BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022351
(298 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R2R6|MTG1_MOUSE Mitochondrial GTPase 1 OS=Mus musculus GN=Mtg1 PE=2 SV=2
Length = 326
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNK 83
W+ HMA + + + VD ++EV DARIPFS F +L P +LVLNK
Sbjct: 29 WFPGHMAKGLKKMQSSLKSVDCVIEVHDARIPFSGRNPLFQELLGLKP-----HLLVLNK 83
Query: 84 MDLASPTQFKEWITFFDQQNCPSFGVNSHNKD-NVKEFLKFLQAHVRNLRKSDYDASSDT 142
MDLA T+ ++ + +++ + + KD N+K+ + + +R + + A +
Sbjct: 84 MDLADLTEQQKIVQRLEEKGLSNVLFTNCVKDENIKQIVPKVMELIRCSYRY-HRAETPE 142
Query: 143 VTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYS-LKIASHPN 201
+M++G+PNVGKS+L NSL R GK A V +PG T+ + S +++ P
Sbjct: 143 YCIMVVGVPNVGKSSLINSL----RRQHLRTGK--AARVGGEPGITRAVTSRIQVCERPL 196
Query: 202 IYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILN 249
+++LDTPG+L P I VE KLAL G + D VG + +A Y L LN
Sbjct: 197 VFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLN 244
>sp|B7GGD6|RBGA_ANOFW Ribosome biogenesis GTPase A OS=Anoxybacillus flavithermus (strain
DSM 21510 / WK1) GN=rbgA PE=3 SV=1
Length = 284
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 120/234 (51%), Gaps = 36/234 (15%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNK 83
W+ HMA A R + +++ L+DI+ E+ DARIP SS D++ + P RI++LNK
Sbjct: 8 WFPGHMAKAKREVTEKLKLIDIVFELVDARIPMSSRNPLIDEIVANKP-----RIILLNK 62
Query: 84 MDLASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFL---------KFLQAHVRNLRKS 134
D+A P K+W+ FF Q + ++S + VK+ + KF + + +++
Sbjct: 63 ADMADPDVTKQWVDFFAAQQIDAIAIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRP 122
Query: 135 DYDASSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSL 194
+ +++GIPNVGKS L N L GK A PG TK +
Sbjct: 123 R------AMRALIVGIPNVGKSTLINRLA----------GK-HIAKTGDTPGVTKAQQWI 165
Query: 195 KIASHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGIL 248
K+ + +LDTPGIL P+ D EV KLA TGAI D+ + +++A Y L L
Sbjct: 166 KVGKE--LELLDTPGILWPKFEDEEVGYKLATTGAIKDTILNLQDVAVYALRFL 217
>sp|A9JTX2|MTG1_XENTR Mitochondrial GTPase 1 OS=Xenopus tropicalis GN=mtg1 PE=2 SV=1
Length = 311
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 126/240 (52%), Gaps = 11/240 (4%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
W+ HMA + + ++ +D I+EV DARIP S ++ +L+LNKMDL
Sbjct: 21 WFPGHMAKGLKQMKTKLKNLDCIVEVHDARIPLSGRNPIFQD--SLGMKPHLLILNKMDL 78
Query: 87 ASPTQFKEWITFFDQQNCPSFGVNSHNKD-NVKEFLKFLQAHVRNLRKSDYDASSDTVTV 145
A TQ K + QQ + KD N+K + + V ++ + +++T +
Sbjct: 79 ADLTQKKRILAQLKQQGVGNVIFTDCVKDQNIKHVVPVISELVGCSQRFHREENTET-CI 137
Query: 146 MLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYS-LKIASHPNIYV 204
M++G+PNVGKS+L N+L ++ KGK + V +PG T+ + + ++++ P I++
Sbjct: 138 MVIGVPNVGKSSLINALRRM----HLRKGK--ASRVGAEPGITRSVLTKIQVSESPLIFL 191
Query: 205 LDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSINQ 264
DTPG+L P I VE KLAL G I D VG +A Y L ILN +++ + + +
Sbjct: 192 FDTPGVLSPRIESVETGMKLALCGTILDHLVGEDIMADYLLYILNQQMQHRYVEHYGLEK 251
>sp|A8FD69|RBGA_BACP2 Ribosome biogenesis GTPase A OS=Bacillus pumilus (strain SAFR-032)
GN=rbgA PE=3 SV=1
Length = 282
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 33/241 (13%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNK 83
W+ HMA A R + +++ L+DI+ E+ DARIP SS +++ + P +I++LNK
Sbjct: 5 WFPGHMAKARREVTEKLKLIDIVFELTDARIPMSSRNPMIEEILQNKP-----KIMLLNK 59
Query: 84 MDLASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYD------ 137
D A P KEW F+QQ S +NS + + + + + + K +D
Sbjct: 60 ADKADPRVTKEWQAHFEQQGVRSLAINSVDGQGLNQII----TTSKEILKEKFDRMKAKG 115
Query: 138 ASSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIA 197
+ +++GIPNVGKS L N L K A +PG T +K+
Sbjct: 116 VKPRAIRALIIGIPNVGKSTLINRL-----------AKKNIAKTGDRPGITTSQQWVKVG 164
Query: 198 SHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGIL--NFSDEYK 255
+ +LDTPGIL P+ D +V +LA+TGAI DS + +++A Y L L N+ + K
Sbjct: 165 KE--MELLDTPGILWPKFEDEKVGLRLAVTGAIKDSIINLQDVAVYGLRFLEENYPERLK 222
Query: 256 K 256
K
Sbjct: 223 K 223
>sp|C5D8U8|RBGA_GEOSW Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70)
GN=rbgA PE=3 SV=1
Length = 283
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 30/248 (12%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
W+ HMA A R + +++ L+DI+ E+ DARIP SS + H + RI++LNK D+
Sbjct: 7 WFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMI--HEILGNKPRIVLLNKADM 64
Query: 87 ASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFL---------KFLQAHVRNLRKSDYD 137
A T ++WI +F++Q + +++ +++ + KF + + ++
Sbjct: 65 ADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIK----- 119
Query: 138 ASSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIA 197
+ + +++GIPNVGKS L N L GR A +PG TK +K+
Sbjct: 120 -NPRPMRALIVGIPNVGKSTLINRLA--GR---------NIAKTGDKPGVTKAQQWIKVG 167
Query: 198 SHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSDEYKKW 257
+ +LDTPGIL P+ D EV KLA TGAI D+ + +++A Y L L +
Sbjct: 168 KE--MELLDTPGILWPKFEDEEVGLKLATTGAIKDTILNLQDVAVYALNFLKQHYPERLK 225
Query: 258 AKFSINQI 265
++S++ I
Sbjct: 226 ERYSLDDI 233
>sp|Q9BT17|MTG1_HUMAN Mitochondrial GTPase 1 OS=Homo sapiens GN=MTG1 PE=1 SV=2
Length = 334
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 121/232 (52%), Gaps = 25/232 (10%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNK 83
W+ HMA + + + LVD I+EV DARIP S F + P +LVLNK
Sbjct: 30 WFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKP-----HLLVLNK 84
Query: 84 MDLASPTQFKEWITFFDQQNCPSFGVNSHNKD-NVKEFLKFLQAHV----RNLRKSDYDA 138
MDLA T+ ++ + + + + + KD NVK+ + + + R RK + +
Sbjct: 85 MDLADLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENLE- 143
Query: 139 SSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYS-LKIA 197
+M++G+PNVGKS+L NSL R KGK V +PG T+ + S ++++
Sbjct: 144 ----YCIMVIGVPNVGKSSLINSL----RRQHLRKGK--ATRVGGEPGITRAVMSKIQVS 193
Query: 198 SHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILN 249
P +++LDTPG+L P I VE KLAL G + D VG + +A Y L LN
Sbjct: 194 ERPLMFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLN 245
>sp|Q819W8|RBGA_BACCR Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=rbgA PE=3 SV=1
Length = 296
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 31/248 (12%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNK 83
W+ HMA A R + +++ L+D+++E+ DAR+P SS D++ H P R++VLNK
Sbjct: 5 WFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKP-----RLVVLNK 59
Query: 84 MDLASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDA----- 138
D+A K+WI +F ++ + +N+ +KE + A + L K +D
Sbjct: 60 ADMADDRLTKQWIAYFKEKGHMAISINAQAGQGMKE----IAAACKVLVKEKFDKMVAKG 115
Query: 139 -SSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIA 197
+ +++GIPNVGKS L N L K A +PG T +K+
Sbjct: 116 IRPRAIRALIVGIPNVGKSTLINKL-----------AKKNIAKTGDRPGVTTAQQWIKVG 164
Query: 198 SHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSDEYKKW 257
+ +LDTPGIL P+ D V +LA TGAI DS + +++A Y L + +
Sbjct: 165 KE--MELLDTPGILWPKFEDQLVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLK 222
Query: 258 AKFSINQI 265
++++N+I
Sbjct: 223 ERYNLNEI 230
>sp|D5DJL5|RBGA_BACMD Ribosome biogenesis GTPase A OS=Bacillus megaterium (strain DSM
319) GN=rbgA PE=3 SV=1
Length = 288
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 133/248 (53%), Gaps = 30/248 (12%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNK 83
W+ HMA A R + +++ L+DI+ E+ DARIP SS D++ + P RI++LNK
Sbjct: 5 WFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKP-----RIVLLNK 59
Query: 84 MDLASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFL----KFLQAHVRNLRKSDYDAS 139
+D A P ++W+ ++ +Q + +++ +K+ + + LQ +R
Sbjct: 60 VDKADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKP 119
Query: 140 SDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASH 199
+ M++GIPNVGKS L N L A++K A +PG T+ +K+ +
Sbjct: 120 R-AIRAMIVGIPNVGKSTLINRL-------ASKK----IAKTGDRPGVTQAQQWIKVGNE 167
Query: 200 PNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILN--FSDEYKKW 257
+ +LDTPGIL P+ D V KLA TGAI D+ + +++A Y L L + ++ K+
Sbjct: 168 --LELLDTPGILWPKFEDETVGYKLATTGAIKDTILNMQDVAVYALRFLTSHYPEQLKQ- 224
Query: 258 AKFSINQI 265
++++N+I
Sbjct: 225 -RYNLNEI 231
>sp|Q65JP4|RBGA_BACLD Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=rbgA PE=3 SV=1
Length = 283
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 29/247 (11%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
W+ HMA A R + +++ L+DI+ E+ DARIP SS + + + RI++LNK D
Sbjct: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDI--LKNKPRIMLLNKADK 62
Query: 87 ASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYD------ASS 140
A + K W F++ P+ +NS N + + L + L K +D
Sbjct: 63 ADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQIL----PASKELLKEKFDKMKAKGVKP 118
Query: 141 DTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHP 200
+ +++GIPNVGKS L N L K A +PG T +K+
Sbjct: 119 RAIRALIVGIPNVGKSTLINRL-----------AKKNIAKTGDRPGVTTAQQWVKVGKE- 166
Query: 201 NIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGIL--NFSDEYKKWA 258
+ +LDTPGIL P+ D V +LA TGAI DS + +++A Y L L N+ + KK
Sbjct: 167 -LELLDTPGILWPKFEDELVGLRLAATGAIKDSIINLQDVAVYGLRFLEENYPERLKK-- 223
Query: 259 KFSINQI 265
++ + +I
Sbjct: 224 RYDLEEI 230
>sp|Q4PS77|MTG1_BOVIN Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2
Length = 332
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 116/231 (50%), Gaps = 23/231 (9%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQLRNHHPFSSSRRILVLNK 83
W+ HMA + + + LVD I+EV DA+IP S F + P +LVLNK
Sbjct: 30 WFPGHMAKGLKKMQSSLRLVDCIIEVHDAQIPLSGRNPLFQETLGLKPH-----LLVLNK 84
Query: 84 MDLASPTQFKEWITFFDQQNCPSFGVNSHNKD-NVKEFLKFLQAHVRNLRKSDYD---AS 139
MDLA + ++ I +++ + KD NVK+ + V L S Y
Sbjct: 85 MDLADLKEQQKIIQHLEREGIKHVVFTNCVKDENVKQVI----PTVTELVGSSYRYHRGE 140
Query: 140 SDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYS-LKIAS 198
+M++G+PNVGKS+L NSL R KGK V +PG T+ + S +++
Sbjct: 141 HVEYCIMVIGVPNVGKSSLINSL----RRQHLRKGK--ATRVGGEPGITRAVMSRIQVCE 194
Query: 199 HPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILN 249
P +++LDTPG+L P I VE KLAL G + D VG + LA + L LN
Sbjct: 195 RPLMFLLDTPGVLAPRIPSVETGLKLALCGTVLDHLVGEETLADFLLYTLN 245
>sp|E3TDS3|MTG1_ICTPU Mitochondrial GTPase 1 OS=Ictalurus punctatus GN=mtg1 PE=2 SV=1
Length = 320
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 136/266 (51%), Gaps = 23/266 (8%)
Query: 4 SSSSLFKLAREIGTAVSQKKGGGWYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSE- 62
++SS F+ + G +++ W+ HMA + + VD ++E+ DARIPFS
Sbjct: 9 NASSKFRTVFDFG----ERQVAHWFPGHMAKGLKQMRASPRKVDCVIEIHDARIPFSGRN 64
Query: 63 --FDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPSFGVNSHNKD---NV 117
F + + P +L+LNKMDLA + + ++ + + K +V
Sbjct: 65 PLFQENLDVRP-----HLLILNKMDLADTSDKMSILKQLERDGVKNVLLTDCLKQRDTSV 119
Query: 118 KEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLR 177
K+ + + + N + + + + +M++G+PNVGKS+L N++ R T +KGK
Sbjct: 120 KKIIPLVTDLIENAPRF-HREENRSYCLMVIGVPNVGKSSLINAI----RRTNLKKGK-- 172
Query: 178 HATVSPQPGETKDIYS-LKIASHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVG 236
+ V +PG TK + + +++ P I++LDTPG+LPP+I ++E KLAL G I D VG
Sbjct: 173 ASRVGGEPGITKAVLTKIQVCERPVIHLLDTPGVLPPKIENIETGMKLALCGTILDHLVG 232
Query: 237 GKELAQYFLGILNFSDEYKKWAKFSI 262
+A Y L LN + ++ +
Sbjct: 233 EDIIADYLLFSLNRPQRFGYVERYDL 258
>sp|E0TTS5|RBGA_BACPZ Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=rbgA PE=3
SV=1
Length = 282
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 21/243 (8%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
W+ HMA A R + +++ L+DI+ E+ DARIP SS + + + RI++LNK D
Sbjct: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDI--LKNKPRIMLLNKADK 62
Query: 87 ASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFL----KFLQAHVRNLRKSDYDASSDT 142
A ++W F+ Q S +NS N + + + + LQ +R +
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA-- 120
Query: 143 VTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNI 202
+ +++GIPNVGKS L N L K A +PG T +K+ +
Sbjct: 121 IRALIIGIPNVGKSTLINRL-----------AKKNIAKTGDRPGITTSQQWVKVGKE--L 167
Query: 203 YVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFSI 262
+LDTPGIL P+ D V +LA+TGAI DS + +++A + L L + ++++
Sbjct: 168 ELLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYAL 227
Query: 263 NQI 265
++I
Sbjct: 228 DEI 230
>sp|O31743|RBGA_BACSU Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168)
GN=rbgA PE=1 SV=1
Length = 282
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
W+ HMA A R + +++ L+DI+ E+ DARIP SS + + + RI++LNK D
Sbjct: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDI--LKNKPRIMLLNKADK 62
Query: 87 ASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFL----KFLQAHVRNLRKSDYDASSDT 142
A ++W F+ Q S +NS N + + + + LQ +R +
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA-- 120
Query: 143 VTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNI 202
+ +++GIPNVGKS L N L K A +PG T +K+ +
Sbjct: 121 IRALIIGIPNVGKSTLINRL-----------AKKNIAKTGDRPGITTSQQWVKVGKE--L 167
Query: 203 YVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGIL 248
+LDTPGIL P+ D V +LA+TGAI DS + +++A + L L
Sbjct: 168 ELLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>sp|Q29AU5|MTG1_DROPS Mitochondrial GTPase 1 OS=Drosophila pseudoobscura pseudoobscura
GN=GA14342 PE=3 SV=2
Length = 320
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 115/245 (46%), Gaps = 16/245 (6%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSR-RILVLNKMD 85
W+ HM R I ++ VD I+E+ D+RIP + Q + S + ILVLNK+D
Sbjct: 22 WFPGHMNKGMRQIQQKLRNVDCIVEIHDSRIPLAGRNSQFFDTITGSGVKPHILVLNKVD 81
Query: 86 LASPTQFKEWITFFDQQ-----NCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYD-AS 139
L P Q + + +Q N V + L V + S Y+ A
Sbjct: 82 LLGPKQQRSVLQQLRRQQPELKNILFTNCKDQRNHGVLDILPLATQLVGD--SSRYNRAQ 139
Query: 140 SDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDI-YSLKIAS 198
S +M++G+PNVGKS++ N L + K A V + G T+ + +KI
Sbjct: 140 SAEHNIMIIGVPNVGKSSIINVLRNV------HLKKRSAARVGAEAGVTRAVGERIKIQE 193
Query: 199 HPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSDEYKKWA 258
P +Y++DTPGIL P + D E+ KLAL G + D VG +A Y L LN Y+
Sbjct: 194 KPAVYMIDTPGILQPSVTDDEMGMKLALVGCLPDHIVGEDLIADYLLYWLNKHRRYEYVE 253
Query: 259 KFSIN 263
K S++
Sbjct: 254 KLSLS 258
>sp|Q9VCU5|MTG1_DROME Mitochondrial GTPase 1 OS=Drosophila melanogaster GN=CG17141 PE=1
SV=2
Length = 323
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 112/240 (46%), Gaps = 24/240 (10%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSR-RILVLNKMD 85
W+ HM R I ++ VD I+E+ DARIP + Q + S + ILVLNK+D
Sbjct: 22 WFPGHMTKGMRQIQQKLRNVDCIVEIHDARIPLAGRNSQFFDTITGSGVKPHILVLNKVD 81
Query: 86 LASPTQFKEWITFFDQQ----------NCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSD 135
L Q K + +Q NC + V + L V + +
Sbjct: 82 LLGAKQQKSVLQQLRRQQPELQHILFTNC-----KDQRNNGVLDILPLATRLVSESSRFN 136
Query: 136 YDASSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDI-YSL 194
+++ +M++G+PNVGKS++ N L + K A V + G T+ + +
Sbjct: 137 RTQAAEH-NLMIIGVPNVGKSSVINVLRNV------HLKKKSAARVGAEAGITRSVGERI 189
Query: 195 KIASHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSDEY 254
KI +P +Y++DTPGIL P I D E+ KLAL G + D VG +A Y L LN +Y
Sbjct: 190 KIQENPPVYMIDTPGILQPSIKDDEMGMKLALVGCLPDHIVGEDLIADYLLYWLNSHRKY 249
>sp|Q9WZM6|RBGA_THEMA Ribosome biogenesis GTPase A OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=rbgA PE=1 SV=1
Length = 262
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 32/204 (15%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
WY H+ A R I D + LV+ ++EVRDAR PF++ + FS I++LNK+D+
Sbjct: 3 WYPGHIEKAKRQIKDLLRLVNTVVEVRDARAPFATSAYGV----DFSRKETIILLNKVDI 58
Query: 87 ASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVM 146
A K+W+ FF +Q + +H + K LK K +D + V+
Sbjct: 59 ADEKTTKKWVEFFKKQGKRV--ITTHKGEPRKVLLK----------KLSFDRLA---RVL 103
Query: 147 LLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLD 206
++G+PN GKS + N L KGK R ++V QPG TK I + + + +LD
Sbjct: 104 IVGVPNTGKSTIINKL----------KGK-RASSVGAQPGITKGIQWFSLEN--GVKILD 150
Query: 207 TPGILPPEIHDVEVCSKLALTGAI 230
TPGIL I ++ +KL L G++
Sbjct: 151 TPGILYKNIFSEDLAAKLLLVGSL 174
>sp|B6JW87|MTG1_SCHJY Mitochondrial GTPase 1 OS=Schizosaccharomyces japonicus (strain
yFS275 / FY16936) GN=mtg1 PE=3 SV=1
Length = 328
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
W+ HM + + D + D+I+EVRDARIP SS L ++ +R++V NK DL
Sbjct: 4 WFPGHMKTTLKRLRDSVSKNDVIVEVRDARIPLSSRNPALETLA--ANRKRVVVYNKCDL 61
Query: 87 ASP-------TQFKEWITFFDQQNCPSFG----VNSHNK-----DNVKEFLKFLQAHVRN 130
A P T+ + F++ + + + + NV E +K L ++
Sbjct: 62 AFPSAGDLCKTRALNSVRAFEETYVETLARWETIQTLRRYVGTVSNVPECIKRLLQLLQK 121
Query: 131 LRKSDYDASSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKD 190
L SD+ AS+ TV V ++G+PNVGKS++ N+L A + + A V PG T++
Sbjct: 122 LTYSDHAASNRTVKVFVVGMPNVGKSSVMNALRH------ASLHRRKVAVVGSHPGVTRN 175
Query: 191 IYS-LKIASHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILN 249
+ +++ N+Y++DTPGI+ P I E K AL A+ D + + Y L LN
Sbjct: 176 VGEVVRLFEGKNVYMVDTPGIMLPTILQPEDAIKFALVHAMKDGRLHNAVVVDYLLYRLN 235
Query: 250 FSD 252
D
Sbjct: 236 LID 238
>sp|Q17EJ1|MTG1_AEDAE Mitochondrial GTPase 1 OS=Aedes aegypti GN=AAEL003813 PE=3 SV=1
Length = 316
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 30/243 (12%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSR-RILVLNKMD 85
W+ HM + + ++ VD ++EV DARIP S + R + S + ILVLNK D
Sbjct: 19 WFPGHMGKGMKQMQQKLKQVDCVIEVHDARIPLSGRNSEFR--YTISGVKPHILVLNKKD 76
Query: 86 LASPTQFKEWITFFDQQ----------NCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSD 135
+ Q+ NC N +++ + Q + + + +
Sbjct: 77 KIDRRLQGRVVDRLQQEDSEARHILFTNCKDQSCNG-----IRKVMPLAQDLILSSNRFN 131
Query: 136 YDASSDTVTVMLLGIPNVGKSALANSLH--QIGRITAAEKGKLRHATVSPQPGETKDIYS 193
A +M++G+PNVGKS+L N L + + A++ G + G T+ + +
Sbjct: 132 R-ADQKEYCIMIIGVPNVGKSSLINVLRNRHLNKKGASQVGAV--------AGITRSVLN 182
Query: 194 -LKIASHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSD 252
+KI+ P +Y+LDTPGIL P I D E +LAL + D VG + +A Y L +LN
Sbjct: 183 KIKISEDPLVYLLDTPGILKPNIADTETGLRLALVSCLQDHLVGEELIADYLLYLLNKRG 242
Query: 253 EYK 255
+K
Sbjct: 243 NFK 245
>sp|O74776|MTG1_SCHPO Mitochondrial GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mtg1 PE=3 SV=1
Length = 328
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 117/256 (45%), Gaps = 38/256 (14%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
WY HM + + + DI +EVRDARIP +S + + + RI+V NK DL
Sbjct: 17 WYPGHMNKTLKRLKNLTSSNDIFVEVRDARIPLTSRNYVMEDF--LNKKNRIIVYNKCDL 74
Query: 87 AS----------------PTQFKEWITFFDQQNCP---SFGVNSHNKDN--VKEFLKFLQ 125
A QF+ +F + + P +F +K KE L+ ++
Sbjct: 75 ADTFHTKAKVSKHRIQNLAQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIR 134
Query: 126 AHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQP 185
V D +++ V V +G+PN GKS++ NSL + A K K A V P
Sbjct: 135 TLV------DQASANGRVYVYFVGMPNTGKSSILNSLRNV----ALRKSK--SAIVGNYP 182
Query: 186 GETKDIYSL-KIASHPNIYVLDTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYF 244
G TK I + ++ + ++Y+LDTPGI+ P I E KL+L G + + V + Y
Sbjct: 183 GVTKRISEIVRLFNDMDVYMLDTPGIMTPSITKPEDMLKLSLVGCVKEGIVHPVTVVDYL 242
Query: 245 LGILNFSDE--YKKWA 258
L LN D Y KW+
Sbjct: 243 LFHLNRIDPSLYSKWS 258
>sp|Q03151|MTG1_YEAST Mitochondrial GTPase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MTG1 PE=1 SV=1
Length = 367
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 31 HMAAATRAIADRMPLVDIILEVRDARIPFSSE---FDQL-RNHHPFSSSRRILVLNKMDL 86
H A + +P +++I+E+RD R P S+ FD++ R H +++V + DL
Sbjct: 37 HQVKALKTFEKLLPQMNMIIELRDIRAPLSTRNVVFDRIARKEHDVM---KLVVYTRKDL 93
Query: 87 ASPTQ-----FKEWITFFDQQNCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSD 141
+ K W ++ ++ NK +V+ LK L+ +Y+ ++
Sbjct: 94 MPGNKPYIGKLKNW---HEELGEKFILLDCRNKTDVRNLLKILEWQ-------NYELETN 143
Query: 142 T------VTVMLLGIPNVGKSALANSLHQI--GRITAAEKGKL-----RHATVSPQPGET 188
++ G+PNVGKS L NSL I ++ K K A V+ E
Sbjct: 144 GGYLPMGYRALITGMPNVGKSTLINSLRTIFHNQVNMGRKFKKVAKTGAEAGVTRATSEV 203
Query: 189 KDIYSLKIASHPNIYVLDTPGI-LPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGI 247
+ S S IY++DTPGI +P + D LAL G++ ++ V A Y L +
Sbjct: 204 IRVTSRNTESRNEIYLIDTPGIGVPGRVSDHNRMLGLALCGSVKNNLVDPIFQADYLLYL 263
Query: 248 LNFSD 252
+N +
Sbjct: 264 MNLQN 268
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 28/207 (13%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+IL V DAR P + + + + + I VLNK+DL WI Q++
Sbjct: 233 DVILHVIDARDPLGTRCRHVEKYLATEAPHKHLIFVLNKIDLVPSKTAAAWIRVL-QKDH 291
Query: 105 PSFGVNSHNKDNVKEFLKFLQAHVRNLRK--SDYDASSDTVTVMLLGIPNVGKSALANSL 162
P+ + S K+ F + + +L + S ++V L+G PNVGKS++ N+L
Sbjct: 292 PTCAMRSSIKN------PFGRGSLIDLLRQFSILHKDRKQISVGLVGYPNVGKSSIINAL 345
Query: 163 HQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDVEVCS 222
+GK A V+P PGETK + + IY++D PGI+PP +D
Sbjct: 346 ----------RGKP-VAKVAPIPGETKVWQYVTLMRR--IYLIDCPGIVPPNQND--TPQ 390
Query: 223 KLALTGAIGDSFVGGKELAQYFLGILN 249
L L G + V E QY +LN
Sbjct: 391 DLLLRGVVRVENVDNPE--QYIPAVLN 415
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 34/192 (17%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D++++V DAR P + + + +S + ILVLNK+DL + W+ ++
Sbjct: 218 DVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKVDLVPTSVAAAWVKILAKE-Y 276
Query: 105 PSFGV-----NSHNKDNVKEFLK-FLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSAL 158
P+ NS K ++ + L+ F H + ++V L+G PN GKS++
Sbjct: 277 PTIAFHASINNSFGKGSLIQILRQFASLH----------SDKKQISVGLIGFPNAGKSSI 326
Query: 159 ANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDV 218
N+L K + V+P PGETK ++ +A I+++D PGI+PP +D
Sbjct: 327 INTLR-----------KKKVCNVAPIPGETK-VWQY-VALMKRIFLIDCPGIVPPSSNDS 373
Query: 219 EVCSKLALTGAI 230
+ ++L L G +
Sbjct: 374 D--AELLLKGVV 383
>sp|Q21086|GNL3_CAEEL Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis
elegans GN=nst-1 PE=3 SV=1
Length = 556
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 1 MATSSSSLFKLAREIGTAVSQKKGGGWYGPHMAAATRAIADRMPLVDIILEVRDARIPFS 60
+A +S + +++ +A +K + A + + + D+I++V DAR P
Sbjct: 103 VAKASKQGTEFDKKVASAAEHEKFNTLDDKTIKAYASEVRKTVEIADVIIQVLDARDPLG 162
Query: 61 SEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEF 120
S + + R +L+LNK+DL ++W+ + Q P+ + ++
Sbjct: 163 SRSKSVEDQVLKGGKRLVLLLNKIDLVPRENVQKWLEYLRGQ-FPTIAFKASTQEQKSNI 221
Query: 121 LKFLQAHVRNLRKS-------------DYDASSD---TVTVMLLGIPNVGKSALANSLHQ 164
+F A + N S +Y + D ++ V ++G PNVGKS++ NSL
Sbjct: 222 GRFNSAILNNTETSKCVGADIVMKILANYCRNKDIKTSIRVGVVGFPNVGKSSVINSLK- 280
Query: 165 IGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDVEVCSKL 224
R A G L PG TK+I +++ NI ++D+PG++ D++ ++
Sbjct: 281 --RRKACNVGNL--------PGITKEIQEVEL--DKNIRLIDSPGVILVSQKDLDPI-EV 327
Query: 225 ALTGAI 230
AL AI
Sbjct: 328 ALKNAI 333
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2
PE=2 SV=1
Length = 483
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+I+++ DAR P + + + + IL+LNK DL +EWI ++
Sbjct: 200 DVIIQLLDARNPLGTRCKHVEEYLKKEKPHKHMILLLNKCDLIPTWCTREWIKQLSKE-Y 258
Query: 105 PSFGV-----NSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALA 159
P+ N K ++ + L+ N R+ ++V +G PN GKS++
Sbjct: 259 PTLAFHASINNPFGKGSLIQLLRQFSKLHSNRRQ---------ISVGFIGYPNTGKSSVI 309
Query: 160 NSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDVE 219
N+L + +P PGETK +++ S I+++D PGI+PP +D E
Sbjct: 310 NTLRS-----------KKVCNTAPIPGETKVWQYVRMTSK--IFMIDCPGIVPPNSNDSE 356
Query: 220 VCSKLALTGAIGDSFVGGKELAQYFLGILNFSD 252
+++ + GA+ V E QY ILN +
Sbjct: 357 --TEIIIKGALRIEKVSNPE--QYIHAILNLCE 385
>sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium
discoideum GN=gnl3 PE=3 SV=1
Length = 615
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 47/194 (24%)
Query: 47 DIILEVRDARIPFSSEFDQLRNH--HPFSSSRRILVLNKMDLASPTQFKEWITFF----- 99
D+IL+V DAR P ++ +++ + +L+LNK+DL W+ +
Sbjct: 146 DVILQVLDARDPMGCRCLEIEKMILERYTNKKIVLILNKIDLVPRENVLMWLKYLRNFYP 205
Query: 100 -------DQQNCPSFG--------------VNSHNKDNVKEFLKFLQAHVRNLRKSDYDA 138
QQ + G +NS ++ L+ L+ + R+L
Sbjct: 206 TLAFKCSTQQQKRNLGQQGGIQPELASNDMLNSTESLGAEQLLQLLKNYSRSLN------ 259
Query: 139 SSDTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIAS 198
+VTV ++G PNVGKS+L NSL + R V PG TK ++ ++
Sbjct: 260 IKTSVTVGIIGYPNVGKSSLINSLK-----------RTRSVGVGATPGFTK--FAQEVHL 306
Query: 199 HPNIYVLDTPGILP 212
N+ +LD+PGI+P
Sbjct: 307 DKNVKLLDSPGIVP 320
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG2 PE=3 SV=1
Length = 494
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 36/210 (17%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+++ V DAR P + + + + + I VLNK DL W+ +
Sbjct: 223 DVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKDR- 281
Query: 105 PSFG-----VNSHNKDNVKEFLK-FLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSAL 158
P+ NS K ++ + L+ F Q H ++V +G PN GKS++
Sbjct: 282 PTLAFHASITNSFGKGSLIQLLRQFSQLH----------TDRKQISVGFIGYPNTGKSSI 331
Query: 159 ANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDV 218
N+L K + V+P PGETK ++ I I+++D PGI+PP D
Sbjct: 332 INTLR-----------KKKVCQVAPIPGETK-VWQY-ITLMKRIFLIDCPGIVPPSTKDS 378
Query: 219 EVCSKLALTGAIGDSFVGGKELAQYFLGIL 248
E + G + V E QY G+L
Sbjct: 379 E--EDILFRGVVRVEHVSHPE--QYIPGVL 404
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG2 PE=1 SV=1
Length = 486
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+++ V DAR P + + + + + I VLNK DL W+ ++
Sbjct: 223 DVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAWVKHLSKER- 281
Query: 105 PSFG-----VNSHNKDNVKEFLK-FLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSAL 158
P+ NS K ++ + L+ F Q H ++V +G PN GKS++
Sbjct: 282 PTLAFHASITNSFGKGSLIQLLRQFSQLHT----------DRKQISVGFIGYPNTGKSSI 331
Query: 159 ANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDV 218
N+L K + V+P PGETK ++ I I+++D PGI+PP D
Sbjct: 332 INTLR-----------KKKVCQVAPIPGETK-VWQY-ITLMKRIFLIDCPGIVPPSSKDS 378
Query: 219 EVCSKLALTGAIGDSFVGGKELAQYFLGIL 248
E + G + V E QY G+L
Sbjct: 379 E--EDILFRGVVRVEHVTHPE--QYIPGVL 404
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG2 PE=3 SV=1
Length = 513
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 89/212 (41%), Gaps = 40/212 (18%)
Query: 47 DIILEVRDARIPFSSEF----DQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQ 102
D+++ V DAR P + D + N P I VLNK DL W+ ++
Sbjct: 222 DVVIHVLDARDPLGTRCKSVTDYMTNETPHKHL--IYVLNKCDLVPTWVAAAWVKHLSKE 279
Query: 103 NCPSFG-----VNSHNKDNVKEFLK-FLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKS 156
P+ NS K ++ + L+ F Q H ++V +G PN GKS
Sbjct: 280 R-PTLAFHASITNSFGKGSLIQLLRQFSQLH----------KDRHQISVGFIGYPNTGKS 328
Query: 157 ALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIH 216
++ N+L K + V+P PGETK ++ I I+++D PGI+PP
Sbjct: 329 SIINTLR-----------KKKVCQVAPIPGETK-VWQY-ITLMKRIFLIDCPGIVPPSSK 375
Query: 217 DVEVCSKLALTGAIGDSFVGGKELAQYFLGIL 248
D E + G + V E QY GIL
Sbjct: 376 DSE--EDILFRGVVRVEHVSHPE--QYIPGIL 403
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR-ILVLNKMDLASPTQFKEWITFFDQQ--- 102
D+IL V DAR P S+ ++ S +R IL+LNK+DL P ++W+ +
Sbjct: 177 DVILYVLDARDPESTRSRKVEEAVLQSQGKRLILILNKVDLIPPHVLEQWLNYLKSSFPT 236
Query: 103 ----------NCPSFGVNSHNKDNVKEFLKFLQAHVR--NLRKSDYDASSDTVTVMLLGI 150
N SF L+ L+ + NL++S + V ++G
Sbjct: 237 IPLRASSGAVNGTSFNRKLSQTTTASALLESLKTYSNNSNLKRS--------IVVGVIGY 288
Query: 151 PNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGI 210
PNVGKS++ N+L A G+ + V + G T + +KI + + +LD+PGI
Sbjct: 289 PNVGKSSVINAL------LARRGGQSKACPVGNEAGVTTSLREIKIDNK--LKILDSPGI 340
Query: 211 LPPEIH----DVEVCSKLALTGAI 230
P + VE ++LAL A+
Sbjct: 341 CFPSENKKRSKVEHEAELALLNAL 364
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG2
PE=3 SV=1
Length = 502
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 32/181 (17%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+++ V DAR P + + + + + I VLNK DL W+ +
Sbjct: 222 DVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLIYVLNKCDLVPTWLAAAWVKHLSKDR- 280
Query: 105 PSFG-----VNSHNKDNVKEFLK-FLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSAL 158
P+ NS K ++ + L+ F Q H ++V +G PN GKS++
Sbjct: 281 PTLAFHASITNSFGKGSLIQLLRQFSQLH----------KDRQQISVGFIGYPNTGKSSI 330
Query: 159 ANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDV 218
N+L K + V+P PGETK + + I+++D PGI+PP D
Sbjct: 331 INTLR-----------KKKVCQVAPIPGETKVWQYITLMKR--IFLIDCPGIVPPSAKDT 377
Query: 219 E 219
E
Sbjct: 378 E 378
>sp|Q8MT06|GNL3_DROME Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila
melanogaster GN=ns1 PE=1 SV=2
Length = 581
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 47 DIILEVRDARIPFSSEFDQLRN--HHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQN- 103
D++LEV DAR P + +++ + R +LVLNK DL WI +F +
Sbjct: 152 DVVLEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVPRENLNNWIKYFRRSGP 211
Query: 104 CPSFGVNSHNKDN------VKE-----------------FLKFLQAHVRNLRKSDYDASS 140
+F ++ ++ N ++E + L + RN
Sbjct: 212 VTAFKASTQDQANRLGRRKLREMKTEKAMQGSVCIGAELLMSMLGNYCRN------KGIK 265
Query: 141 DTVTVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHP 200
++ V ++GIPNVGKS++ NSL + R V PG TK + +++ S
Sbjct: 266 TSIRVGVVGIPNVGKSSIINSL-----------TRGRSCMVGSTPGVTKSMQEVELDSK- 313
Query: 201 NIYVLDTPGIL 211
I ++D PGI+
Sbjct: 314 -IKLIDCPGIV 323
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=NOG2 PE=3 SV=1
Length = 509
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+++ V DAR P + + + + + I VLNK DL W+ Q +
Sbjct: 215 DVVIHVLDARDPLGTRCTSVEQYIKKEAPHKHLIFVLNKCDLVPTWVAAAWVKHLSQ-DY 273
Query: 105 PSFG-----VNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALA 159
P+ NS K ++ + L+ + S ++V +G PN GKS++
Sbjct: 274 PTLAFHASITNSFGKGSLIQLLR---------QYSALHPDRQQISVGFIGYPNTGKSSII 324
Query: 160 NSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDVE 219
N+L K + +P PGETK ++ I I+++D PGI+PP D E
Sbjct: 325 NTLR-----------KKKVCKTAPIPGETK-VWQY-ITLMKRIFLIDCPGIVPPSQKDSE 371
Query: 220 V 220
Sbjct: 372 T 372
>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=grn1 PE=1 SV=1
Length = 470
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSS---RRILVLNKMDLASPTQFKEWITFFDQ-- 101
D+IL V DAR P + + SS+ R I V+NK+DL +W+T+
Sbjct: 164 DVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSEVLNKWVTYLRNFF 223
Query: 102 QNCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKS--DYDAS---SDTVTVMLLGIPNVGKS 156
P + N+K + + NL KS Y A ++TV ++G PNVGKS
Sbjct: 224 PTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKKKLKSSLTVGVIGYPNVGKS 283
Query: 157 ALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIH 216
++ N+L + + G+ G T + +K+ + + ++D+PGI+ P
Sbjct: 284 SVINAL-----VNRSANGRSAPCPAGNVAGMTTSLREVKLDNK--LRLVDSPGIVFPSSD 336
Query: 217 DVEVCSKLALTGAIGDSFVGGK-ELAQYFLGIL 248
+ +L + A+ + V +A Y L L
Sbjct: 337 SKDDLYRLVMLNAVSSTKVDDPVAVASYILQFL 369
>sp|Q9NVN8|GNL3L_HUMAN Guanine nucleotide-binding protein-like 3-like protein OS=Homo
sapiens GN=GNL3L PE=1 SV=1
Length = 582
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 42/191 (21%)
Query: 47 DIILEVRDARIPFSSEFDQLRNH--HPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNC 104
D+ILEV DAR P Q+ + + +LVLNK+DL ++W+ + +
Sbjct: 136 DVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEKWLDYL-RNEL 194
Query: 105 PSFGVNSHNKDNVKEF----LKFLQAHVRNLRKSDYDASSDTVTVM-------------- 146
P+ + + VK + QA L+ + + + V+
Sbjct: 195 PTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIR 254
Query: 147 --LLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETK---DIYSLKIASHPN 201
++G+PNVGKS+L NSL + R +V PG TK ++Y K
Sbjct: 255 VGVVGLPNVGKSSLINSLK-----------RSRACSVGAVPGITKFMQEVYLDKF----- 298
Query: 202 IYVLDTPGILP 212
I +LD PGI+P
Sbjct: 299 IRLLDAPGIVP 309
>sp|Q3T0J9|GNL3L_BOVIN Guanine nucleotide-binding protein-like 3-like protein OS=Bos
taurus GN=GNL3L PE=2 SV=1
Length = 575
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 42/191 (21%)
Query: 47 DIILEVRDARIPFSSEFDQLRNH--HPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNC 104
D+ILEV D+R P Q+ + + +LVLNK+DL ++W+ + +
Sbjct: 129 DVILEVLDSRDPLGCRCFQMEETVLRAEGNKKLVLVLNKIDLVPKEVVEKWLEYL-RNEL 187
Query: 105 PSFGVNSHNKDNVKEF----LKFLQAHVRNLRKSDYDASSDTVTVM-------------- 146
P+ + + VK + QA L+ + + + V+
Sbjct: 188 PTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIR 247
Query: 147 --LLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETK---DIYSLKIASHPN 201
++G+PNVGKS+L NSL + R +V PG TK ++Y K
Sbjct: 248 VGVVGLPNVGKSSLINSLK-----------RSRACSVGAVPGVTKFMQEVYLDKF----- 291
Query: 202 IYVLDTPGILP 212
I +LD PGI+P
Sbjct: 292 IRLLDAPGIVP 302
>sp|Q8R9J1|DER_THETN GTPase Der OS=Thermoanaerobacter tengcongensis (strain DSM 15242 /
JCM 11007 / NBRC 100824 / MB4) GN=der PE=3 SV=1
Length = 439
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKE----WITFFDQQ 102
D+IL V DAR E +++ N + ILV NK+D FKE + FF
Sbjct: 85 DLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCNKVD-----SFKEMPASFYDFFKLG 139
Query: 103 NCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALANSL 162
+++ N + E L ++ L ++D + +T+ + ++G PNVGKS+L N
Sbjct: 140 LGEPIPISASNGLGIGELL---DEVIKRLPENDVEYEEETIKIAVIGRPNVGKSSLVN-- 194
Query: 163 HQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVL-DTPGI 210
RI E+ VS PG T+D Y+L DT GI
Sbjct: 195 ----RILGEER-----VIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGI 234
>sp|P0CS94|NOG2_CRYNV Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii GN=NOG2 PE=3 SV=1
Length = 693
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+++ V DAR P + + + + + + VLNK+DL W+ +
Sbjct: 209 DVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHL-SLSA 267
Query: 105 PSFGV-----NSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALA 159
P+ NS K ++ + L+ S + ++V +G PN GKS++
Sbjct: 268 PTIAFHASINNSFGKGSLIQLLRQF---------SVLHSDKKQISVGFIGYPNTGKSSII 318
Query: 160 NSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHD 217
N+L K + TV+P PGETK + + IY++D PGI+P D
Sbjct: 319 NTLK-----------KKKVCTVAPIPGETKVWQYITLMRR--IYLIDCPGIVPVSAKD 363
>sp|J9VQ03|NOG2_CRYNH Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=NOG2 PE=3 SV=2
Length = 720
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWITFFDQQNC 104
D+++ V DAR P + + + + + + VLNK+DL W+ +
Sbjct: 236 DVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLVPTWVTARWVKHL-SLSA 294
Query: 105 PSFGV-----NSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALA 159
P+ NS K ++ + L+ S + ++V +G PN GKS++
Sbjct: 295 PTIAFHASINNSFGKGSLIQLLRQF---------SVLHSDKKQISVGFIGYPNTGKSSII 345
Query: 160 NSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHD 217
N+L K + TV+P PGETK + + IY++D PGI+P D
Sbjct: 346 NTLK-----------KKKVCTVAPIPGETKVWQYITLMRR--IYLIDCPGIVPVSAKD 390
>sp|Q8CI11|GNL3_MOUSE Guanine nucleotide-binding protein-like 3 OS=Mus musculus GN=Gnl3
PE=1 SV=2
Length = 538
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR-ILVLNKMDLASPTQFKEWITFFDQQNCP 105
DI+LEV DAR P Q+ S S++ ILVLNK DL + W+ + +++ P
Sbjct: 140 DIVLEVLDARDPLGCRCPQIEEAVIQSGSKKLILVLNKSDLVPKENLENWLNYLNKE-LP 198
Query: 106 S--FGVNSHNKDN---------VKEFLKFLQAHVRNLRK--SDYDASS-DTVTVMLLGIP 151
+ F +++ K+ V F + L K D+ S + V ++G P
Sbjct: 199 TVVFKASTNLKNRKTFKIKKKKVVPFQSKICCGKEALWKLLGDFQQSCGKDIQVGVIGFP 258
Query: 152 NVGKSALANSLHQ 164
NVGKS++ NSL Q
Sbjct: 259 NVGKSSVINSLKQ 271
>sp|B0K8N3|DER_THEP3 GTPase Der OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=der PE=3 SV=1
Length = 439
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKE----WITFFDQQ 102
D+IL + DA+ E +++ N + ILV NK+D FKE + FF
Sbjct: 85 DVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVD-----SFKEMPPTYYDFFSLG 139
Query: 103 NCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALANSL 162
+++ N + E L V+ L + + + + +T+ + ++G PNVGKS+L N
Sbjct: 140 LGNPIPISASNGLGIGELL---DEVVKKLPQEELEYTEETIKIAVIGKPNVGKSSLVN-- 194
Query: 163 HQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVL-DTPGI 210
+I E+ VS PG T+D + YVL DT GI
Sbjct: 195 ----KILGEER-----VIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGI 234
>sp|B0K3E4|DER_THEPX GTPase Der OS=Thermoanaerobacter sp. (strain X514) GN=der PE=3 SV=1
Length = 439
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKE----WITFFDQQ 102
D+IL + DA+ E +++ N + ILV NK+D FKE + FF
Sbjct: 85 DVILFLVDAKEGLMPEDEEIANILRRAKKEVILVCNKVD-----SFKEMPPTYYDFFSLG 139
Query: 103 NCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALANSL 162
+++ N + E L V+ L + + + + +T+ + ++G PNVGKS+L N
Sbjct: 140 LGNPIPISASNGLGIGELL---DEVVKRLPQEELEYTEETIKIAVIGKPNVGKSSLVN-- 194
Query: 163 HQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVL-DTPGI 210
+I E+ VS PG T+D + YVL DT GI
Sbjct: 195 ----KILGEER-----VIVSNIPGTTRDAIDTPFSKDGKNYVLIDTAGI 234
>sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3
SV=1
Length = 731
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 50/194 (25%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR--ILVLNKMDLASPTQFKEWIT----FFD 100
D+++ V DAR P + + + + + + VLNK+DL PT W+T +
Sbjct: 234 DVVIHVLDARDPLGTRCKPVVEYLRKEKAHKHLVYVLNKVDLV-PT----WVTSGPYAYA 288
Query: 101 QQNCPSFGV-----------------NSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTV 143
N P+ V NS K ++ + L+ S + +
Sbjct: 289 YANGPARWVKHLSLSAPTIAFHASINNSFGKGSLIQLLRQF---------SVLHSDKKQI 339
Query: 144 TVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIY 203
+V +G PN GKS++ N+L K + TV+P PGETK + + IY
Sbjct: 340 SVGFIGYPNTGKSSIINTLK-----------KKKVCTVAPIPGETKVWQYITLMRR--IY 386
Query: 204 VLDTPGILPPEIHD 217
++D PGI+P D
Sbjct: 387 LIDCPGIVPVSAKD 400
>sp|Q58859|Y1464_METJA Uncharacterized GTP-binding protein MJ1464 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1464 PE=3 SV=1
Length = 373
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQNCPS 106
D+IL V DAR P + +L + I VLNK DL ++W F + +
Sbjct: 25 DVILLVLDARDPEMTRNRELEKKIKAKGKKLIYVLNKADLVPKDILEKWKEVFGEN---T 81
Query: 107 FGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALANSLHQIG 166
V++ + K + ++ ++ + K + V ++G PNVGKS++ N+L
Sbjct: 82 VFVSAKRRLGTKILREMIKQSLKEMGKKEG-------KVGIVGYPNVGKSSIINALT--- 131
Query: 167 RITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPPEIHDVEVCSKLAL 226
GK R A G TK +++ NI ++DTPG+L D L +
Sbjct: 132 -------GK-RKALTGSVAGLTKGEQWVRLTK--NIKLMDTPGVLEMRDED-----DLVI 176
Query: 227 TGAI 230
+GA+
Sbjct: 177 SGAL 180
>sp|Q9BVP2|GNL3_HUMAN Guanine nucleotide-binding protein-like 3 OS=Homo sapiens GN=GNL3
PE=1 SV=2
Length = 549
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 47 DIILEVRDARIPFSSEFDQLRNHHPFSSSRR-ILVLNKMDLASPTQFKEWITFFDQQNCP 105
D++LEV DAR P Q+ S ++ +L+LNK DL + W+ + ++ P
Sbjct: 142 DVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYLKKE-LP 200
Query: 106 S--FGVNSHNKD------------NVKEF---LKFLQAHVRNLRKSDYDASSDTVTVMLL 148
+ F ++ KD N F + F + + L + S + V ++
Sbjct: 201 TVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGVI 260
Query: 149 GIPNVGKSALANSLHQ 164
G PNVGKS++ NSL Q
Sbjct: 261 GFPNVGKSSIINSLKQ 276
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1
Length = 731
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 47 DIILEVRDARIPFSSEFDQ----LRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQ 102
D++++V DAR P + L+ P+ I VLNK DL K W+ Q
Sbjct: 218 DVVVQVLDARDPMGTRSPHIETYLKKEKPWKHL--IFVLNKCDLVPTWATKRWVAVLSQ- 274
Query: 103 NCPSFGVNSH--NKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALAN 160
+ P+ ++ N F++ L R K D ++V +G PNVGKS++ N
Sbjct: 275 DYPTLAFHASLTNPFGKGAFIQLL----RQFGKLHTDKKQ--ISVGFIGYPNVGKSSVIN 328
Query: 161 SLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPP 213
+L + V+P GETK + + I+++D PG++ P
Sbjct: 329 TLRS-----------KKVCNVAPIAGETKVWQYITLMRR--IFLIDCPGVVYP 368
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=2
Length = 728
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 47 DIILEVRDARIPFSSEFDQ----LRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQ 102
D++++V DAR P + L+ P+ I VLNK DL K W+ Q
Sbjct: 218 DVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHL--IFVLNKCDLVPTWATKRWVAVLSQ- 274
Query: 103 NCPSFGVNSH--NKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALAN 160
+ P+ ++ N F++ L R K D ++V +G PNVGKS++ N
Sbjct: 275 DYPTLAFHASLTNPFGKGAFIQLL----RQFGKLHTDKKQ--ISVGFIGYPNVGKSSVIN 328
Query: 161 SLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVLDTPGILPP 213
+L + V+P GETK + + I+++D PG++ P
Sbjct: 329 TLRS-----------KKVCNVAPIAGETKVWQYITLMRR--IFLIDCPGVVYP 368
>sp|Q49435|RBGA_MYCGE Probable ribosome biogenesis GTPase A OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=rbgA PE=3
SV=1
Length = 270
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 27/236 (11%)
Query: 27 WYGPHMAAATRAIADRMPLVDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDL 86
W+ HM + +D I+E+ DAR P + ++ ++ F + ++++ K DL
Sbjct: 11 WFPGHMKKIHDQLKKLSSQIDGIIEIVDARAPTLTHNSEIISY--FLNKPKLILALKTDL 68
Query: 87 ASPTQFKEWITFFDQQNCPSFGVNSHNKDNVKEFL-KFLQAHVRNLRKSDYDASSDTVTV 145
A K+ F P K F K Q + L + +
Sbjct: 69 AQYKPNKK--ILFGSLKEPFKLKKKVLKTLTTLFANKRQQLKAKGLLIKQFRLA------ 120
Query: 146 MLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIYVL 205
++G+PNVGKS+L N L I + H V+ + G TK + ++I+ P + +
Sbjct: 121 -VIGMPNVGKSSLINLL--INK---------NHLKVANRAGITKSLNWIQIS--PELLLS 166
Query: 206 DTPGILPPEIHDVEVCSKLALTGAIGDSFVGGKELAQYFLGILNFSDEYKKWAKFS 261
DTPG+ I ++++ KL LT I V +E+ + L YK+ F
Sbjct: 167 DTPGVFLKRIDEIQIGYKLVLTNVIRREVVNIEEVGMFAFNYL--KKHYKQLLPFE 220
>sp|Q10190|LSG1_SCHPO Large subunit GTPase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lsg1 PE=3 SV=1
Length = 616
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 53/220 (24%)
Query: 47 DIILEVRDARIPF---SSEFDQ-LRNHHPFSSSRRILVLNKMDLASPTQFKEWITFFDQQ 102
D+++++ DAR P S+ +Q ++ P S + L++NK D+ + Q W ++F++
Sbjct: 172 DVVVQIVDARNPLFFRSAHLEQYVKEVGP--SKKNFLLVNKADMLTEEQRNYWSSYFNEN 229
Query: 103 NCPSF---------------GVNSHNKDNVKEFLKFLQAHVRNLRKSD----------YD 137
N P + ++ + E + LQA ++ S ++
Sbjct: 230 NIPFLFFSARMAAEANERGEDLETYESTSSNEIPESLQADENDVHSSRIATLKVLEGIFE 289
Query: 138 ASSDTV-------TVMLLGIPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKD 190
+ T+ T L+G PNVGKS+ N+L +G + +VS PG+TK
Sbjct: 290 KFASTLPDGKTKMTFGLVGYPNVGKSSTINAL--VGS---------KKVSVSSTPGKTKH 338
Query: 191 IYSLKIASHPNIYVLDTPGILPPEIHDVEVCSKLALTGAI 230
++ ++ + +LD PG++ P + + L L G +
Sbjct: 339 FQTINLSE--KVSLLDCPGLVFPSFATTQ--ADLVLDGVL 374
>sp|Q661B2|DER_BORGA GTPase Der OS=Borrelia garinii (strain PBi) GN=der PE=3 SV=1
Length = 433
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 27/170 (15%)
Query: 46 VDIILEVRDARIPFSSEFDQLRNHHPFSSSRRILVLNKMDLASPTQFKEWIT--FFDQQN 103
VD+IL V D +++ + +SS + ILVLNK+D T+ KE++ F +
Sbjct: 84 VDLILLVLDVNEILLEDYEIIERLRKYSS-KVILVLNKVD----TKDKEFLAHKFHNLGF 138
Query: 104 CPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLGIPNVGKSALANSL- 162
F V++ ++ + + FL+ V + + + V ++G PN GKS L N L
Sbjct: 139 KRYFLVSALHRRGITKLRDFLKVEVGRVNIEE----EVNIKVGIIGKPNSGKSTLINYLS 194
Query: 163 -HQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASHPNIY-VLDTPGI 210
++I + VS QPG T+D K+ + ++ ++DT GI
Sbjct: 195 GNEI-------------SIVSDQPGTTRDFIKTKLTRNGKVFEIIDTAGI 231
>sp|C1A8T3|DER_GEMAT GTPase Der OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 /
JCM 11422 / NBRC 100505) GN=der PE=3 SV=1
Length = 436
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 34 AATRAIADRMPLVDIILEVRDARI---PFSSEF-DQLRNHHPFSSSRRILVLNKMDLASP 89
A R + + D++L V DA++ P + D LRN S +LV NK+D +
Sbjct: 72 AIRRQVMQAIEEADLMLFVVDAKVGVHPSDARIVDILRN----SQKPWMLVANKVDDPAS 127
Query: 90 TQFKEWITFFDQQNCPSFGVNSHNKDNVKEFLKFLQAHVRNLRKSDYDASSDTVTVMLLG 149
T F E FF + V++ N + L + A++ + + + DA V V ++G
Sbjct: 128 TDFYE---FFRLGVTDVYPVSAQNGKGSGDLLDAVVANIPEVEEEERDA----VRVAVIG 180
Query: 150 IPNVGKSALANSLHQIGRITAAEKGKLRHATVSPQPGETKDIYSLKIASH-PNIYVLDTP 208
PNVGKS+ N L R+ VS + G T+D + H ++ +DT
Sbjct: 181 RPNVGKSSFVNRLLGEDRL-----------VVSDESGTTRDAIDAPMRYHDTDLVFVDTA 229
Query: 209 GI 210
G+
Sbjct: 230 GL 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,915,607
Number of Sequences: 539616
Number of extensions: 4475209
Number of successful extensions: 17074
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 948
Number of HSP's that attempted gapping in prelim test: 16189
Number of HSP's gapped (non-prelim): 1689
length of query: 298
length of database: 191,569,459
effective HSP length: 117
effective length of query: 181
effective length of database: 128,434,387
effective search space: 23246624047
effective search space used: 23246624047
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)