Query 022349
Match_columns 298
No_of_seqs 120 out of 863
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:03:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 99.6 9.1E-14 3.1E-18 130.6 17.8 244 33-297 1-279 (439)
2 3c48_A Predicted glycosyltrans 99.5 3.4E-13 1.2E-17 127.6 19.2 229 31-296 17-269 (438)
3 2r60_A Glycosyl transferase, g 99.5 1.1E-13 3.7E-18 134.0 16.0 238 33-296 6-288 (499)
4 3okp_A GDP-mannose-dependent a 99.5 3.8E-13 1.3E-17 124.8 17.8 209 33-297 3-225 (394)
5 2iw1_A Lipopolysaccharide core 99.5 1.1E-12 3.7E-17 121.0 17.0 208 35-296 1-222 (374)
6 2gek_A Phosphatidylinositol ma 99.4 2.7E-12 9.4E-17 119.6 16.7 215 30-297 16-236 (406)
7 2iuy_A Avigt4, glycosyltransfe 99.4 9.1E-12 3.1E-16 114.2 17.6 172 34-295 3-187 (342)
8 2jjm_A Glycosyl transferase, g 99.4 8.6E-12 2.9E-16 116.6 16.3 202 46-297 25-238 (394)
9 2x6q_A Trehalose-synthase TRET 99.4 1.2E-11 4.1E-16 116.4 17.0 212 27-297 33-258 (416)
10 3oy2_A Glycosyltransferase B73 99.4 6.7E-12 2.3E-16 117.9 13.6 199 35-296 1-210 (413)
11 2qzs_A Glycogen synthase; glyc 99.3 7E-11 2.4E-15 113.5 17.1 81 216-297 199-319 (485)
12 1rzu_A Glycogen synthase 1; gl 99.3 1.9E-11 6.4E-16 117.5 12.2 82 215-297 200-318 (485)
13 3s28_A Sucrose synthase 1; gly 99.1 9.7E-10 3.3E-14 113.4 15.2 82 215-297 468-599 (816)
14 2x0d_A WSAF; GT4 family, trans 99.0 2.7E-09 9.4E-14 101.8 13.4 78 216-296 187-268 (413)
15 1f0k_A MURG, UDP-N-acetylgluco 98.8 4.1E-08 1.4E-12 90.2 12.6 197 35-296 7-210 (364)
16 3vue_A GBSS-I, granule-bound s 98.7 1.5E-06 5.3E-11 85.6 20.1 81 216-297 236-354 (536)
17 3beo_A UDP-N-acetylglucosamine 98.6 7.6E-08 2.6E-12 88.6 7.4 75 220-296 149-233 (375)
18 2vsy_A XCC0866; transferase, g 98.4 8.8E-07 3E-11 86.6 10.7 188 31-296 202-401 (568)
19 2hy7_A Glucuronosyltransferase 98.3 3.4E-06 1.2E-10 79.8 10.5 66 215-284 172-237 (406)
20 1vgv_A UDP-N-acetylglucosamine 98.1 1.1E-05 3.6E-10 74.5 9.4 76 219-296 139-233 (384)
21 1v4v_A UDP-N-acetylglucosamine 97.9 6.9E-05 2.4E-09 68.9 11.4 76 219-296 144-225 (376)
22 2xci_A KDO-transferase, 3-deox 97.4 0.0046 1.6E-07 57.5 16.0 74 215-297 147-221 (374)
23 1uqt_A Alpha, alpha-trehalose- 97.3 0.00047 1.6E-08 67.0 7.8 53 244-297 219-282 (482)
24 3otg_A CALG1; calicheamicin, T 97.2 0.011 3.8E-07 54.6 15.8 44 28-76 14-57 (412)
25 3nb0_A Glycogen [starch] synth 97.2 0.00077 2.6E-08 68.0 7.9 80 215-296 254-359 (725)
26 3t5t_A Putative glycosyltransf 96.6 0.0066 2.2E-07 59.1 8.9 111 159-297 171-307 (496)
27 3s2u_A UDP-N-acetylglucosamine 96.5 0.072 2.5E-06 49.1 15.5 128 122-296 74-207 (365)
28 3dzc_A UDP-N-acetylglucosamine 96.0 0.029 9.9E-07 52.5 10.1 213 32-296 23-258 (396)
29 2iyf_A OLED, oleandomycin glyc 95.1 0.56 1.9E-05 43.4 15.0 38 34-76 7-44 (430)
30 3ot5_A UDP-N-acetylglucosamine 95.0 0.072 2.5E-06 50.0 8.7 75 220-296 168-252 (403)
31 4fzr_A SSFS6; structural genom 94.0 0.42 1.4E-05 43.8 11.3 42 29-75 10-51 (398)
32 2p6p_A Glycosyl transferase; X 93.3 1.9 6.6E-05 39.0 14.4 37 35-76 1-37 (384)
33 3tsa_A SPNG, NDP-rhamnosyltran 89.6 1.6 5.5E-05 39.5 9.6 37 34-75 1-37 (391)
34 3ia7_A CALG4; glycosysltransfe 89.4 12 0.00039 33.6 15.6 36 35-75 5-40 (402)
35 3rsc_A CALG2; TDP, enediyne, s 86.2 19 0.00065 32.5 17.4 40 31-75 17-56 (415)
36 2bfw_A GLGA glycogen synthase; 85.2 0.69 2.3E-05 37.7 3.8 27 269-296 36-63 (200)
37 4hwg_A UDP-N-acetylglucosamine 84.0 5.9 0.0002 36.6 10.1 74 220-296 145-233 (385)
38 3oti_A CALG3; calicheamicin, T 79.4 9.5 0.00032 34.5 9.6 40 31-75 17-56 (398)
39 3rhz_A GTF3, nucleotide sugar 78.3 4.8 0.00016 36.7 7.1 63 214-280 126-189 (339)
40 2iya_A OLEI, oleandomycin glyc 55.0 1E+02 0.0035 27.7 11.1 39 33-76 11-49 (424)
41 2gt1_A Lipopolysaccharide hept 50.3 77 0.0026 27.6 9.2 39 35-76 1-39 (326)
42 2l8s_A Integrin alpha-1; trans 42.1 46 0.0016 22.0 4.6 15 3-17 4-18 (54)
43 1psw_A ADP-heptose LPS heptosy 41.7 1.7E+02 0.0059 25.3 11.3 37 220-259 260-296 (348)
44 3tov_A Glycosyl transferase fa 40.2 1.7E+02 0.0059 25.9 10.0 42 32-76 6-47 (349)
45 2knc_A Integrin alpha-IIB; tra 37.8 53 0.0018 21.7 4.4 12 6-17 10-21 (54)
46 4gyw_A UDP-N-acetylglucosamine 28.3 2.1E+02 0.0071 28.5 9.1 38 135-172 309-349 (723)
47 3c01_A Surface presentation of 27.8 73 0.0025 20.4 3.7 11 218-228 38-48 (48)
48 3bzy_A ESCU; auto cleavage pro 23.9 93 0.0032 20.5 3.7 11 218-228 44-54 (54)
49 3h4t_A Glycosyltransferase GTF 23.6 3.4E+02 0.012 24.1 9.1 25 269-294 222-247 (404)
50 2k1a_A Integrin alpha-IIB; sin 23.4 1.2E+02 0.0041 18.8 4.0 11 7-17 9-19 (42)
51 4amg_A Snogd; transferase, pol 23.1 3.7E+02 0.013 23.3 15.0 40 32-76 20-59 (400)
52 2ks1_B Epidermal growth factor 22.6 96 0.0033 19.5 3.4 11 25-35 33-43 (44)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.56 E-value=9.1e-14 Score=130.64 Aligned_cols=244 Identities=15% Similarity=0.034 Sum_probs=133.2
Q ss_pred CCcEEEEEcCCCC--CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccc--------eeecCCCeE
Q 022349 33 RTTSVAFFHPNTN--DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFG--------VELLHPPKV 102 (298)
Q Consensus 33 ~~~~Va~~Hp~l~--~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~--------~~l~~~~~~ 102 (298)
++|||+++.+.+. ..||+|+++.+++++|++. |++|.++|+..+...+......+- ++ ......+++
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gv~v 77 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASL--GHEVLVFTPSHGRFQGEEIGKIRV-FGEEVQVKVSYEERGNLRI 77 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT--TCEEEEEEECTTCSCCEEEEEEEE-TTEEEEEEEEEEEETTEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhccccc-cCcccceeeeeccCCCceE
Confidence 5899999998742 3699999999999999997 577788886532111000000000 00 001222233
Q ss_pred EEccccceeecccCC-chhH-HHHH--HH-HHHHHHHHH--hccCCcEEEeCCCccccccc--ccccCCeEEEEeecCCc
Q 022349 103 VHLYRRKWIEESTYP-RFTM-IGQS--FG-SVYLSWEAL--CKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTI 173 (298)
Q Consensus 103 i~l~~~~~~~~~~~~-~~~l-~~~~--l~-~~~~a~~~l--~~~~pDv~i~s~~~~~~~p~--~~~~~~~~i~Y~H~P~~ 173 (298)
..+..........++ ...- ..+. +. .+....+.+ +..+||+++.........+. ++..+.|+|..+|....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 78 YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp EEEESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred EEecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 333221111111111 0000 1111 11 111112222 24589988865432222221 22458899999998651
Q ss_pred chHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCC
Q 022349 174 SLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP 252 (298)
Q Consensus 174 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPP 252 (298)
.. +.. .+..... ++...+.......+...+.+|.++++|+.+++.....++. +.++.||+++
T Consensus 158 ~~------------~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ng 220 (439)
T 3fro_A 158 SK------------LPA-FYFHEAG----LSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNG 220 (439)
T ss_dssp CC------------EEH-HHHHHTT----CGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCC
T ss_pred cc------------Cch-HHhCccc----cccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCC
Confidence 10 000 0000000 0000000000224456678999999999999997776654 6789999999
Q ss_pred CCCCcccccCCCC-------------C-CCCcEEEEEcCCC-CccChHHHHHHHHHhhhh
Q 022349 253 CDTSGLQVLPLER-------------S-TEYPAIISVAQFR-PEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 253 vd~~~~~~~~~~~-------------~-~~~~~iLsvgRl~-p~Kn~~l~I~~Afa~~~~ 297 (298)
+|.+.+...+... . .++..++++||+. ++|+++.+|+ |++++.+
T Consensus 221 vd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~-a~~~l~~ 279 (439)
T 3fro_A 221 IDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLK-AIEILSS 279 (439)
T ss_dssp CCTTTSCGGGSCSCHHHHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHH-HHHHHHT
T ss_pred CCchhcCcccccchhhhhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHH-HHHHHHh
Confidence 9998886321000 0 1137899999999 9999999999 9998754
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.53 E-value=3.4e-13 Score=127.62 Aligned_cols=229 Identities=14% Similarity=0.087 Sum_probs=127.8
Q ss_pred cCCCcEEEEEcCCCC--------CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeE
Q 022349 31 RNRTTSVAFFHPNTN--------DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKV 102 (298)
Q Consensus 31 ~~~~~~Va~~Hp~l~--------~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~ 102 (298)
..++|||+|+.++.. ..||+|+++.+++++|.+. +++|.++|...+... ... ......+++
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~----~~~-----~~~~~~v~v 85 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ--GIEVDIYTRATRPSQ----GEI-----VRVAENLRV 85 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT--TCEEEEEEECCCGGG----CSE-----EEEETTEEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc--CCEEEEEecCCCCCC----ccc-----ccccCCeEE
Confidence 456789999997652 3599999999999999987 577777775431000 000 011222233
Q ss_pred EEccccceeecccCCchhHHHHHHHHHH-HHHHH-Hhcc-CCcEEEeCCCcccccc--cccccCCeEEEEeecCCcchHH
Q 022349 103 VHLYRRKWIEESTYPRFTMIGQSFGSVY-LSWEA-LCKF-TPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPTISLDM 177 (298)
Q Consensus 103 i~l~~~~~~~~~~~~~~~l~~~~l~~~~-~a~~~-l~~~-~pDv~i~s~~~~~~~p--~~~~~~~~~i~Y~H~P~~~~~~ 177 (298)
+.+...... ..+...+. ..+..+. ...+. ++.. +||+++.........+ +++..+.|.|..+|....
T Consensus 86 ~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~---- 157 (438)
T 3c48_A 86 INIAAGPYE---GLSKEELP-TQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA---- 157 (438)
T ss_dssp EEECCSCSS---SCCGGGGG-GGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHH----
T ss_pred EEecCCCcc---ccchhHHH-HHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcc----
Confidence 333211100 00111111 1110000 01122 2333 4998885432111111 122347899999998641
Q ss_pred hhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCC
Q 022349 178 ISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTS 256 (298)
Q Consensus 178 ~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~ 256 (298)
+... .+. . ........ .....++..+.+|.|+++|+++++.+.+.||. ..++.||++++|.+
T Consensus 158 ----~~~~-~~~------~---~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~ 220 (438)
T 3c48_A 158 ----VKNS-YRD------D---SDTPESEA---RRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVE 220 (438)
T ss_dssp ----HHSC-C-------------CCHHHHH---HHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTT
T ss_pred ----cccc-ccc------c---cCCcchHH---HHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCcccc
Confidence 0000 000 0 00001111 12234567788999999999999999999986 46789999999988
Q ss_pred cccccCCCC----------CCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 257 GLQVLPLER----------STEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 257 ~~~~~~~~~----------~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.+...+... ..++..++++||+.++|+++.+|+ |++.+.
T Consensus 221 ~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~-a~~~l~ 269 (438)
T 3c48_A 221 LYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIK-AVAALF 269 (438)
T ss_dssp TSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHH-HHHHHH
T ss_pred ccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHH-HHHHHH
Confidence 776321110 112578999999999999999999 998875
No 3
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.53 E-value=1.1e-13 Score=134.01 Aligned_cols=238 Identities=16% Similarity=0.081 Sum_probs=132.8
Q ss_pred CCcEEEEEcCCC------------CCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCCh-hHHHHhhccccceee--c
Q 022349 33 RTTSVAFFHPNT------------NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFP-DSLLARAVDRFGVEL--L 97 (298)
Q Consensus 33 ~~~~Va~~Hp~l------------~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~-~~~~~~~~~~f~~~l--~ 97 (298)
++|||+++.++. ...||+|+++.+++++|.+. +++|.++|...+... +......+ .+ .
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~-----~~~~~ 78 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM--GVQVDIITRRIKDENWPEFSGEID-----YYQET 78 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT--TCEEEEEEECCCBTTBGGGCCSEE-----ECTTC
T ss_pred ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc--CCeEEEEeCCCCcccccchhhhHH-----hccCC
Confidence 368999999853 23699999999999999997 577778775431110 00000000 01 1
Q ss_pred CCCeEEEccccceeecccCCchhHHHHHHHHHH-HHHHHHhc--cCCcEEEeCCCcccccc--cccccCCeEEEEeecCC
Q 022349 98 HPPKVVHLYRRKWIEESTYPRFTMIGQSFGSVY-LSWEALCK--FTPLYYFDTSGYAFTYP--LARIFGCRVICYTHYPT 172 (298)
Q Consensus 98 ~~~~~i~l~~~~~~~~~~~~~~~l~~~~l~~~~-~a~~~l~~--~~pDv~i~s~~~~~~~p--~~~~~~~~~i~Y~H~P~ 172 (298)
..++++.+.... ....+... ++..+.... ...+.+++ .+||+++.........+ +++..+.|+|..+|...
T Consensus 79 ~gv~v~~~~~~~---~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~ 154 (499)
T 2r60_A 79 NKVRIVRIPFGG---DKFLPKEE-LWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLG 154 (499)
T ss_dssp SSEEEEEECCSC---SSCCCGGG-CGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCH
T ss_pred CCeEEEEecCCC---cCCcCHHH-HHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCcc
Confidence 222333322110 00001111 111111111 11233444 47999886532211111 12235889999999854
Q ss_pred cchHHhhhhhcccccccchhhhhhchhhhHHHHHHHH-HHHHHHHHhccCCcEEEEcCHHHHHHHHHH--hC------CC
Q 022349 173 ISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYT-FFSWMYGLVGSCADLAMVNSSWTQSHIEKL--WG------IP 243 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~-~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~--~g------~~ 243 (298)
... . .... .. ......+...+.. ....+.+...+.+|.|+++|+++++.+.+. || .+
T Consensus 155 ~~~-~-~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~ 220 (499)
T 2r60_A 155 AQK-M-EKLN------VN------TSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDD 220 (499)
T ss_dssp HHH-H-HTTC------CC------STTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCG
T ss_pred ccc-c-hhhc------cC------CCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCC
Confidence 100 0 0000 00 0000111111111 122335677889999999999999999998 76 34
Q ss_pred CCceEEcCCCCCCcccccCCC----------------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 244 DRIKRVYPPCDTSGLQVLPLE----------------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~~~~----------------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
.++.||++++|.+.+...+.. ...+..+++++||+.++||++.+|+ |++.+.
T Consensus 221 ~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~-a~~~l~ 288 (499)
T 2r60_A 221 DKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVE-AYVQNK 288 (499)
T ss_dssp GGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHH-HHHTCH
T ss_pred CCeEEECCCcChhhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHH-HHHHHH
Confidence 578999999999887632110 1112578999999999999999999 998875
No 4
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.52 E-value=3.8e-13 Score=124.76 Aligned_cols=209 Identities=14% Similarity=0.092 Sum_probs=126.9
Q ss_pred CCcEEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEcccccee
Q 022349 33 RTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWI 111 (298)
Q Consensus 33 ~~~~Va~~Hp~l~-~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~ 111 (298)
++|||+|+.+.+. ..||+|+++.+++++| .+++|.++|.... .. .........+. .++.+....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L----~g~~v~v~~~~~~--~~-~~~~~~~~~~~------~~~~~~~~~-- 67 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ----DPESIVVFASTQN--AE-EAHAYDKTLDY------EVIRWPRSV-- 67 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS----CGGGEEEEEECSS--HH-HHHHHHTTCSS------EEEEESSSS--
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh----cCCeEEEEECCCC--cc-chhhhccccce------EEEEccccc--
Confidence 5789999998553 4699999999999998 2577788876531 11 00111111122 233322111
Q ss_pred ecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--cccccCCe-EEEEeecCCcchHHhhhhhcccccc
Q 022349 112 EESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LARIFGCR-VICYTHYPTISLDMISRVREGSSMY 188 (298)
Q Consensus 112 ~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~~~~~~~~-~i~Y~H~P~~~~~~~~~~~~~~~~y 188 (298)
..+..... ....+.+++.+||+++.......... .++..+.| +|..+|.... -|. .
T Consensus 68 ---~~~~~~~~-------~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------~~~----~ 126 (394)
T 3okp_A 68 ---MLPTPTTA-------HAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV-------GWS----M 126 (394)
T ss_dssp ---CCSCHHHH-------HHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-------HHT----T
T ss_pred ---cccchhhH-------HHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-------hhh----h
Confidence 11111111 11233466788998885433221111 12223554 7888886541 010 0
Q ss_pred cchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc-CCC---
Q 022349 189 NNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL-PLE--- 264 (298)
Q Consensus 189 ~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~-~~~--- 264 (298)
. ......+++..+.+|.++++|+++++.+++.++.+.++.||++++|.+.+... +..
T Consensus 127 -----------~--------~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~ 187 (394)
T 3okp_A 127 -----------L--------PGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSA 187 (394)
T ss_dssp -----------S--------HHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHH
T ss_pred -----------c--------chhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHH
Confidence 0 11122245556789999999999999999999855688999999999887631 000
Q ss_pred ------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 ------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 ------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
-..+...++++||+.++|+++.+|+ |++++.+
T Consensus 188 ~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~-a~~~l~~ 225 (394)
T 3okp_A 188 TRKKLGFTDTTPVIACNSRLVPRKGQDSLIK-AMPQVIA 225 (394)
T ss_dssp HHHHTTCCTTCCEEEEESCSCGGGCHHHHHH-HHHHHHH
T ss_pred HHHhcCCCcCceEEEEEeccccccCHHHHHH-HHHHHHh
Confidence 0122478999999999999999999 9987753
No 5
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.47 E-value=1.1e-12 Score=121.05 Aligned_cols=208 Identities=11% Similarity=0.036 Sum_probs=117.1
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
|||+++.++....||+|+++.+++++|++. +++|.++|...+.. .++.+++..+....
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~---------------~~~~~~v~~~~~~~----- 58 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAAR--GHHVRVYTQSWEGD---------------CPKAFELIQVPVKS----- 58 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHT--TCCEEEEESEECSC---------------CCTTCEEEECCCCC-----
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhC--CCeEEEEecCCCCC---------------CCCCcEEEEEccCc-----
Confidence 689999887545799999999999999997 56677777542110 01112222222110
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhcccccccchhhh
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASI 194 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~ 194 (298)
+.. ............+.+++.+||+++...... ..+ +.+....... ..++.. +.
T Consensus 59 -~~~---~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~~-~~~---------~~~~~~~~~~----~~~~~~---~~----- 112 (374)
T 2iw1_A 59 -HTN---HGRNAEYYAWVQNHLKEHPADRVVGFNKMP-GLD---------VYFAADVCYA----EKVAQE---KG----- 112 (374)
T ss_dssp -SSH---HHHHHHHHHHHHHHHHHSCCSEEEESSCCT-TCS---------EEECCSCCHH----HHHHHH---CC-----
T ss_pred -ccc---hhhHHHHHHHHHHHHhccCCCEEEEecCCC-Cce---------eeeccccccc----eeeeec---cc-----
Confidence 111 111111111123345678999888543211 111 1111111100 001000 00
Q ss_pred hhchhhhHHHHHHHHHHHHHHHHhc--cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCC------
Q 022349 195 AQSNWLSQCKIVYYTFFSWMYGLVG--SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLER------ 265 (298)
Q Consensus 195 ~~~~~~~~~k~~y~~~~~~~~~~~~--~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~------ 265 (298)
+...... .++.+..+.+... +.+|.++++|+++++.+.+.||. ..++.|+++++|.+.+...+...
T Consensus 113 ----~~~~~~~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~ 187 (374)
T 2iw1_A 113 ----FLYRLTS-RYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYR 187 (374)
T ss_dssp ----HHHHTSH-HHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHH
T ss_pred ----chhhhcH-HHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHH
Confidence 0000000 0112222233333 37999999999999999999986 45789999999988775321100
Q ss_pred -----CCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 266 -----STEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 266 -----~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
..++..++++||+.++|+++.+++ |++.+.
T Consensus 188 ~~~~~~~~~~~i~~~G~~~~~K~~~~li~-a~~~l~ 222 (374)
T 2iw1_A 188 QKNGIKEQQNLLLQVGSDFGRKGVDRSIE-ALASLP 222 (374)
T ss_dssp HHTTCCTTCEEEEEECSCTTTTTHHHHHH-HHHTSC
T ss_pred HHhCCCCCCeEEEEeccchhhcCHHHHHH-HHHHhH
Confidence 122478999999999999999999 998764
No 6
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.43 E-value=2.7e-12 Score=119.64 Aligned_cols=215 Identities=11% Similarity=0.038 Sum_probs=124.2
Q ss_pred ccCCCcEEEEEcCCCC-CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEcccc
Q 022349 30 RRNRTTSVAFFHPNTN-DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (298)
Q Consensus 30 ~~~~~~~Va~~Hp~l~-~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~ 108 (298)
+..++|||+|+.++.. ..||+|+++.+++++|.+. +++|.+++....... ..+ +.. ... +++.+...
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~------~~~-~~~-~~~--~~~~~~~~ 83 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPHVK------LPD-YVV-SGG--KAVPIPYN 83 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTTSC------CCT-TEE-ECC--CCC-----
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC--CCeEEEEecCCcccc------CCc-ccc-cCC--cEEecccc
Confidence 3456789999999864 4499999999999999997 577778775432110 000 000 000 01111100
Q ss_pred ceeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc--ccccCCeEEEEeecCCcchHHhhhhhcccc
Q 022349 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL--ARIFGCRVICYTHYPTISLDMISRVREGSS 186 (298)
Q Consensus 109 ~~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~--~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~ 186 (298)
.. ..++..... ......+.+++.+||+++........... ++..+.|.|.++|......
T Consensus 84 ~~-----~~~~~~~~~---~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------- 144 (406)
T 2gek_A 84 GS-----VARLRFGPA---THRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS----------- 144 (406)
T ss_dssp ------------CCHH---HHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH-----------
T ss_pred CC-----cccccccHH---HHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh-----------
Confidence 00 000000000 01111233566789977754433222221 2234789999999854100
Q ss_pred cccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCC-
Q 022349 187 MYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLER- 265 (298)
Q Consensus 187 ~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~- 265 (298)
.....+.+. .+...+.+|.++++|+++++.+.+.++ ..++ |+++++|.+.+...+...
T Consensus 145 ---------------~~~~~~~~~----~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~-vi~~~v~~~~~~~~~~~~~ 203 (406)
T 2gek_A 145 ---------------LTLSVFQGI----LRPYHEKIIGRIAVSDLARRWQMEALG-SDAV-EIPNGVDVASFADAPLLDG 203 (406)
T ss_dssp ---------------HHHHHHHST----THHHHTTCSEEEESSHHHHHHHHHHHS-SCEE-ECCCCBCHHHHHTCCCCTT
T ss_pred ---------------hhHHHHHHH----HHHHHhhCCEEEECCHHHHHHHHHhcC-CCcE-EecCCCChhhcCCCchhhh
Confidence 001111111 235678999999999999999999887 3456 999999977665321111
Q ss_pred -CCCCcEEEEEcCC-CCccChHHHHHHHHHhhhh
Q 022349 266 -STEYPAIISVAQF-RPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 266 -~~~~~~iLsvgRl-~p~Kn~~l~I~~Afa~~~~ 297 (298)
+.+...++++||+ .++|+++.+|+ |+..+.+
T Consensus 204 ~~~~~~~i~~~G~~~~~~Kg~~~li~-a~~~l~~ 236 (406)
T 2gek_A 204 YPREGRTVLFLGRYDEPRKGMAVLLA-ALPKLVA 236 (406)
T ss_dssp CSCSSCEEEEESCTTSGGGCHHHHHH-HHHHHHT
T ss_pred ccCCCeEEEEEeeeCccccCHHHHHH-HHHHHHH
Confidence 1123699999999 99999999999 9988753
No 7
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.40 E-value=9.1e-12 Score=114.21 Aligned_cols=172 Identities=15% Similarity=0.019 Sum_probs=117.4
Q ss_pred CcEEEEEcCC--------C-----CCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCC
Q 022349 34 TTSVAFFHPN--------T-----NDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPP 100 (298)
Q Consensus 34 ~~~Va~~Hp~--------l-----~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~ 100 (298)
+|||+++.+. + ...||+|+++.+++++|.+. ++++.+++....... .+ +..
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~--G~~v~v~~~~~~~~~-------~~--~~~----- 66 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLEL--GHEVFLLGAPGSPAG-------RP--GLT----- 66 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHT--TCEEEEESCTTSCCC-------ST--TEE-----
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHc--CCeEEEEecCCCCCC-------CC--cce-----
Confidence 5899999998 2 24699999999999999987 677788775431110 00 111
Q ss_pred eEEEccccceeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhh
Q 022349 101 KVVHLYRRKWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISR 180 (298)
Q Consensus 101 ~~i~l~~~~~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~ 180 (298)
+.. .+.. . ...+.+++.+||+++...... ....++..+.| |..+|....
T Consensus 67 -~~~-----------~~~~---~-------~l~~~l~~~~~Dvi~~~~~~~-~~~~~~~~~~p-v~~~h~~~~------- 115 (342)
T 2iuy_A 67 -VVP-----------AGEP---E-------EIERWLRTADVDVVHDHSGGV-IGPAGLPPGTA-FISSHHFTT------- 115 (342)
T ss_dssp -ECS-----------CCSH---H-------HHHHHHHHCCCSEEEECSSSS-SCSTTCCTTCE-EEEEECSSS-------
T ss_pred -ecc-----------CCcH---H-------HHHHHHHhcCCCEEEECCchh-hHHHHhhcCCC-EEEecCCCC-------
Confidence 110 0100 0 112335667899888765432 12223345789 999998661
Q ss_pred hhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccc
Q 022349 181 VREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQV 260 (298)
Q Consensus 181 ~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~ 260 (298)
+. ..+|.++++|+++++.+.+ + .++.||++++|.+.+..
T Consensus 116 -------~~------------------------------~~~d~ii~~S~~~~~~~~~--~--~~~~vi~ngvd~~~~~~ 154 (342)
T 2iuy_A 116 -------RP------------------------------VNPVGCTYSSRAQRAHCGG--G--DDAPVIPIPVDPARYRS 154 (342)
T ss_dssp -------BC------------------------------SCCTTEEESCHHHHHHTTC--C--TTSCBCCCCBCGGGSCC
T ss_pred -------Cc------------------------------ccceEEEEcCHHHHHHHhc--C--CceEEEcCCCChhhcCc
Confidence 00 0199999999999999988 4 78999999999887763
Q ss_pred cCCCCCCCCcEEEEEcCCCCccChHHHHHHHHHhh
Q 022349 261 LPLERSTEYPAIISVAQFRPEKVRYKLISTRYYSY 295 (298)
Q Consensus 261 ~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~ 295 (298)
.+.. ..++++++++||+.++|+++.+|+ |+++.
T Consensus 155 ~~~~-~~~~~~i~~vG~~~~~Kg~~~li~-a~~~~ 187 (342)
T 2iuy_A 155 AADQ-VAKEDFLLFMGRVSPHKGALEAAA-FAHAC 187 (342)
T ss_dssp STTC-CCCCSCEEEESCCCGGGTHHHHHH-HHHHH
T ss_pred cccc-CCCCCEEEEEeccccccCHHHHHH-HHHhc
Confidence 2211 112578999999999999999999 98764
No 8
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.38 E-value=8.6e-12 Score=116.59 Aligned_cols=202 Identities=13% Similarity=0.052 Sum_probs=116.8
Q ss_pred CCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecccCCchhHHHHH
Q 022349 46 DGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEESTYPRFTMIGQS 125 (298)
Q Consensus 46 ~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~~~~~~~l~~~~ 125 (298)
..||+|+++.+++++|.+. +++|.++|...+... ....+ +. .+..+...... ....+...
T Consensus 25 ~~GG~~~~~~~la~~L~~~--G~~V~v~~~~~~~~~----~~~~~--~i------~~~~~~~~~~~-~~~~~~~~----- 84 (394)
T 2jjm_A 25 SVGGSGVVGTELGKQLAER--GHEIHFITSGLPFRL----NKVYP--NI------YFHEVTVNQYS-VFQYPPYD----- 84 (394)
T ss_dssp --CHHHHHHHHHHHHHHHT--TCEEEEECSSCC--------CCCT--TE------EEECCCCC-----CCSCCHH-----
T ss_pred CCCCHHHHHHHHHHHHHhC--CCEEEEEeCCCCCcc----cccCC--ce------EEEeccccccc-cccccccc-----
Confidence 4699999999999999987 577788875431110 00000 11 12211110000 00001111
Q ss_pred HHHHHHHHHHHhccCCcEEEeCCCcccccc--ccc-cc--CCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhh
Q 022349 126 FGSVYLSWEALCKFTPLYYFDTSGYAFTYP--LAR-IF--GCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWL 200 (298)
Q Consensus 126 l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~~~-~~--~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 200 (298)
+.......+.+++.+||+++.........+ ++. .. +.|+|..+|.... .. +.. .
T Consensus 85 ~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~------~~------~~~---------~ 143 (394)
T 2jjm_A 85 LALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI------TV------LGS---------D 143 (394)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH------HT------TTT---------C
T ss_pred HHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc------cc------cCC---------C
Confidence 111111233456788998886543322222 222 22 5899999997431 00 000 0
Q ss_pred hHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC-------CCCCCcEEE
Q 022349 201 SQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE-------RSTEYPAII 273 (298)
Q Consensus 201 ~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~-------~~~~~~~iL 273 (298)
...+ .+.+...+.+|.++++|+++++.+.+.++.+.++.|+++++|.+.+...+.. -..++..++
T Consensus 144 ~~~~--------~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (394)
T 2jjm_A 144 PSLN--------NLIRFGIEQSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILI 215 (394)
T ss_dssp TTTH--------HHHHHHHHHSSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTTCC---CEEE
T ss_pred HHHH--------HHHHHHHhhCCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcCCCCCCeEEE
Confidence 0011 1134456779999999999999999998754689999999998877532110 002257899
Q ss_pred EEcCCCCccChHHHHHHHHHhhhh
Q 022349 274 SVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 274 svgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
++||+.++|+++.+|+ |++.+.+
T Consensus 216 ~~G~~~~~Kg~~~li~-a~~~l~~ 238 (394)
T 2jjm_A 216 HISNFRKVKRVQDVVQ-AFAKIVT 238 (394)
T ss_dssp EECCCCGGGTHHHHHH-HHHHHHH
T ss_pred EeeccccccCHHHHHH-HHHHHHh
Confidence 9999999999999999 9998754
No 9
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.38 E-value=1.2e-11 Score=116.42 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=118.2
Q ss_pred hhhccCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEcc
Q 022349 27 HNARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLY 106 (298)
Q Consensus 27 ~~~~~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~ 106 (298)
...+.-++|||+++.+.. .+||+|+++.+++++|.+. ++++.+++...+ . ......+. +...+.. .+...
T Consensus 33 ~~~~~~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~--G~~v~v~~~~~~--~-~~~~~~~~-~~~~~~~-~~~~~-- 102 (416)
T 2x6q_A 33 EKAEKLKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSI--GIEARWFVIEGP--T-EFFNVTKT-FHNALQG-NESLK-- 102 (416)
T ss_dssp HHHHTTTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHT--TCEEEEEECCCC--H-HHHHHHHH-HHHHHTT-CCSCC--
T ss_pred HhhhhhhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhC--CCeEEEEEccCC--c-chhhhhcc-cceeecc-ccccc--
Confidence 344556789999999998 5799999999999999987 577666664331 1 11110000 0000000 00000
Q ss_pred ccceeecccCCchhHHHHHHHHH-HHHHHHHhccCCcEEEeCCCcccccccccccCCeEEEEeecCCcchHHhhhhhccc
Q 022349 107 RRKWIEESTYPRFTMIGQSFGSV-YLSWEALCKFTPLYYFDTSGYAFTYPLARIFGCRVICYTHYPTISLDMISRVREGS 185 (298)
Q Consensus 107 ~~~~~~~~~~~~~~l~~~~l~~~-~~a~~~l~~~~pDv~i~s~~~~~~~p~~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~ 185 (298)
.+. . .+..+... ....+.++..+||+++.................|+|.++|....
T Consensus 103 ---------~~~-~-~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p~v~~~h~~~~------------ 159 (416)
T 2x6q_A 103 ---------LTE-E-MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLS------------ 159 (416)
T ss_dssp ---------CCH-H-HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSCEEEECCSCCS------------
T ss_pred ---------ccH-H-HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCCEEEEEccccC------------
Confidence 010 0 01111111 11122345668998886544332222111124789999997541
Q ss_pred ccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcE-EEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCC
Q 022349 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADL-AMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLE 264 (298)
Q Consensus 186 ~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~-viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~ 264 (298)
.. . + .+++.+ ++...++|. ++++|++.++. +. ..++.||++++|.+.+...+..
T Consensus 160 --~~----------~---~-~~~~~~----~~~~~~~~~~i~~~s~~~~~~----~~-~~~~~vi~ngvd~~~~~~~~~~ 214 (416)
T 2x6q_A 160 --SP----------N---R-EFWEFL----RRFVEKYDRYIFHLPEYVQPE----LD-RNKAVIMPPSIDPLSEKNVELK 214 (416)
T ss_dssp --SC----------C---H-HHHHHH----HHHHTTSSEEEESSGGGSCTT----SC-TTTEEECCCCBCTTSTTTSCCC
T ss_pred --Cc----------c---H-HHHHHH----HHHHHhCCEEEEechHHHHhh----CC-ccceEEeCCCCChhhhcccccC
Confidence 00 0 0 111212 223345555 55888887653 22 2578999999998766421110
Q ss_pred ------------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 ------------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 ------------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
-..++..++++||+.++|+++.+|+ |++.+.+
T Consensus 215 ~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~-a~~~l~~ 258 (416)
T 2x6q_A 215 QTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIE-IYRKVKE 258 (416)
T ss_dssp HHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHH-HHHHHHH
T ss_pred hhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHH-HHHHHHH
Confidence 0122578999999999999999999 9988753
No 10
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.35 E-value=6.7e-12 Score=117.92 Aligned_cols=199 Identities=11% Similarity=-0.010 Sum_probs=119.9
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
|||+|+++.....||+|+++.+++++|++. ++|.+++.... .. ................+ ..
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~---~~V~v~~~~~~-g~-------------~~~~~~~~~~~~~~~~~-~~ 62 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA---HEVIVFGIHAF-GR-------------SVHANIEEFDAQTAEHV-RG 62 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT---SEEEEEEESCC-SC-------------CSCSSSEEEEHHHHHHH-TT
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc---CCeEEEeecCC-Cc-------------ccccccccCCccccccc-cc
Confidence 799999998888899999999999999886 56666664321 00 00000000000000000 00
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCccccccc-cccc----CCeEEEEeecCCcchHHhhhhhccccccc
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARIF----GCRVICYTHYPTISLDMISRVREGSSMYN 189 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p~-~~~~----~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~ 189 (298)
..+ ....+..+ .+.++..+||+++.........+. .... ..+.+.++|...- ..
T Consensus 63 ~~~-~~~~~~~l------~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 121 (413)
T 3oy2_A 63 LNE-QGFYYSGL------SEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSK--------------NI 121 (413)
T ss_dssp CCS-TTCCHHHH------HHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSB--------------SC
T ss_pred ccc-ccchHHHH------HHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccch--------------hh
Confidence 000 01111111 233567789988855222222222 1122 2456777775440 00
Q ss_pred chhhhhhchhhhHHHHHHHHHHHHHHHHhccCCc--EEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc----CC
Q 022349 190 NNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCAD--LAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL----PL 263 (298)
Q Consensus 190 ~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad--~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~----~~ 263 (298)
... .++..+++| .++++|+++++.+++ +|.+.++.||++++|.+.+... ..
T Consensus 122 ----------~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~~~~~~~~~~ 178 (413)
T 3oy2_A 122 ----------REN------------LWWIFSHPKVVGVMAMSKCWISDICN-YGCKVPINIVSHFVDTKTIYDARKLVGL 178 (413)
T ss_dssp ----------CGG------------GGGGGGCTTEEEEEESSTHHHHHHHH-TTCCSCEEECCCCCCCCCCTTHHHHTTC
T ss_pred ----------HHH------------HHHHHhccCCceEEEcCHHHHHHHHH-cCCCCceEEeCCCCCHHHHHHHHHhcCC
Confidence 000 245677888 999999999999999 6655789999999999877421 11
Q ss_pred CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 264 ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 264 ~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
....++..++++||+.++|+++.+|+ ||+++.
T Consensus 179 ~~~~~~~~il~vGr~~~~Kg~~~li~-a~~~l~ 210 (413)
T 3oy2_A 179 SEYNDDVLFLNMNRNTARKRLDIYVL-AAARFI 210 (413)
T ss_dssp GGGTTSEEEECCSCSSGGGTHHHHHH-HHHHHH
T ss_pred CcccCceEEEEcCCCchhcCcHHHHH-HHHHHH
Confidence 11112578999999999999999999 999875
No 11
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.29 E-value=7e-11 Score=113.53 Aligned_cols=81 Identities=14% Similarity=0.028 Sum_probs=62.7
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHH-hCCC-----------CCceEEcCCCCCCcccccCC--------------------
Q 022349 216 GLVGSCADLAMVNSSWTQSHIEKL-WGIP-----------DRIKRVYPPCDTSGLQVLPL-------------------- 263 (298)
Q Consensus 216 ~~~~~~ad~viaNS~~Ta~~i~~~-~g~~-----------~~~~VIYPPvd~~~~~~~~~-------------------- 263 (298)
+...+.+|.++++|+++++.+.+. +|.+ .++.||++++|.+.+.....
T Consensus 199 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 2qzs_A 199 KAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKR 278 (485)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHH
T ss_pred HHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHH
Confidence 445667999999999999999886 5521 67899999999888753210
Q ss_pred --------CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 264 --------ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 264 --------~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
....+...++++||+.++|+++.+|+ |++++.+
T Consensus 279 ~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~-a~~~l~~ 319 (485)
T 2qzs_A 279 QLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLE-ALPGLLE 319 (485)
T ss_dssp HHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHH-HHHHHHH
T ss_pred HHHHHcCCCCCCCCeEEEEeccCccccCHHHHHH-HHHHHhh
Confidence 00012478999999999999999999 9998753
No 12
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.28 E-value=1.9e-11 Score=117.52 Aligned_cols=82 Identities=9% Similarity=-0.063 Sum_probs=62.8
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHH-hC--------C-CCCceEEcCCCCCCcccccCCC--------------------
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKL-WG--------I-PDRIKRVYPPCDTSGLQVLPLE-------------------- 264 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~-~g--------~-~~~~~VIYPPvd~~~~~~~~~~-------------------- 264 (298)
.+...+.+|.++++|+++++.+.+. || . +.++.||++++|.+.+......
T Consensus 200 ~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 1rzu_A 200 LKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKA 279 (485)
T ss_dssp HHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHH
T ss_pred HHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHH
Confidence 3445667999999999999999885 44 2 4678999999998877532100
Q ss_pred -------CCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 265 -------RSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 265 -------~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
...++..++++||+.++|+++.+|+ |++++.+
T Consensus 280 ~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~-a~~~l~~ 318 (485)
T 1rzu_A 280 VAEHFRIDDDGSPLFCVISRLTWQKGIDLMAE-AVDEIVS 318 (485)
T ss_dssp HHHHHTCCCSSSCEEEEESCBSTTTTHHHHHT-THHHHHH
T ss_pred HHHhcCCCCCCCeEEEEEccCccccCHHHHHH-HHHHHHh
Confidence 0001458999999999999999999 9988753
No 13
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.10 E-value=9.7e-10 Score=113.41 Aligned_cols=82 Identities=15% Similarity=0.101 Sum_probs=62.0
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCC----------------------CCCceEEcCCCCCCcccccCCCC-------
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGI----------------------PDRIKRVYPPCDTSGLQVLPLER------- 265 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~----------------------~~~~~VIYPPvd~~~~~~~~~~~------- 265 (298)
.+.+.+.||.||++|...++.+++.++. ..++.||+|.||.+.|.......
T Consensus 468 E~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~ 547 (816)
T 3s28_A 468 DIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFH 547 (816)
T ss_dssp HHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGH
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhcc
Confidence 4567889999999999999975443221 12889999999999886321000
Q ss_pred ---------------------CCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 266 ---------------------STEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 266 ---------------------~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..++++++++||+.++||++.+|+ ||+++.+
T Consensus 548 ~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIe-A~~~L~~ 599 (816)
T 3s28_A 548 SEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVE-WYGKNTR 599 (816)
T ss_dssp HHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHH-HHHHCHH
T ss_pred ccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHH-HHHHHHh
Confidence 123579999999999999999999 9998753
No 14
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.01 E-value=2.7e-09 Score=101.80 Aligned_cols=78 Identities=10% Similarity=0.022 Sum_probs=57.1
Q ss_pred HHhccCCc--EEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCC-CCccChHHHHHHH
Q 022349 216 GLVGSCAD--LAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQF-RPEKVRYKLISTR 291 (298)
Q Consensus 216 ~~~~~~ad--~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl-~p~Kn~~l~I~~A 291 (298)
+...+.++ .+++||+++++.+++. |. ..+..+++|++|.+.+....... .++..++++||+ .++|+++.+|+ |
T Consensus 187 ~~~~~~~~~~~vi~~S~~~~~~l~~~-g~~~~~~~~i~~g~d~~~~~~~~~~~-~~~~~il~~gr~~~~~Kg~~~li~-A 263 (413)
T 2x0d_A 187 ESTYKYRGPQIAVFNSELLKQYFNNK-GYNFTDEYFFQPKINTTLKNYINDKR-QKEKIILVYGRPSVKRNAFTLIVE-A 263 (413)
T ss_dssp HHTTSCCSCEEEEEESHHHHHHHHHH-TCCCSEEEEECCCCCHHHHTTTTSCC-CCCSEEEEEECTTCGGGCHHHHHH-H
T ss_pred HHHhccCCceEEEEcCHHHHHHHHHc-CCCCCceEEeCCCcCchhhccccccc-CCCCEEEEEecCchhccCHHHHHH-H
Confidence 44555544 6999999999999986 43 25678899999876543211111 125689999997 68999999999 9
Q ss_pred HHhhh
Q 022349 292 YYSYL 296 (298)
Q Consensus 292 fa~~~ 296 (298)
|+++.
T Consensus 264 ~~~l~ 268 (413)
T 2x0d_A 264 LKIFV 268 (413)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 15
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.80 E-value=4.1e-08 Score=90.22 Aligned_cols=197 Identities=10% Similarity=0.004 Sum_probs=108.7
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEccccceeecc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKWIEES 114 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~~~~~ 114 (298)
|||+|+. . ..||.++.+.+++++|++. +++|.++|.... ... ..+++ .+.+ +..+....+....
T Consensus 7 mkIl~~~--~-~~gG~~~~~~~la~~L~~~--G~~V~v~~~~~~-~~~---~~~~~-~g~~------~~~~~~~~~~~~~ 70 (364)
T 1f0k_A 7 KRLMVMA--G-GTGGHVFPGLAVAHHLMAQ--GWQVRWLGTADR-MEA---DLVPK-HGIE------IDFIRISGLRGKG 70 (364)
T ss_dssp CEEEEEC--C-SSHHHHHHHHHHHHHHHTT--TCEEEEEECTTS-THH---HHGGG-GTCE------EEECCCCCCTTCC
T ss_pred cEEEEEe--C-CCccchhHHHHHHHHHHHc--CCEEEEEecCCc-chh---hhccc-cCCc------eEEecCCccCcCc
Confidence 7999996 2 4589999999999999886 577777775431 111 11111 1222 2222211000000
Q ss_pred cCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc-c-ccccCCeEEEEeecCCcchHHhhhhhcccccccchh
Q 022349 115 TYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP-L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNA 192 (298)
Q Consensus 115 ~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p-~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~ 192 (298)
....+...+..+.......+.+++.+||+++.......... + ++..+.|.+...|... .
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~----------------~--- 131 (364)
T 1f0k_A 71 IKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI----------------A--- 131 (364)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS----------------C---
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC----------------C---
Confidence 00000111111112222234466778998887644321111 1 2345788887777532 0
Q ss_pred hhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccC----CCCCCC
Q 022349 193 SIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLP----LERSTE 268 (298)
Q Consensus 193 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~----~~~~~~ 268 (298)
+.. .++..+.+|.+++.|+.+ ++ +..|+++|++.+.+.... +....+
T Consensus 132 --------~~~-----------~~~~~~~~d~v~~~~~~~-------~~---~~~~i~n~v~~~~~~~~~~~~~~~~~~~ 182 (364)
T 1f0k_A 132 --------GLT-----------NKWLAKIATKVMQAFPGA-------FP---NAEVVGNPVRTDVLALPLPQQRLAGREG 182 (364)
T ss_dssp --------CHH-----------HHHHTTTCSEEEESSTTS-------SS---SCEECCCCCCHHHHTSCCHHHHHTTCCS
T ss_pred --------cHH-----------HHHHHHhCCEEEecChhh-------cC---CceEeCCccchhhcccchhhhhcccCCC
Confidence 000 123456799999988754 43 678999999876553210 001111
Q ss_pred CcEE-EEEcCCCCccChHHHHHHHHHhhh
Q 022349 269 YPAI-ISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 269 ~~~i-LsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
++++ ++.||+.++|+.+.+++ |++++.
T Consensus 183 ~~~il~~~g~~~~~k~~~~li~-a~~~l~ 210 (364)
T 1f0k_A 183 PVRVLVVGGSQGARILNQTMPQ-VAAKLG 210 (364)
T ss_dssp SEEEEEECTTTCCHHHHHHHHH-HHHHHG
T ss_pred CcEEEEEcCchHhHHHHHHHHH-HHHHhc
Confidence 3444 46679999999999999 998764
No 16
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.67 E-value=1.5e-06 Score=85.56 Aligned_cols=81 Identities=11% Similarity=-0.004 Sum_probs=63.2
Q ss_pred HHhccCCcEEEEcCHHHHHHHHHHhCC---------CCCceEEcCCCCCCccccc-----CC------------------
Q 022349 216 GLVGSCADLAMVNSSWTQSHIEKLWGI---------PDRIKRVYPPCDTSGLQVL-----PL------------------ 263 (298)
Q Consensus 216 ~~~~~~ad~viaNS~~Ta~~i~~~~g~---------~~~~~VIYPPvd~~~~~~~-----~~------------------ 263 (298)
+.....||.|+++|...+++|.+.++. ..++.+|++.||++.+... +.
T Consensus 236 k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l 315 (536)
T 3vue_A 236 KAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEAL 315 (536)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHH
Confidence 345567999999999999999987652 3578999999999887521 00
Q ss_pred ------CCCCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 264 ------ERSTEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 264 ------~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
..+.+.+.+++|||+.++|+++++|+ |++++++
T Consensus 316 ~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~-a~~~l~~ 354 (536)
T 3vue_A 316 QAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAA-AIPELMQ 354 (536)
T ss_dssp HHHTTSCCCTTSCEEEEECCBSGGGCHHHHHH-HHHHHTT
T ss_pred HHhcCCCCCCCCcEEEEEeeccccCChHHHHH-HHHHhHh
Confidence 00122479999999999999999999 9998764
No 17
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.58 E-value=7.6e-08 Score=88.64 Aligned_cols=75 Identities=11% Similarity=0.051 Sum_probs=53.4
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCC-CCCCcccccC-CC----CC-CCCc-EEEEEcCCCCc-cChHHHHH
Q 022349 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPP-CDTSGLQVLP-LE----RS-TEYP-AIISVAQFRPE-KVRYKLIS 289 (298)
Q Consensus 220 ~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPP-vd~~~~~~~~-~~----~~-~~~~-~iLsvgRl~p~-Kn~~l~I~ 289 (298)
+.+|.+++.|+++++.+.+. |. +.++.|+++| +|...+.... .. .+ .+++ .++++||++++ |+++.+|+
T Consensus 149 ~~~d~ii~~s~~~~~~~~~~-g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~ 227 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQKE-NKDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGEPMRNMFR 227 (375)
T ss_dssp HHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTHHHHHHHH
T ss_pred hhhheeeCCCHHHHHHHHHc-CCCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchhHHHHHHH
Confidence 34999999999999999874 75 4568899998 6654332110 00 00 1133 45699999986 99999999
Q ss_pred HHHHhhh
Q 022349 290 TRYYSYL 296 (298)
Q Consensus 290 ~Afa~~~ 296 (298)
|++++.
T Consensus 228 -a~~~l~ 233 (375)
T 3beo_A 228 -AIKRLV 233 (375)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 998764
No 18
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.42 E-value=8.8e-07 Score=86.57 Aligned_cols=188 Identities=13% Similarity=0.092 Sum_probs=105.2
Q ss_pred cCCCcEEEEEcCCCCCCChHHHHHHHHHHH--HHHhCCCCeEEEEccCCCCChhHHHHhhccccceeecCCCeEEEcccc
Q 022349 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKA--IQEESPDLDCIVYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRR 108 (298)
Q Consensus 31 ~~~~~~Va~~Hp~l~~~GGaErV~~~l~~a--L~~~~~~~~v~iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~ 108 (298)
+.+++||+++.+++. .||+|+++.++++. +.+ .++++.+|+...+. .+.....++.. + .+..+.
T Consensus 202 ~~~~~rI~~~~~~~~-~~g~~~~~~~l~~~L~~~~--~~~~v~~~~~~~~~-~~~~~~~~~~~-~-------~~~~~~-- 267 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFG-AHPTGLLTVALFEALQRRQ--PDLQMHLFATSGDD-GSTLRTRLAQA-S-------TLHDVT-- 267 (568)
T ss_dssp SSSCEEEEEEESCSS-SSHHHHHHHHHHHHHHHHC--TTEEEEEEESSCCC-SCHHHHHHHHT-S-------EEEECT--
T ss_pred CCCCeEEEEECcccc-cChHHHHHHHHHhhccCCc--ccEEEEEEECCCCC-ccHHHHHHHhc-C-------eEEECC--
Confidence 467789999999995 68999999999999 544 36888888854211 11122222211 1 122211
Q ss_pred ceeecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccc--cccccccCCeEEEEee-cCCcchHHhhhhhccc
Q 022349 109 KWIEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFT--YPLARIFGCRVICYTH-YPTISLDMISRVREGS 185 (298)
Q Consensus 109 ~~~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~--~p~~~~~~~~~i~Y~H-~P~~~~~~~~~~~~~~ 185 (298)
+ .. ..+ ..+.+++.+||++++..++... .++......|++...| +|...
T Consensus 268 --------~-~~-~~~-------l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 319 (568)
T 2vsy_A 268 --------A-LG-HLA-------TAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAPVQVNWLAYPGTS----------- 319 (568)
T ss_dssp --------T-CC-HHH-------HHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSSEEEEESSSSSCC-----------
T ss_pred --------C-CC-HHH-------HHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCceeEeeecCCccc-----------
Confidence 0 00 111 1233567889999976554322 2221112345544333 44410
Q ss_pred ccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc----cc
Q 022349 186 SMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ----VL 261 (298)
Q Consensus 186 ~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~----~~ 261 (298)
. . + ......+|.++++|+..++ |+ .++.||++..+..... ..
T Consensus 320 ---~----------~---~-----------~~~~~~~d~~i~~s~~~~~-----~~--~~i~~ipn~~~~~~~~~~~~~~ 365 (568)
T 2vsy_A 320 ---G----------A---P-----------WMDYVLGDAFALPPALEPF-----YS--EHVLRLQGAFQPSDTSRVVAEP 365 (568)
T ss_dssp ---C----------C---T-----------TCCEEEECTTTSCTTTGGG-----CS--SEEEECSSCSCCCCTTCCCCCC
T ss_pred ---C----------C---C-----------CceEEEECCCcCCcccccC-----Cc--ceeEcCCCcCCCCCCCCCCCCC
Confidence 0 0 0 0011247888899987654 55 6778887644322110 00
Q ss_pred CCCC---CCCCcEEEEEcCCCCccChHHHHHHHHHhhh
Q 022349 262 PLER---STEYPAIISVAQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 262 ~~~~---~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~ 296 (298)
+... -.++.+++++||+.+ |+++.+|+ ||++++
T Consensus 366 ~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~-a~~~l~ 401 (568)
T 2vsy_A 366 PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMA-RMLAVL 401 (568)
T ss_dssp CCTGGGTCCTTSCEEEECCCGG-GCCHHHHH-HHHHHH
T ss_pred CCccccCCCCCCEEEEeCCccc-cCCHHHHH-HHHHHH
Confidence 1100 012457889999999 99999999 999875
No 19
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.27 E-value=3.4e-06 Score=79.75 Aligned_cols=66 Identities=12% Similarity=-0.050 Sum_probs=51.1
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCcccccCCCCCCCCcEEEEEcCCCCccCh
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVLPLERSTEYPAIISVAQFRPEKVR 284 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~ 284 (298)
.+++.+.+|.|+++|++.++.+.+.. ++.||++++|.+.+.........++..++++||+.++|++
T Consensus 172 ~~~~~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~ 237 (406)
T 2hy7_A 172 FDRVAPTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSPYAEGIHAVAVGSMLFDPEF 237 (406)
T ss_dssp HHHHGGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCSCCSSEEEEEECCTTBCHHH
T ss_pred HHHHHHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccccCCCcEEEEEeccccccCH
Confidence 56678899999999999998876542 7899999999988753211111113689999999999998
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.08 E-value=1.1e-05 Score=74.49 Aligned_cols=76 Identities=7% Similarity=-0.073 Sum_probs=52.8
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCccccc--------------CCC-CCCCCc-EEEEEcCCCC
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVL--------------PLE-RSTEYP-AIISVAQFRP 280 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPv-d~~~~~~~--------------~~~-~~~~~~-~iLsvgRl~p 280 (298)
.+.+|.+++.|+++++.+.+ +|. +.++.|+++|+ |...+... .+. -..+++ .++++||+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~ 217 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRES 217 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSS
T ss_pred HhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCCccc
Confidence 45699999999999999987 575 45688999885 32111100 000 101133 5679999998
Q ss_pred c-cChHHHHHHHHHhhh
Q 022349 281 E-KVRYKLISTRYYSYL 296 (298)
Q Consensus 281 ~-Kn~~l~I~~Afa~~~ 296 (298)
+ |+++.+++ |++++.
T Consensus 218 ~~kg~~~li~-a~~~l~ 233 (384)
T 1vgv_A 218 FGRGFEEICH-ALADIA 233 (384)
T ss_dssp CCHHHHHHHH-HHHHHH
T ss_pred cchHHHHHHH-HHHHHH
Confidence 7 99999999 998764
No 21
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=97.91 E-value=6.9e-05 Score=68.93 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=51.7
Q ss_pred ccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCcccc--cCCCCC-CCCc-EEEEEcCCCCccChHHHHHHHH
Q 022349 219 GSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQV--LPLERS-TEYP-AIISVAQFRPEKVRYKLISTRY 292 (298)
Q Consensus 219 ~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPv-d~~~~~~--~~~~~~-~~~~-~iLsvgRl~p~Kn~~l~I~~Af 292 (298)
.+.+|.+++.|+.+++.+.+. |. +.++.|+++|+ |...+.. ...... .+++ .++++||++++|+++.+|+ |+
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~~-g~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~ll~-a~ 221 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLKE-GKREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQ-AL 221 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHTT-TCCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHH-HH
T ss_pred HHHhceeeCCCHHHHHHHHHc-CCCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHHHH-HH
Confidence 345899999999999999885 75 45678888876 3211100 000000 1133 4568999999999999999 99
Q ss_pred Hhhh
Q 022349 293 YSYL 296 (298)
Q Consensus 293 a~~~ 296 (298)
+++.
T Consensus 222 ~~l~ 225 (376)
T 1v4v_A 222 KRVA 225 (376)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 22
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.41 E-value=0.0046 Score=57.52 Aligned_cols=74 Identities=7% Similarity=-0.036 Sum_probs=51.6
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCC-CCCcccccCCCCCCCCcEEEEEcCCCCccChHHHHHHHHH
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRPEKVRYKLISTRYY 293 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPv-d~~~~~~~~~~~~~~~~~iLsvgRl~p~Kn~~l~I~~Afa 293 (298)
+++..+.+|.|++.|+.+++.+.+. |.+ ++.|++++. +.+. . + ....+++.+++.|+ .+|+++.+|+ ||+
T Consensus 147 ~~~~~~~~d~ii~~S~~~~~~l~~~-g~~-ki~vi~n~~f~~~~-~--~-~~~l~~~vi~~~~~--~~k~~~~ll~-A~~ 217 (374)
T 2xci_A 147 EKILSKKFDLIIMRTQEDVEKFKTF-GAK-RVFSCGNLKFICQK-G--K-GIKLKGEFIVAGSI--HTGEVEIILK-AFK 217 (374)
T ss_dssp HHHHHTTCSEEEESCHHHHHHHHTT-TCC-SEEECCCGGGCCCC-C--S-CCCCSSCEEEEEEE--CGGGHHHHHH-HHH
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHc-CCC-eEEEcCCCccCCCc-C--h-hhhhcCCEEEEEeC--CCchHHHHHH-HHH
Confidence 4556678999999999999999885 754 788887663 1110 0 1 11111356777775 5799999999 999
Q ss_pred hhhh
Q 022349 294 SYLD 297 (298)
Q Consensus 294 ~~~~ 297 (298)
++++
T Consensus 218 ~l~~ 221 (374)
T 2xci_A 218 EIKK 221 (374)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8753
No 23
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=97.29 E-value=0.00047 Score=66.97 Aligned_cols=53 Identities=17% Similarity=0.091 Sum_probs=39.6
Q ss_pred CCceEEcCCCCCCccccc---CCC-------C-CCCCcEEEEEcCCCCccChHHHHHHHHHhhhh
Q 022349 244 DRIKRVYPPCDTSGLQVL---PLE-------R-STEYPAIISVAQFRPEKVRYKLISTRYYSYLD 297 (298)
Q Consensus 244 ~~~~VIYPPvd~~~~~~~---~~~-------~-~~~~~~iLsvgRl~p~Kn~~l~I~~Afa~~~~ 297 (298)
.++.|+++.||++.|... +.. + -.+++++++|||+.++||++.+|+ ||+++++
T Consensus 219 ~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~-A~~~ll~ 282 (482)
T 1uqt_A 219 FRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFL-AYEALLE 282 (482)
T ss_dssp EEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHH-HHHHHHH
T ss_pred EEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccCCHHHHHH-HHHHHHH
Confidence 357889999998877521 100 0 012578999999999999999999 9998764
No 24
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=97.19 E-value=0.011 Score=54.61 Aligned_cols=44 Identities=18% Similarity=0.134 Sum_probs=31.0
Q ss_pred hhccCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 28 NARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 28 ~~~~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
..+..++|||.|+-. .++|...-+..++++|++. +++|.++|+.
T Consensus 14 ~~~~~~~MrIl~~~~---~~~Gh~~~~~~la~~L~~~--GheV~v~~~~ 57 (412)
T 3otg_A 14 GHIEGRHMRVLFASL---GTHGHTYPLLPLATAARAA--GHEVTFATGE 57 (412)
T ss_dssp ----CCSCEEEEECC---SSHHHHGGGHHHHHHHHHT--TCEEEEEECG
T ss_pred CCcccceeEEEEEcC---CCcccHHHHHHHHHHHHHC--CCEEEEEccH
Confidence 445667799999873 3567777788999999997 5777777753
No 25
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=97.15 E-value=0.00077 Score=67.99 Aligned_cols=80 Identities=11% Similarity=0.002 Sum_probs=59.4
Q ss_pred HHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc------------CC------------CCCCCC-
Q 022349 215 YGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL------------PL------------ERSTEY- 269 (298)
Q Consensus 215 ~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~------------~~------------~~~~~~- 269 (298)
.+..+..||.|+++|.++++.++.+++.+.+ .||++.+|++.|.+. .. .-..++
T Consensus 254 EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d-~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~ 332 (725)
T 3nb0_A 254 ERAAAHSADVFTTVSQITAFEAEHLLKRKPD-GILPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNT 332 (725)
T ss_dssp HHHHHHHSSEEEESSHHHHHHHHHHTSSCCS-EECCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGE
T ss_pred HHHHHHhCCEEEECCHHHHHHHHHHhcCCCC-EEEcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCce
Confidence 4566779999999999999999999985333 459999999887521 00 000012
Q ss_pred cEEEEEcCCC-CccChHHHHHHHHHhhh
Q 022349 270 PAIISVAQFR-PEKVRYKLISTRYYSYL 296 (298)
Q Consensus 270 ~~iLsvgRl~-p~Kn~~l~I~~Afa~~~ 296 (298)
.++..+||++ +.|.+|++|+ |++++.
T Consensus 333 liifivgRle~~nKGiDl~ie-Al~~L~ 359 (725)
T 3nb0_A 333 LYFFIAGRYEYKNKGADMFIE-ALARLN 359 (725)
T ss_dssp EEEEEESSCCTTTTTHHHHHH-HHHHHH
T ss_pred eEEEEEEEeccccCCHHHHHH-HHHHHH
Confidence 3444589999 8899999999 998764
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=96.57 E-value=0.0066 Score=59.14 Aligned_cols=111 Identities=9% Similarity=0.006 Sum_probs=67.6
Q ss_pred ccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHH
Q 022349 159 IFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEK 238 (298)
Q Consensus 159 ~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~ 238 (298)
.++.++.+++|.|.=+.++.+.+. ..++. .++ ...-.+|+|.-.+.--++++.+
T Consensus 171 ~~~~~igfFlHiPfPs~e~f~~Lp------------------~~~r~---ell-----~gll~~DligF~t~~y~~~Fl~ 224 (496)
T 3t5t_A 171 RPDAPILLFVHIPWPSADYWRILP------------------KEIRT---GIL-----HGMLPATTIGFFADRWCRNFLE 224 (496)
T ss_dssp CTTSCEEEECCSCCCCHHHHTTSC------------------HHHHH---HHH-----HHHTTSSEEEESSHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCCCHHHHhhCc------------------HhHHH---HHH-----HHHHhCCEEEEecHHHHHHHHH
Confidence 467899999998864444332220 00010 011 2234688888888766555433
Q ss_pred ----Hh-CC--------------CCCceEEcCCCCCCcccccCCC--CC-----CCCcEEEEEcCCCCccChHHHHHHHH
Q 022349 239 ----LW-GI--------------PDRIKRVYPPCDTSGLQVLPLE--RS-----TEYPAIISVAQFRPEKVRYKLISTRY 292 (298)
Q Consensus 239 ----~~-g~--------------~~~~~VIYPPvd~~~~~~~~~~--~~-----~~~~~iLsvgRl~p~Kn~~l~I~~Af 292 (298)
.. |. ..++.|+++-||++.|.....+ .. ++++++|+|||+++.|+++..|+ ||
T Consensus 225 ~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~-Af 303 (496)
T 3t5t_A 225 SVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWADGHRLVVHSGRTDPIKNAERAVR-AF 303 (496)
T ss_dssp HHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHTTSEEEEEEEESSGGGCHHHHHH-HH
T ss_pred HHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhCCceEEEEcccCccccCHHHHHH-HH
Confidence 33 31 1245677888999888642111 00 13579999999999999999999 99
Q ss_pred Hhhhh
Q 022349 293 YSYLD 297 (298)
Q Consensus 293 a~~~~ 297 (298)
++++
T Consensus 304 -~ll~ 307 (496)
T 3t5t_A 304 -VLAA 307 (496)
T ss_dssp -HHHH
T ss_pred -HHHH
Confidence 7764
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=96.53 E-value=0.072 Score=49.12 Aligned_cols=128 Identities=13% Similarity=0.091 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--c-ccccCCeEEEEeecCCcchHHhhhhhcccccccchhhhhhch
Q 022349 122 IGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSMYNNNASIAQSN 198 (298)
Q Consensus 122 ~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~y~~~~~~~~~~ 198 (298)
.++.+..+..+.+.+++.+||+++.+.++. ..| + +++.+.|++. |-++. +
T Consensus 74 ~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~-s~p~~laA~~~~iP~vi--he~n~--------------~---------- 126 (365)
T 3s2u_A 74 PLELLKSLFQALRVIRQLRPVCVLGLGGYV-TGPGGLAARLNGVPLVI--HEQNA--------------V---------- 126 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEECSSST-HHHHHHHHHHTTCCEEE--EECSS--------------S----------
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCCcc-hHHHHHHHHHcCCCEEE--Eecch--------------h----------
Confidence 444444445556668889999999886654 334 2 3456888875 54330 0
Q ss_pred hhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccccc--CCCCCCCCc-EEEEE
Q 022349 199 WLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQVL--PLERSTEYP-AIISV 275 (298)
Q Consensus 199 ~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~~~--~~~~~~~~~-~iLsv 275 (298)
.+.. -++..+.+|.|+....-+ +....+..++-+|+..+.+... ......+++ .+++-
T Consensus 127 -~G~~-----------nr~l~~~a~~v~~~~~~~-------~~~~~k~~~~g~pvr~~~~~~~~~~~~~~~~~~~ilv~g 187 (365)
T 3s2u_A 127 -AGTA-----------NRSLAPIARRVCEAFPDT-------FPASDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLG 187 (365)
T ss_dssp -CCHH-----------HHHHGGGCSEEEESSTTS-------SCC---CEECCCCCCGGGCCCTTSSCCCTTSCCEEEECC
T ss_pred -hhhH-----------HHhhccccceeeeccccc-------ccCcCcEEEECCCCchhhccchhhhcccCCCCcEEEEEC
Confidence 1111 122345678877664422 2213456677788876544321 111111133 44555
Q ss_pred cCCCCccChHHHHHHHHHhhh
Q 022349 276 AQFRPEKVRYKLISTRYYSYL 296 (298)
Q Consensus 276 gRl~p~Kn~~l~I~~Afa~~~ 296 (298)
|.+-.++..+.+++ |++.+.
T Consensus 188 Gs~g~~~~~~~~~~-al~~l~ 207 (365)
T 3s2u_A 188 GSLGAEPLNKLLPE-ALAQVP 207 (365)
T ss_dssp TTTTCSHHHHHHHH-HHHTSC
T ss_pred CcCCccccchhhHH-HHHhcc
Confidence 78888888888888 887653
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=96.05 E-value=0.029 Score=52.53 Aligned_cols=213 Identities=11% Similarity=0.029 Sum_probs=106.5
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEE-EEccCCCCChhHHHHhhccccceeecCCCeEEEccccce
Q 022349 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCI-VYTGDHDAFPDSLLARAVDRFGVELLHPPKVVHLYRRKW 110 (298)
Q Consensus 32 ~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~-iyT~~~~~~~~~~~~~~~~~f~~~l~~~~~~i~l~~~~~ 110 (298)
.+++||+++- |..-|.-+. ..++++|++. ++.++. +.|+.+ . + +.+..-+.|+++.+ ..|..-
T Consensus 23 ~~m~ki~~v~---Gtr~~~~~~-a~li~~l~~~-~~~~~~~~~tG~h-~--~-~~~~~~~~~~i~~~-----~~l~~~-- 86 (396)
T 3dzc_A 23 NAMKKVLIVF---GTRPEAIKM-APLVQQLCQD-NRFVAKVCVTGQH-R--E-MLDQVLELFSITPD-----FDLNIM-- 86 (396)
T ss_dssp -CCEEEEEEE---CSHHHHHHH-HHHHHHHHHC-TTEEEEEEECCSS-S--H-HHHHHHHHTTCCCS-----EECCCC--
T ss_pred CCCCeEEEEE---eccHhHHHH-HHHHHHHHhC-CCCcEEEEEeccc-H--H-HHHHHHHhcCCCCc-----eeeecC--
Confidence 4567899874 333355455 4678898875 566664 566554 1 1 11222223554211 111110
Q ss_pred eecccCCchhHHHHHHHHHHHHHHHHhccCCcEEEeCCCcccccc--c-ccccCCeEEEEeecCCcchHHhhhhhccccc
Q 022349 111 IEESTYPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYP--L-ARIFGCRVICYTHYPTISLDMISRVREGSSM 187 (298)
Q Consensus 111 ~~~~~~~~~~l~~~~l~~~~~a~~~l~~~~pDv~i~s~~~~~~~p--~-~~~~~~~~i~Y~H~P~~~~~~~~~~~~~~~~ 187 (298)
. ...++..+....+.-..+.+++.+||+++...+...+.+ + ++..+.|++. +|.+. +. |+.
T Consensus 87 -~----~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~------rs-~~~--- 150 (396)
T 3dzc_A 87 -E----PGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGL------RT-GNI--- 150 (396)
T ss_dssp -C----TTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCC------CC-SCT---
T ss_pred -C----CCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEE-EECCc------cc-ccc---
Confidence 0 001111111112222234467889998876544333344 2 2345788653 44433 11 110
Q ss_pred ccchhhhhhchhhhHHHHHHHHHHHHHHHHhccCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCCCC-Cccccc----
Q 022349 188 YNNNASIAQSNWLSQCKIVYYTFFSWMYGLVGSCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPCDT-SGLQVL---- 261 (298)
Q Consensus 188 y~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPvd~-~~~~~~---- 261 (298)
|+ ++. ....+++ +.+.+|.+++.|+..++.+.+. |+ +.++.|+.+|+.. ..+...
T Consensus 151 ~~--------~~~---~~~~r~~-------~~~~a~~~~~~se~~~~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~ 211 (396)
T 3dzc_A 151 YS--------PWP---EEGNRKL-------TAALTQYHFAPTDTSRANLLQE-NYNAENIFVTGNTVIDALLAVREKIHT 211 (396)
T ss_dssp TS--------STT---HHHHHHH-------HHHTCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHH
T ss_pred cc--------CCc---HHHHHHH-------HHHhcCEEECCCHHHHHHHHHc-CCCcCcEEEECCcHHHHHHHhhhhccc
Confidence 10 001 1111111 2456999999999999999874 75 4567788777621 111000
Q ss_pred ----------CCCC-CCCCcEEE-EEcCCC-CccChHHHHHHHHHhhh
Q 022349 262 ----------PLER-STEYPAII-SVAQFR-PEKVRYKLISTRYYSYL 296 (298)
Q Consensus 262 ----------~~~~-~~~~~~iL-svgRl~-p~Kn~~l~I~~Afa~~~ 296 (298)
.+.- ..+++++| +.+|.. ..|+++.+++ |++++.
T Consensus 212 ~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~-A~~~l~ 258 (396)
T 3dzc_A 212 DMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQ-ALITTA 258 (396)
T ss_dssp CHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTHHHHHHH-HHHHHH
T ss_pred chhhHHHHHHHhCccCCCCCEEEEEECCcccchhHHHHHHH-HHHHHH
Confidence 0110 01135554 566754 4588999999 998764
No 29
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=95.06 E-value=0.56 Score=43.36 Aligned_cols=38 Identities=8% Similarity=0.052 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 34 ~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
++||.|+ +. ..+|-...+..++++|++. +++|.+.|+.
T Consensus 7 m~kIl~~-~~--~~~Gh~~p~~~la~~L~~~--G~~V~~~~~~ 44 (430)
T 2iyf_A 7 PAHIAMF-SI--AAHGHVNPSLEVIRELVAR--GHRVTYAIPP 44 (430)
T ss_dssp -CEEEEE-CC--SCHHHHGGGHHHHHHHHHT--TCEEEEEECG
T ss_pred cceEEEE-eC--CCCccccchHHHHHHHHHC--CCeEEEEeCH
Confidence 4689987 32 3467778889999999987 6777777754
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=95.03 E-value=0.072 Score=50.01 Aligned_cols=75 Identities=9% Similarity=0.040 Sum_probs=47.2
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCcccccCC--CC---C-CCCcE-EEEEcCCCC-ccChHHHHH
Q 022349 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQVLPL--ER---S-TEYPA-IISVAQFRP-EKVRYKLIS 289 (298)
Q Consensus 220 ~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPv-d~~~~~~~~~--~~---~-~~~~~-iLsvgRl~p-~Kn~~l~I~ 289 (298)
+.+|.+++.|+..++.+.+. |+ +.++.|+.+|+ |...+..... .+ . .++++ +++.||.+. .|+++.+++
T Consensus 168 ~~a~~~~~~se~~~~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l~~~~~vlv~~~r~~~~~~~l~~ll~ 246 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLAE-GKDPATIFVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRENLGEPMQGMFE 246 (403)
T ss_dssp HHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSCTTCEEEEECCCCHHHHTTHHHHHHH
T ss_pred HhcCEEECCCHHHHHHHHHc-CCCcccEEEeCCchHHHHHhhhhhhcchHHHHhccCCCEEEEEeCcccccCcHHHHHHH
Confidence 34899999999999999885 65 45677777765 2111110000 00 0 11344 457888754 467899999
Q ss_pred HHHHhhh
Q 022349 290 TRYYSYL 296 (298)
Q Consensus 290 ~Afa~~~ 296 (298)
|+.++.
T Consensus 247 -a~~~l~ 252 (403)
T 3ot5_A 247 -AVREIV 252 (403)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 988764
No 31
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=94.00 E-value=0.42 Score=43.79 Aligned_cols=42 Identities=12% Similarity=0.023 Sum_probs=28.3
Q ss_pred hccCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 29 ARRNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 29 ~~~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
-....+|||+|+-.. ++|-..-+..++++|++. +++|.++|+
T Consensus 10 ~~~~~~MrIl~~~~~---~~gh~~~~~~La~~L~~~--GheV~v~~~ 51 (398)
T 4fzr_A 10 VPRGSHMRILVIAGC---SEGFVMPLVPLSWALRAA--GHEVLVAAS 51 (398)
T ss_dssp -----CCEEEEECCS---SHHHHGGGHHHHHHHHHT--TCEEEEEEE
T ss_pred CCCCCceEEEEEcCC---CcchHHHHHHHHHHHHHC--CCEEEEEcC
Confidence 345667999998643 456666677899999987 577777775
No 32
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=93.32 E-value=1.9 Score=38.95 Aligned_cols=37 Identities=8% Similarity=0.050 Sum_probs=27.8
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
|||.|+ +. .++|-..-+..++++|++. +++|.+.|+.
T Consensus 1 MrIl~~-~~--~~~Gh~~p~~~la~~L~~~--Gh~V~~~~~~ 37 (384)
T 2p6p_A 1 MRILFV-AA--GSPATVFALAPLATAARNA--GHQVVMAANQ 37 (384)
T ss_dssp CEEEEE-CC--SSHHHHHHHHHHHHHHHHT--TCEEEEEECG
T ss_pred CEEEEE-eC--CccchHhHHHHHHHHHHHC--CCEEEEEeCH
Confidence 578887 32 3578888888999999986 6777777643
No 33
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=89.63 E-value=1.6 Score=39.55 Aligned_cols=37 Identities=8% Similarity=-0.100 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 34 TTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 34 ~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
+|||+|+-.- ++|-..-+..++++|++. +++|.++++
T Consensus 1 ~MrIl~~~~~---~~gh~~~~~~la~~L~~~--GheV~v~~~ 37 (391)
T 3tsa_A 1 HMRVLVVPLP---YPTHLMAMVPLCWALQAS--GHEVLIAAP 37 (391)
T ss_dssp CCEEEEECCS---CHHHHHTTHHHHHHHHHT--TCEEEEEEC
T ss_pred CcEEEEEcCC---CcchhhhHHHHHHHHHHC--CCEEEEecC
Confidence 4899988643 567777788899999987 567777663
No 34
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=89.38 E-value=12 Score=33.61 Aligned_cols=36 Identities=14% Similarity=0.072 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
+||.|+-.. +.|--.-+..++++|++. +++|.++|+
T Consensus 5 ~~il~~~~~---~~Ghv~~~~~La~~L~~~--GheV~v~~~ 40 (402)
T 3ia7_A 5 RHILFANVQ---GHGHVYPSLGLVSELARR--GHRITYVTT 40 (402)
T ss_dssp CEEEEECCS---SHHHHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CEEEEEeCC---CCcccccHHHHHHHHHhC--CCEEEEEcC
Confidence 488887542 345556667899999987 678777774
No 35
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=86.20 E-value=19 Score=32.52 Aligned_cols=40 Identities=8% Similarity=-0.038 Sum_probs=27.4
Q ss_pred cCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 31 ~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
..+++||.|+-.. ++|=-.-++.++++|++. +++|.++|+
T Consensus 17 ~~~m~rIl~~~~~---~~GHv~p~l~La~~L~~~--Gh~V~v~~~ 56 (415)
T 3rsc_A 17 GRHMAHLLIVNVA---SHGLILPTLTVVTELVRR--GHRVSYVTA 56 (415)
T ss_dssp --CCCEEEEECCS---CHHHHGGGHHHHHHHHHT--TCEEEEEEC
T ss_pred cccCCEEEEEeCC---CccccccHHHHHHHHHHC--CCEEEEEeC
Confidence 3456799887632 355556667899999887 678777774
No 36
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=85.23 E-value=0.69 Score=37.68 Aligned_cols=27 Identities=11% Similarity=0.000 Sum_probs=24.6
Q ss_pred CcEEEEEcCCC-CccChHHHHHHHHHhhh
Q 022349 269 YPAIISVAQFR-PEKVRYKLISTRYYSYL 296 (298)
Q Consensus 269 ~~~iLsvgRl~-p~Kn~~l~I~~Afa~~~ 296 (298)
++.++++||+. ++|+++.+++ |++.+.
T Consensus 36 ~~~i~~~G~~~~~~K~~~~li~-a~~~l~ 63 (200)
T 2bfw_A 36 GVTFMFIGRFDRGQKGVDVLLK-AIEILS 63 (200)
T ss_dssp CEEEEEESCBCSSSSCHHHHHH-HHHHHT
T ss_pred CCEEEEeeccccccCCHHHHHH-HHHHHH
Confidence 46899999999 9999999999 999874
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=83.96 E-value=5.9 Score=36.61 Aligned_cols=74 Identities=8% Similarity=0.039 Sum_probs=45.9
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCC-CCCceEEcCCC-CCCccc-----c--c--CCCCCCCCcE-EEEEcCCC---CccCh
Q 022349 220 SCADLAMVNSSWTQSHIEKLWGI-PDRIKRVYPPC-DTSGLQ-----V--L--PLERSTEYPA-IISVAQFR---PEKVR 284 (298)
Q Consensus 220 ~~ad~viaNS~~Ta~~i~~~~g~-~~~~~VIYPPv-d~~~~~-----~--~--~~~~~~~~~~-iLsvgRl~---p~Kn~ 284 (298)
+.+|.+++.|+..++.+.+. |+ +.++.|+-+|+ |..... . . .+.-+. +++ +++.+|-+ +.|++
T Consensus 145 ~~a~~~~~~te~~~~~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l 222 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTP-KQYFLISSHREENVDVKNNL 222 (385)
T ss_dssp HHCSEEEESSHHHHHHHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHH
T ss_pred hhhceeecCCHHHHHHHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHH
Confidence 34899999999999999875 65 34577777775 211110 0 0 011011 345 44777754 55889
Q ss_pred HHHHHHHHHhhh
Q 022349 285 YKLISTRYYSYL 296 (298)
Q Consensus 285 ~l~I~~Afa~~~ 296 (298)
+.+++ |++++.
T Consensus 223 ~~ll~-al~~l~ 233 (385)
T 4hwg_A 223 KELLN-SLQMLI 233 (385)
T ss_dssp HHHHH-HHHHHH
T ss_pred HHHHH-HHHHHH
Confidence 99999 988764
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=79.38 E-value=9.5 Score=34.54 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=29.8
Q ss_pred cCCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEcc
Q 022349 31 RNRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTG 75 (298)
Q Consensus 31 ~~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~ 75 (298)
..++|||+|+-.. ++|-..-+..++++|.+. +++|.++|+
T Consensus 17 ~~~~MrIl~~~~~---~~Ghv~~~~~La~~L~~~--GheV~v~~~ 56 (398)
T 3oti_A 17 EGRHMRVLFVSSP---GIGHLFPLIQLAWGFRTA--GHDVLIAVA 56 (398)
T ss_dssp --CCCEEEEECCS---SHHHHGGGHHHHHHHHHT--TCEEEEEES
T ss_pred hhhcCEEEEEcCC---CcchHhHHHHHHHHHHHC--CCEEEEecc
Confidence 4556899999653 466666778999999986 678888886
No 39
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=78.25 E-value=4.8 Score=36.68 Aligned_cols=63 Identities=14% Similarity=0.001 Sum_probs=40.2
Q ss_pred HHHHhccCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCC-CCCcccccCCCCCCCCcEEEEEcCCCC
Q 022349 214 MYGLVGSCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPC-DTSGLQVLPLERSTEYPAIISVAQFRP 280 (298)
Q Consensus 214 ~~~~~~~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPv-d~~~~~~~~~~~~~~~~~iLsvgRl~p 280 (298)
.+++..++||.|++.|+..++.+.+. |++ ...+++.+. |.. ...+......+..++++||+..
T Consensus 126 ~E~~~y~~aD~Ii~~S~~~~~~l~~~-G~~-~~ki~~~~~~~~~--~~~~~~~~~~~~~i~yaG~l~k 189 (339)
T 3rhz_A 126 RTIAYYNKADVVVAPSQKMIDKLRDF-GMN-VSKTVVQGMWDHP--TQAPMFPAGLKREIHFPGNPER 189 (339)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHHT-TCC-CSEEEECCSCCCC--CCCCCCCCEEEEEEEECSCTTT
T ss_pred HHHHHHHHCCEEEECCHHHHHHHHHc-CCC-cCceeecCCCCcc--CcccccccCCCcEEEEeCCcch
Confidence 36788999999999999999999885 642 133444433 211 1111111111468999999984
No 40
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=54.96 E-value=1e+02 Score=27.74 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 33 RTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 33 ~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
.++||.|+ +.- +.|=-.-.+.++++|++. +++|.+.|+.
T Consensus 11 ~~~~Il~~-~~~--~~GHv~p~l~la~~L~~~--Gh~V~~~~~~ 49 (424)
T 2iya_A 11 TPRHISFF-NIP--GHGHVNPSLGIVQELVAR--GHRVSYAITD 49 (424)
T ss_dssp CCCEEEEE-CCS--CHHHHHHHHHHHHHHHHT--TCEEEEEECG
T ss_pred ccceEEEE-eCC--CCcccchHHHHHHHHHHC--CCeEEEEeCH
Confidence 45789987 333 357777778999999987 6787777754
No 41
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=50.26 E-value=77 Score=27.56 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=29.7
Q ss_pred cEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 35 TSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 35 ~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
+||.++.+.- =|=.-...-++++|.+.+|++++.+.+..
T Consensus 1 ~~ILii~~~~---iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 1 MRVLIVKTSS---MGDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp CEEEEECCCC---HHHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred CeEEEEeccc---cchHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 4788886653 25555777899999999999998887754
No 42
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=42.12 E-value=46 Score=21.99 Aligned_cols=15 Identities=20% Similarity=0.682 Sum_probs=7.1
Q ss_pred CchhHHHHHHHHHHH
Q 022349 3 PYGILIWAVITAVLA 17 (298)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (298)
|.++-+|+.++|+++
T Consensus 4 ~~~vp~WiIi~svl~ 18 (54)
T 2l8s_A 4 PGRVPLWVILLSAFA 18 (54)
T ss_dssp CCCCCTHHHHHHHHH
T ss_pred CccCchHHHHHHHHH
Confidence 334444555555444
No 43
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=41.66 E-value=1.7e+02 Score=25.29 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=28.1
Q ss_pred cCCcEEEEcCHHHHHHHHHHhCCCCCceEEcCCCCCCccc
Q 022349 220 SCADLAMVNSSWTQSHIEKLWGIPDRIKRVYPPCDTSGLQ 259 (298)
Q Consensus 220 ~~ad~viaNS~~Ta~~i~~~~g~~~~~~VIYPPvd~~~~~ 259 (298)
+.+|.+|+|++.+. ++...+| ....++|.|-+.....
T Consensus 260 ~~a~l~I~~Dsg~~-HlAaa~g--~P~v~lfg~t~~~~~~ 296 (348)
T 1psw_A 260 AACKAIVTNDSGLM-HVAAALN--RPLVALYGPSSPDFTP 296 (348)
T ss_dssp HTSSEEEEESSHHH-HHHHHTT--CCEEEEESSSCTTSSC
T ss_pred HhCCEEEecCCHHH-HHHHHcC--CCEEEEECCCCccccC
Confidence 36999999988884 5577787 6778899887765543
No 44
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=40.20 E-value=1.7e+02 Score=25.95 Aligned_cols=42 Identities=5% Similarity=-0.039 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 32 ~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
-..+||.++...- . |=--...-++++|.+.+|++++.+.+..
T Consensus 6 l~~~~iLvi~~~~--l-GD~i~~~P~l~~L~~~~P~a~I~~l~~~ 47 (349)
T 3tov_A 6 LDYKRIVVTFLMH--L-GDVILTTPFLEVLRKAAPHSHITYVIDE 47 (349)
T ss_dssp CTTCEEEEECCCC--H-HHHHTTHHHHHHHHHHCTTSEEEEEEEG
T ss_pred CCCCEEEEEecCc--c-cHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 3557899998743 2 3333444578999999999998887743
No 45
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.80 E-value=53 Score=21.69 Aligned_cols=12 Identities=50% Similarity=0.858 Sum_probs=5.6
Q ss_pred hHHHHHHHHHHH
Q 022349 6 ILIWAVITAVLA 17 (298)
Q Consensus 6 ~~~~~~~~~~~~ 17 (298)
+-.|+.++++++
T Consensus 10 vp~wiIi~svl~ 21 (54)
T 2knc_A 10 IPIWWVLVGVLG 21 (54)
T ss_dssp CCHHHHHHHHHH
T ss_pred cchHHHHHHHHH
Confidence 344555444444
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=28.31 E-value=2.1e+02 Score=28.53 Aligned_cols=38 Identities=13% Similarity=0.166 Sum_probs=24.3
Q ss_pred HHhccCCcEEEeCCCcccc--cccccccCCeE-EEEeecCC
Q 022349 135 ALCKFTPLYYFDTSGYAFT--YPLARIFGCRV-ICYTHYPT 172 (298)
Q Consensus 135 ~l~~~~pDv~i~s~~~~~~--~p~~~~~~~~~-i~Y~H~P~ 172 (298)
.++..+.||.||-.|+... .++.....+|+ |.|..||.
T Consensus 309 ~i~~d~iDIlidl~g~t~~~r~~i~a~r~APvQv~~lG~p~ 349 (723)
T 4gyw_A 309 RIHQDGIHILVNMNGYTKGARNELFALRPAPIQAMWLGYPG 349 (723)
T ss_dssp HHHHTTCSEEEESCSSBTTCCTHHHHTCCSSEEEECSSCSS
T ss_pred HHHhccceeEEeccCCCCCCcchhhhcCCCCceeeeccCCC
Confidence 3567889999999886422 12221224566 78888875
No 47
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=27.79 E-value=73 Score=20.44 Aligned_cols=11 Identities=18% Similarity=0.018 Sum_probs=9.6
Q ss_pred hccCCcEEEEc
Q 022349 218 VGSCADLAMVN 228 (298)
Q Consensus 218 ~~~~ad~viaN 228 (298)
..+.||.||+|
T Consensus 38 ~Vp~AdvVitN 48 (48)
T 3c01_A 38 DIENSRLIVAN 48 (48)
T ss_pred cCCCCCEeecC
Confidence 46799999998
No 48
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=23.85 E-value=93 Score=20.48 Aligned_cols=11 Identities=9% Similarity=-0.106 Sum_probs=9.6
Q ss_pred hccCCcEEEEc
Q 022349 218 VGSCADLAMVN 228 (298)
Q Consensus 218 ~~~~ad~viaN 228 (298)
..+.||.||+|
T Consensus 44 ~Vp~AdvVItN 54 (54)
T 3bzy_A 44 NIKKSTVIVKN 54 (54)
T ss_pred cCCCCCEEecC
Confidence 46799999998
No 49
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=23.58 E-value=3.4e+02 Score=24.11 Aligned_cols=25 Identities=12% Similarity=0.102 Sum_probs=21.3
Q ss_pred CcEEEEEcCCC-CccChHHHHHHHHHh
Q 022349 269 YPAIISVAQFR-PEKVRYKLISTRYYS 294 (298)
Q Consensus 269 ~~~iLsvgRl~-p~Kn~~l~I~~Afa~ 294 (298)
...+++.|+.. +.+.++.+++ |+++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~-al~~ 247 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIE-AVRA 247 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHH-HHHH
T ss_pred CeEEEECCCCCCcHHHHHHHHH-HHHh
Confidence 46788999998 8888999999 8875
No 50
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=23.38 E-value=1.2e+02 Score=18.82 Aligned_cols=11 Identities=45% Similarity=0.815 Sum_probs=5.0
Q ss_pred HHHHHHHHHHH
Q 022349 7 LIWAVITAVLA 17 (298)
Q Consensus 7 ~~~~~~~~~~~ 17 (298)
-.|+.++|.++
T Consensus 9 p~wiIi~s~l~ 19 (42)
T 2k1a_A 9 PIWWVLVGVLG 19 (42)
T ss_dssp CHHHHHHHHHH
T ss_pred chHHHHHHHHH
Confidence 34444444444
No 51
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=23.06 E-value=3.7e+02 Score=23.34 Aligned_cols=40 Identities=13% Similarity=0.030 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEccC
Q 022349 32 NRTTSVAFFHPNTNDGGGGERVLWCAVKAIQEESPDLDCIVYTGD 76 (298)
Q Consensus 32 ~~~~~Va~~Hp~l~~~GGaErV~~~l~~aL~~~~~~~~v~iyT~~ 76 (298)
.+.|||.|+ +.- +.|==.-++.++++|.+. |++|.+.|+.
T Consensus 20 ~~~MRIL~~-~~p--~~GHv~P~l~LA~~L~~r--Gh~Vt~~t~~ 59 (400)
T 4amg_A 20 FQSMRALFI-TSP--GLSHILPTVPLAQALRAL--GHEVRYATGG 59 (400)
T ss_dssp -CCCEEEEE-CCS--SHHHHGGGHHHHHHHHHT--TCEEEEEECS
T ss_pred CCCCeEEEE-CCC--chhHHHHHHHHHHHHHHC--CCEEEEEeCc
Confidence 456899987 322 233334466899999987 6777777753
No 52
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=22.57 E-value=96 Score=19.47 Aligned_cols=11 Identities=9% Similarity=-0.088 Sum_probs=5.3
Q ss_pred HHhhhccCCCc
Q 022349 25 HVHNARRNRTT 35 (298)
Q Consensus 25 ~~~~~~~~~~~ 35 (298)
.|.|.|.++++
T Consensus 33 ~~~RRr~~~~k 43 (44)
T 2ks1_B 33 LFMRRRHIVRK 43 (44)
T ss_dssp HHHHTTTCCSC
T ss_pred HHhhhhHhhcc
Confidence 44555555443
Done!