Query 022356
Match_columns 298
No_of_seqs 199 out of 1267
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 04:09:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.5 2.6E-14 9E-19 102.7 8.5 66 213-279 1-67 (68)
2 3dxs_X Copper-transporting ATP 99.4 1.4E-12 4.7E-17 93.7 8.6 66 213-278 1-71 (74)
3 1cc8_A Protein (metallochapero 99.4 1.9E-12 6.4E-17 93.2 9.3 66 213-278 4-71 (73)
4 4a4j_A Pacszia, cation-transpo 99.4 1.8E-12 6.1E-17 91.7 8.8 63 214-276 2-68 (69)
5 3fry_A Probable copper-exporti 99.4 1.8E-12 6E-17 94.0 7.8 66 212-279 3-70 (73)
6 2crl_A Copper chaperone for su 99.3 1E-11 3.5E-16 96.5 9.4 70 212-281 17-87 (98)
7 2xmm_A SSR2857 protein, ATX1; 99.2 1.8E-11 6.1E-16 83.1 6.8 60 215-274 2-63 (64)
8 2k2p_A Uncharacterized protein 99.2 2.7E-11 9.2E-16 91.7 7.3 69 206-274 14-84 (85)
9 2xmw_A PACS-N, cation-transpor 99.2 9.2E-11 3.1E-15 81.1 8.8 64 213-276 2-69 (71)
10 2roe_A Heavy metal binding pro 99.2 3.4E-11 1.2E-15 83.9 6.3 60 217-276 3-64 (66)
11 2l3m_A Copper-ION-binding prot 99.2 1.1E-10 3.7E-15 81.2 8.3 63 212-274 3-70 (71)
12 1q8l_A Copper-transporting ATP 99.2 9.6E-11 3.3E-15 86.1 8.3 71 209-279 4-79 (84)
13 1aw0_A Menkes copper-transport 99.2 1.6E-10 5.4E-15 80.3 8.7 63 214-276 3-70 (72)
14 1jww_A Potential copper-transp 99.1 2E-10 6.9E-15 81.6 9.0 68 213-280 2-74 (80)
15 1osd_A MERP, hypothetical prot 99.1 1.9E-10 6.3E-15 80.0 8.4 64 213-276 2-70 (72)
16 1mwy_A ZNTA; open-faced beta-s 99.1 2.5E-10 8.5E-15 80.7 8.9 64 212-275 1-67 (73)
17 1opz_A Potential copper-transp 99.1 2E-10 6.8E-15 80.1 8.3 67 211-277 3-74 (76)
18 1fvq_A Copper-transporting ATP 99.1 1.6E-10 5.5E-15 80.3 7.8 64 215-278 3-70 (72)
19 2qif_A Copper chaperone COPZ; 99.1 2.6E-10 8.9E-15 77.2 8.6 62 213-274 1-67 (69)
20 1y3j_A Copper-transporting ATP 99.1 1.4E-10 4.7E-15 82.9 7.5 66 213-278 2-72 (77)
21 3cjk_B Copper-transporting ATP 99.1 2.8E-10 9.5E-15 80.4 8.5 65 214-278 2-71 (75)
22 1kvi_A Copper-transporting ATP 99.1 3.8E-10 1.3E-14 80.7 9.2 66 213-278 7-77 (79)
23 1cpz_A Protein (COPZ); copper 99.1 4.1E-10 1.4E-14 77.2 7.9 61 216-276 2-67 (68)
24 2g9o_A Copper-transporting ATP 99.1 4.1E-10 1.4E-14 84.9 8.1 67 214-280 3-77 (90)
25 2kkh_A Putative heavy metal tr 99.1 1.2E-09 4E-14 82.4 10.5 72 209-280 11-87 (95)
26 1yg0_A COP associated protein; 99.1 4.3E-10 1.5E-14 76.6 7.1 59 215-273 2-64 (66)
27 2kyz_A Heavy metal binding pro 99.1 3.2E-10 1.1E-14 79.3 6.6 59 215-275 2-62 (67)
28 2kt2_A Mercuric reductase; nme 99.0 4.3E-10 1.5E-14 78.0 6.6 60 217-276 3-66 (69)
29 2ldi_A Zinc-transporting ATPas 99.0 5.5E-10 1.9E-14 76.4 6.7 62 213-274 2-68 (71)
30 1yjr_A Copper-transporting ATP 99.0 7.7E-10 2.6E-14 77.4 7.6 63 214-276 4-71 (75)
31 1p6t_A Potential copper-transp 99.0 1.1E-09 3.9E-14 87.3 9.0 70 214-283 74-148 (151)
32 2ew9_A Copper-transporting ATP 99.0 1.2E-09 4.2E-14 86.5 8.7 64 214-277 80-148 (149)
33 2aj0_A Probable cadmium-transp 99.0 8.7E-10 3E-14 77.7 6.9 63 213-279 2-68 (71)
34 2ofg_X Zinc-transporting ATPas 99.0 3.1E-09 1E-13 83.5 10.3 66 212-277 6-76 (111)
35 1qup_A Superoxide dismutase 1 98.9 2.5E-09 8.7E-14 95.7 8.9 67 214-280 6-73 (222)
36 2rop_A Copper-transporting ATP 98.8 1.1E-08 3.9E-13 86.9 9.8 67 213-279 121-192 (202)
37 2ew9_A Copper-transporting ATP 98.8 1.4E-08 4.8E-13 80.4 8.8 65 213-277 3-72 (149)
38 1jk9_B CCS, copper chaperone f 98.8 1E-08 3.5E-13 93.6 7.7 67 213-279 6-73 (249)
39 2rop_A Copper-transporting ATP 98.6 8.5E-08 2.9E-12 81.5 7.3 61 211-271 17-81 (202)
40 1p6t_A Potential copper-transp 98.5 4.7E-07 1.6E-11 72.1 7.9 62 212-273 4-70 (151)
41 3j09_A COPA, copper-exporting 98.3 1E-06 3.5E-11 90.1 8.0 61 215-275 3-68 (723)
42 3lno_A Putative uncharacterize 73.8 2.6 9.1E-05 33.1 3.5 36 215-250 45-87 (108)
43 3cq1_A Putative uncharacterize 71.3 3.4 0.00012 32.0 3.6 35 215-249 42-82 (103)
44 1uwd_A Hypothetical protein TM 66.4 3.8 0.00013 31.6 2.9 35 215-249 43-83 (103)
45 4gwb_A Peptide methionine sulf 62.2 20 0.00069 31.0 6.9 53 214-271 3-73 (168)
46 2jsx_A Protein NAPD; TAT, proo 61.5 20 0.00068 27.9 6.2 46 226-271 17-63 (95)
47 1fvg_A Peptide methionine sulf 59.0 22 0.00075 31.6 6.7 56 211-271 41-118 (199)
48 3bpd_A Uncharacterized protein 57.7 9.8 0.00033 30.7 3.8 59 212-271 5-72 (100)
49 2raq_A Conserved protein MTH88 56.8 14 0.00047 29.7 4.6 58 213-271 6-72 (97)
50 2x3d_A SSO6206; unknown functi 56.8 15 0.0005 29.5 4.7 58 213-271 4-71 (96)
51 2j89_A Methionine sulfoxide re 56.5 23 0.00077 32.9 6.6 56 211-271 92-169 (261)
52 3bqh_A PILB, peptide methionin 54.8 23 0.00079 31.3 6.1 54 213-271 2-77 (193)
53 1ff3_A Peptide methionine sulf 51.0 33 0.0011 30.8 6.6 56 211-271 40-117 (211)
54 3e0m_A Peptide methionine sulf 50.6 29 0.00098 32.9 6.4 54 213-271 2-75 (313)
55 1nwa_A Peptide methionine sulf 49.7 43 0.0015 29.9 7.1 54 213-271 25-96 (203)
56 3pim_A Peptide methionine sulf 44.8 40 0.0014 29.7 6.0 57 210-271 16-102 (187)
57 2cpj_A Non-POU domain-containi 35.4 1.2E+02 0.0042 21.7 7.4 53 217-270 17-70 (99)
58 2cpq_A FragIle X mental retard 33.8 1.3E+02 0.0043 23.4 6.7 58 213-271 14-75 (91)
59 1zzo_A RV1677; thioredoxin fol 29.4 1.6E+02 0.0054 21.1 7.3 33 216-248 28-64 (136)
60 2fwh_A Thiol:disulfide interch 29.1 90 0.0031 23.6 5.2 35 215-249 33-74 (134)
61 1owx_A Lupus LA protein, SS-B, 23.6 1.6E+02 0.0054 23.7 5.9 57 215-271 18-76 (121)
62 2dnh_A Bruno-like 5, RNA bindi 22.9 2.1E+02 0.0073 20.5 8.1 55 216-271 16-76 (105)
63 1t1v_A SH3BGRL3, SH3 domain-bi 21.7 96 0.0033 22.4 3.9 36 214-250 2-42 (93)
64 2kgs_A Uncharacterized protein 21.3 31 0.0011 28.0 1.1 38 232-269 67-104 (132)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.53 E-value=2.6e-14 Score=102.70 Aligned_cols=66 Identities=26% Similarity=0.498 Sum_probs=61.7
Q ss_pred ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCC
Q 022356 213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPA 279 (298)
Q Consensus 213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~ 279 (298)
|++++|+|||+|++|+.+|+++|.+++|| .+.||+.+++++|.+.+++++|.++|++. |.+++|..
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 56788999999999999999999999999 99999999999999999999999999998 99998854
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.38 E-value=1.4e-12 Score=93.66 Aligned_cols=66 Identities=20% Similarity=0.336 Sum_probs=60.9
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP 278 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp 278 (298)
|++++|.| ||+|++|+.+|+++|.+++||..+.||+.+++++|..+ ++.++|.++|+++ |.++++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 67889999 99999999999999999999999999999999999853 6899999999998 9888764
No 3
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.38 E-value=1.9e-12 Score=93.24 Aligned_cols=66 Identities=26% Similarity=0.397 Sum_probs=62.3
Q ss_pred ceEEEEEEeecchhhHHHHHHHhhccC-CcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECC
Q 022356 213 NQVVVLRVSLHCKGCEGKVRKHLSRMK-GVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWP 278 (298)
Q Consensus 213 mqtVvLkVgM~C~gCa~KIeKAL~kIe-GVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp 278 (298)
|++++|+|.|+|++|+.+|+++|.+++ ||..+.||+.+++++|.+.++++.|.++|++. |.+++|.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 678899999999999999999999999 99999999999999999989999999999997 9888874
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.38 E-value=1.8e-12 Score=91.70 Aligned_cols=63 Identities=22% Similarity=0.577 Sum_probs=58.7
Q ss_pred eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEE--ecCCHHHHHHHHHhh-cCeeE
Q 022356 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVV--GDVTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~--G~vdp~eLlkaL~Kl-K~Ael 276 (298)
++++|.| ||+|.+|+.+|+++|.+++||..+.||+.+++++|. +.+++++|.++|++. |.+++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence 5789999 999999999999999999999999999999999999 568999999999997 88765
No 5
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.36 E-value=1.8e-12 Score=94.04 Aligned_cols=66 Identities=20% Similarity=0.342 Sum_probs=61.9
Q ss_pred CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCC
Q 022356 212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPA 279 (298)
Q Consensus 212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~ 279 (298)
.|++++|.| ||+|.+|+.+|+++|.+ +||..+.||+.+++++|.++ +++.|.++|+++ |.+++++.
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 578899999 99999999999999999 99999999999999999998 999999999998 99888763
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1e-11 Score=96.54 Aligned_cols=70 Identities=20% Similarity=0.326 Sum_probs=64.2
Q ss_pred CceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCCCc
Q 022356 212 SNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPAAA 281 (298)
Q Consensus 212 ~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~~~ 281 (298)
.+.+++|+|.|+|.+|+.+|+++|.+++||..|.||+..++++|.+.++++.|.++|+++ |.+++|....
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGS 87 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCC
Confidence 357788999999999999999999999999999999999999999989999999999998 9999886443
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.23 E-value=1.8e-11 Score=83.15 Aligned_cols=60 Identities=20% Similarity=0.416 Sum_probs=55.5
Q ss_pred EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCe
Q 022356 215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA 274 (298)
Q Consensus 215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~A 274 (298)
+++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.+.++.+.|.++|+++ |.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 457999 999999999999999999999999999999999999888999999999986 754
No 8
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.21 E-value=2.7e-11 Score=91.71 Aligned_cols=69 Identities=16% Similarity=0.246 Sum_probs=57.7
Q ss_pred CCCCCCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCe
Q 022356 206 RSEKPPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA 274 (298)
Q Consensus 206 ~~k~~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~A 274 (298)
.+.....+.+++|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|.+.++++.|.++|+++ |.+
T Consensus 14 ~~~~~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 14 RENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp --------CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred cccccccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 344556678889999 999999999999999999999999999999999999889999999999987 754
No 9
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.19 E-value=9.2e-11 Score=81.10 Aligned_cols=64 Identities=20% Similarity=0.499 Sum_probs=56.3
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeE
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~Ael 276 (298)
++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|++. |.+.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV 69 (71)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred CcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence 46788999 99999999999999999999999999999999999854 6788899999887 76654
No 10
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.18 E-value=3.4e-11 Score=83.89 Aligned_cols=60 Identities=22% Similarity=0.454 Sum_probs=55.2
Q ss_pred EEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeE
Q 022356 217 VLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 217 vLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Ael 276 (298)
.|.| ||+|++|+.+|+++|.+++||..+.+|+..++++|.+.++.+.|.++|+++ |.+..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEe
Confidence 5889 999999999999999999999999999999999997778999999999987 77654
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.17 E-value=1.1e-10 Score=81.25 Aligned_cols=63 Identities=21% Similarity=0.374 Sum_probs=56.6
Q ss_pred CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCe
Q 022356 212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNA 274 (298)
Q Consensus 212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~A 274 (298)
.|.+++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.|.++|+++ |.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 467889999 9999999999999999999999999999999999984 36788999999886 654
No 12
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.16 E-value=9.6e-11 Score=86.07 Aligned_cols=71 Identities=14% Similarity=0.350 Sum_probs=63.3
Q ss_pred CCCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECCC
Q 022356 209 KPPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWPA 279 (298)
Q Consensus 209 ~~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp~ 279 (298)
+.+...++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+ ++.+.|.++|+.+ |.+.++..
T Consensus 4 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 4 AQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp SSSSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred cccCceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence 456677889999 99999999999999999999999999999999999863 5789999999987 88877654
No 13
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.16 E-value=1.6e-10 Score=80.34 Aligned_cols=63 Identities=24% Similarity=0.440 Sum_probs=56.5
Q ss_pred eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael 276 (298)
++++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|++. |.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 4578999 99999999999999999999999999999999999864 6788999999987 76654
No 14
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.14 E-value=2e-10 Score=81.57 Aligned_cols=68 Identities=18% Similarity=0.414 Sum_probs=60.7
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeECCCC
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFWPAA 280 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelwp~~ 280 (298)
|.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.. .++.+.|.++|.++ |.+.+++..
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~ 74 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ 74 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCSS
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCcc
Confidence 56788999 9999999999999999999999999999999999975 36788999999987 888887654
No 15
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.14 E-value=1.9e-10 Score=79.99 Aligned_cols=64 Identities=23% Similarity=0.448 Sum_probs=57.2
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael 276 (298)
++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|++. |.+.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 45678999 99999999999999999999999999999999999853 6788999999987 77654
No 16
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.13 E-value=2.5e-10 Score=80.69 Aligned_cols=64 Identities=23% Similarity=0.410 Sum_probs=56.3
Q ss_pred CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecC-CHHHHHHHHHhh-cCee
Q 022356 212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDV-TPLSVLASISKV-KNAQ 275 (298)
Q Consensus 212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~v-dp~eLlkaL~Kl-K~Ae 275 (298)
.|+++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+. ..+.|.++|+.+ |.+.
T Consensus 1 ~m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~ 67 (73)
T 1mwy_A 1 SGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLR 67 (73)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEE
T ss_pred CCeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccc
Confidence 367889999 999999999999999999999999999999999998653 367788889887 7654
No 17
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.13 E-value=2e-10 Score=80.12 Aligned_cols=67 Identities=22% Similarity=0.484 Sum_probs=59.2
Q ss_pred CCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeEC
Q 022356 211 PSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFW 277 (298)
Q Consensus 211 ~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelw 277 (298)
..+.++.|.| ||+|.+|+.+|+++|..++||..+.+|+..++++|.. .++.+.|.++|++. |.+.+|
T Consensus 3 ~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 3 SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp CCCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred ccceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 3467889999 9999999999999999999999999999999999985 36788999999887 876654
No 18
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.13 E-value=1.6e-10 Score=80.31 Aligned_cols=64 Identities=25% Similarity=0.456 Sum_probs=58.0
Q ss_pred EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeECC
Q 022356 215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KNAQFWP 278 (298)
Q Consensus 215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~Aelwp 278 (298)
++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|++. |.+++|.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 568999 99999999999999999999999999999999999854 6788999999987 8888774
No 19
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.13 E-value=2.6e-10 Score=77.15 Aligned_cols=62 Identities=24% Similarity=0.414 Sum_probs=55.0
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNA 274 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~A 274 (298)
|.++.|.| ||+|.+|+.+|+++|..++||..+.+|+..++++|..+ ++.+.|.++|+.. |.+
T Consensus 1 m~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred CeEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 45678999 99999999999999999999999999999999999853 6788899999886 643
No 20
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.13 E-value=1.4e-10 Score=82.85 Aligned_cols=66 Identities=20% Similarity=0.369 Sum_probs=59.6
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP 278 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp 278 (298)
|+++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|+.+ |.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 77889999 99999999999999999999999999999999999853 5788999999987 8877653
No 21
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.11 E-value=2.8e-10 Score=80.38 Aligned_cols=65 Identities=20% Similarity=0.465 Sum_probs=57.9
Q ss_pred eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP 278 (298)
Q Consensus 214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp 278 (298)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|+++ |.+.++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 3568999 99999999999999999999999999999999999853 5789999999987 8877654
No 22
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.11 E-value=3.8e-10 Score=80.67 Aligned_cols=66 Identities=20% Similarity=0.446 Sum_probs=59.0
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECC
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWP 278 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp 278 (298)
+.++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+ ++.+.|.++|+++ |.+.+..
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 56788999 99999999999999999999999999999999999853 5788999999987 8776643
No 23
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.08 E-value=4.1e-10 Score=77.15 Aligned_cols=61 Identities=20% Similarity=0.437 Sum_probs=54.9
Q ss_pred EEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356 216 VVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 216 VvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael 276 (298)
+.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|++. |.+++
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 36899 99999999999999999999999999999999999864 6788999999987 77664
No 24
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.07 E-value=4.1e-10 Score=84.91 Aligned_cols=67 Identities=25% Similarity=0.408 Sum_probs=58.6
Q ss_pred eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh----cCeeECCCC
Q 022356 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV----KNAQFWPAA 280 (298)
Q Consensus 214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl----K~Aelwp~~ 280 (298)
.++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|.. .++.+.|.++|+++ |.+.+|.+.
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 5678999 9999999999999999999999999999999999985 36788999999875 677776543
No 25
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.06 E-value=1.2e-09 Score=82.37 Aligned_cols=72 Identities=18% Similarity=0.326 Sum_probs=63.2
Q ss_pred CCCCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECCCC
Q 022356 209 KPPSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWPAA 280 (298)
Q Consensus 209 ~~~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp~~ 280 (298)
....|.++.|.| ||+|.+|+..|+++|..++||..+.||+..+.++|..+ ++.+.|.++|..+ |.+.+++..
T Consensus 11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 87 (95)
T 2kkh_A 11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG 87 (95)
T ss_dssp CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence 445678889999 99999999999999999999999999999999999864 5788999999987 888776543
No 26
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.05 E-value=4.3e-10 Score=76.62 Aligned_cols=59 Identities=24% Similarity=0.410 Sum_probs=53.0
Q ss_pred EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cC
Q 022356 215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KN 273 (298)
Q Consensus 215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~ 273 (298)
+++|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ .+.+.|.++|+++ |.
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~ 64 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQE 64 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCC
Confidence 457899 99999999999999999999999999999999999864 5788899999886 64
No 27
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.05 E-value=3.2e-10 Score=79.31 Aligned_cols=59 Identities=27% Similarity=0.487 Sum_probs=52.7
Q ss_pred EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCee
Q 022356 215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQ 275 (298)
Q Consensus 215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Ae 275 (298)
+++|.| ||+|++|+.+|+++|.++ ||..+.+|+..++++|.++.+ +.|.++|+++ |.+.
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~ 62 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVE 62 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCcee
Confidence 367999 999999999999999999 999999999999999998755 8888899886 7653
No 28
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.03 E-value=4.3e-10 Score=77.96 Aligned_cols=60 Identities=18% Similarity=0.432 Sum_probs=53.8
Q ss_pred EEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec--CCHHHHHHHHHhh-cCeeE
Q 022356 217 VLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD--VTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 217 vLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~--vdp~eLlkaL~Kl-K~Ael 276 (298)
.|.| ||+|++|+.+|+++|.+++||..+.||+..++++|..+ .+.+.|.++|+++ |.+.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEe
Confidence 5889 99999999999999999999999999999999999854 5788999999987 76654
No 29
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.03 E-value=5.5e-10 Score=76.42 Aligned_cols=62 Identities=23% Similarity=0.489 Sum_probs=55.0
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCe
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNA 274 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~A 274 (298)
++++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|+.+ |.+
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL 68 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 56678999 99999999999999999999999999999999999853 5778899999886 654
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.02 E-value=7.7e-10 Score=77.39 Aligned_cols=63 Identities=21% Similarity=0.460 Sum_probs=55.5
Q ss_pred eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeE
Q 022356 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQF 276 (298)
Q Consensus 214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Ael 276 (298)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|..+ ++.+.|.++|+.+ |.+.+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL 71 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence 4568999 99999999999999999999999999999999999864 4568899999887 77654
No 31
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.01 E-value=1.1e-09 Score=87.34 Aligned_cols=70 Identities=17% Similarity=0.400 Sum_probs=62.0
Q ss_pred eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeECCCCccC
Q 022356 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFWPAAAAA 283 (298)
Q Consensus 214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelwp~~~~~ 283 (298)
.++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|.. .++++.|.++|+.+ |.+.++......
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~ 148 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQDSI 148 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSSSC
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCccccc
Confidence 5688999 9999999999999999999999999999999999985 46889999999997 988887554433
No 32
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.00 E-value=1.2e-09 Score=86.51 Aligned_cols=64 Identities=20% Similarity=0.422 Sum_probs=57.9
Q ss_pred eEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeEC
Q 022356 214 QVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFW 277 (298)
Q Consensus 214 qtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelw 277 (298)
.++.|.| ||+|++|+.+|+++|.+++||..+.||+..++++|..+ +++++|.++|+++ |.++++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence 4678999 99999999999999999999999999999999999864 6789999999987 877654
No 33
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.99 E-value=8.7e-10 Score=77.69 Aligned_cols=63 Identities=25% Similarity=0.585 Sum_probs=52.3
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCe--eECCC
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNA--QFWPA 279 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~A--elwp~ 279 (298)
+++++|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|.++.+ .+.|+++ |.+ +.|++
T Consensus 2 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~~~~~~ 68 (71)
T 2aj0_A 2 AEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHLKIIPE 68 (71)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTCEEECC
T ss_pred CeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcccccCCc
Confidence 35778999 9999999999999999999999999999999999998765 3456665 643 44544
No 34
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.98 E-value=3.1e-09 Score=83.50 Aligned_cols=66 Identities=23% Similarity=0.398 Sum_probs=59.0
Q ss_pred CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeEC
Q 022356 212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFW 277 (298)
Q Consensus 212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelw 277 (298)
.|++++|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+ ++.+.|.++|+.+ |.+...
T Consensus 6 ~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (111)
T 2ofg_X 6 PLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP 76 (111)
T ss_dssp CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC
T ss_pred cceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec
Confidence 477889999 99999999999999999999999999999999999864 5788999999987 876543
No 35
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.92 E-value=2.5e-09 Score=95.70 Aligned_cols=67 Identities=21% Similarity=0.495 Sum_probs=62.0
Q ss_pred eEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCCC
Q 022356 214 QVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPAA 280 (298)
Q Consensus 214 qtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~~ 280 (298)
.+++|+|.|+|++|+.+|+++|.+++||.++.||+..++++|.+.+++++|.++|+++ |.++++...
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~ 73 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG 73 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCS
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCC
Confidence 4667888999999999999999999999999999999999999989999999999998 999887654
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.84 E-value=1.1e-08 Score=86.90 Aligned_cols=67 Identities=18% Similarity=0.410 Sum_probs=59.4
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cCeeECCC
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KNAQFWPA 279 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~Aelwp~ 279 (298)
..++.|.| ||+|.+|+.+|+++|.+++||..+.||+..++++|..+ ++.+.|.++|+++ |.+.++..
T Consensus 121 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 121 CSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp CEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred ceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 35789999 99999999999999999999999999999999999853 6889999999987 98888653
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.82 E-value=1.4e-08 Score=80.37 Aligned_cols=65 Identities=22% Similarity=0.388 Sum_probs=58.6
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCeeEC
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQFW 277 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Aelw 277 (298)
|++++|.| ||+|.+|+.+|+++|.+++||..+.||+..+++.|.. .++.+.|.++|++. |.+.+.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 78899999 9999999999999999999999999999999999975 36788999999987 877654
No 38
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.78 E-value=1e-08 Score=93.55 Aligned_cols=67 Identities=21% Similarity=0.495 Sum_probs=61.5
Q ss_pred ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh-cCeeECCC
Q 022356 213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV-KNAQFWPA 279 (298)
Q Consensus 213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl-K~Aelwp~ 279 (298)
..+++|.|.|+|++|+.+|+++|.+++||..+.||+.+++++|.+.+++++|.++|+++ |.+.++..
T Consensus 6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~ 73 (249)
T 1jk9_B 6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA 73 (249)
T ss_dssp CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEE
T ss_pred ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccC
Confidence 35678888999999999999999999999999999999999999989999999999998 98888653
No 39
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.59 E-value=8.5e-08 Score=81.51 Aligned_cols=61 Identities=23% Similarity=0.513 Sum_probs=53.4
Q ss_pred CCceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh
Q 022356 211 PSNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV 271 (298)
Q Consensus 211 ~~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl 271 (298)
..+.+++|.| ||+|.+|+.+|+++|..++||..+.||+..++++|..+ ++++.|.++|+.+
T Consensus 17 ~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 17 SHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL 81 (202)
T ss_dssp ---CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred CccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 3467788999 99999999999999999999999999999999999853 6788899999875
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.45 E-value=4.7e-07 Score=72.09 Aligned_cols=62 Identities=26% Similarity=0.557 Sum_probs=54.3
Q ss_pred CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEec---CCHHHHHHHHHhh-cC
Q 022356 212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD---VTPLSVLASISKV-KN 273 (298)
Q Consensus 212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~---vdp~eLlkaL~Kl-K~ 273 (298)
.++++.|.| ||+|.+|+.+|+++|..++||..+.+++..+++.|..+ ++...|.++|+.. |.
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~ 70 (151)
T 1p6t_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYH 70 (151)
T ss_dssp CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCE
T ss_pred cceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCc
Confidence 456778999 99999999999999999999999999999999999743 5778888888876 53
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.30 E-value=1e-06 Score=90.10 Aligned_cols=61 Identities=13% Similarity=0.278 Sum_probs=55.8
Q ss_pred EEEEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEe---cCCHHHHHHHHHhh-cCee
Q 022356 215 VVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVG---DVTPLSVLASISKV-KNAQ 275 (298)
Q Consensus 215 tVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G---~vdp~eLlkaL~Kl-K~Ae 275 (298)
+++|+| ||+|++|+.+|+++|.+++||.++.||+.+++++|+. .++.++|.++|++. |.+.
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~ 68 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV 68 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence 468999 9999999999999999999999999999999999985 36899999999997 7764
No 42
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=73.79 E-value=2.6 Score=33.07 Aligned_cols=36 Identities=19% Similarity=0.429 Sum_probs=27.7
Q ss_pred EEEEEEeecchhh------HHHHHHHh-hccCCcceeEEecCC
Q 022356 215 VVVLRVSLHCKGC------EGKVRKHL-SRMKGVSSFNIDFAA 250 (298)
Q Consensus 215 tVvLkVgM~C~gC------a~KIeKAL-~kIeGVesV~VDl~s 250 (298)
.+.+.+.++..+| ...|+.+| ..++||.+|.|++.-
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 4566666777776 56789999 899999999887643
No 43
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=71.33 E-value=3.4 Score=31.97 Aligned_cols=35 Identities=31% Similarity=0.623 Sum_probs=27.8
Q ss_pred EEEEEEeecchhhH------HHHHHHhhccCCcceeEEecC
Q 022356 215 VVVLRVSLHCKGCE------GKVRKHLSRMKGVSSFNIDFA 249 (298)
Q Consensus 215 tVvLkVgM~C~gCa------~KIeKAL~kIeGVesV~VDl~ 249 (298)
.+.|.+.+++.+|. ..|+.+|..++||..|.|++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 56677777777774 578999999999999988754
No 44
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=66.36 E-value=3.8 Score=31.61 Aligned_cols=35 Identities=11% Similarity=0.414 Sum_probs=26.1
Q ss_pred EEEEEEeecchhhH------HHHHHHhhccCCcceeEEecC
Q 022356 215 VVVLRVSLHCKGCE------GKVRKHLSRMKGVSSFNIDFA 249 (298)
Q Consensus 215 tVvLkVgM~C~gCa------~KIeKAL~kIeGVesV~VDl~ 249 (298)
.+.|.+.+++.+|. ..|+.+|..++||..|.|++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 45666666666663 568999999999999988753
No 45
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=62.15 E-value=20 Score=30.99 Aligned_cols=53 Identities=15% Similarity=0.334 Sum_probs=41.3
Q ss_pred eEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCC---------------EEEEEec---CCHHHHHHHHHhh
Q 022356 214 QVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAK---------------KVTVVGD---VTPLSVLASISKV 271 (298)
Q Consensus 214 qtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~sk---------------kVtV~G~---vdp~eLlkaL~Kl 271 (298)
++.+|- +||=+-++..+.+++||.++.+-+..| .|.|+.+ ++-++|++..-..
T Consensus 3 e~A~fa-----gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~~ 73 (168)
T 4gwb_A 3 KRAVLA-----GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQI 73 (168)
T ss_dssp EEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHHH
T ss_pred eEEEEE-----ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHhh
Confidence 455564 688888999999999999999999776 4556653 7888888877653
No 46
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=61.51 E-value=20 Score=27.94 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=32.7
Q ss_pred hhHHHHHHHhhccCCcceeEEecCCCEEEEEec-CCHHHHHHHHHhh
Q 022356 226 GCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGD-VTPLSVLASISKV 271 (298)
Q Consensus 226 gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~-vdp~eLlkaL~Kl 271 (298)
+=...|.++|.+++||+-..++-..+++.|+-+ -+.++|.+.|.++
T Consensus 17 ~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 17 ERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp TSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 557899999999999954455677888887632 3556666666543
No 47
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=59.05 E-value=22 Score=31.63 Aligned_cols=56 Identities=25% Similarity=0.292 Sum_probs=43.6
Q ss_pred CCceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCE-------------------EEEEec---CCHHHHHHHH
Q 022356 211 PSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKK-------------------VTVVGD---VTPLSVLASI 268 (298)
Q Consensus 211 ~~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skk-------------------VtV~G~---vdp~eLlkaL 268 (298)
..+++++|- +||=+-++..+.+++||.++.+-+..+. |.|+.+ ++-++|++..
T Consensus 41 ~~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F 115 (199)
T 1fvg_A 41 EGTQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVF 115 (199)
T ss_dssp TTCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred CCceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 456777775 6888888999999999999999987765 556654 6788888877
Q ss_pred Hhh
Q 022356 269 SKV 271 (298)
Q Consensus 269 ~Kl 271 (298)
-+.
T Consensus 116 ~~~ 118 (199)
T 1fvg_A 116 WEN 118 (199)
T ss_dssp HHT
T ss_pred HHh
Confidence 553
No 48
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=57.71 E-value=9.8 Score=30.72 Aligned_cols=59 Identities=25% Similarity=0.296 Sum_probs=42.0
Q ss_pred CceEEEEEE-eecchhhHHHHHHHhhccCCcceeEE-----ecCCC--EEEEEec-CCHHHHHHHHHhh
Q 022356 212 SNQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNI-----DFAAK--KVTVVGD-VTPLSVLASISKV 271 (298)
Q Consensus 212 ~mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~V-----Dl~sk--kVtV~G~-vdp~eLlkaL~Kl 271 (298)
....++|.| .-+= --.-.+-++|.+++||..|.+ |..+. +++|+|. ++.++|.++|++.
T Consensus 5 ~iRRlVLDVlKPh~-P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~ 72 (100)
T 3bpd_A 5 GLRRLVLDVLKPHE-PKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDM 72 (100)
T ss_dssp SEEEEEEEEEEESC-SCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTT
T ss_pred cceEEEEEecCCCC-CCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHc
Confidence 356677877 3333 344578889999999988765 33443 3555675 9999999999986
No 49
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=56.78 E-value=14 Score=29.67 Aligned_cols=58 Identities=26% Similarity=0.296 Sum_probs=41.2
Q ss_pred ceEEEEEE-eecchhhHHHHHHHhhccCCcceeEE-----ecCCCE--EEEEec-CCHHHHHHHHHhh
Q 022356 213 NQVVVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNI-----DFAAKK--VTVVGD-VTPLSVLASISKV 271 (298)
Q Consensus 213 mqtVvLkV-gM~C~gCa~KIeKAL~kIeGVesV~V-----Dl~skk--VtV~G~-vdp~eLlkaL~Kl 271 (298)
...++|.| .-|= --.-.+-++|.+++||..|.+ |..+.. ++|+|. ++.++|.++|++.
T Consensus 6 irRlVLDVlKPh~-p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~ 72 (97)
T 2raq_A 6 LIRIVLDILKPHE-PIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESY 72 (97)
T ss_dssp EEEEEEEEECCSC-SCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHT
T ss_pred ceEEEEEecCCCC-CCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHc
Confidence 45677777 3333 334467888999999987764 445544 555675 9999999999986
No 50
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=56.78 E-value=15 Score=29.49 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=41.2
Q ss_pred ceEEEEEE--eecchhhHHHHHHHhhccCCcceeEE-----ecCCC--EEEEEec-CCHHHHHHHHHhh
Q 022356 213 NQVVVLRV--SLHCKGCEGKVRKHLSRMKGVSSFNI-----DFAAK--KVTVVGD-VTPLSVLASISKV 271 (298)
Q Consensus 213 mqtVvLkV--gM~C~gCa~KIeKAL~kIeGVesV~V-----Dl~sk--kVtV~G~-vdp~eLlkaL~Kl 271 (298)
...++|.| .+|=.. .-.+-++|.+++||..|.+ |..+. +++|+|. ++.++|.++|++.
T Consensus 4 irRlVLDVlKP~h~P~-ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~ 71 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTS-IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEE 71 (96)
T ss_dssp EEEEEEEEEEESSSSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHT
T ss_pred eEEEEEEcccCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHc
Confidence 45567777 445443 3467889999999988765 33443 3555685 9999999999986
No 51
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=56.50 E-value=23 Score=32.88 Aligned_cols=56 Identities=20% Similarity=0.274 Sum_probs=43.7
Q ss_pred CCceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCE-------------------EEEEec---CCHHHHHHHH
Q 022356 211 PSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKK-------------------VTVVGD---VTPLSVLASI 268 (298)
Q Consensus 211 ~~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skk-------------------VtV~G~---vdp~eLlkaL 268 (298)
..+++++|- +||=+-+|..+.+++||.++.|-+..|. |.|+.+ ++-++|++..
T Consensus 92 ~~~e~a~fA-----gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~F 166 (261)
T 2j89_A 92 PGQQFAQFG-----AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVL 166 (261)
T ss_dssp TTCEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred CCCeEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 456777775 6888889999999999999999987764 666654 6778888876
Q ss_pred Hhh
Q 022356 269 SKV 271 (298)
Q Consensus 269 ~Kl 271 (298)
-+.
T Consensus 167 w~~ 169 (261)
T 2j89_A 167 WAR 169 (261)
T ss_dssp HHH
T ss_pred HHh
Confidence 553
No 52
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=54.80 E-value=23 Score=31.29 Aligned_cols=54 Identities=22% Similarity=0.307 Sum_probs=40.9
Q ss_pred ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCE-------------------EEEEec---CCHHHHHHHHHh
Q 022356 213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKK-------------------VTVVGD---VTPLSVLASISK 270 (298)
Q Consensus 213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skk-------------------VtV~G~---vdp~eLlkaL~K 270 (298)
|++++|- +||=+-++..+.+++||.++.+-+..|. |.|+.+ ++-++|++..-+
T Consensus 2 ~~~a~fa-----gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~ 76 (193)
T 3bqh_A 2 TRTIYLA-----GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFR 76 (193)
T ss_dssp EEEEEEE-----ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHH
T ss_pred ccEEEEe-----cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 3455664 6888888999999999999999887664 556543 788888887765
Q ss_pred h
Q 022356 271 V 271 (298)
Q Consensus 271 l 271 (298)
.
T Consensus 77 ~ 77 (193)
T 3bqh_A 77 V 77 (193)
T ss_dssp H
T ss_pred h
Confidence 4
No 53
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=51.03 E-value=33 Score=30.75 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=43.1
Q ss_pred CCceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCE-------------------EEEEec---CCHHHHHHHH
Q 022356 211 PSNQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKK-------------------VTVVGD---VTPLSVLASI 268 (298)
Q Consensus 211 ~~mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skk-------------------VtV~G~---vdp~eLlkaL 268 (298)
..+++++|- +||=+-++..+.+++||.++.+-+..+. |.|+.+ ++-++|++..
T Consensus 40 ~~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F 114 (211)
T 1ff3_A 40 DGMEIAIFA-----MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVF 114 (211)
T ss_dssp TTCEEEEEE-----CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred CCceEEEEe-----cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHH
Confidence 456777775 7888888999999999999999887542 556653 6788888877
Q ss_pred Hhh
Q 022356 269 SKV 271 (298)
Q Consensus 269 ~Kl 271 (298)
-+.
T Consensus 115 ~~~ 117 (211)
T 1ff3_A 115 WEN 117 (211)
T ss_dssp HHS
T ss_pred HHh
Confidence 653
No 54
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=50.65 E-value=29 Score=32.90 Aligned_cols=54 Identities=26% Similarity=0.354 Sum_probs=42.8
Q ss_pred ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCCE-----------------EEEEec---CCHHHHHHHHHhh
Q 022356 213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKK-----------------VTVVGD---VTPLSVLASISKV 271 (298)
Q Consensus 213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~skk-----------------VtV~G~---vdp~eLlkaL~Kl 271 (298)
|++++|. +||=+-++..+.+++||.++.+-+..+. |.|+.+ ++-++|++..-+.
T Consensus 2 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~~ 75 (313)
T 3e0m_A 2 MAEIYLA-----GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRV 75 (313)
T ss_dssp CEEEEEE-----CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred ccEEEEe-----cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHhh
Confidence 5667775 7889999999999999999999997764 556653 7888888877654
No 55
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=49.66 E-value=43 Score=29.88 Aligned_cols=54 Identities=20% Similarity=0.318 Sum_probs=41.1
Q ss_pred ceEEEEEEeecchhhHHHHHHHhhccCCcceeEEecCCC---------------EEEEEec---CCHHHHHHHHHhh
Q 022356 213 NQVVVLRVSLHCKGCEGKVRKHLSRMKGVSSFNIDFAAK---------------KVTVVGD---VTPLSVLASISKV 271 (298)
Q Consensus 213 mqtVvLkVgM~C~gCa~KIeKAL~kIeGVesV~VDl~sk---------------kVtV~G~---vdp~eLlkaL~Kl 271 (298)
+++++|- +||=+-++..+.+++||.++.+-+..| .|.|+.+ ++-++|++..-+.
T Consensus 25 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~~ 96 (203)
T 1nwa_A 25 NQKAILA-----GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQI 96 (203)
T ss_dssp CEEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHHH
T ss_pred cceEEEe-----cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHHh
Confidence 4566674 688888899999999999999988776 2445543 7788888877553
No 56
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=44.82 E-value=40 Score=29.69 Aligned_cols=57 Identities=12% Similarity=0.264 Sum_probs=42.6
Q ss_pred CCCceEEEEEEeecchhhHHHHHHHhhcc--CCcceeEEecCCC--E-----------------------EEEEec---C
Q 022356 210 PPSNQVVVLRVSLHCKGCEGKVRKHLSRM--KGVSSFNIDFAAK--K-----------------------VTVVGD---V 259 (298)
Q Consensus 210 ~~~mqtVvLkVgM~C~gCa~KIeKAL~kI--eGVesV~VDl~sk--k-----------------------VtV~G~---v 259 (298)
...+++++|- +||=+-++..+.++ +||.++.+-+..+ . |.|+.+ +
T Consensus 16 p~~~~~a~fa-----gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~i 90 (187)
T 3pim_A 16 PAKDKLITLA-----CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVI 90 (187)
T ss_dssp TTTCEEEEEE-----SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTS
T ss_pred CCCCcEEEEe-----cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccC
Confidence 3556788885 78888899999999 9999999888766 2 445543 6
Q ss_pred CHHHHHHHHHhh
Q 022356 260 TPLSVLASISKV 271 (298)
Q Consensus 260 dp~eLlkaL~Kl 271 (298)
+-++|++..-+.
T Consensus 91 sy~~LL~~Ff~~ 102 (187)
T 3pim_A 91 TLRELTDFFFRI 102 (187)
T ss_dssp CHHHHHHHHTTS
T ss_pred CHHHHHHHHHHh
Confidence 778888776543
No 57
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.43 E-value=1.2e+02 Score=21.73 Aligned_cols=53 Identities=15% Similarity=-0.035 Sum_probs=39.3
Q ss_pred EEEE-eecchhhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHh
Q 022356 217 VLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISK 270 (298)
Q Consensus 217 vLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~K 270 (298)
+|-| ++.-.--...|++.+.....|..|.+....+-+-|+.. +.+...++|+.
T Consensus 17 ~l~V~nlp~~~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~-~~~~a~~a~~~ 70 (99)
T 2cpj_A 17 RLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLE-TRTLAEIAKVE 70 (99)
T ss_dssp EEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECS-SSHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHhhcCCeEEEEEecCCCEEEEEEC-CHHHHHHHHHH
Confidence 4556 77766778899999999988999999877788888875 33444445544
No 58
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=33.84 E-value=1.3e+02 Score=23.37 Aligned_cols=58 Identities=14% Similarity=0.195 Sum_probs=37.3
Q ss_pred ceEEEEEEe---ecch-hhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh
Q 022356 213 NQVVVLRVS---LHCK-GCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV 271 (298)
Q Consensus 213 mqtVvLkVg---M~C~-gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl 271 (298)
....+|+|+ |-+- |=..+.-+.|.+..||.+++++-.+++|+|.|. +.+.+.+|...+
T Consensus 14 ~~i~~i~I~~dkIg~vIG~gGk~Ik~I~e~tGv~~IdI~eddG~V~I~g~-~~ea~~~A~~~I 75 (91)
T 2cpq_A 14 AFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIYGE-SADAVKKARGFL 75 (91)
T ss_dssp SEEEEEECCHHHHHHHHTTTTHHHHHHHTSTTEEEEEEETTTTEEEEEES-SHHHHHHHHHHH
T ss_pred ceEEEEEEChHHhhhhcCCCcHHHHHHHHHhCCeEEEEEcCCCEEEEEEC-CHHHHHHHHHHH
Confidence 345566662 2221 223344555556679976888766799999884 677777777766
No 59
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=29.44 E-value=1.6e+02 Score=21.14 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=19.0
Q ss_pred EEEEE-eecchhhHHHH---HHHhhccCCcceeEEec
Q 022356 216 VVLRV-SLHCKGCEGKV---RKHLSRMKGVSSFNIDF 248 (298)
Q Consensus 216 VvLkV-gM~C~gCa~KI---eKAL~kIeGVesV~VDl 248 (298)
+.+.. .-.|+.|..-+ ++.....++|.-+.|+.
T Consensus 28 ~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~ 64 (136)
T 1zzo_A 28 AVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAG 64 (136)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred EEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeC
Confidence 44444 88999997643 33333444565555554
No 60
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=29.14 E-value=90 Score=23.59 Aligned_cols=35 Identities=11% Similarity=0.218 Sum_probs=20.6
Q ss_pred EEEEEE-eecchhhHHHH------HHHhhccCCcceeEEecC
Q 022356 215 VVVLRV-SLHCKGCEGKV------RKHLSRMKGVSSFNIDFA 249 (298)
Q Consensus 215 tVvLkV-gM~C~gCa~KI------eKAL~kIeGVesV~VDl~ 249 (298)
.+.+.. .-.|+.|..-. .+.....+||.-+.||..
T Consensus 33 ~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~ 74 (134)
T 2fwh_A 33 PVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 74 (134)
T ss_dssp CEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECT
T ss_pred cEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCC
Confidence 344555 77899998643 222334556666666653
No 61
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.64 E-value=1.6e+02 Score=23.69 Aligned_cols=57 Identities=11% Similarity=0.061 Sum_probs=42.3
Q ss_pred EEEEEE-eecch-hhHHHHHHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHHhh
Q 022356 215 VVVLRV-SLHCK-GCEGKVRKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASISKV 271 (298)
Q Consensus 215 tVvLkV-gM~C~-gCa~KIeKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~Kl 271 (298)
=++|.| ++.-. -+...|+.++.....|..|.+.....+.-|....++.+-.++|+++
T Consensus 18 G~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 18 GCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred CeEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 356788 67666 7899999999998889888887777777788765345555555553
No 62
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=22.88 E-value=2.1e+02 Score=20.47 Aligned_cols=55 Identities=15% Similarity=0.020 Sum_probs=38.2
Q ss_pred EEEEE-eecchhhHHHHHHHhhccCCcceeEEecC-----CCEEEEEecCCHHHHHHHHHhh
Q 022356 216 VVLRV-SLHCKGCEGKVRKHLSRMKGVSSFNIDFA-----AKKVTVVGDVTPLSVLASISKV 271 (298)
Q Consensus 216 VvLkV-gM~C~gCa~KIeKAL~kIeGVesV~VDl~-----skkVtV~G~vdp~eLlkaL~Kl 271 (298)
..|-| ++.-.--...|+..+.....|..|.+-.. .+-+-|+.. +.+...++|+.+
T Consensus 16 ~~l~v~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~-~~~~A~~Ai~~l 76 (105)
T 2dnh_A 16 RKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFS-SHTEAQAAIHAL 76 (105)
T ss_dssp CEEEEESCCTTCCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEES-SHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeC-CHHHHHHHHHHH
Confidence 35567 78777788899999999888988887554 233445544 566666777654
No 63
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=21.69 E-value=96 Score=22.39 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=24.3
Q ss_pred eEEEEEEeecchhhH-----HHHHHHhhccCCcceeEEecCC
Q 022356 214 QVVVLRVSLHCKGCE-----GKVRKHLSRMKGVSSFNIDFAA 250 (298)
Q Consensus 214 qtVvLkVgM~C~gCa-----~KIeKAL~kIeGVesV~VDl~s 250 (298)
.++++=..-.|+.|. .++++.|... ||.-..+|+..
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~~ 42 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDGK-RIQYQLVDISQ 42 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETTS
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHHC-CCceEEEECCC
Confidence 344444466899997 7888888764 77655566543
No 64
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=21.35 E-value=31 Score=27.96 Aligned_cols=38 Identities=11% Similarity=0.210 Sum_probs=26.0
Q ss_pred HHHhhccCCcceeEEecCCCEEEEEecCCHHHHHHHHH
Q 022356 232 RKHLSRMKGVSSFNIDFAAKKVTVVGDVTPLSVLASIS 269 (298)
Q Consensus 232 eKAL~kIeGVesV~VDl~skkVtV~G~vdp~eLlkaL~ 269 (298)
..+|..+..+..++|....+.|+++|.++...-.+.++
T Consensus 67 ~~aL~~~~~l~~i~V~V~~g~VtLsG~v~s~~~r~~a~ 104 (132)
T 2kgs_A 67 EPVFTASVPIPDFGLKVERDTVTLTGTAPSSEHKDAVK 104 (132)
T ss_dssp HHHHHHHTTCTTCEEEEEETEEEEECEESSHHHHHHHH
T ss_pred HHHHHhcCcCCceEEEEECCEEEEEEEECCHHHHHHHH
Confidence 45665555556778888999999999876554444443
Done!