAPFLPLLRLKGKKVVVNMDGLEWKRA----------KW- 125 (363)
T ss_pred -ccchhhhHHH----HHHHHHHHhccCCeEEEEecCcc--HHHHHHHHHhcCCCEEEEccCcceeec----------cc-
Confidence 0010011111 11112222 34567777765322 1222 22247889988886441100 00
Q ss_pred chhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccc-c----CCC
Q 022349 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV-L----PLE 264 (298)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~-~----~~~ 264 (298)
+...++++....+.+.+.+|.|+++|+++++.+++.|| .+..+|++++|.+.+.. . ...
T Consensus 126 --------------~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~--~~~~~i~ngv~~~~~~~~~~~~~~~~ 189 (363)
T cd04955 126 --------------GRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKEKYG--RDSTYIPYGADHVVSSEEDEILKKYG 189 (363)
T ss_pred --------------ccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHHhcC--CCCeeeCCCcChhhcchhhhhHHhcC
Confidence 01112233344566788999999999999999998898 45599999999876542 0 011
Q ss_pred CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 265 RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
. .++++++++||+.++||++.+++ |++.+.
T Consensus 190 ~-~~~~~i~~~G~~~~~Kg~~~li~-a~~~l~ 219 (363)
T cd04955 190 L-EPGRYYLLVGRIVPENNIDDLIE-AFSKSN 219 (363)
T ss_pred C-CCCcEEEEEecccccCCHHHHHH-HHHhhc
Confidence 1 12468999999999999999999 998764
No 10
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.44 E-value=5e-12 Score=116.74 Aligned_cols=213 Identities=15% Similarity=0.064 Sum_probs=126.7
Q ss_pred EEEEEcCCCCC--CChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeec
Q 022349 36 SVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (298)
Q Consensus 36 ~Va~~Hp~l~~--~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~ 113 (298)
||+|+..++.. .||+|+++.+++++|++.+.. +.+++...+.... .... ...... ... .
T Consensus 1 ~ili~~~~~~~~~~gG~~~~~~~l~~~L~~~~~~--v~~~~~~~~~~~~---~~~~---~~~~~~---~~~-----~--- 61 (365)
T cd03809 1 RILIDARFLASRRPTGIGRYARELLRALLKLDPE--EVLLLLPGAPGLL---LLPL---RAALRL---LLR-----L--- 61 (365)
T ss_pred CEEEechhhhcCCCCcHHHHHHHHHHHHHhcCCc--eEEEEecCccccc---cccc---hhcccc---ccc-----c---
Confidence 58888888865 899999999999999997544 4454433211110 0000 000000 000 0
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhcccccccchhh
Q 022349 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (298)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~ 193 (298)
.........+.............++|+++......... +..+.|.+..+|.... +. +..
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~---~~~~~~~i~~~hd~~~--------~~----~~~--- 120 (365)
T cd03809 62 ---PRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPHNTAPLL---RLRGVPVVVTIHDLIP--------LR----FPE--- 120 (365)
T ss_pred ---ccccccchhhHHHHHHHHHhhhcCCCeeeecccccCcc---cCCCCCEEEEeccchh--------hh----Ccc---
Confidence 00000111111111112234457899888664432111 3347889999995430 00 000
Q ss_pred hhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC------CCC
Q 022349 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL------ERS 266 (298)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~------~~~ 266 (298)
... ......+....+...+.+|.+++.|+++++.+.+.++. +.++.|+++++|.+.+..... ...
T Consensus 121 -----~~~---~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
T cd03809 121 -----YFS---PGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYL 192 (365)
T ss_pred -----cCC---HHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHHHHHHhcC
Confidence 000 11223334446777889999999999999999999974 567899999999887753210 111
Q ss_pred CCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 267 TEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 267 ~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.++..++++||+.++|+++.+++ |+..+.+
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~~l~-~~~~~~~ 222 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLERLLE-AFARLPA 222 (365)
T ss_pred CCCCeEEEeCCCccccCHHHHHH-HHHHHHH
Confidence 22578999999999999999999 9987754
No 11
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.41 E-value=2.2e-13 Score=132.50 Aligned_cols=233 Identities=20% Similarity=0.227 Sum_probs=144.2
Q ss_pred CCcEEEEEcCCCCCCChHHHHHHHHHHHHHH-------hCCCCeEEEEccCCCCChhH-HHHhhccccceeecCCCeEEE
Q 022349 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQE-------ESPDLDCIVYTGDHDAFPDS-LLARAVDRFGVELLHPPKVVH 104 (298)
Q Consensus 33 ~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~-------~~~~~~v~iyT~~~~~~~~~-~~~~~~~~f~~~l~~~~~~i~ 104 (298)
.+.++.|.||+++ +||+||-..+.+.+++. .+.+.+|+++|.+.+..... +........++.. ++.++
T Consensus 33 ~~~~~~~~~~~~~-~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~--~i~vv- 108 (495)
T KOG0853|consen 33 PFEHVTFIHPDLG-IGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTP--PILVV- 108 (495)
T ss_pred cchhheeeccccc-cCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCC--ceEEE-
Confidence 3458999999995 79999999998888888 12367778888765432111 1111111112111 11111
Q ss_pred ccccceeeccc--CCchhHHHHHHH--HHHH--HHHHHhccCCc-EEEeCCCccccccccc-cc----CCeEEEEeecCC
Q 022349 105 LYRRKWIEEST--YPRFTMIGQSFG--SVYL--SWEALCKFTPL-YYFDTSGYAFTYPLAR-IF----GCRVICYTHYPT 172 (298)
Q Consensus 105 l~~~~~~~~~~--~~~~~l~~~~l~--~~~~--a~~~l~~~~pD-v~i~s~~~~~~~p~~~-~~----~~~~i~Y~H~P~ 172 (298)
+.++++.. +......++..- ..++ .+... .+.| ++.|+. ..+.|+.. +. .+.+.+|||+|+
T Consensus 109 ---~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~--~~~~~l~~~~~~p~~~~~i~~~~h~~~ 181 (495)
T KOG0853|consen 109 ---GDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFV--SACVPLLKQLSGPDVIIKIYFYCHFPD 181 (495)
T ss_pred ---EeecCcccchhhhhhhccceeEEEEeccchhhhhh--hhhceeecchH--HHHHHHHHHhcCCcccceeEEeccchH
Confidence 22333322 111111111110 0000 01111 3467 444554 34566543 33 477899999999
Q ss_pred cchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC--CCCceEEc
Q 022349 173 ISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVY 250 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~--~~~~~VIY 250 (298)
+.+.++ .+..+.+|+..+.+...-....+|++++||.+|+.+++..+-. ..++.++|
T Consensus 182 ------~lla~r---------------~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y 240 (495)
T KOG0853|consen 182 ------SLLAKR---------------LGVLKVLYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTY 240 (495)
T ss_pred ------HHhccc---------------cCccceeehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceee
Confidence 433221 2345678888888888888999999999999999999999874 45699999
Q ss_pred CCCCCCcccc------c----CCCC----CCCCcEEEEEcCCCCccChHHHHHHHHHhhhhC
Q 022349 251 PPCDTSGLQV------L----PLER----STEYPAIISVAQFRPEKVRYKLISTRYYSYLDS 298 (298)
Q Consensus 251 PPvd~~~~~~------~----~~~~----~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~~ 298 (298)
|+||.+.+.. . +... ...+-++.+++|++|.||++++++ ||.+.+++
T Consensus 241 ~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~-a~~~~~~~ 301 (495)
T KOG0853|consen 241 PEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALP-AFTLLHDS 301 (495)
T ss_pred ccccchhccccccccchhcccccceeeeecccceEeeeeeecCCCCCceeehh-hHHhhhcc
Confidence 9999776541 1 1100 111457889999999999999999 99987653
No 12
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.40 E-value=1.3e-11 Score=118.29 Aligned_cols=213 Identities=13% Similarity=0.106 Sum_probs=120.7
Q ss_pred EEEEEcC-CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 36 SVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 36 ~Va~~Hp-~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
||+++-+ +....||+|+.+.+++++|.+. ++++.|+|+..+.... .+.. .-+.. +..+....+.
T Consensus 1 kI~~v~~~~~p~~GG~e~~~~~la~~L~~~--G~~V~v~~~~~~~~~~---~~~~-~~~i~------v~~~p~~~~~--- 65 (398)
T cd03796 1 RICMVSDFFYPNLGGVETHIYQLSQCLIKR--GHKVVVITHAYGNRVG---IRYL-TNGLK------VYYLPFVVFY--- 65 (398)
T ss_pred CeeEEeeccccccccHHHHHHHHHHHHHHc--CCeeEEEeccCCcCCC---cccc-cCcee------EEEecceecc---
Confidence 4555544 3335699999999999999987 5778888864311100 0000 00111 2221110000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc----cccccCCeEEEEeecCCcchHHhhhhhcccccccc
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP----LARIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p----~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~ 190 (298)
....+...+.......+.+++.+||+++-........+ .++..+.|.|.-.|... . ...
T Consensus 66 ---~~~~~~~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~-~-------------~~~ 128 (398)
T cd03796 66 ---NQSTLPTFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLF-G-------------FAD 128 (398)
T ss_pred ---CCccccchhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccc-c-------------ccc
Confidence 00001111111122223456778999986643322111 12234678877677532 0 000
Q ss_pred hhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCC
Q 022349 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (298)
Q Consensus 191 ~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~ 269 (298)
. .... .....++..+++|.+++.|+...+.+....+. +.++.|||+.+|.+.+...+.....+.
T Consensus 129 ---------~---~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~~~~~~ 193 (398)
T cd03796 129 ---------A---SSIH---TNKLLRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSKRDNDK 193 (398)
T ss_pred ---------h---hhHH---hhHHHHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcccCCCCc
Confidence 0 0000 11224556789999999999999876555554 467899999999887753211111224
Q ss_pred cEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 270 PAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 270 ~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
..++++||+.++||++.+|+ |+..+.
T Consensus 194 ~~i~~~grl~~~Kg~~~li~-a~~~l~ 219 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVG-IIPEIC 219 (398)
T ss_pred eEEEEEeccchhcCHHHHHH-HHHHHH
Confidence 68999999999999999999 988764
No 13
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.38 E-value=3.3e-11 Score=111.92 Aligned_cols=195 Identities=16% Similarity=0.103 Sum_probs=120.2
Q ss_pred EcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCch
Q 022349 40 FHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRF 119 (298)
Q Consensus 40 ~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~ 119 (298)
++|.++ .||+|+++.+++++|++. ++++.+++.... .. ...+ ..+++ ++.+... ....+
T Consensus 3 ~~~~~~-~gG~e~~~~~l~~~L~~~--g~~v~v~~~~~~-~~----~~~~-~~~~~------~~~~~~~------~~~~~ 61 (355)
T cd03819 3 VLPALE-SGGVERGTLELARALVER--GHRSLVASAGGR-LV----AELE-AEGSR------HIKLPFI------SKNPL 61 (355)
T ss_pred cchhhc-cCcHHHHHHHHHHHHHHc--CCEEEEEcCCCc-hH----HHHH-hcCCe------EEEcccc------ccchh
Confidence 458885 699999999999999986 577777765321 11 1111 11222 1111100 00001
Q ss_pred hHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc--ccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhc
Q 022349 120 TMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQS 197 (298)
Q Consensus 120 ~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~--~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~ 197 (298)
..++ ......+.+++.+||+++..+........ ....+.|.+..+|....
T Consensus 62 ~~~~----~~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------------------ 113 (355)
T cd03819 62 RILL----NVARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYS------------------------ 113 (355)
T ss_pred hhHH----HHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchh------------------------
Confidence 1111 11122334667889988865432211111 12347888888886330
Q ss_pred hhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC------------
Q 022349 198 NWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE------------ 264 (298)
Q Consensus 198 ~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~------------ 264 (298)
. .. .+....+.+|.++++|+++++.+++.++. +.++.|+++++|.+.+......
T Consensus 114 --~---~~--------~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~ 180 (355)
T cd03819 114 --V---NF--------RYNAIMARGDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWP 180 (355)
T ss_pred --h---HH--------HHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcC
Confidence 0 00 12233467999999999999999988886 5678999999998877532110
Q ss_pred CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...+...++++||+.++|+++.+++ |++.+++
T Consensus 181 ~~~~~~~i~~~Gr~~~~Kg~~~li~-~~~~l~~ 212 (355)
T cd03819 181 LPKGKPVILLPGRLTRWKGQEVFIE-ALARLKK 212 (355)
T ss_pred CCCCceEEEEeeccccccCHHHHHH-HHHHHHh
Confidence 0122467999999999999999999 9988764
No 14
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.36 E-value=4.3e-11 Score=108.56 Aligned_cols=201 Identities=17% Similarity=0.150 Sum_probs=121.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||+|+.+++...||+|+++.+++++|++. ++++.+++..... . ..+ .....+.+..+.....
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~-~--------~~~--~~~~~~~~~~~~~~~~----- 62 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEK--GHEVTIISLDKGE-P--------PFY--ELDPKIKVIDLGDKRD----- 62 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhC--CCeEEEEecCCCC-C--------Ccc--ccCCccceeecccccc-----
Confidence 68999999976899999999999999875 5777777654311 0 000 1111111222111000
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc-cc-ccC-CeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-AR-IFG-CRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~-~~-~~~-~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
. .....+.......+.++..+||+++...+. ...+ +. ..+ .|++..+|..... .
T Consensus 63 -~---~~~~~~~~~~~~~~~l~~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~------~----------- 119 (348)
T cd03820 63 -S---KLLARFKKLRRLRKLLKNNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEHNSPDA------Y----------- 119 (348)
T ss_pred -c---chhccccchHHHHHhhcccCCCEEEEcCch--HHHHHHHHhhccccEEEecCCCccc------h-----------
Confidence 0 000000011112334566889988866543 1111 11 224 4888989876510 0
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCcEE
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAI 272 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~i 272 (298)
... . .+.. ..+...+.+|.+++.|++.+....... +.++.|+++|++.+.+... ...++..+
T Consensus 120 -------~~~-~--~~~~---~~~~~~~~~d~ii~~s~~~~~~~~~~~--~~~~~vi~~~~~~~~~~~~---~~~~~~~i 181 (348)
T cd03820 120 -------KKR-L--RRLL---LRRLLYRRADAVVVLTEEDRALYYKKF--NKNVVVIPNPLPFPPEEPS---SDLKSKRI 181 (348)
T ss_pred -------hhh-h--HHHH---HHHHHHhcCCEEEEeCHHHHHHhhccC--CCCeEEecCCcChhhcccc---CCCCCcEE
Confidence 000 0 0000 356678899999999999983333333 4789999999998766521 11236799
Q ss_pred EEEcCCCCccChHHHHHHHHHhhh
Q 022349 273 ISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 273 LsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
+++||+.++|+++.+++ |+.++.
T Consensus 182 ~~~g~~~~~K~~~~l~~-~~~~l~ 204 (348)
T cd03820 182 LAVGRLVPQKGFDLLIE-AWAKIA 204 (348)
T ss_pred EEEEeeccccCHHHHHH-HHHHHH
Confidence 99999999999999999 998875
No 15
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.36 E-value=2.1e-11 Score=110.64 Aligned_cols=208 Identities=21% Similarity=0.222 Sum_probs=125.8
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||+|+++... .||+++++.+++++|.+. ++++.+++...+..... .... ... ...... ...
T Consensus 1 kIl~~~~~~~-~gG~~~~~~~l~~~l~~~--g~~v~v~~~~~~~~~~~---~~~~--~~~---~~~~~~-----~~~--- 61 (353)
T cd03811 1 KILFVIPSLG-GGGAERVLLNLANGLDKR--GYDVTLVVLRDEGDYLE---LLPS--NVK---LIPVRV-----LKL--- 61 (353)
T ss_pred CeEEEeeccc-CCCcchhHHHHHHHHHhc--CceEEEEEcCCCCcccc---cccc--chh---hhceee-----eec---
Confidence 6899999996 799999999999999776 56667766543111100 0000 000 000000 000
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCC-ccccccc-ccccCCeEEEEeecCCcchHHhhhhhcccccccchhh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSG-YAFTYPL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNAS 193 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~-~~~~~p~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~ 193 (298)
.. .. .+. ......+.++..+||+++.... ....... ....+.|.+.++|.... .. . .
T Consensus 62 ~~-~~-~~~---~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~-----~------~---- 120 (353)
T cd03811 62 KS-LR-DLL---AILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHNSLS-LE-----L------K---- 120 (353)
T ss_pred cc-cc-chh---HHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCceEEEEcCcch-hh-----h------c----
Confidence 00 00 000 1111123356678998886643 1211111 11125799999998661 00 0 0
Q ss_pred hhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC-----CCC
Q 022349 194 IAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-----RST 267 (298)
Q Consensus 194 ~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~-----~~~ 267 (298)
...... .......+.+|.+++.|++.++.+.+.++. ..++.|+++|+|.+.+...... ...
T Consensus 121 --------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 187 (353)
T cd03811 121 --------RKLRLL-----LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLELGIPP 187 (353)
T ss_pred --------cchhHH-----HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhhhcCCCC
Confidence 000000 335677889999999999999999999985 5689999999998877532111 112
Q ss_pred CCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 268 EYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 268 ~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
+...++++||+.+.|+++.+++ |+..+.+
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~-~~~~l~~ 216 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIR-AFALLRK 216 (353)
T ss_pred CceEEEEEecchhhcChHHHHH-HHHHhhh
Confidence 3578999999999999999999 9887653
No 16
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.34 E-value=3.5e-11 Score=112.69 Aligned_cols=210 Identities=15% Similarity=0.070 Sum_probs=121.4
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
|||+++++- ..||+|+++.+++++|.+.+ ++|.++|...+.... .... +.. +...+.... +..
T Consensus 1 mki~~~~~p--~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~~~~~~---~~~~---~~~------~~~~~~~~~-~~~ 63 (371)
T cd04962 1 MKIGIVCYP--TYGGSGVVATELGKALARRG--HEVHFITSSRPFRLD---EYSP---NIF------FHEVEVPQY-PLF 63 (371)
T ss_pred CceeEEEEe--CCCCccchHHHHHHHHHhcC--CceEEEecCCCcchh---hhcc---CeE------EEEeccccc-chh
Confidence 578888743 46999999999999999985 556777754321110 0000 111 111100000 000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--cc-cc---cCCeEEEEeecCCcchHHhhhhhcccccc
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA-RI---FGCRVICYTHYPTISLDMISRVREGSSMY 188 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~~-~~---~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y 188 (298)
..+. +. +.......+.+++.+||+++.........+ ++ +. .+.|.+..+|..... ..
T Consensus 64 ~~~~----~~-~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------~~------ 126 (371)
T cd04962 64 QYPP----YD-LALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT------LV------ 126 (371)
T ss_pred hcch----hH-HHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc------cc------
Confidence 0010 11 111122234466789998885433222222 11 11 167888888864410 00
Q ss_pred cchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC----
Q 022349 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---- 264 (298)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~---- 264 (298)
.. ... +..+.+...+++|.+++.|++.++.+.+.++...++.|+++++|.+.+...+..
T Consensus 127 ~~-------------~~~----~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~ 189 (371)
T cd04962 127 GQ-------------DPS----FQPATRFSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKR 189 (371)
T ss_pred cc-------------ccc----chHHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHH
Confidence 00 000 111244567889999999999999999887545678999999987765421100
Q ss_pred ---CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 265 ---RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 265 ---~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
...++..++++||+.++|+++.+|+ |+.++.
T Consensus 190 ~~~~~~~~~~il~~g~l~~~K~~~~li~-a~~~l~ 223 (371)
T cd04962 190 RLGAPEGEKVLIHISNFRPVKRIDDVIR-IFAKVR 223 (371)
T ss_pred hcCCCCCCeEEEEecccccccCHHHHHH-HHHHHH
Confidence 0112467889999999999999999 998764
No 17
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.33 E-value=1e-10 Score=112.51 Aligned_cols=235 Identities=9% Similarity=-0.070 Sum_probs=127.7
Q ss_pred cEEEEEcC-CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhcc-ccceeecCCCeEEEccccceee
Q 022349 35 TSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVD-RFGVELLHPPKVVHLYRRKWIE 112 (298)
Q Consensus 35 ~~Va~~Hp-~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~-~f~~~l~~~~~~i~l~~~~~~~ 112 (298)
|||+++.. +.-..||+|+.+.+++++|.+. ++++.|+|+..........+...+ .+..+....+++..+.. +.+
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~--G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~--~~~ 76 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAAR--GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPL--YVP 76 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccc--cCC
Confidence 68898875 4445689999999999999997 577788886421100000000000 00001112222332211 110
Q ss_pred cccCCchhHHHHHHHHHHHHHHHH-h--ccCCcEEEeCCCccccccc----ccccCCeEEEEeecCCcchHHhhhhhccc
Q 022349 113 ESTYPRFTMIGQSFGSVYLSWEAL-C--KFTPLYYFDTSGYAFTYPL----ARIFGCRVICYTHYPTISLDMISRVREGS 185 (298)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~a~~~l-~--~~~pDv~i~s~~~~~~~p~----~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~ 185 (298)
. .......+.........++..+ + ..+||+++.+....+..+. ++..+.|.++.+|.-. .+. ..+.+
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~--~~~---~~~~~ 150 (412)
T PRK10307 77 K-QPSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYE--VDA---AFGLG 150 (412)
T ss_pred C-CccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCC--HHH---HHHhC
Confidence 0 0001111111111111112221 1 2679998865433332232 2334677777666311 110 01000
Q ss_pred ccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC
Q 022349 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE 264 (298)
Q Consensus 186 ~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~ 264 (298)
. .. +..+.+++..+.+++.+.+|.|++.|+.+++.+++. +. +.++.|||+++|.+.+...+..
T Consensus 151 --~----------~~---~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~ 214 (412)
T PRK10307 151 --L----------LK---GGKVARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADA 214 (412)
T ss_pred --C----------cc---CcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCcc
Confidence 0 00 112233444557778889999999999999999875 54 5678999999998877532110
Q ss_pred ----------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 265 ----------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 265 ----------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
...+...++++||+.++|+++.+|+ |++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~-a~~~l~ 255 (412)
T PRK10307 215 DVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVID-AARRLR 255 (412)
T ss_pred chHHHHHHcCCCCCCEEEEEcCccccccCHHHHHH-HHHHhc
Confidence 0111357999999999999999999 998764
No 18
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.33 E-value=7.8e-11 Score=111.32 Aligned_cols=209 Identities=14% Similarity=0.134 Sum_probs=118.3
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeec
Q 022349 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEE 113 (298)
Q Consensus 34 ~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~ 113 (298)
+.+|..+.+.++ .||+|+++.+++++|.+.+ +++.+.+... . +.+.+++.. .++ +++.+...
T Consensus 1 ~~~il~ii~~~~-~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~-~--~~~~~~~~~-~~i------~~~~~~~~----- 62 (374)
T TIGR03088 1 RPLIVHVVYRFD-VGGLENGLVNLINHLPADR--YRHAVVALTE-V--SAFRKRIQR-PDV------AFYALHKQ----- 62 (374)
T ss_pred CceEEEEeCCCC-CCcHHHHHHHHHhhccccc--cceEEEEcCC-C--ChhHHHHHh-cCc------eEEEeCCC-----
Confidence 468999999995 6999999999999998764 4434444221 1 112122211 122 23332211
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc-ccccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 114 STYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 114 ~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
....+.. +....+.+++.+||+++.....+....+ ++..+.+.. +|... . ++ .++.
T Consensus 63 -~~~~~~~-------~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~--i~~~h-~-------~~---~~~~-- 119 (374)
T TIGR03088 63 -PGKDVAV-------YPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPAR--IHGEH-G-------RD---VFDL-- 119 (374)
T ss_pred -CCCChHH-------HHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeE--EEeec-C-------cc---cccc--
Confidence 0011111 1112334667889999864321111111 222344432 34322 0 00 0000
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCC------
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER------ 265 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~------ 265 (298)
.+ +.+.+. ++.+...+.+|.+++.|+.+++.+.+.++. +.++.|||+++|.+.+...+...
T Consensus 120 -------~~--~~~~~~---~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~ 187 (374)
T TIGR03088 120 -------DG--SNWKYR---WLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPP 187 (374)
T ss_pred -------hh--hHHHHH---HHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHh
Confidence 00 011111 112334566899999999999999998886 56789999999988775211000
Q ss_pred ---CCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 266 ---STEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 266 ---~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
..+...++++||+.++|+++.+|+ |++.+.
T Consensus 188 ~~~~~~~~~i~~vGrl~~~Kg~~~li~-a~~~l~ 220 (374)
T TIGR03088 188 DFFADESVVVGTVGRLQAVKDQPTLVR-AFALLV 220 (374)
T ss_pred hcCCCCCeEEEEEecCCcccCHHHHHH-HHHHHH
Confidence 112458889999999999999999 998765
No 19
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.33 E-value=4.4e-11 Score=114.29 Aligned_cols=221 Identities=13% Similarity=0.082 Sum_probs=121.0
Q ss_pred EEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCc
Q 022349 39 FFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPR 118 (298)
Q Consensus 39 ~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~ 118 (298)
.+||..+..||+|+++.+++++|.+. +++|.++|+... ... .... .+...+++..+....... ...
T Consensus 11 ~~~~~~~~~GG~e~~v~~la~~L~~~--G~~V~v~~~~~~-~~~---~~~~-----~~~~~~~v~~~~~~~~~~---~~~ 76 (405)
T TIGR03449 11 LQQPGTGDAGGMNVYILETATELARR--GIEVDIFTRATR-PSQ---PPVV-----EVAPGVRVRNVVAGPYEG---LDK 76 (405)
T ss_pred cccCCCcCCCCceehHHHHHHHHhhC--CCEEEEEecccC-CCC---CCcc-----ccCCCcEEEEecCCCccc---CCH
Confidence 35666766799999999999999997 577788885421 000 0000 011122233221110000 001
Q ss_pred hhHHHHHHHHHH-HHHHH-Hh--ccCCcEEEeCCCccccccc--ccccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 119 FTMIGQSFGSVY-LSWEA-LC--KFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 119 ~~l~~~~l~~~~-~a~~~-l~--~~~pDv~i~s~~~~~~~p~--~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
..+.. .+..+. ..++. ++ ..+||+++.........+. ++..+.|.|.-+|... ... ..+.+..
T Consensus 77 ~~~~~-~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~-~~~-~~~~~~~-------- 145 (405)
T TIGR03449 77 EDLPT-QLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLA-AVK-NAALADG-------- 145 (405)
T ss_pred HHHHH-HHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchH-HHH-HHhccCC--------
Confidence 11111 110000 11212 22 2469999854321211111 2234678888788532 000 0000000
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC-------C
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-------E 264 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~-------~ 264 (298)
......+.+ ...+...+.+|.++++|+.+++.+.+.+|. +.++.||++++|.+.+...+. .
T Consensus 146 --------~~~~~~~~~---~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~ 214 (405)
T TIGR03449 146 --------DTPEPEARR---IGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERARLG 214 (405)
T ss_pred --------CCCchHHHH---HHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHHHHHHhcC
Confidence 000011111 124556788999999999999999998885 457889999999887752110 0
Q ss_pred CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 265 RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
-..++.+++++||+.++|+++.+|+ |+.+++
T Consensus 215 ~~~~~~~i~~~G~l~~~K~~~~li~-a~~~l~ 245 (405)
T TIGR03449 215 LPLDTKVVAFVGRIQPLKAPDVLLR-AVAELL 245 (405)
T ss_pred CCCCCcEEEEecCCCcccCHHHHHH-HHHHHH
Confidence 0112478999999999999999999 998764
No 20
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.32 E-value=3.6e-11 Score=111.74 Aligned_cols=208 Identities=15% Similarity=0.069 Sum_probs=121.3
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||+++++++ ..||+|+.+.+++++|.+. ++++.+++...... ....... ..+.. +..+.
T Consensus 1 kIl~~~~~~-~~GG~~~~~~~l~~~L~~~--~~~v~~i~~~~~~~--~~~~~~~-~~~~~------~~~~~--------- 59 (358)
T cd03812 1 KILHIVGTM-NRGGIETFIMNYYRNLDRS--KIQFDFLVTSKEEG--DYDDEIE-KLGGK------IYYIP--------- 59 (358)
T ss_pred CEEEEeCCC-CCccHHHHHHHHHHhcCcc--ceEEEEEEeCCCCc--chHHHHH-HcCCe------EEEec---------
Confidence 689999999 6899999999999999765 57777777543211 1111111 11211 11111
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc--ccccCCeE-EEEeecCCcchHHhhhhhcccccccchh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRV-ICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~--~~~~~~~~-i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
+.....++.+. ...+.+++.+||+++.........+. +...+.+. +...|....... .
T Consensus 60 -~~~~~~~~~~~---~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------~----- 120 (358)
T cd03812 60 -ARKKNPLKYFK---KLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHD----------K----- 120 (358)
T ss_pred -CCCccHHHHHH---HHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccc----------c-----
Confidence 00111111111 11233567889988865432211121 12223444 555665441000 0
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC--------C
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL--------E 264 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~--------~ 264 (298)
.. +...+ ..+.....+.+|.+++.|+..++.+.+... +.++.|||++||.+.+...+. .
T Consensus 121 -------~~--~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~ 187 (358)
T cd03812 121 -------KK--KILKY---KVLRKLINRLATDYLACSEEAGKWLFGKVK-NKKFKVIPNGIDLEKFIFNEEIRKKRRELG 187 (358)
T ss_pred -------cc--hhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhCCC-cccEEEEeccCcHHHcCCCchhhhHHHHcC
Confidence 00 01111 222445677899999999999999887632 468899999999887642111 0
Q ss_pred CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...+...++++||+.|+|+++.+|+ |++.+.+
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~li~-a~~~l~~ 219 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEFLIE-IFAELLK 219 (358)
T ss_pred CCCCCEEEEEEeccccccChHHHHH-HHHHHHH
Confidence 1122468899999999999999999 9998753
No 21
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.31 E-value=4.6e-11 Score=113.02 Aligned_cols=201 Identities=16% Similarity=0.215 Sum_probs=117.7
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
|||+++.+.....||+|+++.+++++|.+.+.++++.+++........ ..+... +....+ .+.+.
T Consensus 1 mkI~~~~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~-~~~~~~--~~~~~~----~~~~~-------- 65 (359)
T PRK09922 1 MKIAFIGEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKA-WLKEIK--YAQSFS----NIKLS-------- 65 (359)
T ss_pred CeeEEecccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChH-HHHhcc--hhcccc----cchhh--------
Confidence 699999998877799999999999999998667887777754311111 111110 000000 00000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-cc-ccc--CCeEEEEeecCCcchHHhhhhhcccccccc
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIF--GCRVICYTHYPTISLDMISRVREGSSMYNN 190 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~~-~~~--~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~ 190 (298)
..+. . . ......+.+++.+||+++.....+.... .+ +.. +.+++..+|... .. ..
T Consensus 66 -~~~~--~-~---~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~------~~-------~~- 124 (359)
T PRK09922 66 -FLRR--A-K---HVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSL------DH-------KK- 124 (359)
T ss_pred -hhcc--c-H---HHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcc------cc-------cc-
Confidence 0000 0 0 0111123467789999997643221111 11 122 345566667532 00 00
Q ss_pred hhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCC
Q 022349 191 NASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY 269 (298)
Q Consensus 191 ~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~ 269 (298)
. . .+ .....+|.++++|+++++.+.+. |. +.++.|||+|+|.+.+.. +.....++
T Consensus 125 ---------~---~-~~---------~~~~~~d~~i~~S~~~~~~~~~~-~~~~~ki~vi~N~id~~~~~~-~~~~~~~~ 180 (359)
T PRK09922 125 ---------H---A-EC---------KKITCADYHLAISSGIKEQMMAR-GISAQRISVIYNPVEIKTIII-PPPERDKP 180 (359)
T ss_pred ---------h---h-hh---------hhhhcCCEEEEcCHHHHHHHHHc-CCCHHHEEEEcCCCCHHHccC-CCcccCCC
Confidence 0 0 00 01157999999999999999874 65 457899999999765532 11111124
Q ss_pred cEEEEEcCCC--CccChHHHHHHHHHhhh
Q 022349 270 PAIISVAQFR--PEKVRYKLISTRYYSYL 296 (298)
Q Consensus 270 ~~iLsvgRl~--p~Kn~~l~I~~Afa~~~ 296 (298)
..++++||+. ++|+++.+++ |++++.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~-a~~~~~ 208 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFD-GLSQTT 208 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHH-HHHhhC
Confidence 6899999996 4599999999 988754
No 22
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.29 E-value=1.2e-10 Score=110.06 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=121.7
Q ss_pred cEEEEEcCCCCC--CChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceee
Q 022349 35 TSVAFFHPNTND--GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIE 112 (298)
Q Consensus 35 ~~Va~~Hp~l~~--~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~ 112 (298)
|||++++++.-- .||+|+.+.+++++|.+. .++++ .|... ... . . -+.+ +.....
T Consensus 1 mkI~~i~~~~~p~~~GG~~~~v~~l~~~l~~~-~~v~v--~~~~~--~~~----~-~--~~~~------~~~~~~----- 57 (388)
T TIGR02149 1 MKVTVLTREYPPNVYGGAGVHVEELTRELARL-MDVDV--RCFGD--QRF----D-S--EGLT------VKGYRP----- 57 (388)
T ss_pred CeeEEEecccCccccccHhHHHHHHHHHHHHh-cCeeE--EcCCC--chh----c-C--CCeE------EEEecC-----
Confidence 689999887742 499999999999999886 46654 33221 110 0 0 0111 111100
Q ss_pred cccCCchhHHHHHHHHHHHHHH-HHhccCCcEEEeCCCccccccc-c-cccCCeEEEEeecCCcchHHhhhhhccccccc
Q 022349 113 ESTYPRFTMIGQSFGSVYLSWE-ALCKFTPLYYFDTSGYAFTYPL-A-RIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (298)
Q Consensus 113 ~~~~~~~~l~~~~l~~~~~a~~-~l~~~~pDv~i~s~~~~~~~p~-~-~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~ 189 (298)
+.......+.+......+. .....++|+++.....+...+. + +..+.|++...|.... . + .|...
T Consensus 58 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-~---~-~~~~~---- 125 (388)
T TIGR02149 58 ---WSELKEANKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAHSLEP-L---R-PWKEE---- 125 (388)
T ss_pred ---hhhccchhhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEeecccc-c---c-ccccc----
Confidence 0000001111111111111 1223469999965433222221 2 2457889988885320 0 0 01000
Q ss_pred chhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHh-CC-CCCceEEcCCCCCCcccccCC----
Q 022349 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLW-GI-PDRIKRVYPPCDTSGLQVLPL---- 263 (298)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~-g~-~~~~~VIYPPvd~~~~~~~~~---- 263 (298)
. . ... +.+..++.+.+.+.+|.|+++|+.+++.+.+.+ +. +.++.|+++++|.+.+.....
T Consensus 126 ---~------~---~~~-~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~ 192 (388)
T TIGR02149 126 ---Q------L---GGG-YKLSSWAEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNVVL 192 (388)
T ss_pred ---c------c---ccc-hhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHHHH
Confidence 0 0 000 122334466778899999999999999999988 44 467889999999877652100
Q ss_pred ---CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 264 ---ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 264 ---~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.-..+...++++||+.++|+++.+++ |++++.
T Consensus 193 ~~~~~~~~~~~i~~~Grl~~~Kg~~~li~-a~~~l~ 227 (388)
T TIGR02149 193 DRYGIDRSRPYILFVGRITRQKGVPHLLD-AVHYIP 227 (388)
T ss_pred HHhCCCCCceEEEEEcccccccCHHHHHH-HHHHHh
Confidence 00112458999999999999999999 998763
No 23
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.29 E-value=1.3e-10 Score=113.91 Aligned_cols=218 Identities=17% Similarity=0.196 Sum_probs=124.9
Q ss_pred CCCcEEEEE-cCC-CCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccc
Q 022349 32 NRTTSVAFF-HPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (298)
Q Consensus 32 ~~~~~Va~~-Hp~-l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~ 109 (298)
.+++||+++ ||+ ....||+|+.+.+++++|.+. ++++.+.|+..+. ++ ...+.. ++....
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~--G~eV~vlt~~~~~-~~-------~~~g~~------v~~~~~-- 117 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM--GDEVLVVTTDEGV-PQ-------EFHGAK------VIGSWS-- 117 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHC--CCeEEEEecCCCC-Cc-------cccCce------eeccCC--
Confidence 677999966 653 345699999999999999986 5777787754321 10 001111 111000
Q ss_pred eeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-c--ccccCCeEEEEeecCCcchHHhhhhhcccc
Q 022349 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L--ARIFGCRVICYTHYPTISLDMISRVREGSS 186 (298)
Q Consensus 110 ~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~--~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~ 186 (298)
...+. +..+.. . +.......+.+++.+||+++.+.......+ + ++..+.|+|..+|.-. .. +..
T Consensus 118 ~~~~~-~~~~~~--~-~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~-~~----~~~---- 184 (465)
T PLN02871 118 FPCPF-YQKVPL--S-LALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHV-PV----YIP---- 184 (465)
T ss_pred cCCcc-CCCcee--e-ccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCc-hh----hhh----
Confidence 00000 000000 0 000011133456788998885543221111 1 2345788888888522 00 000
Q ss_pred cccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC-
Q 022349 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE- 264 (298)
Q Consensus 187 ~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~- 264 (298)
.+. . ..++.. +..+.++..+.+|.++++|+..++.+.+.+.. +.++.|+++++|.+.+......
T Consensus 185 ~~~----------~---~~~~~~-~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~ 250 (465)
T PLN02871 185 RYT----------F---SWLVKP-MWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSE 250 (465)
T ss_pred ccc----------c---hhhHHH-HHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccH
Confidence 000 0 111111 11224566788999999999999999987533 4678999999999887521000
Q ss_pred --------CCCCCcEEEEEcCCCCccChHHHHHHHHHhh
Q 022349 265 --------RSTEYPAIISVAQFRPEKVRYKLISTRYYSY 295 (298)
Q Consensus 265 --------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~ 295 (298)
...++..++++||+.++|+++.+++ |+++.
T Consensus 251 ~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~-a~~~~ 288 (465)
T PLN02871 251 EMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKR-VMERL 288 (465)
T ss_pred HHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHH-HHHhC
Confidence 0112468999999999999999999 88764
No 24
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.28 E-value=2.4e-10 Score=105.27 Aligned_cols=190 Identities=14% Similarity=0.030 Sum_probs=118.1
Q ss_pred cEEEEEcCCCC-----CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccc
Q 022349 35 TSVAFFHPNTN-----DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRK 109 (298)
Q Consensus 35 ~~Va~~Hp~l~-----~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~ 109 (298)
|||+++-+++. ..||+|+++.+++++|.+. ++++.+++...+.... ... .... ...
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~--g~~V~v~~~~~~~~~~----~~~-----~~~~--------~~~ 61 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVAR--GHEVTLFASGDSKTAA----PLV-----PVVP--------EPL 61 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhc--CceEEEEecCCCCccc----cee-----eccC--------CCc
Confidence 68999988762 5799999999999999886 5777887754321110 000 0000 000
Q ss_pred eeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhccccccc
Q 022349 110 WIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYN 189 (298)
Q Consensus 110 ~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~ 189 (298)
.... . ...+..........+.+++.+||+++......... .++..+.|+++..|..... +.
T Consensus 62 ~~~~---~--~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~-~~~~~~~~~v~~~h~~~~~-------------~~ 122 (335)
T cd03802 62 RLDA---P--GRDRAEAEALALAERALAAGDFDIVHNHSLHLPLP-FARPLPVPVVTTLHGPPDP-------------EL 122 (335)
T ss_pred cccc---c--hhhHhhHHHHHHHHHHHhcCCCCEEEecCcccchh-hhcccCCCEEEEecCCCCc-------------cc
Confidence 0000 0 00011111111223345678899988654332221 2334578899989986610 00
Q ss_pred chhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCC
Q 022349 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEY 269 (298)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~ 269 (298)
.. ........+.+++.|+..++..... .++.|||+++|.+.+.. ... ++
T Consensus 123 --------------~~---------~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ngvd~~~~~~--~~~--~~ 171 (335)
T cd03802 123 --------------LK---------LYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNGIDLDDYPF--RGP--KG 171 (335)
T ss_pred --------------ch---------HHHhhCcCCeEEEecHHHHhhcccc----cccEEecCCcChhhCCC--CCC--CC
Confidence 00 1123456888999999998876654 48899999999988862 222 26
Q ss_pred cEEEEEcCCCCccChHHHHHHHHHh
Q 022349 270 PAIISVAQFRPEKVRYKLISTRYYS 294 (298)
Q Consensus 270 ~~iLsvgRl~p~Kn~~l~I~~Afa~ 294 (298)
+.++++||+.+.|+++.+|+ |+.+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~li~-~~~~ 195 (335)
T cd03802 172 DYLLFLGRISPEKGPHLAIR-AARR 195 (335)
T ss_pred CEEEEEEeeccccCHHHHHH-HHHh
Confidence 79999999999999999999 8764
No 25
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.27 E-value=4.1e-10 Score=102.31 Aligned_cols=216 Identities=18% Similarity=0.135 Sum_probs=129.0
Q ss_pred EEEEEcCCCCCC-ChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 36 SVAFFHPNTNDG-GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 36 ~Va~~Hp~l~~~-GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
||+++.+..... ||++.++.+++++|.+. ++++.+++...+.... ........ .....
T Consensus 1 kI~ii~~~~~~~~~G~~~~~~~l~~~L~~~--g~~v~i~~~~~~~~~~-----~~~~~~~~------~~~~~-------- 59 (374)
T cd03801 1 KILLVTPEYPPSVGGAERHVLELARALAAR--GHEVTVLTPGDGGLPD-----EEEVGGIV------VVRPP-------- 59 (374)
T ss_pred CeeEEecccCCccCcHhHHHHHHHHHHHhc--CceEEEEecCCCCCCc-----eeeecCcc------eecCC--------
Confidence 578888877655 99999999999999885 5777777754321110 00000000 00000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--cccccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
...................+.++..++|+++.......... .+...+.|.+..+|.+.... ...
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------~~~-- 125 (374)
T cd03801 60 PLLRVRRLLLLLLLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGR------------PGN-- 125 (374)
T ss_pred cccccchhHHHHHHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhc------------ccc--
Confidence 00000011111111111233356678998876544332222 12245789999999866100 000
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccc------cCCCC
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQV------LPLER 265 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~------~~~~~ 265 (298)
. ................+.+|.+++.|++.++.+.+.++. ..++.++++|++.+.+.. .....
T Consensus 126 -------~---~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd03801 126 -------E---LGLLLKLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGI 195 (374)
T ss_pred -------c---hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCC
Confidence 0 111122333335667889999999999999999999984 258999999999887631 01111
Q ss_pred CCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 266 STEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 266 ~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..+...++++||+.++|+++.+++ |+..+.+
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~~i~-~~~~~~~ 226 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDLLLE-ALAKLRK 226 (374)
T ss_pred cCCCeEEEEecchhhhcCHHHHHH-HHHHHhh
Confidence 122578999999999999999999 9887653
No 26
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.22 E-value=6.2e-10 Score=101.81 Aligned_cols=207 Identities=19% Similarity=0.142 Sum_probs=121.1
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||+++++.++ .||+|+++.+++++|.+.+ +++.+++.... ......... .+++ +..+.... .
T Consensus 1 ~i~~i~~~~~-~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~---~~~~~~~~~-~~i~------v~~~~~~~-----~ 62 (365)
T cd03807 1 KVLHVITGLD-VGGAERMLVRLLKGLDRDR--FEHVVISLTDR---GELGEELEE-AGVP------VYCLGKRP-----G 62 (365)
T ss_pred CeEEEEeecc-CccHHHHHHHHHHHhhhcc--ceEEEEecCcc---hhhhHHHHh-cCCe------EEEEeccc-----c
Confidence 6899999996 5999999999999998764 44455543221 111111111 1222 22222110 0
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-c-ccc-cCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARI-FGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~-~~~-~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
..... .+....+.+++.+||+++.......... + ... .+.+.+...|.-... .
T Consensus 63 ~~~~~-------~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------~--- 118 (365)
T cd03807 63 RPDPG-------ALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLD--------------L--- 118 (365)
T ss_pred cccHH-------HHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccc--------------c---
Confidence 01111 1111234456788998875432221111 1 122 466777777764410 0
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC-C------
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-E------ 264 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~-~------ 264 (298)
.. ...+..........+.+|.++++|..+++.+.+. +. ..+..|+++++|.+.+..... .
T Consensus 119 -------~~----~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 186 (365)
T cd03807 119 -------GK----KSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLDARARLREE 186 (365)
T ss_pred -------cc----hhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcccchHHHHHh
Confidence 00 0011122234556778999999999999999986 54 467889999998876642110 0
Q ss_pred --CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 --RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 --~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
-+.+...++++||+.++|+++.+++ |+..+.+
T Consensus 187 ~~~~~~~~~i~~~G~~~~~K~~~~li~-a~~~l~~ 220 (365)
T cd03807 187 LGLPEDTFLIGIVARLHPQKDHATLLR-AAALLLK 220 (365)
T ss_pred cCCCCCCeEEEEecccchhcCHHHHHH-HHHHHHH
Confidence 0012467889999999999999999 9987643
No 27
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.22 E-value=6.2e-10 Score=103.09 Aligned_cols=208 Identities=11% Similarity=-0.002 Sum_probs=120.6
Q ss_pred EEEEEcCCCCC-CChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 36 SVAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 36 ~Va~~Hp~l~~-~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
||..+.++... .||+|+++.+++++|.+. ++++.+++...+..... ... .+.. +..+.. .....
T Consensus 1 kil~i~~~~~p~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~~--~~~---~~~~------~~~~~~--~~~~~ 65 (357)
T cd03795 1 RVLHVGKFYPPDRGGIEQVIRDLAEGLAAR--GIEVAVLCASPEPKGRD--EER---NGHR------VIRAPS--LLNVA 65 (357)
T ss_pred CeeEecCCCCCCCCcHHHHHHHHHHHHHhC--CCceEEEecCCCCcchh--hhc---cCce------EEEeec--ccccc
Confidence 45666655543 799999999999999887 56667776543211100 000 0111 111110 00000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccccc--ccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR--IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~--~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
..+.. . .+...+. ++..+||+++-..+......... ..+.+.+...|......
T Consensus 66 ~~~~~---~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------------- 120 (357)
T cd03795 66 STPFS---P----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHSDIVKQ----------------- 120 (357)
T ss_pred ccccc---H----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcChhhcc-----------------
Confidence 00000 0 0111111 44678997775433221111111 13677888888643100
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC------CCC
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ERS 266 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~------~~~ 266 (298)
......+..+.++..+.+|.+++.|+.+.+.+...++.+.+..++++++|.+.+..... ...
T Consensus 121 ------------~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~~ 188 (357)
T cd03795 121 ------------KLLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRA 188 (357)
T ss_pred ------------chhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHhhcCC
Confidence 01112233335667889999999999999999888764567899999999887653211 011
Q ss_pred CCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 267 TEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 267 ~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.++..++++||+.++||++.+++ |+.++.
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~-a~~~l~ 217 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLE-AAAALP 217 (357)
T ss_pred CCCcEEEEecccccccCHHHHHH-HHHhcc
Confidence 23578999999999999999999 998753
No 28
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.22 E-value=5.2e-10 Score=103.28 Aligned_cols=198 Identities=14% Similarity=0.004 Sum_probs=115.4
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||+|+.++....||.|+++.+++++|.+.+ +++.+++....... .. .... . +...... .
T Consensus 1 kI~~v~~~~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~------~~-~~~~-~-~~~~~~~--------~-- 59 (366)
T cd03822 1 RIALVSPYPPRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPS------LL-YGGE-Q-EVVRVIV--------L-- 59 (366)
T ss_pred CeEEecCCCCCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCc------cc-CCCc-c-cceeeee--------c--
Confidence 699999999778999999999999999875 55556553321100 00 0000 0 0000000 0
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc-----cc---ccCCeEEEEeecCCcchHHhhhhhccccc
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-----AR---IFGCRVICYTHYPTISLDMISRVREGSSM 187 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~-----~~---~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~ 187 (298)
.... . .....+.++..+||+++.+.......|. .. ..+.|+|+.+|.....
T Consensus 60 ~~~~--~------~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------- 118 (366)
T cd03822 60 DNPL--D------YRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLH------------- 118 (366)
T ss_pred CCch--h------HHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCcc-------------
Confidence 0000 0 1111334567889988754322111121 11 1578999999986200
Q ss_pred ccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC--CCCceEEcCCCCCCcccccCC--
Q 022349 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI--PDRIKRVYPPCDTSGLQVLPL-- 263 (298)
Q Consensus 188 y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~--~~~~~VIYPPvd~~~~~~~~~-- 263 (298)
.. . . . .....+...+.+|.+++.| .+..++++.. +.++.|+++|++...+.....
T Consensus 119 ~~----------~-~---~----~~~~~~~~~~~~d~ii~~s---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 177 (366)
T cd03822 119 EP----------R-P---G----DRALLRLLLRRADAVIVMS---SELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLK 177 (366)
T ss_pred cc----------c-h---h----hhHHHHHHHhcCCEEEEee---HHHHHHHHhhcCCCcEEEeCCCCcCcccCCchhhH
Confidence 00 0 0 0 1111344567899999998 3334444332 268999999998776653210
Q ss_pred --CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 264 --ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 264 --~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
....++..++++||+.++|+++.+++ |++.+.+
T Consensus 178 ~~~~~~~~~~i~~~G~~~~~K~~~~ll~-a~~~~~~ 212 (366)
T cd03822 178 ALGGLDGRPVLLTFGLLRPYKGLELLLE-ALPLLVA 212 (366)
T ss_pred hhcCCCCCeEEEEEeeccCCCCHHHHHH-HHHHHHh
Confidence 01122568999999999999999999 9987754
No 29
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.21 E-value=8.4e-10 Score=102.14 Aligned_cols=202 Identities=15% Similarity=0.065 Sum_probs=123.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||+++.+.+ .+|+|+.+++++++|.+. ++++.++|....... . ...... .... ... ..
T Consensus 1 ki~~~~~~~--~~~~~~~~~~~~~~L~~~--g~~v~v~~~~~~~~~-~----~~~~~~-~~~~-----~~~---~~---- 58 (355)
T cd03799 1 KIAYLVKEF--PRLSETFILREILALEAA--GHEVEIFSLRPPEDT-L----VHPEDR-AELA-----RTR---YL---- 58 (355)
T ss_pred CEEEECCCC--CCcchHHHHHHHHHHHhC--CCeEEEEEecCcccc-c----cccccc-cccc-----chH---HH----
Confidence 589999998 356999999999999886 577778875431111 0 000000 0000 000 00
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--cc-cccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LA-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~~-~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
...+..+.......+.++..++|+++...+...... +. +..+.+.+..+|.+.. + ..
T Consensus 59 ----~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~------~~-- 118 (355)
T cd03799 59 ----ARSLALLAQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI--------F------RS-- 118 (355)
T ss_pred ----HHHHHHHHHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc--------c------cc--
Confidence 001111111112223345678998886543221111 11 2346788888887661 1 00
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCcE
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPA 271 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~ 271 (298)
.. . ..++...+.+|.++++|++.++.+++.++. ..++.|+++++|.+.+...+.....++..
T Consensus 119 -------~~--~--------~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~~~~~~~~~ 181 (355)
T cd03799 119 -------PD--A--------IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPPPPPGEPLR 181 (355)
T ss_pred -------Cc--h--------HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccccccCCCeE
Confidence 00 0 123455678999999999999999998764 56889999999988776322011122468
Q ss_pred EEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 272 IISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 272 iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
++++||+.++|+++.+++ |+.++.+
T Consensus 182 i~~~g~~~~~k~~~~l~~-~~~~l~~ 206 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLE-ALALLKD 206 (355)
T ss_pred EEEEeeeccccCHHHHHH-HHHHHhh
Confidence 999999999999999999 9987654
No 30
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.19 E-value=2.1e-09 Score=104.04 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=58.5
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc----CCCCCCCCcEEEEEcCC--CCccChHHHH
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----PLERSTEYPAIISVAQF--RPEKVRYKLI 288 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~----~~~~~~~~~~iLsvgRl--~p~Kn~~l~I 288 (298)
++...+.++.+|+.|+|+++.+++.++ ..++.|||+++|++.+... +.....+...++++||. .+.|+++.+|
T Consensus 184 ~~~~~~~~~~iV~~S~~l~~~~~~~~~-~~~i~vI~NGid~~~~~~~~~~~~~~~~~~~~~il~v~~~~~~~~Kg~~~li 262 (405)
T PRK10125 184 FREMLALGCQFISPSQHVADAFNSLYG-PGRCRIINNGIDMATEAILAELPPVRETQGKPKIAVVAHDLRYDGKTDQQLV 262 (405)
T ss_pred HHHHhhcCcEEEEcCHHHHHHHHHHcC-CCCEEEeCCCcCcccccccccccccccCCCCCEEEEEEeccccCCccHHHHH
Confidence 334455688999999999999999887 4689999999997533211 11111224689999994 3779999999
Q ss_pred HHHHHhh
Q 022349 289 STRYYSY 295 (298)
Q Consensus 289 ~~Afa~~ 295 (298)
+ |++++
T Consensus 263 ~-A~~~l 268 (405)
T PRK10125 263 R-EMMAL 268 (405)
T ss_pred H-HHHhC
Confidence 9 99865
No 31
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.19 E-value=4.9e-10 Score=104.79 Aligned_cols=133 Identities=17% Similarity=0.212 Sum_probs=89.6
Q ss_pred HhccCCcEEEeCCCccccccc---ccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHH
Q 022349 136 LCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (298)
Q Consensus 136 l~~~~pDv~i~s~~~~~~~p~---~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~ 212 (298)
+++.+||+++...+.. ..+. ++..+.|++++.|.-+.... .. . ....+ ++.+.
T Consensus 78 ~~~~~~dvvh~~~~~~-~~~~~~~~~~~~~p~i~~~h~~~~~~~------------~~--~------~~~~~---~~~~~ 133 (367)
T cd05844 78 LRRHRPDLVHAHFGFD-GVYALPLARRLGVPLVVTFHGFDATTS------------LA--L------LLRSR---WALYA 133 (367)
T ss_pred HHhhCCCEEEeccCch-HHHHHHHHHHcCCCEEEEEeCcccccc------------ch--h------hcccc---hhHHH
Confidence 5678899999764432 2222 23457899999996441100 00 0 00000 22233
Q ss_pred HHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCccChHHHHHHH
Q 022349 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTR 291 (298)
Q Consensus 213 ~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~A 291 (298)
..++...+.+|.++++|+++++.+.+. |. +.++.|+++++|.+.+... ....++..++++||+.++||++.+|+ |
T Consensus 134 ~~~~~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~--~~~~~~~~i~~~G~~~~~K~~~~li~-a 209 (367)
T cd05844 134 RRRRRLARRAALFIAVSQFIRDRLLAL-GFPPEKVHVHPIGVDTAKFTPA--TPARRPPRILFVGRFVEKKGPLLLLE-A 209 (367)
T ss_pred HHHHHHHHhcCEEEECCHHHHHHHHHc-CCCHHHeEEecCCCCHHhcCCC--CCCCCCcEEEEEEeeccccChHHHHH-H
Confidence 345667789999999999999999986 54 4568899999998877532 11222578999999999999999999 9
Q ss_pred HHhhh
Q 022349 292 YYSYL 296 (298)
Q Consensus 292 fa~~~ 296 (298)
++.+.
T Consensus 210 ~~~l~ 214 (367)
T cd05844 210 FARLA 214 (367)
T ss_pred HHHHH
Confidence 98765
No 32
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.15 E-value=2.4e-09 Score=98.32 Aligned_cols=217 Identities=18% Similarity=0.138 Sum_probs=121.7
Q ss_pred EEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 36 ~Va~~Hp~l~-~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
||.++.+.+. ..||+|+++.+++++|++. ++++.+++...+..... ........ ...... ..
T Consensus 1 kIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~~-----~~~~~~~~----~~~~~~---~~--- 63 (375)
T cd03821 1 KILHVIPSFDPKYGGPVRVVLNLSKALAKL--GHEVTVATTDAGGDPLL-----VALNGVPV----KLFSIN---VA--- 63 (375)
T ss_pred CeEEEcCCCCcccCCeehHHHHHHHHHHhc--CCcEEEEecCCCCccch-----hhccCcee----eecccc---hh---
Confidence 5888888874 6799999999999999876 56777777543211100 00000000 000000 00
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcc-cccccc---cccCCeEEEEeecCCcchHHhhhhhcccccccc
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYA-FTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNN 190 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~-~~~p~~---~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~ 190 (298)
.. .......+......+......++|+++...... ...+.. +..+.|.+.+.|...- .+.+ .
T Consensus 64 -~~-~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~------~- 129 (375)
T cd03821 64 -YG-LNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLD-----PWAL------P- 129 (375)
T ss_pred -hh-hhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccc-----cccc------c-
Confidence 00 000000000111111223346799777543211 111221 1247888988886430 0000 0
Q ss_pred hhhhhhchhhhHHH-HHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC------
Q 022349 191 NASIAQSNWLSQCK-IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ 263 (298)
Q Consensus 191 ~~~~~~~~~~~~~k-~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~------ 263 (298)
...++ .++... ......+.+|.++++|+.......+... ..+..|+++++|.+.+...+.
T Consensus 130 ---------~~~~~~~~~~~~---~~~~~~~~~~~i~~~s~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~~~~ 196 (375)
T cd03821 130 ---------HKALKKRLAWFL---FERRLLQAAAAVHATSEQEAAEIRRLGL-KAPIAVIPNGVDIPPFAALPSRGRRRK 196 (375)
T ss_pred ---------cchhhhHHHHHH---HHHHHHhcCCEEEECCHHHHHHHHhhCC-cccEEEcCCCcChhccCcchhhhhhhh
Confidence 01111 122221 2345678899999999998888877543 467899999999887753211
Q ss_pred -CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 264 -ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 264 -~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
....++..++++||+.++|+++.+++ |+.++.+
T Consensus 197 ~~~~~~~~~i~~~G~~~~~K~~~~li~-a~~~l~~ 230 (375)
T cd03821 197 FPILPDKRIILFLGRLHPKKGLDLLIE-AFAKLAE 230 (375)
T ss_pred ccCCCCCcEEEEEeCcchhcCHHHHHH-HHHHhhh
Confidence 11123578999999999999999999 9987764
No 33
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.15 E-value=2.3e-09 Score=101.04 Aligned_cols=81 Identities=23% Similarity=0.309 Sum_probs=64.2
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC--------CCCCCCcEEEEEcCCCCccChH
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL--------ERSTEYPAIISVAQFRPEKVRY 285 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~--------~~~~~~~~iLsvgRl~p~Kn~~ 285 (298)
.+.+.+.+|.++++|+..++.+.+.++. ..+..||+|++|.+.+..... ....++.+++++||+.+.|+++
T Consensus 157 ~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~ 236 (398)
T cd03800 157 EERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGID 236 (398)
T ss_pred HHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHH
Confidence 4567889999999999999999999874 345889999999887653111 1112257899999999999999
Q ss_pred HHHHHHHHhhh
Q 022349 286 KLISTRYYSYL 296 (298)
Q Consensus 286 l~I~~Afa~~~ 296 (298)
.+++ |+..+.
T Consensus 237 ~ll~-a~~~l~ 246 (398)
T cd03800 237 TLIR-AYAELP 246 (398)
T ss_pred HHHH-HHHHHH
Confidence 9999 998765
No 34
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.15 E-value=1.9e-09 Score=98.84 Aligned_cols=73 Identities=11% Similarity=0.001 Sum_probs=58.1
Q ss_pred cEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 223 DLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 223 d~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
|.++++|++.++.+.+....+.++.|+++++|.+.+.........++..++++||+.++|+++.+++ |+..+.
T Consensus 145 d~ii~~s~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~li~-~~~~l~ 217 (359)
T cd03823 145 DAVIAPSRFLLDRYVANGLFAEKISVIRNGIDLDRAKRPRRAPPGGRLRFGFIGQLTPHKGVDLLLE-AFKRLP 217 (359)
T ss_pred CEEEEeCHHHHHHHHHcCCCccceEEecCCcChhhccccccCCCCCceEEEEEecCccccCHHHHHH-HHHHHH
Confidence 9999999999999998764335889999999988775321101122567889999999999999999 988765
No 35
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.14 E-value=2.3e-09 Score=99.40 Aligned_cols=202 Identities=13% Similarity=0.115 Sum_probs=118.7
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
+|.++++.++ .||+|+++.+++++|.+. ++++.+++...+.... .... .. ....+.. .
T Consensus 1 ~il~~~~~~~-~gG~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~-~~~~-----~~------~~~~~~~-----~-- 58 (360)
T cd04951 1 KILYVITGLG-LGGAEKQVVDLADQFVAK--GHQVAIISLTGESEVK-PPID-----AT------IILNLNM-----S-- 58 (360)
T ss_pred CeEEEecCCC-CCCHHHHHHHHHHhcccC--CceEEEEEEeCCCCcc-chhh-----cc------ceEEecc-----c--
Confidence 4788999985 699999999999999886 4566666643211110 0000 00 0101100 0
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-cc-c-ccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-R-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~~-~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
......+ . ......+.+++.+||+++.....+.... +. + ..+.+.+..+|....
T Consensus 59 ~~~~~~~-~---~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~------------------- 115 (360)
T cd04951 59 KNPLSFL-L---ALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNE------------------- 115 (360)
T ss_pred ccchhhH-H---HHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCc-------------------
Confidence 0001111 1 1111233456778998886543222111 11 1 235677887886430
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC--------
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL-------- 263 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~-------- 263 (298)
.+..+. +.++.....++.+++.|....+.+.+..+. ++++.++++++|.+.+.....
T Consensus 116 -------~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~ 181 (360)
T cd04951 116 -------GGRLRM-------LAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNA 181 (360)
T ss_pred -------hhHHHH-------HHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHH
Confidence 001111 112334455788899999999999888654 568899999999877642110
Q ss_pred -CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 264 -ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 264 -~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
....+...++++||+.++|+++.+|+ |+.++.+
T Consensus 182 ~~~~~~~~~~l~~g~~~~~kg~~~li~-a~~~l~~ 215 (360)
T cd04951 182 LGVKNDTFVILAVGRLVEAKDYPNLLK-AFAKLLS 215 (360)
T ss_pred cCcCCCCEEEEEEeeCchhcCcHHHHH-HHHHHHh
Confidence 00112467999999999999999999 9987653
No 36
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.11 E-value=3.5e-09 Score=103.18 Aligned_cols=226 Identities=15% Similarity=0.082 Sum_probs=114.7
Q ss_pred CChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhHHHHHH
Q 022349 47 GGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSF 126 (298)
Q Consensus 47 ~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l~~~~l 126 (298)
.||+|+.+.+++++|.+.+.-++|.|+|...+. . .........+ .+....+++..+... +..+......+..+
T Consensus 25 ~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~-~-~~~~~~~~~~-~~~~~gv~v~r~~~~----~~~~~~~~~~~~~~ 97 (439)
T TIGR02472 25 TGGQTKYVLELARALARRSEVEQVDLVTRLIKD-A-KVSPDYAQPI-ERIAPGARIVRLPFG----PRRYLRKELLWPYL 97 (439)
T ss_pred CCCcchHHHHHHHHHHhCCCCcEEEEEeccccC-c-CCCCccCCCe-eEeCCCcEEEEecCC----CCCCcChhhhhhhH
Confidence 499999999999999997431267788853210 0 0000000000 011222333332211 10111111122221
Q ss_pred HHHHHH-HHHHhc--cCCcEEEeCCCccccccc--ccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhh
Q 022349 127 GSVYLS-WEALCK--FTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (298)
Q Consensus 127 ~~~~~a-~~~l~~--~~pDv~i~s~~~~~~~p~--~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 201 (298)
..+... .+.+++ .+||+++.....+..... ++..+.|+|..+|....... +.+...+ +. ..
T Consensus 98 ~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H~~~~~~~--~~~~~~~--~~----------~~ 163 (439)
T TIGR02472 98 DELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKR--RRLLAAG--LK----------PQ 163 (439)
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCCEEEecccccchhh--hhcccCC--CC----------hh
Confidence 111111 222333 269999965322211111 12357899999996431100 0000000 00 00
Q ss_pred HHHHHHHHHH-HHHHHHhccCCcEEEEcCHHHHHHHH-HHhCC-CCCceEEcCCCCCCcccccC-CC-------------
Q 022349 202 QCKIVYYTFF-SWMYGLVGSCADLAMVNSSWTQSHIE-KLWGI-PDRIKRVYPPCDTSGLQVLP-LE------------- 264 (298)
Q Consensus 202 ~~k~~y~~~~-~~~~~~~~~~ad~viaNS~~Ta~~i~-~~~g~-~~~~~VIYPPvd~~~~~~~~-~~------------- 264 (298)
.....|...- ....+++.+.+|.|+++|+...+... +..+. +.++.|||+.||++.|.... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~ 243 (439)
T TIGR02472 164 QIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL 243 (439)
T ss_pred hhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhc
Confidence 1111221100 11256778899999999976544433 33344 56899999999998885321 00
Q ss_pred CCCCCcEEEEEcCCCCccChHHHHHHHHHh
Q 022349 265 RSTEYPAIISVAQFRPEKVRYKLISTRYYS 294 (298)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~ 294 (298)
...++.+++++||+.|+||++.+|+ ||++
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~li~-A~~~ 272 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPSLVE-AYGR 272 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHHHHH-HHHh
Confidence 0112468999999999999999999 9975
No 37
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.11 E-value=1.1e-08 Score=93.05 Aligned_cols=209 Identities=14% Similarity=0.071 Sum_probs=115.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeeccc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEEST 115 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~ 115 (298)
||.++.+. .||+++++.+++++|.+. ++++.+++...+... .. ...+.+ +..+....
T Consensus 1 kIl~i~~~---~~g~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~-----~~-~~~~~~------~~~~~~~~------ 57 (359)
T cd03808 1 KILHIVTV---DGGLYSFRLPLIKALRAA--GYEVHVVAPPGDELE-----EL-EALGVK------VIPIPLDR------ 57 (359)
T ss_pred CeeEEEec---chhHHHHHHHHHHHHHhc--CCeeEEEecCCCccc-----cc-ccCCce------EEeccccc------
Confidence 57788877 589999999999999776 567777775431110 00 011211 11111100
Q ss_pred CCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-cc-c-ccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 116 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-R-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 116 ~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~~-~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
...... ..+.......+.+++.+||+++.......... +. + ....+++..+|.... . ..
T Consensus 58 -~~~~~~-~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~----~~--- 119 (359)
T cd03808 58 -RGINPF-KDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGF---------V----FT--- 119 (359)
T ss_pred -cccChH-hHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcch---------h----hc---
Confidence 000001 11111111233466788998875432222122 11 2 123344444454320 0 00
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCC--CCceEEcCCCCCCcccccCCCCCCCCc
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIP--DRIKRVYPPCDTSGLQVLPLERSTEYP 270 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~--~~~~VIYPPvd~~~~~~~~~~~~~~~~ 270 (298)
. .......+...+++..+.+|.++++|+..++.+.+.++.+ ....++++++|.+.+...+.....+..
T Consensus 120 -------~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T cd03808 120 -------S---GGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEPIPEDDP 189 (359)
T ss_pred -------c---chhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccccCCCCc
Confidence 0 0012233444566777889999999999999999987631 334444455666655422110112257
Q ss_pred EEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 271 AIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 271 ~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.++++||+.++|+++.+++ |+..+.
T Consensus 190 ~i~~~G~~~~~k~~~~li~-~~~~l~ 214 (359)
T cd03808 190 VFLFVARLLKDKGIDELLE-AARILK 214 (359)
T ss_pred EEEEEeccccccCHHHHHH-HHHHHH
Confidence 9999999999999999999 988764
No 38
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.11 E-value=6.7e-09 Score=95.59 Aligned_cols=232 Identities=13% Similarity=0.051 Sum_probs=123.9
Q ss_pred EEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 36 SVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 36 ~Va~~Hp~l~-~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
||.|+-+... ..||+++.+.+++++|++. +++|.+++......... ....+.......+++..+......
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--- 71 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKR--GHEVTVITGSPNYPSGK----IYKGYKREEVDGVRVHRVPLPPYK--- 71 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhC--CceEEEEecCCCccccc----ccccceEEecCCeEEEEEecCCCC---
Confidence 4666666553 3489999999999999986 56667776543111100 000000011111222221110000
Q ss_pred cCCchhHHHHHHHHHHHHHHHH--hccCCcEEEeCC-Ccccccccc---cccCCeEEEEeecCCcchHHhhhhhcccccc
Q 022349 115 TYPRFTMIGQSFGSVYLSWEAL--CKFTPLYYFDTS-GYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMY 188 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l--~~~~pDv~i~s~-~~~~~~p~~---~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y 188 (298)
....+..+...+.........+ +..+||+++-.. ......+.. ...+.|.+..+|... .... ....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~-~~~~----~~~~--- 143 (394)
T cd03794 72 KNGLLKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLW-PESA----VALG--- 143 (394)
T ss_pred ccchHHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhc-chhH----HHcc---
Confidence 0000011111111111112222 367799777543 111112211 123788999999643 1110 0000
Q ss_pred cchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC----
Q 022349 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL---- 263 (298)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~---- 263 (298)
.........+.+..+.+...+.+|.+++.|+..++.+. .++. ..++.|++++++.+.+.....
T Consensus 144 -----------~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 211 (394)
T cd03794 144 -----------LLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADESL 211 (394)
T ss_pred -----------CccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhhh
Confidence 00001111233444466778899999999999999998 4444 568899999998776653210
Q ss_pred ---CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 264 ---ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 264 ---~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
....+...++++||+.++|+++.+++ |+.++.+
T Consensus 212 ~~~~~~~~~~~i~~~G~~~~~k~~~~l~~-~~~~l~~ 247 (394)
T cd03794 212 RKELGLDDKFVVLYAGNIGRAQGLDTLLE-AAALLKD 247 (394)
T ss_pred hhccCCCCcEEEEEecCcccccCHHHHHH-HHHHHhh
Confidence 01122468999999999999999999 9987654
No 39
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.09 E-value=8e-09 Score=94.30 Aligned_cols=130 Identities=17% Similarity=0.154 Sum_probs=87.4
Q ss_pred ccCCcEEEeCCCcccccccc---cccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHH
Q 022349 138 KFTPLYYFDTSGYAFTYPLA---RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (298)
Q Consensus 138 ~~~pDv~i~s~~~~~~~p~~---~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~ 214 (298)
..++|+++............ +..+.|.+.++|.+.... +.. . . .....
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------------~~~---------~----~----~~~~~ 141 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNL------------LPR---------K----R----LLRAL 141 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcc------------cCc---------h----h----hHHHH
Confidence 77899777553322111111 123568999999876210 000 0 0 12233
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC------CCCCCCcEEEEEcCCCCccChHHHH
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL------ERSTEYPAIISVAQFRPEKVRYKLI 288 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~------~~~~~~~~iLsvgRl~p~Kn~~l~I 288 (298)
.+...+.+|.+++.|++.++.+++.+..+.++.|+++++|.+.+..... ....+...++++||+.+.|+++.++
T Consensus 142 ~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 142 LRRALRRADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred HHHHHhcCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHH
Confidence 4566789999999999999999998422478999999999887753211 1112357899999999999999999
Q ss_pred HHHHHhhhh
Q 022349 289 STRYYSYLD 297 (298)
Q Consensus 289 ~~Afa~~~~ 297 (298)
+ |+..+.+
T Consensus 222 ~-~~~~~~~ 229 (377)
T cd03798 222 E-ALARLLK 229 (377)
T ss_pred H-HHHHHHh
Confidence 9 9887653
No 40
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.04 E-value=1.3e-08 Score=93.47 Aligned_cols=218 Identities=14% Similarity=0.102 Sum_probs=121.2
Q ss_pred EEEEEcCC-CCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 36 SVAFFHPN-TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 36 ~Va~~Hp~-l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
||.++++. ....||+++.+.+++++|.+. +++|.++|+....... ... ..... ..... ..
T Consensus 1 kil~~~~~~~p~~~G~~~~~~~l~~~L~~~--g~~v~v~~~~~~~~~~------~~~-~~~~~----~~~~~------~~ 61 (374)
T cd03817 1 KIGIFTDTYLPQVNGVATSIRRLAEELEKR--GHEVYVVAPSYPGAPE------EEE-VVVVR----PFRVP------TF 61 (374)
T ss_pred CeeEeehhccCCCCCeehHHHHHHHHHHHc--CCeEEEEeCCCCCCCc------ccc-ccccc----ccccc------cc
Confidence 46666654 345689999999999999987 5666777654311100 000 00000 00000 00
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc---ccccCCeEEEEeecCCcchHHhhhhhcccccccch
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~---~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~ 191 (298)
...+....+... ......++..+||+++........... ++..+.|++..+|.+.- ++.....
T Consensus 62 ~~~~~~~~~~~~---~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~--------- 127 (374)
T cd03817 62 KYPDFRLPLPIP---RALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYE--DYTHYVP--------- 127 (374)
T ss_pred hhhhhhccccHH---HHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHH--HHHHHHh---------
Confidence 001111111111 111223567789988765432211111 12347888998887651 1111000
Q ss_pred hhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC-------C
Q 022349 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------E 264 (298)
Q Consensus 192 ~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~-------~ 264 (298)
.. ......... ....+...+.+|.++++|++.++.+.+. +...+..|+++++|.+.+...+. .
T Consensus 128 ----~~--~~~~~~~~~---~~~~~~~~~~~d~i~~~s~~~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd03817 128 ----LG--RLLARAVVR---RKLSRRFYNRCDAVIAPSEKIADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDERRKLG 197 (374)
T ss_pred ----cc--cchhHHHHH---HHHHHHHhhhCCEEEeccHHHHHHHHhc-CCCCceEEcCCccchhccCccchhHHHHhcC
Confidence 00 000011111 0345677889999999999999998875 33345789999999887753211 1
Q ss_pred CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 ~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...++..++++||+.++|+++.+++ |++.+.+
T Consensus 198 ~~~~~~~i~~~G~~~~~k~~~~l~~-~~~~~~~ 229 (374)
T cd03817 198 IPEDEPVLLYVGRLAKEKNIDFLIR-AFARLLK 229 (374)
T ss_pred CCCCCeEEEEEeeeecccCHHHHHH-HHHHHHH
Confidence 1122568899999999999999999 9887653
No 41
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.02 E-value=1.2e-08 Score=96.74 Aligned_cols=197 Identities=15% Similarity=0.108 Sum_probs=105.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHH---hhcccc-ceeecCCCeEEEcccccee
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLA---RAVDRF-GVELLHPPKVVHLYRRKWI 111 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~---~~~~~f-~~~l~~~~~~i~l~~~~~~ 111 (298)
||++|-+.+ .+||+|+++.++++.|.+.+ +++.+++... .+.... ...... +.. . .
T Consensus 1 ki~~~~~~~-~~GGv~~~~~~l~~~l~~~g--~~v~~~~~~~---~~~~~~~~~~~~~~~~g~~------~-~------- 60 (372)
T cd03792 1 KVLHVNSTP-YGGGVAEILHSLVPLMRDLG--VDTRWEVIKG---DPEFFNVTKKFHNALQGAD------I-E------- 60 (372)
T ss_pred CeEEEeCCC-CCCcHHHHHHHHHHHHHHcC--CCceEEecCC---ChhHHHHHHHhhHhhcCCC------C-C-------
Confidence 588888877 57999999999999999975 4555555322 111111 110000 100 0 0
Q ss_pred ecccCCchhHHHHHHHHHH--HHHHHHhccCCcEEEeCCCccccccccc-ccCCeEEEEeecCCcchHHhhhhhcccccc
Q 022349 112 EESTYPRFTMIGQSFGSVY--LSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMY 188 (298)
Q Consensus 112 ~~~~~~~~~l~~~~l~~~~--~a~~~l~~~~pDv~i~s~~~~~~~p~~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y 188 (298)
.+.. ....+.... .+.+.+...+||+++.........+.+. ..+.|+|..+|.+.- . +
T Consensus 61 ----~~~~--~~~~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~~i~~~H~~~~-~------------~ 121 (372)
T cd03792 61 ----LSEE--EKEIYLEWNEENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRPWIWRCHIDLS-S------------P 121 (372)
T ss_pred ----CCHH--HHHHHHHHHHHHhccccccCCCCEEEECCCCchhHHHhhhcCCCeEEEEeeeecC-C------------C
Confidence 0100 000000000 0000133567998875543332233222 237889999998551 0 0
Q ss_pred cchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc-cc--C---
Q 022349 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ-VL--P--- 262 (298)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~-~~--~--- 262 (298)
. + ..++. .++..+++|.+++.| .+.+.+.++ .+..|+++.||..... .. +
T Consensus 122 -----------~---~-~~~~~----~~~~~~~~d~~i~~~---~~~~~~~~~--~~~~vipngvd~~~~~~~~~~~~~~ 177 (372)
T cd03792 122 -----------N---R-RVWDF----LQPYIEDYDAAVFHL---PEYVPPQVP--PRKVIIPPSIDPLSGKNRELSPADI 177 (372)
T ss_pred -----------c---H-HHHHH----HHHHHHhCCEEeecH---HHhcCCCCC--CceEEeCCCCCCCccccCCCCHHHH
Confidence 0 0 11111 123446688888887 222333333 3334999999875311 00 0
Q ss_pred ------CCCCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 263 ------LERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 263 ------~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.....++.+++++||+.|+||++.+|+ ||+.+.
T Consensus 178 ~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~-a~~~l~ 216 (372)
T cd03792 178 EYILEKYGIDPERPYITQVSRFDPWKDPFGVID-AYRKVK 216 (372)
T ss_pred HHHHHHhCCCCCCcEEEEEeccccccCcHHHHH-HHHHHH
Confidence 000112578999999999999999999 998765
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.02 E-value=7.3e-09 Score=95.37 Aligned_cols=213 Identities=16% Similarity=0.069 Sum_probs=118.2
Q ss_pred EEEEEcCCC-CCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 36 SVAFFHPNT-NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 36 ~Va~~Hp~l-~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
||+++.+.. ...||+|+.+.+++++|++. ++++.++|....... ..... ...++. .....
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~--g~~v~~~~~~~~~~~----~~~~~--~~~~~~----~~~~~------- 61 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRAR--GHEVLVIAPGPFRES----EGPAR--VVPVPS----VPLPG------- 61 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHC--CCEEEEEeCCchhhc----cCCCC--ceeecc----cccCc-------
Confidence 577777644 33499999999999999986 577777775431100 00000 000100 00000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc---ccccCCeEEEEeecCCcchHHhhhhhcccccccch
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNN 191 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~---~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~ 191 (298)
......... ......+.++..+||+++-.......... ++..+.|.+..+|... . .+... +
T Consensus 62 -~~~~~~~~~---~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~----~~~~~----~--- 125 (364)
T cd03814 62 -YPEIRLALP---PRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDF-P----EYLRY----Y--- 125 (364)
T ss_pred -ccceEeccc---chhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecCh-H----HHhhh----c---
Confidence 000000000 00011223457789977643222211111 1235788898888643 1 00000 0
Q ss_pred hhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCC------
Q 022349 192 ASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER------ 265 (298)
Q Consensus 192 ~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~------ 265 (298)
. ............++..+.+|.+++.|++.++.+.+... .+..|+++++|.+.+.......
T Consensus 126 --------~---~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 192 (364)
T cd03814 126 --------G---LGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARGF--RRVRLWPRGVDTELFHPRRRDEALRARL 192 (364)
T ss_pred --------c---cchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccCC--CceeecCCCccccccCcccccHHHHHHh
Confidence 0 00111112333556678899999999999997666543 6788999999887664211000
Q ss_pred -CCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 266 -STEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 266 -~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..+...++++||+.++|+++.+++ |+..+.+
T Consensus 193 ~~~~~~~i~~~G~~~~~k~~~~~i~-~~~~l~~ 224 (364)
T cd03814 193 GPPDRPVLLYVGRLAPEKNLEALLD-ADLPLRR 224 (364)
T ss_pred CCCCCeEEEEEeccccccCHHHHHH-HHHHhhh
Confidence 112467899999999999999999 9988754
No 43
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.01 E-value=2.4e-08 Score=96.68 Aligned_cols=85 Identities=15% Similarity=0.260 Sum_probs=61.2
Q ss_pred HHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC-------C-----------------
Q 022349 209 TFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------L----------------- 263 (298)
Q Consensus 209 ~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~-------~----------------- 263 (298)
+++.++.++..+.+|.|+++|+.+++.+.+ +|. +.++.|||+-+ .+.|...+ .
T Consensus 148 ~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (415)
T cd03816 148 RLAKWYEKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAKTFLTRELRIGAV 225 (415)
T ss_pred HHHHHHHHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCC-HHHceeCcHHHHHHHHHhccccccccccccccc
Confidence 344455667788999999999999999998 665 67899999742 22222100 0
Q ss_pred -CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 264 -ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 264 -~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
....+...++++||+.+.|+++.+|+ |++.++
T Consensus 226 ~~~~~~~~vi~~~grl~~~K~~~~li~-A~~~l~ 258 (415)
T cd03816 226 QLSEERPALLVSSTSWTPDEDFGILLD-ALVAYE 258 (415)
T ss_pred eecCCCceEEEEeccccCCCCHHHHHH-HHHHHH
Confidence 00111346779999999999999999 998875
No 44
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.00 E-value=1.3e-08 Score=100.02 Aligned_cols=82 Identities=11% Similarity=0.001 Sum_probs=61.8
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHH-h--------CC-CCCceEEcCCCCCCcccccCC---------------------
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKL-W--------GI-PDRIKRVYPPCDTSGLQVLPL--------------------- 263 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~-~--------g~-~~~~~VIYPPvd~~~~~~~~~--------------------- 263 (298)
.+.+.+.+|.|+++|...++.+++. + +. +.++.||++-||.+.+.....
T Consensus 191 ~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~ 270 (466)
T PRK00654 191 LKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRA 270 (466)
T ss_pred HHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHH
Confidence 3456789999999999999999762 2 22 457899999999987752100
Q ss_pred -----C-CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 264 -----E-RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 264 -----~-~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
. ...+.+.++++||+.|+|+++++|+ |++++.+
T Consensus 271 l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~-a~~~l~~ 309 (466)
T PRK00654 271 LQERFGLPDDDAPLFAMVSRLTEQKGLDLVLE-ALPELLE 309 (466)
T ss_pred HHHHhCCCCCCCcEEEEeeccccccChHHHHH-HHHHHHh
Confidence 0 0012468999999999999999999 9988753
No 45
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.97 E-value=4.5e-08 Score=103.32 Aligned_cols=250 Identities=11% Similarity=0.049 Sum_probs=134.6
Q ss_pred hccCCCcEEEEEcCC---------CC---CCChHHHHHHHHHHHHHHhCCC-CeEEEEccCCCC-C--hh-----HHHHh
Q 022349 29 ARRNRTTSVAFFHPN---------TN---DGGGGERVLWCAVKAIQEESPD-LDCIVYTGDHDA-F--PD-----SLLAR 87 (298)
Q Consensus 29 ~~~~~~~~Va~~Hp~---------l~---~~GGaErV~~~l~~aL~~~~~~-~~v~iyT~~~~~-~--~~-----~~~~~ 87 (298)
-...+++.|+++... ++ ..||--+++.+++++|++.. + ++|.|||-..+. + ++ +.+..
T Consensus 164 ~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~-gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~ 242 (1050)
T TIGR02468 164 QQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMP-GVYRVDLLTRQVSSPDVDWSYGEPTEMLTP 242 (1050)
T ss_pred hcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCC-CCCEEEEEeCCcCccccccccCCccccccc
Confidence 344567888888652 11 23788899999999999963 3 488899964321 1 10 00000
Q ss_pred h-cccccee--ecCCCeEEEccccceeecccCCchhHHHHHHHHHHHHHH-HHh--------------ccCCcEEEeCCC
Q 022349 88 A-VDRFGVE--LLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWE-ALC--------------KFTPLYYFDTSG 149 (298)
Q Consensus 88 ~-~~~f~~~--l~~~~~~i~l~~~~~~~~~~~~~~~l~~~~l~~~~~a~~-~l~--------------~~~pDv~i~s~~ 149 (298)
. .+-+... ..+.++++.+..+ ++..+..-..+|..+..+.-.+. .+. ...||++|....
T Consensus 243 ~~~~~~~~~~~~~~g~rIvRip~G---P~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw 319 (1050)
T TIGR02468 243 RSSENDGDEMGESSGAYIIRIPFG---PRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYA 319 (1050)
T ss_pred cccccccccccCCCCeEEEEeccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcc
Confidence 0 0000000 1223344443321 11111112223444432211111 111 124999996543
Q ss_pred cccccc--cccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHH-HHHHHHHHhccCCcEEE
Q 022349 150 YAFTYP--LARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT-FFSWMYGLVGSCADLAM 226 (298)
Q Consensus 150 ~~~~~p--~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~-~~~~~~~~~~~~ad~vi 226 (298)
.+.... ++...+.|.|...|+-- .+..+.+...+.... + ..-..|.. -.....+++...||.||
T Consensus 320 ~sG~aa~~L~~~lgVP~V~T~HSLg--r~K~~~ll~~g~~~~--~---------~~~~~y~~~~Ri~~Ee~~l~~Ad~VI 386 (1050)
T TIGR02468 320 DAGDSAALLSGALNVPMVLTGHSLG--RDKLEQLLKQGRMSK--E---------EINSTYKIMRRIEAEELSLDASEIVI 386 (1050)
T ss_pred hHHHHHHHHHHhhCCCEEEECccch--hhhhhhhcccccccc--c---------ccccccchHHHHHHHHHHHHhcCEEE
Confidence 322222 12245889999999742 221111111110000 0 00001110 00113678899999999
Q ss_pred EcCHHHHHHHHHHhCC-----------------------CCCceEEcCCCCCCcccccCCC-------------------
Q 022349 227 VNSSWTQSHIEKLWGI-----------------------PDRIKRVYPPCDTSGLQVLPLE------------------- 264 (298)
Q Consensus 227 aNS~~Ta~~i~~~~g~-----------------------~~~~~VIYPPvd~~~~~~~~~~------------------- 264 (298)
|+|+.-++.+.+.|+- ..++.||+|-||.+.|......
T Consensus 387 asT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 387 TSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred EeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 9999999988888751 1278999999999988632000
Q ss_pred --------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 265 --------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 265 --------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
...+.++||+|||+.|+||++.+|+ ||+.++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIe-Af~~L~ 505 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVK-AFGECR 505 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHH-HHHHhH
Confidence 0112468999999999999999999 998875
No 46
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=98.94 E-value=4.3e-08 Score=96.04 Aligned_cols=82 Identities=12% Similarity=-0.027 Sum_probs=62.2
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHH---------hCC-CCCceEEcCCCCCCcccccCCC--------------------
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKL---------WGI-PDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~---------~g~-~~~~~VIYPPvd~~~~~~~~~~-------------------- 264 (298)
.+.+...+|.|+++|...++.+.+- ++. ..++.+|++.||.+.+......
T Consensus 204 ~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~ 283 (476)
T cd03791 204 LKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAA 283 (476)
T ss_pred HHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHH
Confidence 4566788999999999999998752 221 4689999999998877531000
Q ss_pred --------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 --------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 --------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...+.+.++++||+.++|+++++++ |+.++.+
T Consensus 284 l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~-a~~~l~~ 323 (476)
T cd03791 284 LQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLE-ALPELLE 323 (476)
T ss_pred HHHHcCCCcCCCCCEEEEEeeccccccHHHHHH-HHHHHHH
Confidence 0123578999999999999999999 9887653
No 47
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.93 E-value=3.1e-08 Score=95.85 Aligned_cols=81 Identities=21% Similarity=0.217 Sum_probs=62.8
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCccChHHHHHHHHH
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYY 293 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa 293 (298)
++...+++|.|+++|++.++.+.+. |. +.++.|+|+.+|.+.|...+.....++..++++||+.++|+++.+|+ |++
T Consensus 168 ~~~~~~~ad~vv~~S~~~~~~l~~~-g~~~~ki~vi~nGvd~~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll~-a~~ 245 (406)
T PRK15427 168 YQQLFRRGDLMLPISDLWAGRLQKM-GCPPEKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIE-ACR 245 (406)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCCHHHEEEcCCCCCHHHcCCCccccCCCCeEEEEEeCcchhcCHHHHHH-HHH
Confidence 3445678999999999999999885 65 45788999999998885321111111346999999999999999999 998
Q ss_pred hhhh
Q 022349 294 SYLD 297 (298)
Q Consensus 294 ~~~~ 297 (298)
++.+
T Consensus 246 ~l~~ 249 (406)
T PRK15427 246 QLKE 249 (406)
T ss_pred HHHh
Confidence 7753
No 48
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=98.87 E-value=9.2e-09 Score=84.04 Aligned_cols=154 Identities=19% Similarity=0.163 Sum_probs=73.4
Q ss_pred ChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhHHHHHHH
Q 022349 48 GGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFG 127 (298)
Q Consensus 48 GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l~~~~l~ 127 (298)
||+|+++.+++++|.+. ++++.++|...+... ... ....+.+..+.. .+.. ..+..+ ..+
T Consensus 1 GG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~----~~~-------~~~~~~~~~~~~----~~~~-~~~~~~-~~~- 60 (160)
T PF13579_consen 1 GGIERYVRELARALAAR--GHEVTVVTPQPDPED----DEE-------EEDGVRVHRLPL----PRRP-WPLRLL-RFL- 60 (160)
T ss_dssp SHHHHHHHHHHHHHHHT--T-EEEEEEE---GGG-----SE-------EETTEEEEEE------S-SS-SGGGHC-CHH-
T ss_pred CCHHHHHHHHHHHHHHC--CCEEEEEecCCCCcc----ccc-------ccCCceEEeccC----Cccc-hhhhhH-HHH-
Confidence 89999999999999998 577788875432111 000 011112222211 0100 011111 111
Q ss_pred HHHHHHH-HH--hccCCcEEEeCCCcccccc-ccc-ccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhH
Q 022349 128 SVYLSWE-AL--CKFTPLYYFDTSGYAFTYP-LAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQ 202 (298)
Q Consensus 128 ~~~~a~~-~l--~~~~pDv~i~s~~~~~~~p-~~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 202 (298)
..++ .+ +..+||+++.....+.... +++ ..+.|+|+-+|...... ...
T Consensus 61 ---~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------------------------~~~ 113 (160)
T PF13579_consen 61 ---RRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRR------------------------GSR 113 (160)
T ss_dssp ---HHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T------------------------------
T ss_pred ---HHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhh------------------------ccc
Confidence 1112 23 5678998885542211111 223 45899999999643100 001
Q ss_pred HHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCC
Q 022349 203 CKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (298)
Q Consensus 203 ~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPP 252 (298)
+ ..+++..++++..+.+|.++++|+.+++.+.+ +|. +.++.||++.
T Consensus 114 ~---~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 114 W---KRRLYRWLERRLLRRADRVIVVSEAMRRYLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp H---HHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH-H---GGGEEE----
T ss_pred h---hhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH-hCCCCCcEEEeCcC
Confidence 1 11223444678888999999999999999999 886 5688898863
No 49
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=98.86 E-value=1.3e-07 Score=92.94 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=62.0
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHH-hCC---------CCCceEEcCCCCCCcccccC----------------------
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKL-WGI---------PDRIKRVYPPCDTSGLQVLP---------------------- 262 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~-~g~---------~~~~~VIYPPvd~~~~~~~~---------------------- 262 (298)
.+.+...+|.|+++|...++++.+. +|. +.++.+|++.+|.+.+....
T Consensus 199 ~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~ 278 (473)
T TIGR02095 199 LKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEA 278 (473)
T ss_pred HHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHH
Confidence 4566789999999999999999763 221 35789999999998775210
Q ss_pred ------CCCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 263 ------LERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 263 ------~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.....+.+.++++||+.++|+++++|+ |++++.+
T Consensus 279 l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~-a~~~l~~ 318 (473)
T TIGR02095 279 LQEELGLPVDDDVPLFGVISRLTQQKGVDLLLA-ALPELLE 318 (473)
T ss_pred HHHHcCCCccCCCCEEEEEecCccccChHHHHH-HHHHHHH
Confidence 000012468999999999999999999 9988753
No 50
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.82 E-value=2.4e-07 Score=85.99 Aligned_cols=78 Identities=14% Similarity=-0.023 Sum_probs=57.2
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC-------CCCCCCCcEEEEEcCCCC--ccChHHHH
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPAIISVAQFRP--EKVRYKLI 288 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~iLsvgRl~p--~Kn~~l~I 288 (298)
...++.++++|+++++.+.+.++. ..++.|+++|+|.+.+.... .....+...++..|+... +|+++.++
T Consensus 133 ~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll 212 (365)
T cd03825 133 ADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELI 212 (365)
T ss_pred ccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHH
Confidence 467889999999999999998754 56899999999988764210 011111345556666654 89999999
Q ss_pred HHHHHhhhh
Q 022349 289 STRYYSYLD 297 (298)
Q Consensus 289 ~~Afa~~~~ 297 (298)
+ |++.+.+
T Consensus 213 ~-a~~~l~~ 220 (365)
T cd03825 213 E-ALKRLAE 220 (365)
T ss_pred H-HHHHhhh
Confidence 9 9887653
No 51
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.80 E-value=2.7e-07 Score=95.43 Aligned_cols=240 Identities=16% Similarity=0.128 Sum_probs=120.8
Q ss_pred CcEEEEEcCCC--CC--------CChHHHHHHHHHHHHHHh------CCCC----eEEEEccCCC-CChhHHHHhhcccc
Q 022349 34 TTSVAFFHPNT--ND--------GGGGERVLWCAVKAIQEE------SPDL----DCIVYTGDHD-AFPDSLLARAVDRF 92 (298)
Q Consensus 34 ~~~Va~~Hp~l--~~--------~GGaErV~~~l~~aL~~~------~~~~----~v~iyT~~~~-~~~~~~~~~~~~~f 92 (298)
.+|||++.+.- +. .||--.++.+++++|.+. ..|+ +|.|||-..+ ..+..|.+.++..-
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~ 334 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVY 334 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccccc
Confidence 46899877654 11 388888999999987421 2344 5678996431 11111111111110
Q ss_pred ceeecCCCeEEEccccce---eecccCCchhHHHHHHHHHHHHH-HHHh---ccCCcEEEeCCCcccccc--cccccCCe
Q 022349 93 GVELLHPPKVVHLYRRKW---IEESTYPRFTMIGQSFGSVYLSW-EALC---KFTPLYYFDTSGYAFTYP--LARIFGCR 163 (298)
Q Consensus 93 ~~~l~~~~~~i~l~~~~~---~~~~~~~~~~l~~~~l~~~~~a~-~~l~---~~~pDv~i~s~~~~~~~p--~~~~~~~~ 163 (298)
+ .+.++++.+..+.. ..+...+++.+ |..+..+.-.. +.+. ..+||++|.....+.... ++...+.|
T Consensus 335 ~---~~~~~I~rvp~g~~~~~~~~~~i~k~~l-~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgVP 410 (784)
T TIGR02470 335 G---TEHAWILRVPFRTENGIILRNWISRFEI-WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVT 410 (784)
T ss_pred C---CCceEEEEecCCCCcccccccccCHHHH-HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCCC
Confidence 0 11223333222110 11222233333 33332211111 1121 346999997654443333 22345788
Q ss_pred EEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHH-HHHHHhccCCcEEEEcCHHH----HHHHH-
Q 022349 164 VICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS-WMYGLVGSCADLAMVNSSWT----QSHIE- 237 (298)
Q Consensus 164 ~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~-~~~~~~~~~ad~viaNS~~T----a~~i~- 237 (298)
.+.-.|+.... ++ +..+..+. .....|..... .....+...||.|||+|..- .+.+.
T Consensus 411 ~v~t~HsL~~~----K~-~~~g~~~~------------~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q 473 (784)
T TIGR02470 411 QCTIAHALEKT----KY-PDSDIYWQ------------EFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ 473 (784)
T ss_pred EEEECCcchhh----cc-cccccccc------------cchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh
Confidence 77777875411 11 11111110 00011110000 11336788999999999632 22332
Q ss_pred ----------HHhCC-------CCCceEEcCCCCCCcccccCC-C---------------------------CCCCCcEE
Q 022349 238 ----------KLWGI-------PDRIKRVYPPCDTSGLQVLPL-E---------------------------RSTEYPAI 272 (298)
Q Consensus 238 ----------~~~g~-------~~~~~VIYPPvd~~~~~~~~~-~---------------------------~~~~~~~i 272 (298)
.+|++ +.++.||+|-+|.+.|..... . .+.+++.+
T Consensus 474 Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiI 553 (784)
T TIGR02470 474 YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPII 553 (784)
T ss_pred hhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEE
Confidence 12322 246789999999887752100 0 01124789
Q ss_pred EEEcCCCCccChHHHHHHHHHhh
Q 022349 273 ISVAQFRPEKVRYKLISTRYYSY 295 (298)
Q Consensus 273 LsvgRl~p~Kn~~l~I~~Afa~~ 295 (298)
++|||+.|.||++.+|+ ||++.
T Consensus 554 l~VGRL~~~KGid~LIe-A~~~l 575 (784)
T TIGR02470 554 FSMARLDRVKNLTGLVE-CYGRS 575 (784)
T ss_pred EEEeCCCccCCHHHHHH-HHHHh
Confidence 99999999999999999 99764
No 52
>PLN02316 synthase/transferase
Probab=98.79 E-value=6.9e-07 Score=94.63 Aligned_cols=218 Identities=14% Similarity=0.128 Sum_probs=125.6
Q ss_pred CCCcEEEEEc----CCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhc--cccc--e---e----e
Q 022349 32 NRTTSVAFFH----PNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAV--DRFG--V---E----L 96 (298)
Q Consensus 32 ~~~~~Va~~H----p~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~--~~f~--~---~----l 96 (298)
+.+|+|+++- |.. ..||---|+..|.++|++. +++|.|+|+.++.-...-...+. ..+. . . .
T Consensus 585 ~~pM~Il~VSsE~~P~a-KvGGLgDVV~sLp~ALa~~--Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 661 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIA-KVGGLGDVVTSLSRAVQDL--NHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGK 661 (1036)
T ss_pred CCCcEEEEEEcccCCCC-CcCcHHHHHHHHHHHHHHc--CCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEE
Confidence 4568999886 444 3599999999999999997 56777888765321100000011 0110 0 0 0
Q ss_pred cCCCeEEEccccc-ee-ecccC------CchhHHHHHHHHHHHHHHHHh--ccCCcEEEeCCCccccccc-cc-------
Q 022349 97 LHPPKVVHLYRRK-WI-EESTY------PRFTMIGQSFGSVYLSWEALC--KFTPLYYFDTSGYAFTYPL-AR------- 158 (298)
Q Consensus 97 ~~~~~~i~l~~~~-~~-~~~~~------~~~~l~~~~l~~~~~a~~~l~--~~~pDv~i~s~~~~~~~p~-~~------- 158 (298)
.+.+.+.-++... +. ....+ .+|..++++. .+.++ ..+|||+|....++...|. .+
T Consensus 662 ~~GV~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aa------le~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~ 735 (1036)
T PLN02316 662 VEGLSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAA------LEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYG 735 (1036)
T ss_pred ECCcEEEEEeccccccCCCCCCCchhHHHHHHHHHHHH------HHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhc
Confidence 1122222222110 00 00001 1222222221 22222 2479999965433333332 11
Q ss_pred ccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHH
Q 022349 159 IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEK 238 (298)
Q Consensus 159 ~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~ 238 (298)
..+.|+|.-+|... |. ... .+.....+|.|+++|...++.|.+
T Consensus 736 ~~~~p~V~TiHnl~---------------~~----------~n~------------lk~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 736 LSKARVVFTIHNLE---------------FG----------ANH------------IGKAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred cCCCCEEEEeCCcc---------------cc----------hhH------------HHHHHHHCCEEEeCCHHHHHHHHh
Confidence 13578899999754 11 000 123456799999999999999988
Q ss_pred HhCC---CCCceEEcCCCCCCccccc-----CCC-----------------------CCCCCcEEEEEcCCCCccChHHH
Q 022349 239 LWGI---PDRIKRVYPPCDTSGLQVL-----PLE-----------------------RSTEYPAIISVAQFRPEKVRYKL 287 (298)
Q Consensus 239 ~~g~---~~~~~VIYPPvd~~~~~~~-----~~~-----------------------~~~~~~~iLsvgRl~p~Kn~~l~ 287 (298)
.+.+ ..++.||++.||++.+... +.. ...+.+.+++||||.++|+++++
T Consensus 779 ~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlL 858 (1036)
T PLN02316 779 NSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLI 858 (1036)
T ss_pred ccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHH
Confidence 6553 3678999999998865421 000 00123688999999999999999
Q ss_pred HHHHHHhhh
Q 022349 288 ISTRYYSYL 296 (298)
Q Consensus 288 I~~Afa~~~ 296 (298)
|+ |+.+++
T Consensus 859 i~-Al~~ll 866 (1036)
T PLN02316 859 KH-AIWRTL 866 (1036)
T ss_pred HH-HHHHHh
Confidence 99 998765
No 53
>PLN02275 transferase, transferring glycosyl groups
Probab=98.78 E-value=3.8e-07 Score=87.01 Aligned_cols=83 Identities=19% Similarity=0.311 Sum_probs=61.7
Q ss_pred HHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC---CCCCCcEEEEEcCCCCccChH
Q 022349 209 TFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE---RSTEYPAIISVAQFRPEKVRY 285 (298)
Q Consensus 209 ~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~---~~~~~~~iLsvgRl~p~Kn~~ 285 (298)
+++.++.++..+.+|.++++|+..++.+.+.+| .++.|||+.+ .+.+...... ...+...++++||+.++|+++
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~~g--~~i~vi~n~~-~~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~~ 229 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQNWG--IRATVLYDQP-PEFFRPASLEIRLRPNRPALVVSSTSWTPDEDFG 229 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcC--CCeEEECCCC-HHHcCcCCchhcccCCCcEEEEEeCceeccCCHH
Confidence 344555777888999999999999999998887 4488998874 4555421111 011134678999999999999
Q ss_pred HHHHHHHHhh
Q 022349 286 KLISTRYYSY 295 (298)
Q Consensus 286 l~I~~Afa~~ 295 (298)
.+++ |++.+
T Consensus 230 ~li~-a~~~l 238 (371)
T PLN02275 230 ILLE-AAVMY 238 (371)
T ss_pred HHHH-HHHHH
Confidence 9999 98876
No 54
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.77 E-value=1.9e-07 Score=89.40 Aligned_cols=75 Identities=15% Similarity=0.099 Sum_probs=59.0
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC-------CCCCCCcEEEEEcCCCCccChHHHHHHHHH
Q 022349 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------ERSTEYPAIISVAQFRPEKVRYKLISTRYY 293 (298)
Q Consensus 221 ~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~-------~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa 293 (298)
+++.++++|+++++.+.+.++ ..++.|||+++|.+.+..... ....++..++++||+.++|+++.+|+ |++
T Consensus 139 ~~~~ii~~S~~~~~~~~~~~~-~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~-A~~ 216 (380)
T PRK15484 139 KNAKIIVPSQFLKKFYEERLP-NADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQ-AFE 216 (380)
T ss_pred cCCEEEEcCHHHHHHHHhhCC-CCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHH-HHH
Confidence 579999999999999998765 467899999999877753110 00112468999999999999999999 999
Q ss_pred hhhh
Q 022349 294 SYLD 297 (298)
Q Consensus 294 ~~~~ 297 (298)
++++
T Consensus 217 ~l~~ 220 (380)
T PRK15484 217 KLAT 220 (380)
T ss_pred HHHH
Confidence 8753
No 55
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.77 E-value=3e-07 Score=91.59 Aligned_cols=76 Identities=17% Similarity=0.145 Sum_probs=60.0
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCC---------CC--CCCCcEEEEEcCCCCccChHH
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPL---------ER--STEYPAIISVAQFRPEKVRYK 286 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~---------~~--~~~~~~iLsvgRl~p~Kn~~l 286 (298)
.+.+| +++||..+++.+.+.++. +.++.|||+.+|++.|..... .. ..+...+.++|||.+.||++.
T Consensus 337 ~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~ 415 (578)
T PRK15490 337 VPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFA 415 (578)
T ss_pred Eecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHH
Confidence 56677 889999999999999987 668999999999887753110 00 112357889999999999999
Q ss_pred HHHHHHHhhh
Q 022349 287 LISTRYYSYL 296 (298)
Q Consensus 287 ~I~~Afa~~~ 296 (298)
+|+ |+++++
T Consensus 416 LI~-A~a~ll 424 (578)
T PRK15490 416 WID-FAARYL 424 (578)
T ss_pred HHH-HHHHHH
Confidence 999 998764
No 56
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.72 E-value=5.7e-07 Score=86.21 Aligned_cols=80 Identities=9% Similarity=-0.113 Sum_probs=62.2
Q ss_pred HHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCC---CCCCcEEEEEcCCCCccChH
Q 022349 210 FFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER---STEYPAIISVAQFRPEKVRY 285 (298)
Q Consensus 210 ~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~---~~~~~~iLsvgRl~p~Kn~~ 285 (298)
.+...++.+.+++|.+++.|+.+++.+++.++. +.++.||++.||.+.|....... ..+...++++||+.++||++
T Consensus 161 ~~~~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~~~~~~~~~ilf~G~l~~~k~~~ 240 (397)
T TIGR03087 161 LLLAYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPNPYPPGKRVLVFTGAMDYWPNID 240 (397)
T ss_pred HHHHHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccCCCCCCCcEEEEEEecCCccCHH
Confidence 344556778899999999999999999988653 46789999999998875321111 11136899999999999999
Q ss_pred HHHH
Q 022349 286 KLIS 289 (298)
Q Consensus 286 l~I~ 289 (298)
.++.
T Consensus 241 ~l~~ 244 (397)
T TIGR03087 241 AVVW 244 (397)
T ss_pred HHHH
Confidence 9884
No 57
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.70 E-value=3.7e-07 Score=86.02 Aligned_cols=202 Identities=10% Similarity=0.063 Sum_probs=108.1
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
|||.|+- . +.||+|++..+++++|++. ++++.+.+...+... ...++ .+.+ +..+.........
T Consensus 2 ~~i~i~~--~-g~gG~~~~~~~la~~L~~~--g~ev~vv~~~~~~~~----~~~~~-~g~~------~~~~~~~~~~~~~ 65 (357)
T PRK00726 2 KKILLAG--G-GTGGHVFPALALAEELKKR--GWEVLYLGTARGMEA----RLVPK-AGIE------FHFIPSGGLRRKG 65 (357)
T ss_pred cEEEEEc--C-cchHhhhHHHHHHHHHHhC--CCEEEEEECCCchhh----hcccc-CCCc------EEEEeccCcCCCC
Confidence 4555543 2 3489999999999999987 577777664321101 11111 1222 2222110000000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-c-ccccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
...+....++.+..+....+.+++.+||+++..+...+... + ++..+.|+++++|...
T Consensus 66 ~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~-------------------- 125 (357)
T PRK00726 66 SLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAV-------------------- 125 (357)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCC--------------------
Confidence 00011112222223333344467788999998754433222 2 2345778887665322
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC----CCCCC
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL----ERSTE 268 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~----~~~~~ 268 (298)
.+.. .++..+.+|.+++.|.-+. .+. + ++++.|+++|++.+.+..... ....+
T Consensus 126 -------~~~~-----------~r~~~~~~d~ii~~~~~~~---~~~-~-~~~i~vi~n~v~~~~~~~~~~~~~~~~~~~ 182 (357)
T PRK00726 126 -------PGLA-----------NKLLARFAKKVATAFPGAF---PEF-F-KPKAVVTGNPVREEILALAAPPARLAGREG 182 (357)
T ss_pred -------ccHH-----------HHHHHHHhchheECchhhh---hcc-C-CCCEEEECCCCChHhhcccchhhhccCCCC
Confidence 0000 1223446899999987432 222 2 578999999999775542110 01112
Q ss_pred CcEEEEEcCCCCccChHHHH-HHHHHhhh
Q 022349 269 YPAIISVAQFRPEKVRYKLI-STRYYSYL 296 (298)
Q Consensus 269 ~~~iLsvgRl~p~Kn~~l~I-~~Afa~~~ 296 (298)
+..++.+|+..+.|++..++ + |++++.
T Consensus 183 ~~~i~~~gg~~~~~~~~~~l~~-a~~~~~ 210 (357)
T PRK00726 183 KPTLLVVGGSQGARVLNEAVPE-ALALLP 210 (357)
T ss_pred CeEEEEECCcHhHHHHHHHHHH-HHHHhh
Confidence 46788999999999876555 8 887764
No 58
>PRK14099 glycogen synthase; Provisional
Probab=98.62 E-value=2.9e-06 Score=84.09 Aligned_cols=81 Identities=15% Similarity=0.001 Sum_probs=61.4
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHh-C--------C-CCCceEEcCCCCCCcccccCC---------------------
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLW-G--------I-PDRIKRVYPPCDTSGLQVLPL--------------------- 263 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~-g--------~-~~~~~VIYPPvd~~~~~~~~~--------------------- 263 (298)
.+++.+.+|.|+++|...++.+++.+ | . ..++.||++-||++.+.....
T Consensus 203 ~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~ 282 (485)
T PRK14099 203 LKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAA 282 (485)
T ss_pred HHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHH
Confidence 45677889999999999999998743 1 1 357899999999887742100
Q ss_pred -------CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 264 -------ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 264 -------~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
..+....++.+|||+.++|+++++|+ |+.+++
T Consensus 283 l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~-A~~~l~ 321 (485)
T PRK14099 283 LQARFGLDPDPDALLLGVISRLSWQKGLDLLLE-ALPTLL 321 (485)
T ss_pred HHHHcCCCcccCCcEEEEEecCCccccHHHHHH-HHHHHH
Confidence 00011357779999999999999999 998765
No 59
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.61 E-value=1.1e-06 Score=82.18 Aligned_cols=193 Identities=12% Similarity=0.115 Sum_probs=103.1
Q ss_pred CCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhHHHH
Q 022349 45 NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (298)
Q Consensus 45 ~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l~~~ 124 (298)
+..||.++++.+++++|.+. ++++.+.|....... ...+ ..+.+ +..+..........+.++.-.+.
T Consensus 7 ~~~gG~~~~~~~la~~l~~~--G~ev~v~~~~~~~~~----~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 73 (350)
T cd03785 7 GGTGGHIFPALALAEELRER--GAEVLFLGTKRGLEA----RLVP-KAGIP------LHTIPVGGLRRKGSLKKLKAPFK 73 (350)
T ss_pred cCchhhhhHHHHHHHHHHhC--CCEEEEEECCCcchh----hccc-ccCCc------eEEEEecCcCCCChHHHHHHHHH
Confidence 34689999999999999987 466677765321110 0010 01111 22211100000000000111111
Q ss_pred HHHHHHHHHHHHhccCCcEEEeCCCcccccc--c-ccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhh
Q 022349 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLS 201 (298)
Q Consensus 125 ~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 201 (298)
.+.......+.+++.+||+++.+++.+ ..+ + ++..+.|.+++.|... ..
T Consensus 74 ~~~~~~~~~~~i~~~~pDvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~---------------------------~~ 125 (350)
T cd03785 74 LLKGVLQARKILKKFKPDVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAV---------------------------PG 125 (350)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCC---------------------------cc
Confidence 111111223346778899999765433 222 1 2345778876655422 00
Q ss_pred HHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC----CCCCCCCcEEEEEcC
Q 022349 202 QCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTEYPAIISVAQ 277 (298)
Q Consensus 202 ~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~----~~~~~~~~~iLsvgR 277 (298)
.. .++..+.+|.|++.|...++. +. +.++.++++|++.+.+...+ +....++..++++|+
T Consensus 126 ~~-----------~~~~~~~~~~vi~~s~~~~~~----~~-~~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~g 189 (350)
T cd03785 126 LA-----------NRLLARFADRVALSFPETAKY----FP-KDKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFGG 189 (350)
T ss_pred HH-----------HHHHHHhhCEEEEcchhhhhc----CC-CCcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEECC
Confidence 00 122344689999999998876 22 47889999999977654211 111122467889999
Q ss_pred CCCccChH-HHHHHHHHhh
Q 022349 278 FRPEKVRY-KLISTRYYSY 295 (298)
Q Consensus 278 l~p~Kn~~-l~I~~Afa~~ 295 (298)
..+.|+.+ ++++ |.+.+
T Consensus 190 ~~~~~~~~~~l~~-a~~~l 207 (350)
T cd03785 190 SQGARAINEAVPE-ALAEL 207 (350)
T ss_pred cHhHHHHHHHHHH-HHHHh
Confidence 88888875 4557 77655
No 60
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.53 E-value=9.2e-07 Score=87.21 Aligned_cols=143 Identities=15% Similarity=0.070 Sum_probs=93.3
Q ss_pred cCCcEEEeCCCcccccc--c-ccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhch-hhhHHHHHHHHHHHHH
Q 022349 139 FTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSN-WLSQCKIVYYTFFSWM 214 (298)
Q Consensus 139 ~~pDv~i~s~~~~~~~p--~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~-~~~~~k~~y~~~~~~~ 214 (298)
.++|++|..+......+ + ++..+.|.|.-.|.-. ..+ +.. .+.... .....+..+.+++..+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~-~~e--~~~-----------~~~~~~~~~~~~~~~~~~~~~~l 237 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIY-TRE--RKI-----------ELLQADWEMSYFRRLWIRFFESL 237 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCcc-HHH--HHH-----------HHHhcccchHHHHHHHHHHHHHH
Confidence 45789986532111111 1 2245789999899522 100 000 000000 0223455566677777
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCC-CCCCCcEEEEEcCCCCccChHHHHHHHH
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLE-RSTEYPAIISVAQFRPEKVRYKLISTRY 292 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~-~~~~~~~iLsvgRl~p~Kn~~l~I~~Af 292 (298)
.+.+++.||.|++.|+.+++...+ +|. +.++.|||+++|.+.+...+.. ...+...++++||+.|.|+++.+|+ |+
T Consensus 238 ~~~~~~~ad~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~-a~ 315 (475)
T cd03813 238 GRLAYQAADRITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIR-AA 315 (475)
T ss_pred HHHHHHhCCEEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCccccccCCCCcEEEEEeccccccCHHHHHH-HH
Confidence 788899999999999999987665 464 5678999999999888643211 1122568999999999999999999 99
Q ss_pred Hhhhh
Q 022349 293 YSYLD 297 (298)
Q Consensus 293 a~~~~ 297 (298)
+.+++
T Consensus 316 ~~l~~ 320 (475)
T cd03813 316 AIVRK 320 (475)
T ss_pred HHHHH
Confidence 87754
No 61
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.46 E-value=2.4e-06 Score=80.47 Aligned_cols=133 Identities=17% Similarity=0.095 Sum_probs=85.8
Q ss_pred cCCcEEEeCCCccccccccc-ccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHH
Q 022349 139 FTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGL 217 (298)
Q Consensus 139 ~~pDv~i~s~~~~~~~p~~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 217 (298)
.++|++|.+.......++.. ..+.+.+.++|....... ... ....++..+...+ .
T Consensus 98 ~~~diii~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-----------~~~--------~~~~~~~~~~~~~-----~ 153 (372)
T cd04949 98 TKPDVFILDRPTLDGQALLNMKKAAKVVVVLHSNHVSDN-----------NDP--------VHSLINNFYEYVF-----E 153 (372)
T ss_pred CCCCEEEECCccccchhHHhccCCceEEEEEChHHhCCc-----------ccc--------cccccchhhHHHH-----h
Confidence 67898886654433332322 235677889997552100 000 0011222332222 2
Q ss_pred hccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 218 VGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 218 ~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..+++|.+++.|+.+++.+.+.++...++.||+++++.+.+...+...+ ++..++++||+.++|+++.+|+ |+.++++
T Consensus 154 ~~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~~~~~-~~~~i~~vgrl~~~K~~~~li~-a~~~l~~ 231 (372)
T cd04949 154 NLDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQFKQR-KPHKIITVARLAPEKQLDQLIK-AFAKVVK 231 (372)
T ss_pred ChhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhcccchhhc-CCCeEEEEEccCcccCHHHHHH-HHHHHHH
Confidence 3578999999999999999999984334788899998776652111121 2578999999999999999999 9998754
No 62
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.34 E-value=3.2e-06 Score=81.72 Aligned_cols=79 Identities=16% Similarity=0.145 Sum_probs=63.8
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCccChHHHHHHHHHh
Q 022349 216 GLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYYS 294 (298)
Q Consensus 216 ~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~ 294 (298)
+.+.+.+|.++++|+..++.+++.|+. ..++.|+|.+++.+.+... ....++..++++||+.+.|+++.+|+ |+++
T Consensus 178 ~~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~--~~~~~~~~il~~Grl~~~Kg~~~li~-a~~~ 254 (407)
T cd04946 178 RYLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISK--PSKDDTLRIVSCSYLVPVKRVDLIIK-ALAA 254 (407)
T ss_pred HHHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCC--CCCCCCEEEEEeeccccccCHHHHHH-HHHH
Confidence 345678999999999999999999985 5677899999988766422 11122568999999999999999999 9998
Q ss_pred hhh
Q 022349 295 YLD 297 (298)
Q Consensus 295 ~~~ 297 (298)
+.+
T Consensus 255 l~~ 257 (407)
T cd04946 255 LAK 257 (407)
T ss_pred HHH
Confidence 754
No 63
>PLN00142 sucrose synthase
Probab=98.33 E-value=4.3e-06 Score=86.77 Aligned_cols=81 Identities=20% Similarity=0.166 Sum_probs=55.6
Q ss_pred HHHhccCCcEEEEcCHHHHHHH----H--------------HHh-CC---CCCceEEcCCCCCCcccccC-----C----
Q 022349 215 YGLVGSCADLAMVNSSWTQSHI----E--------------KLW-GI---PDRIKRVYPPCDTSGLQVLP-----L---- 263 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i----~--------------~~~-g~---~~~~~VIYPPvd~~~~~~~~-----~---- 263 (298)
...+...||.|||+|..-...+ . ++. |+ ..++.||.|-+|.+.|.... .
T Consensus 469 E~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~ 548 (815)
T PLN00142 469 DLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLH 548 (815)
T ss_pred HHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhc
Confidence 4567889999999996655322 1 111 11 23778999999988775210 0
Q ss_pred -----------------C--CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 264 -----------------E--RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 264 -----------------~--~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
. ...+.+.++++||+.|+||++.+|+ ||++..
T Consensus 549 n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIe-A~a~l~ 599 (815)
T PLN00142 549 PSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVE-WYGKNK 599 (815)
T ss_pred ccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHH-HHHHHH
Confidence 0 0112468999999999999999999 998653
No 64
>PRK14098 glycogen synthase; Provisional
Probab=98.32 E-value=2.4e-05 Score=77.69 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=62.2
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHH----hCC-------CCCceEEcCCCCCCcccccCCC-------------------
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKL----WGI-------PDRIKRVYPPCDTSGLQVLPLE------------------- 264 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~----~g~-------~~~~~VIYPPvd~~~~~~~~~~------------------- 264 (298)
.+.+...||.|+++|...++.|++. +|+ +.+..+|++.||++.+......
T Consensus 214 lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~ 293 (489)
T PRK14098 214 LYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKK 293 (489)
T ss_pred HHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHH
Confidence 3456788999999999999999862 332 3578999999999877521000
Q ss_pred ---------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 ---------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 ---------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...+.+.++++||+.++|+++++|+ |+.++++
T Consensus 294 ~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~-a~~~l~~ 334 (489)
T PRK14098 294 ALLEEVGLPFDEETPLVGVIINFDDFQGAELLAE-SLEKLVE 334 (489)
T ss_pred HHHHHhCCCCccCCCEEEEeccccccCcHHHHHH-HHHHHHh
Confidence 0012358999999999999999999 9988753
No 65
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.31 E-value=2.1e-05 Score=77.42 Aligned_cols=225 Identities=12% Similarity=-0.013 Sum_probs=109.5
Q ss_pred CCCcEEEEEcC-CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChh-------------HHHH-hhccccceee
Q 022349 32 NRTTSVAFFHP-NTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPD-------------SLLA-RAVDRFGVEL 96 (298)
Q Consensus 32 ~~~~~Va~~Hp-~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~-------------~~~~-~~~~~f~~~l 96 (298)
++|||||||-+ ++-..+|.-.-....+..|.+.+. ++|.++.+......+ .-.+ .++++.+.
T Consensus 2 ~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~-- 78 (462)
T PLN02846 2 QKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEE-- 78 (462)
T ss_pred CCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhhhhhhhhccC--
Confidence 57899999977 666678887777788889988741 566776653211000 0000 00111010
Q ss_pred cCCCeEEEccccceeecccCCc-hhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc---c-ccc--CCeEEEEee
Q 022349 97 LHPPKVVHLYRRKWIEESTYPR-FTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---A-RIF--GCRVICYTH 169 (298)
Q Consensus 97 ~~~~~~i~l~~~~~~~~~~~~~-~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~---~-~~~--~~~~i~Y~H 169 (298)
++..+. .+..+ .+|. +..-.+.+....-..+.+++.+||+++-... +.+.. + +.. -.+++...|
T Consensus 79 ----~v~r~~--s~~~p-~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP--~~LG~~~~g~~~~~k~~~vV~tyH 149 (462)
T PLN02846 79 ----RISFLP--KFSIK-FYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEP--EHLTWYHHGKRWKTKFRLVIGIVH 149 (462)
T ss_pred ----eEEEec--ccccc-cCcccccccccccCChHHHHHHHHhcCCCEEEEcCc--hhhhhHHHHHHHHhcCCcEEEEEC
Confidence 111111 11111 1222 1110011101111234467789999986543 44443 1 111 133666788
Q ss_pred cCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEE
Q 022349 170 YPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV 249 (298)
Q Consensus 170 ~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VI 249 (298)
+.. ..|+ .... .+..+.++.+....+..+. .+|.+++.|..+++ +.+ +..+.
T Consensus 150 T~y-----~~Y~-------------~~~~-~g~~~~~l~~~~~~~~~r~--~~d~vi~pS~~~~~-l~~------~~i~~ 201 (462)
T PLN02846 150 TNY-----LEYV-------------KREK-NGRVKAFLLKYINSWVVDI--YCHKVIRLSAATQD-YPR------SIICN 201 (462)
T ss_pred CCh-----HHHH-------------HHhc-cchHHHHHHHHHHHHHHHH--hcCEEEccCHHHHH-Hhh------CEEec
Confidence 833 1222 1110 0111222223222222222 38999999986655 332 11111
Q ss_pred cCCCCCCcccccCC--C--CCCCC---cEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 250 YPPCDTSGLQVLPL--E--RSTEY---PAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 250 YPPvd~~~~~~~~~--~--~~~~~---~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
-..||.+.|..... . ....+ +.+++|||+.++||++.+|+ ||+.+.+
T Consensus 202 v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~-a~~~l~~ 255 (462)
T PLN02846 202 VHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLK-LLHKHQK 255 (462)
T ss_pred CceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHH-HHHHHHh
Confidence 14666665542100 0 00112 35889999999999999999 9987653
No 66
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.29 E-value=1.7e-05 Score=74.06 Aligned_cols=71 Identities=11% Similarity=0.068 Sum_probs=47.2
Q ss_pred HhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc----CCCCCCCCcEEEEEcCCCCccChH-HHHHHH
Q 022349 217 LVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----PLERSTEYPAIISVAQFRPEKVRY-KLISTR 291 (298)
Q Consensus 217 ~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~----~~~~~~~~~~iLsvgRl~p~Kn~~-l~I~~A 291 (298)
+..+.+|.+++.|..+++.+ +..|+++|++.+.+... ......++..++++||..+.|++. ++++ |
T Consensus 131 ~~~~~~d~ii~~~~~~~~~~--------~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~-a 201 (348)
T TIGR01133 131 LLSRFAKKVLISFPGAKDHF--------EAVLVGNPVRQEIRSLPVPRERFGLREGKPTILVLGGSQGAKILNELVPK-A 201 (348)
T ss_pred HHHHHhCeeEECchhHhhcC--------CceEEcCCcCHHHhcccchhhhcCCCCCCeEEEEECCchhHHHHHHHHHH-H
Confidence 34567999999999887654 23689999986544211 000111246788999999999965 4567 8
Q ss_pred HHhhh
Q 022349 292 YYSYL 296 (298)
Q Consensus 292 fa~~~ 296 (298)
++++.
T Consensus 202 ~~~l~ 206 (348)
T TIGR01133 202 LAKLA 206 (348)
T ss_pred HHHHh
Confidence 77653
No 67
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.22 E-value=2.6e-05 Score=77.62 Aligned_cols=137 Identities=9% Similarity=0.031 Sum_probs=80.8
Q ss_pred HHHhccCCcEEEeCCCccccccccc-ccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHH
Q 022349 134 EALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFS 212 (298)
Q Consensus 134 ~~l~~~~pDv~i~s~~~~~~~p~~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~ 212 (298)
+.|...++|++|..-+.....++.. ..++|.+..+|.-.++.. ..+ . ... ++...+.
T Consensus 205 ~~L~~~~~di~i~dr~~~~~~~~~~~~~~~~~v~~lH~~h~~~~-----------~~~-----~---~~~---~~~~~y~ 262 (500)
T TIGR02918 205 KQLNLTKKDIIILDRSTGIGQAVLENKGPAKLGVVVHAEHFSES-----------ATN-----E---TYI---LWNNYYE 262 (500)
T ss_pred HHHhCCCCCEEEEcCCcccchHHHhcCCCceEEEEEChhhhcCc-----------cCc-----c---hhH---HHHHHHH
Confidence 3454567897775433322223332 347888999997552110 000 0 000 1111121
Q ss_pred HHHHHhccCCcEEEEcCHHHHHHHHHHhCC----CCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCccChHHHH
Q 022349 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGI----PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLI 288 (298)
Q Consensus 213 ~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~----~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~l~I 288 (298)
... ..++.+|.+|+.|++.++.+.+.++. ..++.+++..++.+.+. +...+ +...++++||+.|+|+++.+|
T Consensus 263 ~~~-~~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~--~~~~r-~~~~il~vGrl~~~Kg~~~li 338 (500)
T TIGR02918 263 YQF-SNADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQY--PEQER-KPFSIITASRLAKEKHIDWLV 338 (500)
T ss_pred HHH-hchhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccC--ccccc-CCeEEEEEeccccccCHHHHH
Confidence 111 23678999999999999999887752 23456665554433222 21222 135799999999999999999
Q ss_pred HHHHHhhhh
Q 022349 289 STRYYSYLD 297 (298)
Q Consensus 289 ~~Afa~~~~ 297 (298)
+ |++++.+
T Consensus 339 ~-A~~~l~~ 346 (500)
T TIGR02918 339 K-AVVKAKK 346 (500)
T ss_pred H-HHHHHHh
Confidence 9 9988753
No 68
>PHA01630 putative group 1 glycosyl transferase
Probab=98.13 E-value=1.2e-05 Score=76.00 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=57.7
Q ss_pred ccCCcEEEEcCHHHHHHHHHHh-CCCCCceEEcCCCCCCcccccCCCCCCCCcEEE-EEcCCCCccChHHHHHHHHHhhh
Q 022349 219 GSCADLAMVNSSWTQSHIEKLW-GIPDRIKRVYPPCDTSGLQVLPLERSTEYPAII-SVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~-g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iL-svgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.+++|.++++|+++++.+.+.. +.+.++.|||++||.+.|.....+ .+.++++ ++||+.++||++.+|+ |++++.
T Consensus 92 ~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~~--~~~~~vl~~~g~~~~~Kg~d~Li~-A~~~l~ 168 (331)
T PHA01630 92 NQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPKE--KPHPCVLAILPHSWDRKGGDIVVK-IFHELQ 168 (331)
T ss_pred hccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCccc--cCCCEEEEEeccccccCCHHHHHH-HHHHHH
Confidence 5789999999999999998762 113578999999998877632111 1234444 6678899999999999 998875
Q ss_pred h
Q 022349 297 D 297 (298)
Q Consensus 297 ~ 297 (298)
+
T Consensus 169 ~ 169 (331)
T PHA01630 169 N 169 (331)
T ss_pred h
Confidence 3
No 69
>PHA01633 putative glycosyl transferase group 1
Probab=98.07 E-value=1.5e-05 Score=75.39 Aligned_cols=76 Identities=9% Similarity=0.062 Sum_probs=55.8
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC---------CCCC-CCCcEEEEEcCCCCccChHHHH
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP---------LERS-TEYPAIISVAQFRPEKVRYKLI 288 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~---------~~~~-~~~~~iLsvgRl~p~Kn~~l~I 288 (298)
+.+.+.+|+||++|++++++. |.+.+ .+|++.+|.+.|.+.. +... .+...++++||+.++||++.+|
T Consensus 90 m~~~~~vIavS~~t~~~L~~~-G~~~~-i~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI 167 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV-GLQVD-LPVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLML 167 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh-CCCCc-eeeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHH
Confidence 344668999999999999986 54334 4678899988775311 0000 1235788999999999999999
Q ss_pred HHHHHhhhh
Q 022349 289 STRYYSYLD 297 (298)
Q Consensus 289 ~~Afa~~~~ 297 (298)
+ |++++++
T Consensus 168 ~-A~~~L~~ 175 (335)
T PHA01633 168 Q-VFNELNT 175 (335)
T ss_pred H-HHHHHHH
Confidence 9 9998753
No 70
>PLN02939 transferase, transferring glycosyl groups
Probab=98.06 E-value=0.001 Score=70.15 Aligned_cols=78 Identities=12% Similarity=0.108 Sum_probs=58.6
Q ss_pred hccCCcEEEEcCHHHHHHHHHHhC--------C-CCCceEEcCCCCCCcccccC--------------------------
Q 022349 218 VGSCADLAMVNSSWTQSHIEKLWG--------I-PDRIKRVYPPCDTSGLQVLP-------------------------- 262 (298)
Q Consensus 218 ~~~~ad~viaNS~~Ta~~i~~~~g--------~-~~~~~VIYPPvd~~~~~~~~-------------------------- 262 (298)
..-.+|.|++.|..-++.|.+.+| . +.+..+|++-||++.+.+..
T Consensus 690 GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRke 769 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQ 769 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHH
Confidence 344699999999999999987443 1 45789999999988765210
Q ss_pred --CCCC-CCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 263 --LERS-TEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 263 --~~~~-~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.... .+.+.+++|||+.++|+++++++ |+.+++
T Consensus 770 lGL~~~d~d~pLIg~VGRL~~QKGiDlLle-A~~~Ll 805 (977)
T PLN02939 770 LGLSSADASQPLVGCITRLVPQKGVHLIRH-AIYKTA 805 (977)
T ss_pred hCCCcccccceEEEEeecCCcccChHHHHH-HHHHHh
Confidence 0000 11368999999999999999999 987654
No 71
>PLN02501 digalactosyldiacylglycerol synthase
Probab=97.99 E-value=6.4e-05 Score=76.68 Aligned_cols=132 Identities=11% Similarity=-0.058 Sum_probs=74.9
Q ss_pred HHHHhccCCcEEEeCCCcccccccc-------cccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHH
Q 022349 133 WEALCKFTPLYYFDTSGYAFTYPLA-------RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKI 205 (298)
Q Consensus 133 ~~~l~~~~pDv~i~s~~~~~~~p~~-------~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~ 205 (298)
.+.+...+|||+|-... +.+... +..+ |+|.-+|+.. . . |+.... .+.++.
T Consensus 427 ~~~L~~f~PDVVHLatP--~~LGw~~~Glr~ArKl~-PVVasyHTny-~----e-------------Yl~~y~-~g~L~~ 484 (794)
T PLN02501 427 SQFIPSKDADIAILEEP--EHLNWYHHGKRWTDKFN-HVVGVVHTNY-L----E-------------YIKREK-NGALQA 484 (794)
T ss_pred HHHhhccCCCEEEECCc--hhhccHHHHHHHHHHcC-CeEEEEeCCc-H----H-------------HHhHhc-chhHHH
Confidence 34567889998885432 223322 2234 7888899865 1 1 222211 123333
Q ss_pred HHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC-------CCCCCCCcEEEEEcCC
Q 022349 206 VYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP-------LERSTEYPAIISVAQF 278 (298)
Q Consensus 206 ~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~iLsvgRl 278 (298)
+.++....+..++. +|.|++-|..+++ +.+ .-+..+ .-||++.|.... +......+.++++||+
T Consensus 485 ~llk~l~~~v~r~h--cD~VIaPS~atq~-L~~-----~vI~nV-nGVDte~F~P~~r~~~~r~lgi~~~~kgiLfVGRL 555 (794)
T PLN02501 485 FFVKHINNWVTRAY--CHKVLRLSAATQD-LPK-----SVICNV-HGVNPKFLKIGEKVAEERELGQQAFSKGAYFLGKM 555 (794)
T ss_pred HHHHHHHHHHHHhh--CCEEEcCCHHHHH-hcc-----cceeec-ccccccccCCcchhHHHHhcCCccccCceEEEEcc
Confidence 33333322233333 8999999988884 321 111112 488887775311 0000112458999999
Q ss_pred CCccChHHHHHHHHHhhh
Q 022349 279 RPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 279 ~p~Kn~~l~I~~Afa~~~ 296 (298)
.++||++.+|+ |++.+.
T Consensus 556 a~EKGld~LLe-Ala~L~ 572 (794)
T PLN02501 556 VWAKGYRELID-LLAKHK 572 (794)
T ss_pred cccCCHHHHHH-HHHHHH
Confidence 99999999999 998764
No 72
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=97.87 E-value=5.1e-05 Score=76.00 Aligned_cols=81 Identities=10% Similarity=0.033 Sum_probs=62.7
Q ss_pred HHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC---------------C-----CC----CCCC
Q 022349 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP---------------L-----ER----STEY 269 (298)
Q Consensus 214 ~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~---------------~-----~~----~~~~ 269 (298)
++++++..||.|+|.|+.|++.+..+|+.+.+. ||++-+|++.|.... . .. ..++
T Consensus 219 iE~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~ 297 (590)
T cd03793 219 IERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK 297 (590)
T ss_pred HHHHHHhhCCEEEECChHHHHHHHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence 467889999999999999999999999963333 999999998875321 0 00 0123
Q ss_pred cEEEE-EcCCCC-ccChHHHHHHHHHhhh
Q 022349 270 PAIIS-VAQFRP-EKVRYKLISTRYYSYL 296 (298)
Q Consensus 270 ~~iLs-vgRl~p-~Kn~~l~I~~Afa~~~ 296 (298)
..+++ +||++. +|.+|.+|| |++++-
T Consensus 298 tli~f~~GR~e~~nKGiDvlIe-Al~rLn 325 (590)
T cd03793 298 TLYFFTAGRYEFSNKGADMFLE-ALARLN 325 (590)
T ss_pred eEEEEEeeccccccCCHHHHHH-HHHHHH
Confidence 45555 899999 999999999 998764
No 73
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=97.74 E-value=0.00032 Score=66.70 Aligned_cols=76 Identities=13% Similarity=0.096 Sum_probs=50.4
Q ss_pred HhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC-------CCCCCCCcE-EEEEcCCCCccChHHH
Q 022349 217 LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPA-IISVAQFRPEKVRYKL 287 (298)
Q Consensus 217 ~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~-iLsvgRl~p~Kn~~l~ 287 (298)
|..+++|.+++.|+.+++.+.+. |+ +.++.|+..|++.+.....+ +.-..+++. +++.|++...|+++.+
T Consensus 143 ~~~~~ad~i~~~s~~~~~~l~~~-gi~~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~l 221 (380)
T PRK13609 143 WVHREVDRYFVATDHVKKVLVDI-GVPPEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKEL 221 (380)
T ss_pred cccCCCCEEEECCHHHHHHHHHc-CCChhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHH
Confidence 34668999999999999999884 65 45677777777532111000 000111244 4456899999999999
Q ss_pred HHHHHHh
Q 022349 288 ISTRYYS 294 (298)
Q Consensus 288 I~~Afa~ 294 (298)
++ ++..
T Consensus 222 i~-~l~~ 227 (380)
T PRK13609 222 CQ-SLMS 227 (380)
T ss_pred HH-HHhh
Confidence 99 8764
No 74
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.72 E-value=0.0039 Score=60.32 Aligned_cols=79 Identities=15% Similarity=0.096 Sum_probs=51.0
Q ss_pred HHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCC-------C--CCCCCcEEEEEcCCCCccC
Q 022349 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPL-------E--RSTEYPAIISVAQFRPEKV 283 (298)
Q Consensus 213 ~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~-------~--~~~~~~~iLsvgRl~p~Kn 283 (298)
.+.++..+.+|.|++.|+.+++.+.+. |.+.++.|+++ .+.+....... . ...+.++++++|+. +|+
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~~-g~~~~i~vi~n-~~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~~--~~~ 245 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLAL-GAKNEVTVTGN-LKFDIEVPPELAARAATLRRQLAPNRPVWIAASTH--EGE 245 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHHc-CCCCCcEeccc-ccccCCCChhhHHHHHHHHHHhcCCCcEEEEeCCC--chH
Confidence 345566778999999999999999985 64222555544 33332211000 0 00124678888874 688
Q ss_pred hHHHHHHHHHhhh
Q 022349 284 RYKLISTRYYSYL 296 (298)
Q Consensus 284 ~~l~I~~Afa~~~ 296 (298)
.+.+|+ ||++++
T Consensus 246 ~~~ll~-A~~~l~ 257 (425)
T PRK05749 246 EELVLD-AHRALL 257 (425)
T ss_pred HHHHHH-HHHHHH
Confidence 999999 998765
No 75
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=97.64 E-value=0.0061 Score=52.91 Aligned_cols=170 Identities=15% Similarity=0.115 Sum_probs=92.0
Q ss_pred cEEEEEcCC--CCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhcccc-ceeecCCCeEEEcccccee
Q 022349 35 TSVAFFHPN--TNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRF-GVELLHPPKVVHLYRRKWI 111 (298)
Q Consensus 35 ~~Va~~Hp~--l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f-~~~l~~~~~~i~l~~~~~~ 111 (298)
.+||++=-- =...||-|..+.+++..|++. +.+|.||........ . .+.+ |.+ .+.+..
T Consensus 2 kkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~--g~~v~Vyc~~~~~~~-----~-~~~y~gv~------l~~i~~---- 63 (185)
T PF09314_consen 2 KKIAIIGTRGIPARYGGFETFVEELAPRLVSK--GIDVTVYCRSDYYPY-----K-EFEYNGVR------LVYIPA---- 63 (185)
T ss_pred ceEEEEeCCCCCcccCcHHHHHHHHHHHHhcC--CceEEEEEccCCCCC-----C-CcccCCeE------EEEeCC----
Confidence 466666321 123799999999999999875 677788875432211 0 1122 222 222211
Q ss_pred ecccCCchhHHHHHHHHHHHHHHHHhc--cCCcEEEeC-CC-ccccccccc-c--cCCeEEEEeecCCcchHHhhhhhcc
Q 022349 112 EESTYPRFTMIGQSFGSVYLSWEALCK--FTPLYYFDT-SG-YAFTYPLAR-I--FGCRVICYTHYPTISLDMISRVREG 184 (298)
Q Consensus 112 ~~~~~~~~~l~~~~l~~~~~a~~~l~~--~~pDv~i~s-~~-~~~~~p~~~-~--~~~~~i~Y~H~P~~~~~~~~~~~~~ 184 (298)
+..-+.-++..-.+ ++..|....+. .+.|+++-- .+ .++..|+.+ + .+.+++.-.|... |++
T Consensus 64 -~~~g~~~si~yd~~-sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~vN~DGlE---------WkR 132 (185)
T PF09314_consen 64 -PKNGSAESIIYDFL-SLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVVVNMDGLE---------WKR 132 (185)
T ss_pred -CCCCchHHHHHHHH-HHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEEECCCcch---------hhh
Confidence 11111112222211 22333322222 246644421 12 234455433 2 2557888666655 432
Q ss_pred cccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEc
Q 022349 185 SSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY 250 (298)
Q Consensus 185 ~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIY 250 (298)
. ++..+-++.+...++.+.+.+|.+||-|...++.+++-|+ +.++++|.
T Consensus 133 ~----------------KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~y~-~~~s~~Ia 181 (185)
T PF09314_consen 133 A----------------KWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKERYG-RKKSTFIA 181 (185)
T ss_pred h----------------hcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHHcC-CCCcEEec
Confidence 1 2222333344444788899999999999999999999997 35555553
No 76
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.31 E-value=0.0018 Score=62.33 Aligned_cols=127 Identities=10% Similarity=-0.013 Sum_probs=79.3
Q ss_pred HHHHHHhccCCcEEEeCCCccccccc--c-cccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHH
Q 022349 131 LSWEALCKFTPLYYFDTSGYAFTYPL--A-RIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVY 207 (298)
Q Consensus 131 ~a~~~l~~~~pDv~i~s~~~~~~~p~--~-~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y 207 (298)
.+.+.+++.+||+++-..+.++...+ + +..+.|++.|+ .|. .+.|.++.
T Consensus 80 ~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~------~waw~~~~--------------------- 131 (385)
T TIGR00215 80 EVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQ------VWAWRKWR--------------------- 131 (385)
T ss_pred HHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCc------HhhcCcch---------------------
Confidence 44555788999977765443433334 2 34589999888 777 55553210
Q ss_pred HHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc--c--c----CCCCCCCCcEEEEE--cC
Q 022349 208 YTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ--V--L----PLERSTEYPAIISV--AQ 277 (298)
Q Consensus 208 ~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~--~--~----~~~~~~~~~~iLsv--gR 277 (298)
-+...+.+|.|++.+.++++.+++ +| .+..++-+|+-.+... . . .+.-+.+.+.++.+ ||
T Consensus 132 -------~r~l~~~~d~v~~~~~~e~~~~~~-~g--~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR 201 (385)
T TIGR00215 132 -------AKKIEKATDFLLAILPFEKAFYQK-KN--VPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSR 201 (385)
T ss_pred -------HHHHHHHHhHhhccCCCcHHHHHh-cC--CCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCC
Confidence 122344589999999999998875 34 5677888888322110 0 0 01111123566555 48
Q ss_pred CCC-ccChHHHHHHHHHhhh
Q 022349 278 FRP-EKVRYKLISTRYYSYL 296 (298)
Q Consensus 278 l~p-~Kn~~l~I~~Afa~~~ 296 (298)
..+ +|+++.+++ |++++.
T Consensus 202 ~aei~k~~~~ll~-a~~~l~ 220 (385)
T TIGR00215 202 GSEVEKLFPLFLK-AAQLLE 220 (385)
T ss_pred HHHHHHhHHHHHH-HHHHHH
Confidence 877 899999999 887764
No 77
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=97.23 E-value=0.0015 Score=64.34 Aligned_cols=53 Identities=15% Similarity=0.104 Sum_probs=40.0
Q ss_pred CCceEEcCCCCCCcccccCCC------------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 244 DRIKRVYPPCDTSGLQVLPLE------------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~~~------------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.++.|+++.||++.|...... ...++..++++||+.++|+++.+|+ ||+++++
T Consensus 227 ~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~-A~~~ll~ 291 (460)
T cd03788 227 VRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLL-AFERLLE 291 (460)
T ss_pred EEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHH-HHHHHHH
Confidence 357889999998887531100 0122568999999999999999999 9998764
No 78
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=97.13 E-value=0.0028 Score=60.97 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=50.4
Q ss_pred hccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC-------CCCCCCCcE-EEEEcCCCCccChHHHH
Q 022349 218 VGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP-------LERSTEYPA-IISVAQFRPEKVRYKLI 288 (298)
Q Consensus 218 ~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~-------~~~~~~~~~-iLsvgRl~p~Kn~~l~I 288 (298)
..+.+|.+++.|+.+++.+.+. |+ +.++.|+..|++.+.....+ ..-+.+++. +++.|++.+.|+++.++
T Consensus 144 ~~~~~d~~~v~s~~~~~~l~~~-gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li 222 (391)
T PRK13608 144 ITPYSTRYYVATKETKQDFIDV-GIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMI 222 (391)
T ss_pred ccCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHH
Confidence 4578999999999999999874 65 45677777888633211100 000111334 55789999999999999
Q ss_pred HHHHH
Q 022349 289 STRYY 293 (298)
Q Consensus 289 ~~Afa 293 (298)
+ ++.
T Consensus 223 ~-~~~ 226 (391)
T PRK13608 223 T-DIL 226 (391)
T ss_pred H-HHH
Confidence 9 753
No 79
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=97.13 E-value=0.0025 Score=60.93 Aligned_cols=77 Identities=13% Similarity=0.038 Sum_probs=57.2
Q ss_pred HhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccC--------CCCCCCCcEEEEEcCCCCccChHHH
Q 022349 217 LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLP--------LERSTEYPAIISVAQFRPEKVRYKL 287 (298)
Q Consensus 217 ~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~--------~~~~~~~~~iLsvgRl~p~Kn~~l~ 287 (298)
|..+.+|.+++.|+.+++.+.+. |. +.++.|+.+|++.+...... +.-+.+.+.++.+||..+.|++..+
T Consensus 146 w~~~~~d~~~~~s~~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~l 224 (382)
T PLN02605 146 WFHKGVTRCFCPSEEVAKRALKR-GLEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEET 224 (382)
T ss_pred cccCCCCEEEECCHHHHHHHHHc-CCCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHH
Confidence 34678999999999999999877 65 56788888899764332110 0001124789999999999999999
Q ss_pred HHHHHHhh
Q 022349 288 ISTRYYSY 295 (298)
Q Consensus 288 I~~Afa~~ 295 (298)
++ |+...
T Consensus 225 i~-~l~~~ 231 (382)
T PLN02605 225 AR-ALGDS 231 (382)
T ss_pred HH-HHHHh
Confidence 99 88754
No 80
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.11 E-value=0.0053 Score=52.30 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=26.5
Q ss_pred EEEEcCCCCC-CChHHHHHHHHHHHHHHhCCCCeEEEEc
Q 022349 37 VAFFHPNTND-GGGGERVLWCAVKAIQEESPDLDCIVYT 74 (298)
Q Consensus 37 Va~~Hp~l~~-~GGaErV~~~l~~aL~~~~~~~~v~iyT 74 (298)
|++++++... +||++++...++++|.+. ++++.+++
T Consensus 1 i~~i~~~~~~~~~G~~~~~~~l~~~L~~~--g~~v~v~~ 37 (229)
T cd01635 1 ILLVSTPLLPGGGGVELVLLDLAKALARR--GHEVEVVA 37 (229)
T ss_pred CeeeccccCCCCCCchhHHHHHHHHHHHc--CCeEEEEE
Confidence 4556666644 799999999999999886 55555543
No 81
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=96.98 E-value=0.013 Score=49.74 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=23.5
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
|+|-++-|+. ||.-|-.. ..|.+.. .+++.++|..
T Consensus 1 M~ILlle~y~---ggSHk~~~---~~L~~~~-~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPYY---GGSHKQWA---DGLAAHS-EHEWTLLTLP 35 (168)
T ss_pred CeEEEEcccc---ccCHHHHH---HHHHHhc-cCCEEEEEcC
Confidence 5788888887 67777765 4444444 5677777753
No 82
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=96.65 E-value=0.015 Score=57.46 Aligned_cols=53 Identities=15% Similarity=0.094 Sum_probs=39.9
Q ss_pred CCceEEcCCCCCCcccccCCC-----------CC-CCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 244 DRIKRVYPPCDTSGLQVLPLE-----------RS-TEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~~~-----------~~-~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.++.|+++.||++.|.+.... +. .+...+++|||+.+.|+++..++ ||+++++
T Consensus 222 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~-A~~~ll~ 286 (456)
T TIGR02400 222 VRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLL-AFERFLE 286 (456)
T ss_pred EEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHH-HHHHHHH
Confidence 457788999999988531100 00 12468999999999999999999 9998864
No 83
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.61 E-value=0.026 Score=53.77 Aligned_cols=74 Identities=14% Similarity=-0.089 Sum_probs=57.5
Q ss_pred HHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC-------CCCCCcEEEEEcCCCCccChH
Q 022349 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAIISVAQFRPEKVRY 285 (298)
Q Consensus 213 ~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~-------~~~~~~~iLsvgRl~p~Kn~~ 285 (298)
..++...++||.|++.|+..++.+++. + .++.+|++.||.+.|...+.. ...+++.++++|++.++++++
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~~-~--~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ 221 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRRL-N--PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE 221 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhhC-C--CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH
Confidence 346677889999999999999988875 4 689999999998887532111 012257899999999999998
Q ss_pred HHHH
Q 022349 286 KLIS 289 (298)
Q Consensus 286 l~I~ 289 (298)
++.+
T Consensus 222 ll~~ 225 (373)
T cd04950 222 LLEA 225 (373)
T ss_pred HHHH
Confidence 7776
No 84
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.22 E-value=0.026 Score=59.46 Aligned_cols=53 Identities=11% Similarity=-0.038 Sum_probs=40.0
Q ss_pred CCceEEcCCCCCCcccccCCC------------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 244 DRIKRVYPPCDTSGLQVLPLE------------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~~~------------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.++.|++.-||++.|...... .....+++++|||+++.||++..|+ ||.++++
T Consensus 242 ~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~-Afe~lL~ 306 (797)
T PLN03063 242 TRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYL-AFEKFLE 306 (797)
T ss_pred EEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHH-HHHHHHH
Confidence 467889999998877521100 0012579999999999999999999 9999864
No 85
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=96.10 E-value=0.012 Score=55.64 Aligned_cols=203 Identities=15% Similarity=0.095 Sum_probs=113.2
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhcccccee-ecCCCeEEEccccceeecccCCchhHHHH
Q 022349 46 DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVE-LLHPPKVVHLYRRKWIEESTYPRFTMIGQ 124 (298)
Q Consensus 46 ~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~-l~~~~~~i~l~~~~~~~~~~~~~~~l~~~ 124 (298)
+.||.|-=+-.+.+.|-+. ++.|++-|--+ ..+-|+. +....++..+.... ..+-+-+.+
T Consensus 13 ~~ggveshiy~lSq~li~l--ghkVvvithay-----------g~r~girylt~glkVyylp~~v------~~n~tT~pt 73 (426)
T KOG1111|consen 13 STGGVESHIYALSQCLIRL--GHKVVVITHAY-----------GNRVGIRYLTNGLKVYYLPAVV------GYNQTTFPT 73 (426)
T ss_pred CCCChhhhHHHhhcchhhc--CCeEEEEeccc-----------cCccceeeecCCceEEEEeeee------eecccchhh
Confidence 4589999999999999887 56666655222 0111222 23333444332110 111122333
Q ss_pred HHHHHHHHHHHHhccCCcEEEeCCCcccccc--c--ccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhh
Q 022349 125 SFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L--ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL 200 (298)
Q Consensus 125 ~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~--~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 200 (298)
.+..+++.-..+.+++..+++.-++.++..- + ++..|-+.++--|+-. .+.. .
T Consensus 74 v~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlktVfTdHSlf--------------Gfad---------~ 130 (426)
T KOG1111|consen 74 VFSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLKTVFTDHSLF--------------GFAD---------I 130 (426)
T ss_pred hhccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCceEEEeccccc--------------cccc---------h
Confidence 3333333222344567888885433221111 1 1223566777777522 0000 0
Q ss_pred hHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCC-cEEEEEcCC
Q 022349 201 SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEY-PAIISVAQF 278 (298)
Q Consensus 201 ~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~-~~iLsvgRl 278 (298)
+ ...+..+.+......|.+|+.|...++-..=.-.+ +.++.||.+.++++.|.+.+......+ -.++.+||+
T Consensus 131 ~------si~~n~ll~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~S~~i~~ivv~sRL 204 (426)
T KOG1111|consen 131 G------SILTNKLLPLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKPSADIITIVVASRL 204 (426)
T ss_pred h------hhhhcceeeeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCccccCCCCeeEEEEEeee
Confidence 0 01112234556778999999998887653322223 678899999999999984222211112 478999999
Q ss_pred CCccChHHHHHHHHHhhhh
Q 022349 279 RPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 279 ~p~Kn~~l~I~~Afa~~~~ 297 (298)
...|..|++++ .--++.+
T Consensus 205 vyrKGiDll~~-iIp~vc~ 222 (426)
T KOG1111|consen 205 VYRKGIDLLLE-IIPSVCD 222 (426)
T ss_pred eeccchHHHHH-HHHHHHh
Confidence 99999999999 7665543
No 86
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=95.87 E-value=0.23 Score=42.56 Aligned_cols=102 Identities=17% Similarity=0.210 Sum_probs=67.2
Q ss_pred cCCcEEEeCCCccccccccc-ccCCeEEEEeec---CCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHH
Q 022349 139 FTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHY---PTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWM 214 (298)
Q Consensus 139 ~~pDv~i~s~~~~~~~p~~~-~~~~~~i~Y~H~---P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~ 214 (298)
..|||++..+|+..++.++- ++++|.|+||-+ +. ..| .+.|+....+ ....++ .+.....
T Consensus 65 f~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~-g~d-----------~~FDpe~p~~-~~~~~~---~r~rN~~ 128 (171)
T PF12000_consen 65 FVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRAS-GAD-----------VGFDPEFPPS-LDDRAR---LRMRNAH 128 (171)
T ss_pred CCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCC-CCc-----------CCCCCCCCCC-HHHHHH---HHHHhHH
Confidence 45899998888877777764 689999999987 33 111 1112222111 111111 1222222
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcc
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGL 258 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~ 258 (298)
.-.....+|..++-++|-++.+=..|. .++.||+=-||++.+
T Consensus 129 ~l~~l~~~D~~isPT~wQ~~~fP~~~r--~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 129 NLLALEQADAGISPTRWQRSQFPAEFR--SKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHHhCCcCcCCCHHHHHhCCHHHH--cCcEEeecccchhhc
Confidence 334566799999999999999999997 899999999998765
No 87
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=95.34 E-value=0.13 Score=48.20 Aligned_cols=76 Identities=12% Similarity=0.085 Sum_probs=51.2
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCcccc--c--CC---CCC-CCCc-EEEEEcCCCC---ccCh
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQV--L--PL---ERS-TEYP-AIISVAQFRP---EKVR 284 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPv-d~~~~~~--~--~~---~~~-~~~~-~iLsvgRl~p---~Kn~ 284 (298)
.+.+|.+++.|+..++.+.+. |. +.++.++.+|+ |...+.. . .. ... .+++ ++++.||... +|++
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~~-G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~ 217 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQE-GEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQL 217 (363)
T ss_pred HHHhhhccCCCHHHHHHHHHc-CCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHH
Confidence 345799999999999999875 65 56688898886 4322110 0 00 000 1133 4558999874 7999
Q ss_pred HHHHHHHHHhhh
Q 022349 285 YKLISTRYYSYL 296 (298)
Q Consensus 285 ~l~I~~Afa~~~ 296 (298)
+.+++ |++.+.
T Consensus 218 ~~l~~-al~~l~ 228 (363)
T cd03786 218 EEILE-ALAELA 228 (363)
T ss_pred HHHHH-HHHHHH
Confidence 99999 988764
No 88
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.29 E-value=0.082 Score=55.17 Aligned_cols=53 Identities=11% Similarity=0.076 Sum_probs=40.0
Q ss_pred CCceEEcCCCCCCcccccC---C--------CC-CCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 244 DRIKRVYPPCDTSGLQVLP---L--------ER-STEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~---~--------~~-~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.++.|+++-||++.|.... . .. ..++..+++|||+++.||++..|+ ||.++++
T Consensus 228 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~-A~~~ll~ 292 (726)
T PRK14501 228 VRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLL-AFERFLE 292 (726)
T ss_pred EEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHH-HHHHHHH
Confidence 3578889999998885311 0 00 112468999999999999999999 9998864
No 89
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=94.77 E-value=0.91 Score=36.24 Aligned_cols=126 Identities=17% Similarity=0.143 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhHHHHHHHHHH
Q 022349 51 ERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVY 130 (298)
Q Consensus 51 ErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l~~~~l~~~~ 130 (298)
+-.+.++++.|++. +++|.+.|...+... . ...-+++ +..+... . .. ....+ .+.
T Consensus 10 ~~~~~~~~~~L~~~--g~~V~ii~~~~~~~~--~----~~~~~i~------~~~~~~~----~--k~----~~~~~-~~~ 64 (139)
T PF13477_consen 10 STFIYNLAKELKKR--GYDVHIITPRNDYEK--Y----EIIEGIK------VIRLPSP----R--KS----PLNYI-KYF 64 (139)
T ss_pred HHHHHHHHHHHHHC--CCEEEEEEcCCCchh--h----hHhCCeE------EEEecCC----C--Cc----cHHHH-HHH
Confidence 45678999999987 677788776432111 0 1011222 2332210 0 00 11111 112
Q ss_pred HHHHHHhccCCcEEEeCCCcc-cccc-cc-cccC-CeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHH
Q 022349 131 LSWEALCKFTPLYYFDTSGYA-FTYP-LA-RIFG-CRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (298)
Q Consensus 131 ~a~~~l~~~~pDv~i~s~~~~-~~~p-~~-~~~~-~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~ 206 (298)
-..+.+++.+||+++.....+ ...+ ++ +..+ .|+|...|..++ +.+. . . .+
T Consensus 65 ~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~--------------~~~~-----~--~---~~- 119 (139)
T PF13477_consen 65 RLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDF--------------YNSS-----K--K---KK- 119 (139)
T ss_pred HHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCee--------------ecCC-----c--h---HH-
Confidence 223447788999888544332 1222 22 3455 889998996552 1100 0 1 11
Q ss_pred HHHHHHHHHHHhccCCcEEEEcC
Q 022349 207 YYTFFSWMYGLVGSCADLAMVNS 229 (298)
Q Consensus 207 y~~~~~~~~~~~~~~ad~viaNS 229 (298)
+..++++++.+++|.|+++|
T Consensus 120 ---~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 120 ---LKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred ---HHHHHHHHHHHhCCEEEEcC
Confidence 22334677888999999987
No 90
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=94.68 E-value=0.16 Score=47.97 Aligned_cols=74 Identities=11% Similarity=0.008 Sum_probs=41.8
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc---c--c--CCCCCCCCcEEEEE-c-CCCCccC-hHHHH
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ---V--L--PLERSTEYPAIISV-A-QFRPEKV-RYKLI 288 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~---~--~--~~~~~~~~~~iLsv-g-Rl~p~Kn-~~l~I 288 (298)
.+.+|.+++.|+.+++.+.+. | .++.++-+|+...... . . .+.-..+.+.++.+ | |....|+ .+.++
T Consensus 132 ~~~~d~i~~~~~~~~~~~~~~-g--~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~ 208 (380)
T PRK00025 132 AKATDHVLALFPFEAAFYDKL-G--VPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFL 208 (380)
T ss_pred HHHHhhheeCCccCHHHHHhc-C--CCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 445899999999999998764 5 4555555665322110 0 0 01111113444433 3 6655444 68888
Q ss_pred HHHHHhhh
Q 022349 289 STRYYSYL 296 (298)
Q Consensus 289 ~~Afa~~~ 296 (298)
+ |++.+.
T Consensus 209 ~-a~~~l~ 215 (380)
T PRK00025 209 K-AAQLLQ 215 (380)
T ss_pred H-HHHHHH
Confidence 9 887654
No 91
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=93.69 E-value=0.3 Score=43.08 Aligned_cols=75 Identities=21% Similarity=0.137 Sum_probs=56.8
Q ss_pred CCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccc--cCCCCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 221 CADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV--LPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 221 ~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~--~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..+.+++.|......++..+. ..+..+++++++.+.+.. ..........+++++||+.+.|+++.+++ |+..+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~-~~~~~~~ 226 (381)
T COG0438 150 LADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIE-AAAKLKK 226 (381)
T ss_pred cccEEEECCHHHHHHHHHhCC-CCCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHH-HHHHhhh
Confidence 589999999999888887775 235778888999887763 11111110258999999999999999999 9987654
No 92
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=93.37 E-value=0.46 Score=46.01 Aligned_cols=221 Identities=15% Similarity=0.078 Sum_probs=109.3
Q ss_pred CCCCChHHHHHHHHHHHHHHhCCCCeEEE--EccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhH
Q 022349 44 TNDGGGGERVLWCAVKAIQEESPDLDCIV--YTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTM 121 (298)
Q Consensus 44 l~~~GGaErV~~~l~~aL~~~~~~~~v~i--yT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l 121 (298)
+.+|-|-.-....++++|++..|++++.. |.+.. +.+.+..-...+ +...++ .+-+........+.-
T Consensus 3 ~snghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~----~~~e~~~ip~~g-----~~~~~~--sgg~~~~~~~~~~~~ 71 (396)
T TIGR03492 3 LSNGHGEDLIAARIAKALLQLSPDLNLEALPLVGEG----RAYQNLGIPIIG-----PTKELP--SGGFSYQSLRGLLRD 71 (396)
T ss_pred CCCCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCC----HHHhhCCCceeC-----CCCCCC--CCCccCCCHHHHHHH
Confidence 34678888889999999999888888541 44332 111111111111 111111 111111111122223
Q ss_pred HHH-HHHHHHHHHHHHhcc--CCcEEEeCCCccccccc--ccccCCeEEE-EeecCCcchHHhhhhhcccccccchhhhh
Q 022349 122 IGQ-SFGSVYLSWEALCKF--TPLYYFDTSGYAFTYPL--ARIFGCRVIC-YTHYPTISLDMISRVREGSSMYNNNASIA 195 (298)
Q Consensus 122 ~~~-~l~~~~~a~~~l~~~--~pDv~i~s~~~~~~~p~--~~~~~~~~i~-Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~ 195 (298)
+++ .+.....++..+++. +||+++.+.|+. |+ +++.+.|.++ =+|... +.|..+.....
T Consensus 72 ~~~gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v---~~~aA~~~~~p~~~~~~~esn-------~~~~~~~~~~~----- 136 (396)
T TIGR03492 72 LRAGLVGLTLGQWRALRKWAKKGDLIVAVGDIV---PLLFAWLSGKPYAFVGTAKSD-------YYWESGPRRSP----- 136 (396)
T ss_pred HHhhHHHHHHHHHHHHHHHhhcCCEEEEECcHH---HHHHHHHcCCCceEEEeeccc-------eeecCCCCCcc-----
Confidence 444 333444556667777 899999987765 53 4566777654 346544 12211100000
Q ss_pred hchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCcEEEEE
Q 022349 196 QSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISV 275 (298)
Q Consensus 196 ~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsv 275 (298)
+..+-.+.-..+.++ -..+...+.||.|.+.-..|++.+++. | .++.++=+|+-.+-.......-..+.+.++.+
T Consensus 137 -~~~~~~~~G~~~~p~-e~n~l~~~~a~~v~~~~~~t~~~l~~~-g--~k~~~vGnPv~d~l~~~~~~~l~~~~~~lllL 211 (396)
T TIGR03492 137 -SDEYHRLEGSLYLPW-ERWLMRSRRCLAVFVRDRLTARDLRRQ-G--VRASYLGNPMMDGLEPPERKPLLTGRFRIALL 211 (396)
T ss_pred -chhhhccCCCccCHH-HHHHhhchhhCEEeCCCHHHHHHHHHC-C--CeEEEeCcCHHhcCccccccccCCCCCEEEEE
Confidence 000000000111111 123456789999999999999999863 4 45555557763221110000001112334333
Q ss_pred --cC-CCCccChHHHHHHHHHhhh
Q 022349 276 --AQ-FRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 276 --gR-l~p~Kn~~l~I~~Afa~~~ 296 (298)
+| =+-.++++.+++ |..++.
T Consensus 212 pGSR~ae~~~~lp~~l~-al~~L~ 234 (396)
T TIGR03492 212 PGSRPPEAYRNLKLLLR-ALEALP 234 (396)
T ss_pred CCCCHHHHHccHHHHHH-HHHHHh
Confidence 44 245567788888 777654
No 93
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=92.09 E-value=4.9 Score=39.14 Aligned_cols=185 Identities=19% Similarity=0.169 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhHHHHHHHH
Q 022349 49 GGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQSFGS 128 (298)
Q Consensus 49 GaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l~~~~l~~ 128 (298)
|--+.+.-++++|.+.+|+..+++ |+..++.. +.+.+.|+.. +.+..|... .+
T Consensus 60 GEv~a~~pLv~~l~~~~P~~~ilv-Tt~T~Tg~----e~a~~~~~~~----v~h~YlP~D-------~~----------- 112 (419)
T COG1519 60 GEVLAALPLVRALRERFPDLRILV-TTMTPTGA----ERAAALFGDS----VIHQYLPLD-------LP----------- 112 (419)
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EecCccHH----HHHHHHcCCC----eEEEecCcC-------ch-----------
Confidence 677888899999999999998644 54432222 2333334432 112222110 00
Q ss_pred HHHHHHHHhccCCc--EEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHH
Q 022349 129 VYLSWEALCKFTPL--YYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIV 206 (298)
Q Consensus 129 ~~~a~~~l~~~~pD--v~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~ 206 (298)
....+-++..+|| +++.|--+++.+--....++|.+. +-. -+|. |+ | ..+.+.+.+
T Consensus 113 -~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~~~p~~L-vNa-RLS~---rS-------~---------~~y~k~~~~ 170 (419)
T COG1519 113 -IAVRRFLRKWRPKLLIIMETELWPNLINELKRRGIPLVL-VNA-RLSD---RS-------F---------ARYAKLKFL 170 (419)
T ss_pred -HHHHHHHHhcCCCEEEEEeccccHHHHHHHHHcCCCEEE-Eee-eech---hh-------h---------HHHHHHHHH
Confidence 0112235677899 555666665555433234667654 222 1121 11 1 002222333
Q ss_pred HHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEE--------cCCCCCCccccc--CCCCCCCCcEEEEEc
Q 022349 207 YYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRV--------YPPCDTSGLQVL--PLERSTEYPAIISVA 276 (298)
Q Consensus 207 y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VI--------YPPvd~~~~~~~--~~~~~~~~~~iLsvg 276 (298)
.+...+.-|.|++-|+-.++++.++ |. .++.|. -||++....... .+.. ..+.++..|
T Consensus 171 --------~~~~~~~i~li~aQse~D~~Rf~~L-Ga-~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~--~r~v~iaaS 238 (419)
T COG1519 171 --------ARLLFKNIDLILAQSEEDAQRFRSL-GA-KPVVVTGNLKFDIEPPPQLAAELAALRRQLGG--HRPVWVAAS 238 (419)
T ss_pred --------HHHHHHhcceeeecCHHHHHHHHhc-CC-cceEEecceeecCCCChhhHHHHHHHHHhcCC--CCceEEEec
Confidence 3444567899999999999999988 42 222221 144433222211 1121 158999999
Q ss_pred CCCCccChHHHHHHHHHhhhh
Q 022349 277 QFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 277 Rl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.. +..-+.+++ |++.+++
T Consensus 239 TH--~GEeei~l~-~~~~l~~ 256 (419)
T COG1519 239 TH--EGEEEIILD-AHQALKK 256 (419)
T ss_pred CC--CchHHHHHH-HHHHHHh
Confidence 83 334566777 7776553
No 94
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=91.70 E-value=1.2 Score=44.41 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=38.4
Q ss_pred CceEEcCCCCCCcccccCCC-----------CC-CCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 245 RIKRVYPPCDTSGLQVLPLE-----------RS-TEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 245 ~~~VIYPPvd~~~~~~~~~~-----------~~-~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.+.+++.-||++.|.+.... +. +.+..|++|+|+.+.|+++..++ ||.++++
T Consensus 249 ~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~-Afe~~L~ 312 (487)
T TIGR02398 249 KLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLN-AYERLLE 312 (487)
T ss_pred EEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHH-HHHHHHH
Confidence 35677777888887532100 00 23579999999999999999999 9999875
No 95
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=90.88 E-value=0.9 Score=42.83 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=48.8
Q ss_pred CCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCcccc--c---CCC--CCCCCcEEEEEc-CC-CCccChHHHHH
Q 022349 221 CADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQV--L---PLE--RSTEYPAIISVA-QF-RPEKVRYKLIS 289 (298)
Q Consensus 221 ~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPv-d~~~~~~--~---~~~--~~~~~~~iLsvg-Rl-~p~Kn~~l~I~ 289 (298)
.+|.+++.|+..++++.+. |. +.++.|+++|+ |...... . ... ...++++++..+ |. ...|+++.+++
T Consensus 141 ~ad~~~~~s~~~~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~ 219 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFK 219 (365)
T ss_pred HHHhccCCCHHHHHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHH
Confidence 3899999999999999886 76 55789999997 3211100 0 000 011235666544 54 35699999999
Q ss_pred HHHHhhh
Q 022349 290 TRYYSYL 296 (298)
Q Consensus 290 ~Afa~~~ 296 (298)
|+.++.
T Consensus 220 -a~~~l~ 225 (365)
T TIGR00236 220 -AIREIV 225 (365)
T ss_pred -HHHHHH
Confidence 988764
No 96
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=90.05 E-value=2.8 Score=39.23 Aligned_cols=64 Identities=14% Similarity=0.010 Sum_probs=39.2
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCc
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPE 281 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~ 281 (298)
..+..+++|.+++.|+..++.+++. |. ..++.++ |..+...... .......+..++++||+...
T Consensus 117 ~~~~~~~aD~iI~~S~~~~~~l~~~-g~~~~~i~~~-~~~~~~~~~~-~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 117 EIDMLNLADVLIVHSKKMKDRLVEE-GLTTDKIIVQ-GIFDYLNDIE-LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCCcCceEec-cccccccccc-ccccccCCceEEEecChhhc
Confidence 4566778999999999999999875 64 2233333 4443221110 11111124689999999843
No 97
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=88.28 E-value=0.93 Score=45.58 Aligned_cols=74 Identities=18% Similarity=0.153 Sum_probs=51.1
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceE-EcCCCCCCcccccCCCCCCCCcEEEEEc--CCCCccChHHHHHHHHHh
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKR-VYPPCDTSGLQVLPLERSTEYPAIISVA--QFRPEKVRYKLISTRYYS 294 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~V-IYPPvd~~~~~~~~~~~~~~~~~iLsvg--Rl~p~Kn~~l~I~~Afa~ 294 (298)
...+|.+|+-+.-.++.+++.++- +....| .=||-++... .+...+. ..-+++++ |+ |+|.++.+|+ |+.+
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~~~~--~~~s~r~-~~~~I~v~idrL-~ek~~~~~I~-av~~ 344 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDTRLR--LGQSQQL-YETEIGFWIDGL-SDEELQQILQ-QLLQ 344 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccceEEe--cChhhcc-cceEEEEEcCCC-ChHHHHHHHH-HHHH
Confidence 457888898888888889888861 111222 2377777222 1223332 46888889 99 9999999999 9998
Q ss_pred hhh
Q 022349 295 YLD 297 (298)
Q Consensus 295 ~~~ 297 (298)
+++
T Consensus 345 ~~~ 347 (519)
T TIGR03713 345 YIL 347 (519)
T ss_pred HHh
Confidence 854
No 98
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=88.17 E-value=13 Score=35.67 Aligned_cols=224 Identities=16% Similarity=0.225 Sum_probs=119.5
Q ss_pred hccCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEcccc
Q 022349 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (298)
Q Consensus 29 ~~~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~ 108 (298)
.+..++.-+++| ||..|-.-|.. .=|..|++.+-+++..=|.... ..+++.+ ++.+++..+..-
T Consensus 8 ~~~~k~ra~vvV---LGDvGRSPRMq-YHA~Sla~~gf~VdliGy~~s~--p~e~l~~----------hprI~ih~m~~l 71 (444)
T KOG2941|consen 8 NKSKKKRAIVVV---LGDVGRSPRMQ-YHALSLAKLGFQVDLIGYVESI--PLEELLN----------HPRIRIHGMPNL 71 (444)
T ss_pred cccccceEEEEE---ecccCCChHHH-HHHHHHHHcCCeEEEEEecCCC--ChHHHhc----------CCceEEEeCCCC
Confidence 334444455566 44556777777 4556777876666654454221 2233332 122222222111
Q ss_pred ---ceeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc---cc----ccCCeEEEEeecCCcchHHh
Q 022349 109 ---KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL---AR----IFGCRVICYTHYPTISLDMI 178 (298)
Q Consensus 109 ---~~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~---~~----~~~~~~i~Y~H~P~~~~~~~ 178 (298)
...++.....+.++||.+.+.+..+ ....+|+++-+..++ +|. .. +.+++-++=-|.=..|.. +
T Consensus 72 ~~~~~~p~~~~l~lKvf~Qfl~Ll~aL~---~~~~~~~ilvQNPP~--iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~-l 145 (444)
T KOG2941|consen 72 PFLQGGPRVLFLPLKVFWQFLSLLWALF---VLRPPDIILVQNPPS--IPTLIVCVLYSILTGAKFIIDWHNYGYSLQ-L 145 (444)
T ss_pred cccCCCchhhhhHHHHHHHHHHHHHHHH---hccCCcEEEEeCCCC--CchHHHHHHHHHHhcceEEEEehhhHHHHH-H
Confidence 1111112233455777664332222 246688777665543 552 11 246777776775332211 0
Q ss_pred hhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEc--CCC---
Q 022349 179 SRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVY--PPC--- 253 (298)
Q Consensus 179 ~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIY--PPv--- 253 (298)
.. . . + . ...+-++..+.++..++.||.=++.++.-++++.+.||+ .+..|+| ||-
T Consensus 146 ~~-~-~----------g----~---~h~lV~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qnWgi-~ra~v~YDrPps~~~ 205 (444)
T KOG2941|consen 146 KL-K-L----------G----F---QHPLVRLVRWLEKYFGKLADYNLCVTKAMREDLIQNWGI-NRAKVLYDRPPSKPT 205 (444)
T ss_pred Hh-h-c----------C----C---CCchHHHHHHHHHHhhcccccchhhHHHHHHHHHHhcCC-ceeEEEecCCCCCCC
Confidence 10 0 0 0 0 011224445557788999999999999999999999995 3788999 663
Q ss_pred CCCc----cccc-----------CC----C-----C----------CCCCcEEEEEcCCCCccChHHHHHHHHHhh
Q 022349 254 DTSG----LQVL-----------PL----E-----R----------STEYPAIISVAQFRPEKVRYKLISTRYYSY 295 (298)
Q Consensus 254 d~~~----~~~~-----------~~----~-----~----------~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~ 295 (298)
+.+. |.++ +. + + ..++..++|---..|..|+..+++ |...+
T Consensus 206 ~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~-AL~~y 280 (444)
T KOG2941|consen 206 PLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLE-ALVIY 280 (444)
T ss_pred chhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHH-HHHhh
Confidence 1111 1110 00 0 0 012345677777889999999999 87644
No 99
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=85.26 E-value=13 Score=35.18 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=26.5
Q ss_pred HHHHHHHHHhccCCcEEEeCCCcccccc--c-ccccCCeEEEEeecCC
Q 022349 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPT 172 (298)
Q Consensus 128 ~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~-~~~~~~~~i~Y~H~P~ 172 (298)
....+.+.+++.+||+++.+.|++ ..| + +++.+.|++ +|...
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~-s~p~~~aa~~~~~p~~--i~e~n 123 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFV-SVPVVIGGWLNRVPVL--LHESD 123 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchh-hHHHHHHHHHcCCCEE--EECCC
Confidence 444455567889999999887664 333 2 345677764 45544
No 100
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=85.10 E-value=4.4 Score=43.64 Aligned_cols=28 Identities=14% Similarity=0.168 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 269 YPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 269 ~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..+||+|+|+.+.|++..-++ ||.+|++
T Consensus 363 ~kiIlgVDRLD~~KGI~~kL~-AfE~fL~ 390 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQKIL-AFEKFLE 390 (934)
T ss_pred ceEEEEeeccccccCHHHHHH-HHHHHHH
Confidence 469999999999999999999 9999875
No 101
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=84.15 E-value=17 Score=30.93 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc
Q 022349 122 IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL 156 (298)
Q Consensus 122 ~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~ 156 (298)
.+..+.....++..+.+.+||+++++ |...++|+
T Consensus 74 ~~~~l~~~~~~~~il~r~rPdvii~n-Gpg~~vp~ 107 (170)
T PF08660_consen 74 IFTTLRAFLQSLRILRRERPDVIISN-GPGTCVPV 107 (170)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEc-CCceeeHH
Confidence 44444455556667778899999988 67788884
No 102
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=82.83 E-value=11 Score=36.07 Aligned_cols=37 Identities=27% Similarity=0.365 Sum_probs=23.5
Q ss_pred HHHHHHHHHhccCCcEEEeCCCcccccc-cc-cccCCeE
Q 022349 128 SVYLSWEALCKFTPLYYFDTSGYAFTYP-LA-RIFGCRV 164 (298)
Q Consensus 128 ~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~~-~~~~~~~ 164 (298)
...-+.+.+++.+||+++++.|+...-+ ++ +..+.|+
T Consensus 79 ~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv 117 (357)
T COG0707 79 GVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPV 117 (357)
T ss_pred HHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCE
Confidence 3444455688999999999987753333 23 3345555
No 103
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=82.68 E-value=2 Score=43.76 Aligned_cols=124 Identities=12% Similarity=0.044 Sum_probs=70.0
Q ss_pred cCCeEEEEeecCCcchHHhhhhhcc-cccccchhhhhhchhhhHHH--HHHHHHHHHHHHHhccCCcEEEEcCHHHHHHH
Q 022349 160 FGCRVICYTHYPTISLDMISRVREG-SSMYNNNASIAQSNWLSQCK--IVYYTFFSWMYGLVGSCADLAMVNSSWTQSHI 236 (298)
Q Consensus 160 ~~~~~i~Y~H~P~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~k--~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i 236 (298)
.+...|+-.|.-. ..|++-.. ...|++-+... +-..++ .++-+ ..+++.++..||.+-++|+-|+..-
T Consensus 166 ~~VaTvFTTHAT~----lGR~l~~~~~~~Y~~L~~~~---~d~eA~~~~i~~k--~~iEraaA~~AdvFTTVSeITa~Ea 236 (633)
T PF05693_consen 166 PDVATVFTTHATL----LGRYLAANNKDFYNNLDKFN---GDQEAGERNIYHK--HSIERAAAHYADVFTTVSEITAKEA 236 (633)
T ss_dssp -SCEEEEEESS-H----HHHHHTTTSS-TTTSGTTS----HHHHHHHTT-HHH--HHHHHHHHHHSSEEEESSHHHHHHH
T ss_pred CCeeEEEEecccc----hhhHhhcCCCcHHHHhhccC---ccccccCccchHH--HHHHHHHHHhcCeeeehhhhHHHHH
Confidence 4666788899754 34655422 12344221110 011111 22322 2346778899999999999999999
Q ss_pred HHHhCCCCCc-eEEcCCCCCCcccccC--------------------CCC----C-CCCcEEEEEcCCC-CccChHHHHH
Q 022349 237 EKLWGIPDRI-KRVYPPCDTSGLQVLP--------------------LER----S-TEYPAIISVAQFR-PEKVRYKLIS 289 (298)
Q Consensus 237 ~~~~g~~~~~-~VIYPPvd~~~~~~~~--------------------~~~----~-~~~~~iLsvgRl~-p~Kn~~l~I~ 289 (298)
+.+++ +++ .|+.+-.+++.+.... +-. . .+.-++.+.||+| ..|.+|..||
T Consensus 237 ~~LL~--r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fie 314 (633)
T PF05693_consen 237 EHLLK--RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIE 314 (633)
T ss_dssp HHHHS--S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHH
T ss_pred HHHhC--CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHH
Confidence 99998 555 5666777766553210 000 0 0123677999998 8999999999
Q ss_pred HHHHhh
Q 022349 290 TRYYSY 295 (298)
Q Consensus 290 ~Afa~~ 295 (298)
|.+++
T Consensus 315 -AL~rL 319 (633)
T PF05693_consen 315 -ALARL 319 (633)
T ss_dssp -HHHHH
T ss_pred -HHHHH
Confidence 99876
No 104
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=81.92 E-value=18 Score=31.18 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=25.2
Q ss_pred HHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceE
Q 022349 212 SWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKR 248 (298)
Q Consensus 212 ~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~V 248 (298)
..+.+...+.-|.|+|-|+-.+++++++-..++++.|
T Consensus 140 ~~~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v 176 (186)
T PF04413_consen 140 PFLFRPLLSRFDRILAQSEADAERFRKLGAPPERVHV 176 (186)
T ss_dssp -HHHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE
T ss_pred HHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEE
Confidence 3346667788899999999999999988432334555
No 105
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=80.99 E-value=16 Score=34.65 Aligned_cols=97 Identities=12% Similarity=0.213 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhHHHHH---HHH
Q 022349 52 RVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS---FGS 128 (298)
Q Consensus 52 rV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l~~~~---l~~ 128 (298)
.+.-.+++.|.+. |++|.|.+-+. +.. .++-+.+|++ .+.++. .+ -++.... ...
T Consensus 14 hfFk~~I~eL~~~--GheV~it~R~~----~~~-~~LL~~yg~~------y~~iG~--------~g-~~~~~Kl~~~~~R 71 (335)
T PF04007_consen 14 HFFKNIIRELEKR--GHEVLITARDK----DET-EELLDLYGID------YIVIGK--------HG-DSLYGKLLESIER 71 (335)
T ss_pred HHHHHHHHHHHhC--CCEEEEEEecc----chH-HHHHHHcCCC------eEEEcC--------CC-CCHHHHHHHHHHH
Confidence 3556788899886 67766655333 222 2223355654 222221 01 1222221 112
Q ss_pred HHHHHHHHhccCCcEEEeCCCcccccc-cccccCCeEEEEeecCC
Q 022349 129 VYLSWEALCKFTPLYYFDTSGYAFTYP-LARIFGCRVICYTHYPT 172 (298)
Q Consensus 129 ~~~a~~~l~~~~pDv~i~s~~~~~~~p-~~~~~~~~~i~Y~H~P~ 172 (298)
.....+.+++.+||++++..+ ...+ ++...+.|+|.++.+|.
T Consensus 72 ~~~l~~~~~~~~pDv~is~~s--~~a~~va~~lgiP~I~f~D~e~ 114 (335)
T PF04007_consen 72 QYKLLKLIKKFKPDVAISFGS--PEAARVAFGLGIPSIVFNDTEH 114 (335)
T ss_pred HHHHHHHHHhhCCCEEEecCc--HHHHHHHHHhCCCeEEEecCch
Confidence 222344466789999996543 2234 44556899999999876
No 106
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=78.76 E-value=16 Score=32.77 Aligned_cols=34 Identities=24% Similarity=0.180 Sum_probs=25.2
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCC
Q 022349 41 HPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (298)
Q Consensus 41 Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~ 77 (298)
.|+. .-||-.-|+-.+.++|++.+ ++|.+.++.+
T Consensus 10 ~P~~-k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y 43 (245)
T PF08323_consen 10 APFA-KVGGLGDVVGSLPKALAKQG--HDVRVIMPKY 43 (245)
T ss_dssp TTTB--SSHHHHHHHHHHHHHHHTT---EEEEEEE-T
T ss_pred Cccc-ccCcHhHHHHHHHHHHHhcC--CeEEEEEccc
Confidence 4555 46999999999999999984 6777777654
No 107
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=78.21 E-value=19 Score=32.81 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=25.8
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
|||+|..... +.|=+-|.+ .++++| + +++|.+.+..
T Consensus 1 MkIl~~v~~~-G~GH~~R~~-~la~~L-r---g~~v~~~~~~ 36 (318)
T PF13528_consen 1 MKILFYVQGH-GLGHASRCL-ALARAL-R---GHEVTFITSG 36 (318)
T ss_pred CEEEEEeCCC-CcCHHHHHH-HHHHHH-c---cCceEEEEcC
Confidence 6899998886 457777777 699998 3 3666666643
No 108
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=70.39 E-value=1.1e+02 Score=29.94 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=35.5
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCC
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~ 77 (298)
+||.+.=-+-..--|-|-.+..++.+|.+..|+.++.|+|...
T Consensus 1 ~~i~i~G~~g~~N~GdeAil~~ii~~l~~~~p~~~i~v~S~~P 43 (426)
T PRK10017 1 MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYP 43 (426)
T ss_pred CeEEEEccccCCCccHHHHHHHHHHHHHhhCCCCeEEEEecCc
Confidence 4666666655455799999999999999999999999998654
No 109
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=66.47 E-value=19 Score=30.10 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=27.3
Q ss_pred HhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC
Q 022349 217 LVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC 253 (298)
Q Consensus 217 ~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPv 253 (298)
|..+.+|.+++-|+.+++++.+ .|+ ++++.|.=.||
T Consensus 133 W~~~~~D~y~Vase~~~~~l~~-~Gi~~~~I~vtGiPV 169 (169)
T PF06925_consen 133 WIHPGVDRYFVASEEVKEELIE-RGIPPERIHVTGIPV 169 (169)
T ss_pred eecCCCCEEEECCHHHHHHHHH-cCCChhHEEEeCccC
Confidence 3566799999999999999999 686 45555543443
No 110
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=61.05 E-value=30 Score=34.46 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=21.7
Q ss_pred cEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 270 PAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 270 ~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..+++|.|++.-|++..-++ ||.+|++
T Consensus 277 ~ii~gvDrld~~kGi~~kl~-Afe~fL~ 303 (474)
T PF00982_consen 277 KIIVGVDRLDYTKGIPEKLR-AFERFLE 303 (474)
T ss_dssp EEEEEE--B-GGG-HHHHHH-HHHHHHH
T ss_pred EEEEEeccchhhcCHHHHHH-HHHHHHH
Confidence 78999999999999999999 9999875
No 111
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=60.08 E-value=30 Score=31.68 Aligned_cols=86 Identities=22% Similarity=0.278 Sum_probs=54.0
Q ss_pred CCcEEEeCC-Ccccccc-c-cc-ccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchh---hhHHHHHHHHHHH
Q 022349 140 TPLYYFDTS-GYAFTYP-L-AR-IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNW---LSQCKIVYYTFFS 212 (298)
Q Consensus 140 ~pDv~i~s~-~~~~~~p-~-~~-~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~---~~~~k~~y~~~~~ 212 (298)
+.|++|+.+ |++ .++ . ++ ..++|.+.-.|.--. ++++ -.+.++.+ ....|.++-++|.
T Consensus 172 ~advyHsvstGyA-gl~g~~~k~~~g~P~lLTEHGIY~--------RER~------~ei~~a~w~~~~~~~r~~wi~~f~ 236 (268)
T PF11997_consen 172 KADVYHSVSTGYA-GLLGALAKYRYGRPFLLTEHGIYT--------RERE------IEILQADWIWESPYVRDLWIRFFE 236 (268)
T ss_pred CCCEEecCCccHH-HHHHHHHHHHhCCCEEEecCCccH--------HHHH------HHHHhcccccchHHHHHHHHHHHH
Confidence 358999776 333 222 2 22 458999999997431 1111 01122222 2456777778888
Q ss_pred HHHHHhccCCcEEEEcCHHHHHHHHHHhC
Q 022349 213 WMYGLVGSCADLAMVNSSWTQSHIEKLWG 241 (298)
Q Consensus 213 ~~~~~~~~~ad~viaNS~~Ta~~i~~~~g 241 (298)
.+-+.+++.||.|++-+++.++ .+.-+|
T Consensus 237 ~l~~~~Y~~Ad~I~~l~~~n~~-~q~~~G 264 (268)
T PF11997_consen 237 SLSRLAYRAADRITPLYEYNRE-WQIELG 264 (268)
T ss_pred HHHHHHHHhhCeecccchhhHH-HHHHhC
Confidence 8888899999999999998444 455555
No 112
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=57.14 E-value=1.2e+02 Score=29.39 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=35.2
Q ss_pred ccCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCC
Q 022349 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDH 77 (298)
Q Consensus 30 ~~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~ 77 (298)
+..+.+||.|.-+++.+. |==|-...++++|++.+++.++.+.|+-.
T Consensus 5 ~~~~~~Ri~~Yshd~~Gl-GHlrR~~~Ia~aLv~d~~~~~Il~IsG~~ 51 (400)
T COG4671 5 EASKRPRILFYSHDLLGL-GHLRRALRIAHALVEDYLGFDILIISGGP 51 (400)
T ss_pred chhccceEEEEehhhccc-hHHHHHHHHHHHHhhcccCceEEEEeCCC
Confidence 355667898876666444 55666668999999999999988888653
No 113
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=53.16 E-value=22 Score=35.55 Aligned_cols=80 Identities=16% Similarity=0.001 Sum_probs=49.4
Q ss_pred HHhccCCcEEEEcCHHHHHHHH-HHhC-----C-------------CCCceEEcCCCCCC---ccccc------------
Q 022349 216 GLVGSCADLAMVNSSWTQSHIE-KLWG-----I-------------PDRIKRVYPPCDTS---GLQVL------------ 261 (298)
Q Consensus 216 ~~~~~~ad~viaNS~~Ta~~i~-~~~g-----~-------------~~~~~VIYPPvd~~---~~~~~------------ 261 (298)
+.....||.|.+.|.-=++.|. ..|| . +.+..+-+|-.|.. .+...
T Consensus 203 K~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L 282 (487)
T COG0297 203 KGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVAL 282 (487)
T ss_pred hhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHH
Confidence 4456789999999999888888 2232 0 12222222444431 11100
Q ss_pred ----CCCCCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 262 ----PLERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 262 ----~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
..+...+.+++.++||+..+|.+|++++ |...+.
T Consensus 283 ~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~-~i~~~l 320 (487)
T COG0297 283 QERLGLDVDLPGPLFGFVSRLTAQKGLDLLLE-AIDELL 320 (487)
T ss_pred HHHhCCCCCCCCcEEEEeeccccccchhHHHH-HHHHHH
Confidence 0111123589999999999999999999 766554
No 114
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=45.09 E-value=50 Score=34.00 Aligned_cols=37 Identities=22% Similarity=0.515 Sum_probs=24.6
Q ss_pred HHHHhccCCc--EEEeCCCccccccccc---ccCC--eEEEEeecCC
Q 022349 133 WEALCKFTPL--YYFDTSGYAFTYPLAR---IFGC--RVICYTHYPT 172 (298)
Q Consensus 133 ~~~l~~~~pD--v~i~s~~~~~~~p~~~---~~~~--~~i~Y~H~P~ 172 (298)
.+.+.+.+|| +.||.-| |...+++ ..+. |++.|+ .|+
T Consensus 303 ~~~i~~~kPD~vIlID~Pg--FNlrLAK~lkk~Gi~ipviyYV-sPq 346 (608)
T PRK01021 303 YKTILKTNPRTVICIDFPD--FHFLLIKKLRKRGYKGKIVHYV-CPS 346 (608)
T ss_pred HHHHHhcCCCEEEEeCCCC--CCHHHHHHHHhcCCCCCEEEEE-Ccc
Confidence 3456678999 5667655 6677653 2343 888877 888
No 115
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=43.66 E-value=1.3e+02 Score=27.90 Aligned_cols=38 Identities=11% Similarity=0.113 Sum_probs=25.3
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
||.|+..+- . |==-...-++++|.+.+|++++.+.|..
T Consensus 1 rILii~~~~--i-GD~vl~tp~l~~Lk~~~P~a~I~~l~~~ 38 (344)
T TIGR02201 1 RILLIKLRH--H-GDMLLTTPVISSLKKNYPDAKIDVLLYQ 38 (344)
T ss_pred CEEEEEecc--c-cceeeHHHHHHHHHHHCCCCEEEEEECc
Confidence 355555543 1 3333445678999999999998887754
No 116
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=39.05 E-value=69 Score=30.92 Aligned_cols=36 Identities=33% Similarity=0.499 Sum_probs=23.2
Q ss_pred HHHhccCCc--EEEeCCCccccccccc-c--cCCe--EEEEeecCC
Q 022349 134 EALCKFTPL--YYFDTSGYAFTYPLAR-I--FGCR--VICYTHYPT 172 (298)
Q Consensus 134 ~~l~~~~pD--v~i~s~~~~~~~p~~~-~--~~~~--~i~Y~H~P~ 172 (298)
+.+...+|| ++||..| |.+.+++ . .+.+ ++.|+ .|+
T Consensus 76 ~~~~~~~pd~vIlID~pg--FNlrlak~lk~~~~~~~viyYI-~Pq 118 (373)
T PF02684_consen 76 ERIKEEKPDVVILIDYPG--FNLRLAKKLKKRGIPIKVIYYI-SPQ 118 (373)
T ss_pred HHHHHcCCCEEEEeCCCC--ccHHHHHHHHHhCCCceEEEEE-CCc
Confidence 345678899 6667655 7777653 1 2334 77777 688
No 117
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=37.87 E-value=27 Score=28.15 Aligned_cols=8 Identities=63% Similarity=0.974 Sum_probs=3.5
Q ss_pred hhhccCCC
Q 022349 27 HNARRNRT 34 (298)
Q Consensus 27 ~~~~~~~~ 34 (298)
+++|..++
T Consensus 22 ~~rRR~r~ 29 (130)
T PF12273_consen 22 HNRRRRRR 29 (130)
T ss_pred HHHHHhhc
Confidence 44444444
No 118
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=37.62 E-value=2.3e+02 Score=26.49 Aligned_cols=42 Identities=10% Similarity=0.059 Sum_probs=31.3
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 32 ~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
+.++||.++.++. . |==-...-++++|.+.+|++++.+.+..
T Consensus 3 ~~~~~ILii~~~~--i-GD~vl~~P~l~~Lk~~~P~a~I~~l~~~ 44 (352)
T PRK10422 3 KPFRRILIIKMRF--H-GDMLLTTPVISSLKKNYPDAKIDVLLYQ 44 (352)
T ss_pred CCCceEEEEEecc--c-CceeeHHHHHHHHHHHCCCCeEEEEecc
Confidence 5578899999865 2 4344455678999999999998777643
No 119
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=36.66 E-value=3e+02 Score=24.57 Aligned_cols=38 Identities=24% Similarity=0.289 Sum_probs=28.5
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ 259 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~ 259 (298)
.+.+|.+|+|.+.+ -|+....| ....++|+|-+.+...
T Consensus 196 i~~~~l~I~~Dsg~-~HlA~a~~--~p~i~l~g~~~~~~~~ 233 (279)
T cd03789 196 LARADLVVTNDSGP-MHLAAALG--TPTVALFGPTDPARTG 233 (279)
T ss_pred HHhCCEEEeeCCHH-HHHHHHcC--CCEEEEECCCCccccC
Confidence 45799999997755 45666777 7888899988776654
No 120
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=35.56 E-value=2.9e+02 Score=25.67 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=28.5
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
|||.|+.++. . |==-...-++++|.+.+|++++.+.|.
T Consensus 1 mrILii~~~~--i-GD~il~tP~l~~Lk~~~P~a~I~~l~~ 38 (348)
T PRK10916 1 MKILVIGPSW--V-GDMMMSQSLYRTLKARYPQAIIDVMAP 38 (348)
T ss_pred CcEEEEccCc--c-cHHHhHHHHHHHHHHHCCCCeEEEEec
Confidence 4788888875 2 444455578899999999999877764
No 121
>PF11346 DUF3149: Protein of unknown function (DUF3149); InterPro: IPR021494 This bacterial family of proteins has no known function.
Probab=34.08 E-value=92 Score=20.31 Aligned_cols=32 Identities=9% Similarity=0.124 Sum_probs=21.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 022349 2 APYGILIWAVITAVLASILILASHVHNARRNR 33 (298)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (298)
.|+|++.|+++...+....-....+.+|-.++
T Consensus 9 s~vGL~Sl~vI~~~igm~~~~~~~F~~k~~~~ 40 (42)
T PF11346_consen 9 SDVGLMSLIVIVFTIGMGVFFIRYFIRKMKED 40 (42)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 47899888888877766665555555554443
No 122
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=33.24 E-value=3e+02 Score=26.05 Aligned_cols=34 Identities=12% Similarity=0.337 Sum_probs=21.3
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHH-HHhCCCCeEEE
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAI-QEESPDLDCIV 72 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL-~~~~~~~~v~i 72 (298)
..|.++-|-.| ..+ .+.+.++++ ++.+|+.++++
T Consensus 41 p~VSViiP~~n---ee~-~l~~~L~Sl~~q~Yp~~EIiv 75 (373)
T TIGR03472 41 PPVSVLKPLHG---DEP-ELYENLASFCRQDYPGFQMLF 75 (373)
T ss_pred CCeEEEEECCC---CCh-hHHHHHHHHHhcCCCCeEEEE
Confidence 46999999774 333 344444555 44578887654
No 123
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=31.25 E-value=2.6e+02 Score=25.65 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=27.8
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
|||.|+++.- . |=--...-++++|++.+|++++.+.|.
T Consensus 1 m~ILii~~~~--i-GD~v~~~p~~~~lk~~~P~a~I~~l~~ 38 (322)
T PRK10964 1 MRVLIVKTSS--M-GDVLHTLPALTDAQQAIPGIQFDWVVE 38 (322)
T ss_pred CeEEEEeccc--h-HHHHhHHHHHHHHHHhCCCCEEEEEEC
Confidence 5788888764 2 444444467889999999999887774
No 124
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=30.02 E-value=5.3e+02 Score=25.92 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 269 YPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 269 ~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...++++-|+..-|++..=+. ||.+|+.
T Consensus 282 ~kiivgvDRlDy~kGi~~rl~-Afe~lL~ 309 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQRLL-AFERLLE 309 (486)
T ss_pred ceEEEEehhcccccCcHHHHH-HHHHHHH
Confidence 578999999999999999999 9999985
No 125
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=28.31 E-value=2.2e+02 Score=24.30 Aligned_cols=34 Identities=21% Similarity=0.226 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEE
Q 022349 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIV 72 (298)
Q Consensus 32 ~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~i 72 (298)
++..+|.+ .||.|-|+..+++.|.+.+|+.+++-
T Consensus 46 ~~~~~vfl-------lG~~~~v~~~~~~~l~~~yP~l~i~g 79 (177)
T TIGR00696 46 KEKLPIFL-------YGGKPDVLQQLKVKLIKEYPKLKIVG 79 (177)
T ss_pred HcCCeEEE-------ECCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 44467765 38999999999999999999987544
No 126
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=27.89 E-value=4.2e+02 Score=23.28 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=21.4
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEE
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIV 72 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~i 72 (298)
.+.+| ||. ||---=.+++.++|++.+..-.+++
T Consensus 40 ~~lVv---lGS-GGHT~EMlrLl~~l~~~y~~r~yI~ 72 (211)
T KOG3339|consen 40 STLVV---LGS-GGHTGEMLRLLEALQDLYSPRSYIA 72 (211)
T ss_pred eEEEE---EcC-CCcHHHHHHHHHHHHhhcCceEEEE
Confidence 55555 554 5544445678899999987766554
No 127
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=27.09 E-value=6.2e+02 Score=25.30 Aligned_cols=109 Identities=12% Similarity=0.098 Sum_probs=58.9
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
+|||++-+++. ..-.-..+..+.+.+.+. ..++.+|....+ +.+...+++..... +|+.+..
T Consensus 1 LRIGyvS~Df~-~Hpv~~l~~~ll~~hDr~--rfev~~Ys~~~~-d~~~~~~~~~~~~~-------~~~dl~~------- 62 (468)
T PF13844_consen 1 LRIGYVSSDFR-NHPVGHLLQPLLENHDRS--RFEVFCYSLGPD-DGDTFRQRIRAEAD-------HFVDLSG------- 62 (468)
T ss_dssp EEEEEEES-SS-SSHHHHHHHHHHHHHHHH--TEEEEEEESS----SCHHHHHHHHHSE-------EEEEEEE-------
T ss_pred CEEEEECCcch-hCHHHHHHHHHHHhcCcc--cEEEEEEECCCC-CCcHHHHHHHHhCC-------eEEECcc-------
Confidence 48999999995 577778887787777665 567788875421 11122223322111 1333211
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--cccccCCeE-EEEeecCC
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCRV-ICYTHYPT 172 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~~~~~~~~~-i~Y~H~P~ 172 (298)
..--.+ +.+.++..+.|+++|-.|+...-- +.....+|+ +.|+-||.
T Consensus 63 ----~~~~~~-------~A~~Ir~D~IDILVDL~GhT~~~R~~ifA~RpAPVQvswlGyp~ 112 (468)
T PF13844_consen 63 ----LSDDAE-------AAQRIRADGIDILVDLSGHTAGNRLEIFALRPAPVQVSWLGYPG 112 (468)
T ss_dssp -----TTSHH-------HHHHHHHTT-SEEEESSTSSTSSSHHHHHT-SSSEEEEESSSSS
T ss_pred ----CCcHHH-------HHHHHHHCCCCEEEeCCCcCCCCHhHHHhcCCcceEEEecCCCc
Confidence 000001 123356788999999988653321 222235666 88999885
No 128
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=26.26 E-value=1.4e+02 Score=18.44 Aligned_cols=25 Identities=28% Similarity=0.421 Sum_probs=16.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHH
Q 022349 2 APYGILIWAVITAVLASILILASHV 26 (298)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (298)
+-.|+.||=+|+|=.+--.+.++++
T Consensus 4 aqlg~~~WhDLAAP~iagIi~s~iv 28 (35)
T PF13940_consen 4 AQLGIAFWHDLAAPIIAGIIASLIV 28 (35)
T ss_pred HHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 3469999999988665444444444
No 129
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=25.55 E-value=2.4e+02 Score=23.68 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=27.4
Q ss_pred cCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEE
Q 022349 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI 71 (298)
Q Consensus 31 ~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~ 71 (298)
.+++.+|.++ ||.|-++..+++.|.+.+|+.+++
T Consensus 43 ~~~~~~v~ll-------G~~~~~~~~~~~~l~~~yp~l~i~ 76 (171)
T cd06533 43 AQKGLRVFLL-------GAKPEVLEKAAERLRARYPGLKIV 76 (171)
T ss_pred HHcCCeEEEE-------CCCHHHHHHHHHHHHHHCCCcEEE
Confidence 4446788763 899999999999999999998753
No 130
>PF05762 VWA_CoxE: VWA domain containing CoxE-like protein; InterPro: IPR008912 This group of proteins contains a VWA type domain and the function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon in several bacteria [].
Probab=25.06 E-value=1.2e+02 Score=26.76 Aligned_cols=47 Identities=11% Similarity=0.187 Sum_probs=39.5
Q ss_pred ccCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 30 RRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 30 ~~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
|++++.++.++-|--|.+-|....++.++.++...++..++++|.+.
T Consensus 53 r~~~~~~lvvl~DvSGSM~~~s~~~l~~~~~l~~~~~~~~~f~F~~~ 99 (222)
T PF05762_consen 53 RPRKPRRLVVLCDVSGSMAGYSEFMLAFLYALQRQFRRVRVFVFSTR 99 (222)
T ss_pred ccCCCccEEEEEeCCCChHHHHHHHHHHHHHHHHhCCCEEEEEEeee
Confidence 66666699999999999999888888999999999888877777643
No 131
>PF06024 DUF912: Nucleopolyhedrovirus protein of unknown function (DUF912); InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=24.56 E-value=59 Score=25.19 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=15.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH---hhhccC
Q 022349 4 YGILIWAVITAVLASILILASHV---HNARRN 32 (298)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 32 (298)
+.++++.+++-+|+++.+.++.+ .|.|.+
T Consensus 61 ~~iili~lls~v~IlVily~IyYFVILRer~~ 92 (101)
T PF06024_consen 61 GNIILISLLSFVCILVILYAIYYFVILRERQK 92 (101)
T ss_pred ccchHHHHHHHHHHHHHHhhheEEEEEecccc
Confidence 34556666666666665544433 444443
No 132
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=24.04 E-value=1.2e+02 Score=22.27 Aligned_cols=24 Identities=4% Similarity=0.115 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc
Q 022349 7 LIWAVITAVLASILILASHVHNAR 30 (298)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~ 30 (298)
.+++.+..|+++++.+-+++|+..
T Consensus 5 fl~~plivf~ifVap~WL~lHY~s 28 (75)
T PF06667_consen 5 FLFVPLIVFMIFVAPIWLILHYRS 28 (75)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556667778877766665543
No 133
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=22.45 E-value=77 Score=32.63 Aligned_cols=26 Identities=12% Similarity=-0.065 Sum_probs=22.7
Q ss_pred cEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 270 PAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 270 ~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
..+..++||..||+.+++++ +..++.
T Consensus 390 ~~ig~v~Rl~~yKr~dLil~-~i~~l~ 415 (601)
T TIGR02094 390 LTIGFARRFATYKRADLIFR-DLERLA 415 (601)
T ss_pred cEEEEEEcchhhhhHHHHHH-HHHHHH
Confidence 47889999999999999988 877764
No 134
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=21.99 E-value=5.6e+02 Score=23.49 Aligned_cols=37 Identities=11% Similarity=0.083 Sum_probs=26.5
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 36 SVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 36 ~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
||.|+.+.. . |==-...-++++|.+.+|++++.+.|.
T Consensus 1 rILii~~~~--i-GD~i~~~p~l~~Lk~~~P~a~I~~l~~ 37 (334)
T TIGR02195 1 KILVIGPSW--V-GDMVMAQSLYRLLKKRYPQAVIDVLAP 37 (334)
T ss_pred CEEEEccch--h-HHHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 466666654 1 444555678899999999999888774
No 135
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=21.50 E-value=5.4e+02 Score=23.90 Aligned_cols=40 Identities=8% Similarity=0.091 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 34 ~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
+++|.++.++. . |=--...-+...|++.+|++++.+.+..
T Consensus 1 ~~kIliir~~~-i--GD~vlt~p~~~~lk~~~P~a~i~~~~~~ 40 (334)
T COG0859 1 MMKILVIRLSK-L--GDVVLTLPLLRTLKKAYPNAKIDVLVPK 40 (334)
T ss_pred CceEEEEeccc-h--hHHHhHHHHHHHHHHHCCCCEEEEEecc
Confidence 47899999885 2 5556667788999999999998887754
Done!